BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00018792
         (1007 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   419   e-115
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...   417   e-114
gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis]     410   e-112
ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prun...   410   e-112
ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citr...   408   e-111
ref|XP_007048085.1| Tetratricopeptide repeat (TPR)-like superfam...   407   e-111
ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi...   405   e-110
ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containi...   405   e-110
ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containi...   400   e-109
ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containi...   400   e-109
ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi...   391   e-106
ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containi...   388   e-105
ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containi...   387   e-105
ref|XP_002306340.2| pentatricopeptide repeat-containing family p...   386   e-105
gb|EYU31068.1| hypothetical protein MIMGU_mgv1a024034mg [Mimulus...   385   e-104
ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containi...   382   e-103
ref|XP_003630096.1| Pentatricopeptide repeat-containing protein ...   379   e-102
ref|XP_006843693.1| hypothetical protein AMTR_s00007p00203740 [A...   375   e-101
ref|XP_006411755.1| hypothetical protein EUTSA_v10024997mg [Eutr...   371   e-100
ref|XP_004953934.1| PREDICTED: pentatricopeptide repeat-containi...   370   e-100

>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Vitis vinifera]
            gi|296082481|emb|CBI21486.3| unnamed protein product
            [Vitis vinifera]
          Length = 489

 Score =  419 bits (1078), Expect = e-115
 Identities = 209/277 (75%), Positives = 238/277 (85%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA A+N++Q NALFK+L+E I+SPDI+T+NGVMDAYGKNGM++EMESVLSRMK+
Sbjct: 213  NILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKS 272

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ KPDIITFN+LIDSYGRRQ+FDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARL+EK
Sbjct: 273  NQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEK 332

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE+VFKKMTDMGY P+++TYESLI  YGFCDC+SRAREIFDE+  S KE++VSTLNAML+
Sbjct: 333  AENVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLE 392

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYCMNGLP EADLL E    N   P +STYKLL KAYTKA+ KELL+KLLK MD DGI+P
Sbjct: 393  VYCMNGLPMEADLLLERARKNRPFPGSSTYKLLYKAYTKADQKELLEKLLKLMDSDGILP 452

Query: 722  NKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 832
            NK+FFLEALGAFGSS A  ES          +  AKT
Sbjct: 453  NKRFFLEALGAFGSSPASQESAGSTTGLTRPRNSAKT 489



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 46/214 (21%), Positives = 98/214 (45%), Gaps = 7/214 (3%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSL- 280
           Y+ ++   GK G  R    + S M+ +  +PD   +N LI ++   +D  K + + K+L 
Sbjct: 137 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRD--KSKALIKALG 194

Query: 281 ----LRSKE--KPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTY 442
               ++  E  KP + T+N ++  + +A+   +A ++FK++ +   +P   T+  ++  Y
Sbjct: 195 YFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAY 254

Query: 443 GFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHA 622
           G    +     +   +  +  +  + T N ++D Y       + + +F+ +  +   P  
Sbjct: 255 GKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTL 314

Query: 623 STYKLLCKAYTKANMKELLQKLLKYMDKDGIVPN 724
            T+  +   Y KA +KE  + + K M   G  PN
Sbjct: 315 PTFNSMITNYGKARLKEKAENVFKKMTDMGYAPN 348



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 47/199 (23%), Positives = 89/199 (44%), Gaps = 5/199 (2%)
 Frame = +2

Query: 209 FNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNY----GKARLREKAESVF 376
           ++ LI   G++        +F  +  S  +P    +N++IT +     K++   KA   F
Sbjct: 137 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALIKALGYF 196

Query: 377 KKMTDMGYT-PSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCM 553
            KM  M    P+ VTY  L+  +     V++A  +F E+ ES     + T N ++D Y  
Sbjct: 197 DKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVMDAYGK 256

Query: 554 NGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVPNKKF 733
           NG+  E + +   M SN   P   T+ +L  +Y +    + ++++ K + +    P    
Sbjct: 257 NGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEKPTLPT 316

Query: 734 FLEALGAFGSSRAGSESNN 790
           F   +  +G +R   ++ N
Sbjct: 317 FNSMITNYGKARLKEKAEN 335


>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  417 bits (1071), Expect = e-114
 Identities = 205/268 (76%), Positives = 239/268 (89%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA ARN++QVNALFKDLD+ I+SPDIYTYNGVMDAYGKNGM+REMESVLSRMK+
Sbjct: 211  NILLRAFAQARNVNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKS 270

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ KPDIITFNLLIDSYG++QDFDKMEQVFKSLL SKE+PTLPTFNSMITNYGKAR +E 
Sbjct: 271  NQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKEN 330

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AESV +KMT M YTP+++TYESLI  YGFCD VS+AREIFD++ ESGKE++VSTLNAMLD
Sbjct: 331  AESVLQKMTKMKYTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLD 390

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYC+NGLP EADLLF+   + GLLP ++TYKLL KAYTKANMK+L+QKLLK+MD+DGI+P
Sbjct: 391  VYCLNGLPMEADLLFDNARNVGLLPDSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIP 450

Query: 722  NKKFFLEALGAFGSSRAGSESNNREARS 805
            NK+FFL+ALGAF S  A S +    A++
Sbjct: 451  NKRFFLDALGAFKSLPASSGNQQNNAKT 478



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 46/218 (21%), Positives = 96/218 (44%), Gaps = 7/218 (3%)
 Frame = +2

Query: 92  DIYTYNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDKMEQVF 271
           D   Y+ ++   GK G  R    + S M+ +  +PD   +N LI ++   +D  K + + 
Sbjct: 131 DSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDSSVYNALITAHLHSKD--KAKALI 188

Query: 272 KSL-----LRSKEK--PTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESL 430
           K+L     ++  ++  P + T+N ++  + +AR   +  ++FK +     +P   TY  +
Sbjct: 189 KALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQVNALFKDLDQSIVSPDIYTYNGV 248

Query: 431 ITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGL 610
           +  YG    +     +   +  +  +  + T N ++D Y       + + +F+ +  +  
Sbjct: 249 MDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLIDSYGKKQDFDKMEQVFKSLLHSKE 308

Query: 611 LPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVPN 724
            P   T+  +   Y KA  KE  + +L+ M K    PN
Sbjct: 309 RPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTPN 346


>gb|EXB80843.1| hypothetical protein L484_020101 [Morus notabilis]
          Length = 485

 Score =  410 bits (1055), Expect = e-112
 Identities = 204/277 (73%), Positives = 239/277 (86%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA ARN+ +VN+LFKDLD  I+SPDIYTYNGVMDAYGKNGM+REMESVLS MK+
Sbjct: 209  NILLRAFAQARNVQRVNSLFKDLDGSIVSPDIYTYNGVMDAYGKNGMIREMESVLSLMKS 268

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            N  KPDIITFNLLIDSYG++Q+FDKMEQVFKSLLRSKE+PTLPTFNSMI NYGKAR  +K
Sbjct: 269  NHIKPDIITFNLLIDSYGKKQEFDKMEQVFKSLLRSKERPTLPTFNSMIINYGKARRLDK 328

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE+VF+KMTDMGYTPS++TYESLI  YG+CDCVSRA++IF+ + ESGK+++VSTLNAMLD
Sbjct: 329  AENVFEKMTDMGYTPSFITYESLIMMYGYCDCVSRAQDIFNRLVESGKDIKVSTLNAMLD 388

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYCMNGLP EA  LFE   + G++P++STYKLL KAYTKANMKELL  LL++M+KDGIVP
Sbjct: 389  VYCMNGLPMEAHKLFEDSKNIGVVPNSSTYKLLYKAYTKANMKELLGNLLRHMEKDGIVP 448

Query: 722  NKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 832
            NK+FFLEALGAF SS A   S +  A S+  +   KT
Sbjct: 449  NKRFFLEALGAFCSSNASPVSMSATAASSRPENSVKT 485



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
 Frame = +2

Query: 209 FNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNY----GKARLREKAESVF 376
           ++ LI   G++        +F  +  S  +P    +N++IT +     K +  +KA   F
Sbjct: 133 YSKLISVMGKKGQTRMAMWLFSEMRNSSCRPDTSVYNALITAHLHSSDKVKALDKAIGYF 192

Query: 377 KKMTDMGYT-PSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCM 553
           +KM  +    P+ VTY  L+  +     V R   +F ++  S     + T N ++D Y  
Sbjct: 193 EKMKGIERCKPNIVTYNILLRAFAQARNVQRVNSLFKDLDGSIVSPDIYTYNGVMDAYGK 252

Query: 554 NGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVPNKKF 733
           NG+  E + +   M SN + P   T+ LL  +Y K    + ++++ K + +    P    
Sbjct: 253 NGMIREMESVLSLMKSNHIKPDIITFNLLIDSYGKKQEFDKMEQVFKSLLRSKERPTLPT 312

Query: 734 FLEALGAFGSSRAGSESNN 790
           F   +  +G +R   ++ N
Sbjct: 313 FNSMIINYGKARRLDKAEN 331


>ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prunus persica]
            gi|462407886|gb|EMJ13220.1| hypothetical protein
            PRUPE_ppa004899mg [Prunus persica]
          Length = 486

 Score =  410 bits (1053), Expect = e-112
 Identities = 209/277 (75%), Positives = 232/277 (83%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA +RN+++VN+LFKDLDE I SPDIYTYNGVMDAYGKNG +REMESVLS MK+
Sbjct: 210  NILLRAFAQSRNVEKVNSLFKDLDESIASPDIYTYNGVMDAYGKNGNIREMESVLSHMKS 269

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ KPDIITFNLLIDSYG++Q FDKMEQVFKSL+RSKEKPTLPTFNSMI NYGKARL+EK
Sbjct: 270  NQCKPDIITFNLLIDSYGKKQQFDKMEQVFKSLVRSKEKPTLPTFNSMIINYGKARLKEK 329

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE VFKKM DM YTPS++TYESLI  YGFCD VS+ARE+FD + +SGKEL+VSTLNAMLD
Sbjct: 330  AEDVFKKMIDMKYTPSFITYESLIMMYGFCDSVSKAREVFDRLADSGKELKVSTLNAMLD 389

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYCMNGLP EAD LF    S G+ P+ STYKLL KAYTKANMKELL+KLLK MDKDGIVP
Sbjct: 390  VYCMNGLPVEADKLFVNGNSIGVRPNVSTYKLLYKAYTKANMKELLEKLLKCMDKDGIVP 449

Query: 722  NKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 832
            NK+FFLEALGAF SS     S       +  Q   KT
Sbjct: 450  NKRFFLEALGAFFSSPGSPGSVTATTGLSRPQDGTKT 486



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 44/204 (21%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQD----FDKMEQVF 271
           Y+ ++   GK G  R    + S M+ +  +PD   +N LI ++   +D     DK  + F
Sbjct: 134 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAHLNSKDKAKALDKALRYF 193

Query: 272 KSLLRSKE-KPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTYGF 448
             +   +  +P + T+N ++  + ++R  EK  S+FK + +   +P   TY  ++  YG 
Sbjct: 194 DKMKGMERCQPNIVTYNILLRAFAQSRNVEKVNSLFKDLDESIASPDIYTYNGVMDAYGK 253

Query: 449 CDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHAST 628
              +     +   +  +  +  + T N ++D Y       + + +F+ +  +   P   T
Sbjct: 254 NGNIREMESVLSHMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVFKSLVRSKEKPTLPT 313

Query: 629 YKLLCKAYTKANMKELLQKLLKYM 700
           +  +   Y KA +KE  + + K M
Sbjct: 314 FNSMIINYGKARLKEKAEDVFKKM 337


>ref|XP_006428072.1| hypothetical protein CICLE_v10025440mg [Citrus clementina]
            gi|568819570|ref|XP_006464322.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Citrus sinensis]
            gi|557530062|gb|ESR41312.1| hypothetical protein
            CICLE_v10025440mg [Citrus clementina]
          Length = 500

 Score =  408 bits (1049), Expect = e-111
 Identities = 205/277 (74%), Positives = 239/277 (86%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRA A ARN+DQVNALFK+LDE I++PDIYTYNGVMDAYGKNGM++EMESVLSRMK+
Sbjct: 224  NILLRACAQARNVDQVNALFKELDESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ KPDIITFNLLIDSYG+RQ FDKMEQVFKSL+ SKEKPTLPTFNSMI NYGKARL+ K
Sbjct: 284  NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE VF+KMT M YTPS++TYE +IT YG+CD VSRAREIFDE+++ GK+++VSTLNAML+
Sbjct: 344  AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
             YCMNGLPTEADLLFE   + G+ P +STYKLL KAYTKANMKEL+QKLLK M+++GIVP
Sbjct: 404  AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463

Query: 722  NKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 832
            NK+FFLEAL  F SS AGS+S + +     S   AK+
Sbjct: 464  NKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTAKS 500



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 5/192 (2%)
 Frame = +2

Query: 209 FNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNY----GKARLREKAESVF 376
           ++ LI   G++        +F  +  S  +P    +N++IT +     KA+   KA   F
Sbjct: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207

Query: 377 KKMTDMGYT-PSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCM 553
           +KM  M    P+ VTY  L+        V +   +F E+ ES     + T N ++D Y  
Sbjct: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELDESILAPDIYTYNGVMDAYGK 267

Query: 554 NGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVPNKKF 733
           NG+  E + +   M SN   P   T+ LL  +Y K    + ++++ K +      P    
Sbjct: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327

Query: 734 FLEALGAFGSSR 769
           F   +  +G +R
Sbjct: 328 FNSMIINYGKAR 339


>ref|XP_007048085.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|590707730|ref|XP_007048086.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508700346|gb|EOX92242.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508700347|gb|EOX92243.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 488

 Score =  407 bits (1046), Expect = e-111
 Identities = 203/261 (77%), Positives = 229/261 (87%)
 Frame = +2

Query: 2   NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
           NILLRAF+ ARN+DQVNALFKDL E II+PDIYTYNGVMDAYGKNGM+REMESVLSRMK+
Sbjct: 207 NILLRAFSQARNVDQVNALFKDLAESIIAPDIYTYNGVMDAYGKNGMIREMESVLSRMKS 266

Query: 182 NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
           NQ KPD ITFN+LIDSYG++Q+FDKMEQVFKSLLRSK+KPTLPTFNSMI NYGKARL+EK
Sbjct: 267 NQCKPDTITFNVLIDSYGKKQEFDKMEQVFKSLLRSKQKPTLPTFNSMIINYGKARLKEK 326

Query: 362 AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
           AE VFKKMTDM Y PS++TYESLI  YGFCDCVSRAREIFD +  SGKE++VSTLNAML+
Sbjct: 327 AEHVFKKMTDMKYVPSFITYESLIMMYGFCDCVSRAREIFDGIVNSGKEMRVSTLNAMLE 386

Query: 542 VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
           VYC NGL  EAD LFE     G++  +STYKLL KAYTKANMK+L+QKL+K M+KDGIVP
Sbjct: 387 VYCRNGLHMEADRLFENAHKMGVIRDSSTYKLLYKAYTKANMKDLMQKLVKQMEKDGIVP 446

Query: 722 NKKFFLEALGAFGSSRAGSES 784
           NK+FFLEAL AFGS  A  +S
Sbjct: 447 NKRFFLEALEAFGSLPASPDS 467



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 45/212 (21%), Positives = 92/212 (43%), Gaps = 5/212 (2%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQD----FDKMEQVF 271
           Y+ ++   GK G  R    + S M+ +  +PD+  +N LI ++   +D     DK    F
Sbjct: 131 YSKLITVMGKKGQTRMAMWLFSEMRNSGCRPDVSVYNALITAHLHSRDKSKALDKAMGYF 190

Query: 272 KSLLRSKE-KPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTYGF 448
             +   +  KP + T+N ++  + +AR  ++  ++FK + +    P   TY  ++  YG 
Sbjct: 191 NKMKGMERCKPNIVTYNILLRAFSQARNVDQVNALFKDLAESIIAPDIYTYNGVMDAYGK 250

Query: 449 CDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHAST 628
              +     +   +  +  +    T N ++D Y       + + +F+ +  +   P   T
Sbjct: 251 NGMIREMESVLSRMKSNQCKPDTITFNVLIDSYGKKQEFDKMEQVFKSLLRSKQKPTLPT 310

Query: 629 YKLLCKAYTKANMKELLQKLLKYMDKDGIVPN 724
           +  +   Y KA +KE  + + K M     VP+
Sbjct: 311 FNSMIINYGKARLKEKAEHVFKKMTDMKYVPS 342


>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Glycine max]
          Length = 503

 Score =  405 bits (1042), Expect = e-110
 Identities = 202/274 (73%), Positives = 239/274 (87%), Gaps = 2/274 (0%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA ARN++QVN+LFKDLDE I+SPDIYT+NGVMDAYGKNGM+REME+VL+RMK+
Sbjct: 188  NILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKS 247

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ KPD+ITFNLLIDSYG++Q+F KMEQVFKSLLRSKE+ +LPTFNSMI NYGKARL++K
Sbjct: 248  NQCKPDLITFNLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDK 307

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE VFK+MTDMGYTPS+VT+ESLI  YGFCDCVSRA ++FDE+ ES   ++VSTLNAMLD
Sbjct: 308  AEDVFKRMTDMGYTPSFVTHESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLD 367

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYC+NGLP EAD LFE   S  + P +ST+KLL KAYTKAN KELL KLLK+MDKDGIVP
Sbjct: 368  VYCINGLPQEADSLFERANSIKIYPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIVP 427

Query: 722  NKKFFLEALGAFGSSRAGSESNN--REARSANSQ 817
            NK+FFL+ALGA  S  A SES N   ++++ANS+
Sbjct: 428  NKRFFLDALGAVASLPANSESANAATDSKTANSE 461



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 5/206 (2%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLL 283
           Y+ ++   GK G  R    + S M+    +PD   +N LI ++   +D            
Sbjct: 112 YSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLHSRD------------ 159

Query: 284 RSKEKPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYT-PSYVTYESLITTYGFCDCV 460
                              K +   KA   F+KM  M    P+ VTY  L+  +     V
Sbjct: 160 -------------------KTKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQARNV 200

Query: 461 SRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHASTYKLL 640
            +   +F ++ ES     + T N ++D Y  NG+  E + +   M SN   P   T+ LL
Sbjct: 201 EQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITFNLL 260

Query: 641 CKAYTK----ANMKELLQKLLKYMDK 706
             +Y K      M+++ + LL+  ++
Sbjct: 261 IDSYGKKQEFGKMEQVFKSLLRSKER 286


>ref|XP_004504032.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like isoform X1 [Cicer arietinum]
            gi|502140047|ref|XP_004504033.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like isoform X2 [Cicer arietinum]
          Length = 477

 Score =  405 bits (1041), Expect = e-110
 Identities = 201/277 (72%), Positives = 235/277 (84%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA +RN+DQVN+LFKDLD+ ++SPDIYT+NGVMDAYGKNGM+REME+VL+RMK+
Sbjct: 197  NILLRAFAQSRNVDQVNSLFKDLDDSVVSPDIYTFNGVMDAYGKNGMIREMETVLARMKS 256

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ KPD+IT+NLLIDSYG++Q FDKMEQVFKSLLRSKEKP+LPTFNSMI NYGKARL++K
Sbjct: 257  NQVKPDLITYNLLIDSYGKKQQFDKMEQVFKSLLRSKEKPSLPTFNSMILNYGKARLKDK 316

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE+VF+ MTDMGYTPS+VT+ESLI  YGFCDCVS+A E+FD + ES   ++VSTLNAMLD
Sbjct: 317  AENVFQNMTDMGYTPSFVTHESLIYMYGFCDCVSKAVELFDGLIESKVPMKVSTLNAMLD 376

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYC+NGLP EAD LF       + P ASTYKLL KAYTKAN KELL KLLK+MDKDG++P
Sbjct: 377  VYCINGLPQEADSLFARARRVNIFPDASTYKLLYKAYTKANSKELLDKLLKHMDKDGVIP 436

Query: 722  NKKFFLEALGAFGSSRAGSESNNREARSANSQGRAKT 832
            NK+FFL+ALGA GSS   S S N    S N Q  AKT
Sbjct: 437  NKRFFLDALGAIGSSTEKSGSANAGTDSKNPQKFAKT 473



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 42/218 (19%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQD-----------F 250
           Y+ ++   GK G +R    + S M+    +PD   +N LI ++   ++           F
Sbjct: 121 YSKLISVMGKKGQIRLAMWLFSEMRNTGCRPDTSVYNALISAHLHTRNKSNALAKALGYF 180

Query: 251 DKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESL 430
           +KM+ + +       KP + T+N ++  + ++R  ++  S+FK + D   +P   T+  +
Sbjct: 181 EKMKGIERC------KPNIVTYNILLRAFAQSRNVDQVNSLFKDLDDSVVSPDIYTFNGV 234

Query: 431 ITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGL 610
           +  YG    +     +   +  +  +  + T N ++D Y       + + +F+ +  +  
Sbjct: 235 MDAYGKNGMIREMETVLARMKSNQVKPDLITYNLLIDSYGKKQQFDKMEQVFKSLLRSKE 294

Query: 611 LPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVPN 724
            P   T+  +   Y KA +K+  + + + M   G  P+
Sbjct: 295 KPSLPTFNSMILNYGKARLKDKAENVFQNMTDMGYTPS 332


>ref|XP_006585305.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Glycine max]
          Length = 526

 Score =  400 bits (1029), Expect = e-109
 Identities = 200/274 (72%), Positives = 236/274 (86%), Gaps = 2/274 (0%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA ARN++QVN+LFKDLDE I+SPDIYT+NGVMDAYGKNGM+REME+VL+RMK+
Sbjct: 197  NILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKS 256

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ KPD+ITFNLLIDSYG++Q F KMEQVFKSLL SKE+P+LPTFNSMI NYGKARL++K
Sbjct: 257  NQCKPDLITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSLPTFNSMILNYGKARLKDK 316

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE VFKKMTDMGYT S+VT+ES+I  YGFCDCVSRA ++FDE+ ES   ++VSTLNAMLD
Sbjct: 317  AEDVFKKMTDMGYTLSFVTHESMIYMYGFCDCVSRAAQLFDELVESKVHIKVSTLNAMLD 376

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYC+NGLP EAD LFE   S  + P +ST+KLL KAYTKAN KELL KLLK+MDKDGI+P
Sbjct: 377  VYCLNGLPQEADSLFERAISIKIHPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIIP 436

Query: 722  NKKFFLEALGAFGSSRAGSESNN--REARSANSQ 817
            NK+FFL+ALGA  S  A SES N   ++ +ANS+
Sbjct: 437  NKRFFLDALGAVASLPANSESANAATDSNTANSE 470



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 7/210 (3%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSL- 280
           Y+ ++   GK G  R    + S M+    +PD   +N LI ++ R +D  K++ + K++ 
Sbjct: 121 YSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSVYNALITAHLRSRD--KIKALAKAIG 178

Query: 281 ----LRSKE--KPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTY 442
               ++  E  KP + T+N ++  + +AR  E+  S+FK + +   +P   T+  ++  Y
Sbjct: 179 YFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAY 238

Query: 443 GFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHA 622
           G    +     +   +  +  +  + T N ++D Y       + + +F+ +  +   P  
Sbjct: 239 GKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSL 298

Query: 623 STYKLLCKAYTKANMKELLQKLLKYMDKDG 712
            T+  +   Y KA +K+  + + K M   G
Sbjct: 299 PTFNSMILNYGKARLKDKAEDVFKKMTDMG 328


>ref|XP_004296690.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  400 bits (1027), Expect = e-109
 Identities = 200/263 (76%), Positives = 227/263 (86%)
 Frame = +2

Query: 2   NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
           NILLRA+A ARN+D+VN+LFKDLDE I  PDIYTYNGVMDAYGKNGM+R+MESVLSRMK+
Sbjct: 143 NILLRAYAQARNVDKVNSLFKDLDESIACPDIYTYNGVMDAYGKNGMIRDMESVLSRMKS 202

Query: 182 NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
           NQ KPDIITFNLLIDSYG++Q FDKMEQVFKSLL SKE+PTLPTFNSMI NYGKARL+E+
Sbjct: 203 NQCKPDIITFNLLIDSYGKKQQFDKMEQVFKSLLHSKERPTLPTFNSMIINYGKARLKEQ 262

Query: 362 AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
           AESVFK+M DM Y+PS++TYESL+  YG+CD VS+AREIFD V ESG+E++VSTLN MLD
Sbjct: 263 AESVFKRMIDMKYSPSFITYESLMMMYGYCDSVSKAREIFDGVAESGQEMKVSTLNVMLD 322

Query: 542 VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
           VYC NGLP EAD L     S G+ P+  TYKLL KAYTKANMK+LL KLLK MDKDGIVP
Sbjct: 323 VYCRNGLPMEADKLLLSANSIGIRPNVCTYKLLYKAYTKANMKDLLDKLLKSMDKDGIVP 382

Query: 722 NKKFFLEALGAFGSSRAGSESNN 790
           NK+FFLEALGAF SS   SES +
Sbjct: 383 NKRFFLEALGAFLSSTGNSESGS 405



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDKMEQ---VFK 274
           Y+ ++   GK G  R    + S M+ +  +PD   +N LI ++   +D  K  +   V+ 
Sbjct: 67  YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALISAHLNSKDKGKALEKGLVYF 126

Query: 275 SLLRSKEK--PTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTYGF 448
           + ++  E+  P + T+N ++  Y +AR  +K  S+FK + +    P   TY  ++  YG 
Sbjct: 127 NKMKGMERCQPNIVTYNILLRAYAQARNVDKVNSLFKDLDESIACPDIYTYNGVMDAYGK 186

Query: 449 CDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHAST 628
              +     +   +  +  +  + T N ++D Y       + + +F+ +  +   P   T
Sbjct: 187 NGMIRDMESVLSRMKSNQCKPDIITFNLLIDSYGKKQQFDKMEQVFKSLLHSKERPTLPT 246

Query: 629 YKLLCKAYTKANMKELLQKLLKYM 700
           +  +   Y KA +KE  + + K M
Sbjct: 247 FNSMIINYGKARLKEQAESVFKRM 270


>ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Cucumis sativus]
          Length = 528

 Score =  391 bits (1005), Expect = e-106
 Identities = 197/271 (72%), Positives = 225/271 (83%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NIL RAFA A  +DQVN LFKDLDE ++S DIYTYNGVMDAYGKNG ++EME +L+RMK+
Sbjct: 206  NILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKS 265

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ KPDII+FNLLIDSYG++Q FDKMEQVFKSLLRSKE+PTLPTFNSMITNYGKARLREK
Sbjct: 266  NQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREK 325

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE VF+KM DMGY PSYVT ESLI  YG CDCVS+AREIFD +  SGKE++VSTLNAMLD
Sbjct: 326  AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLD 385

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYC+NGLP EADLLFE   +  + P ++TYKLL KAYTKA+ KELL+KLLK MDK GI+P
Sbjct: 386  VYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIP 445

Query: 722  NKKFFLEALGAFGSSRAGSESNNREARSANS 814
            NK+FFL+ALG  GSS+   E       S NS
Sbjct: 446  NKRFFLDALGTIGSSQEKPEPARTRTGSRNS 476


>ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Cucumis sativus]
          Length = 494

 Score =  388 bits (997), Expect = e-105
 Identities = 193/256 (75%), Positives = 221/256 (86%)
 Frame = +2

Query: 2   NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
           NIL RAFA A  +DQVN LFKDLDE ++S DIYTYNGVMDAYGKNG ++EME +L+RMK+
Sbjct: 206 NILTRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKS 265

Query: 182 NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
           NQ KPDII+FNLLIDSYG++Q FDKMEQVFKSLLRSKE+PTLPTFNSMITNYGKARLREK
Sbjct: 266 NQIKPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREK 325

Query: 362 AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
           AE VF+KM DMGY PSYVT ESLI  YG CDCVS+AREIFD +  SGKE++VSTLNAMLD
Sbjct: 326 AEEVFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLD 385

Query: 542 VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
           VYC+NGLP EADLLFE   +  + P ++TYKLL KAYTKA+ KELL+KLLK MDK GI+P
Sbjct: 386 VYCINGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIP 445

Query: 722 NKKFFLEALGAFGSSR 769
           NK+FFL+ALG  GSS+
Sbjct: 446 NKRFFLDALGTIGSSQ 461


>ref|XP_004237613.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like [Solanum lycopersicum]
          Length = 478

 Score =  387 bits (993), Expect = e-105
 Identities = 190/256 (74%), Positives = 223/256 (87%), Gaps = 1/256 (0%)
 Frame = +2

Query: 2   NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
           NILLRAFA A+N++QV+AL KDLDE I++PDI+T+NG+MDAYGKNGM+ EME VLSRMK+
Sbjct: 203 NILLRAFAQAKNVEQVDALLKDLDESIVTPDIFTFNGLMDAYGKNGMINEMEHVLSRMKS 262

Query: 182 NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
           N+ KPDIITFN+LIDSYG++QDF KMEQVFKSLL+SKEKPT+PTFNSMITNYGKARLREK
Sbjct: 263 NKLKPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPTFNSMITNYGKARLREK 322

Query: 362 AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
           +E V +KM D+GY PSY+TYE LI  YG CDCVS+ARE+FD V ES KE + STLN+MLD
Sbjct: 323 SELVLEKMIDLGYKPSYITYECLIVMYGHCDCVSKARELFDRVMESEKEKKASTLNSMLD 382

Query: 542 VYCMNGLPTEADLLFEYMCSNGLLP-HASTYKLLCKAYTKANMKELLQKLLKYMDKDGIV 718
            YCMNGLP EA LLFE + S    P  +STYKLL KAYTKA+MKEL+QKLL YMD+DGI+
Sbjct: 383 AYCMNGLPMEAHLLFESIHSAKAFPIDSSTYKLLYKAYTKADMKELVQKLLTYMDEDGII 442

Query: 719 PNKKFFLEALGAFGSS 766
           PNKKFFL+ALGAFGS+
Sbjct: 443 PNKKFFLDALGAFGSA 458



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 55/224 (24%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
 Frame = +2

Query: 56  LFKDLDEGIISPDIYTYNGVMDAY----GKNGMMREMESVLSRMKT-NQTKPDIITFNLL 220
           LF ++      PD   YN V+ A+     K+  + +      +MK   +  P I+T+N+L
Sbjct: 146 LFSEMRNSGCRPDTSVYNAVISAHLHSRDKSKALTKAMGYFEKMKEMERCSPSIVTYNIL 205

Query: 221 IDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREKAESVFKKMTDMGY 400
           + ++ + ++ ++++ + K L  S   P + TFN ++  YGK  +  + E V  +M     
Sbjct: 206 LRAFAQAKNVEQVDALLKDLDESIVTPDIFTFNGLMDAYGKNGMINEMEHVLSRMKSNKL 265

Query: 401 TPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADL 580
            P  +T+  LI +YG      +  ++F  + +S ++  + T N+M+  Y    L  +++L
Sbjct: 266 KPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPTFNSMITNYGKARLREKSEL 325

Query: 581 LFEYMCSNGLLPHASTYKLL------CKAYTKANMKELLQKLLK 694
           + E M   G  P   TY+ L      C   +KA  +EL  ++++
Sbjct: 326 VLEKMIDLGYKPSYITYECLIVMYGHCDCVSKA--RELFDRVME 367



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 42/212 (19%), Positives = 97/212 (45%), Gaps = 5/212 (2%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDK-MEQVFKSL 280
           Y+ ++   GK G +R    + S M+ +  +PD   +N +I ++   +D  K + +     
Sbjct: 127 YSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNAVISAHLHSRDKSKALTKAMGYF 186

Query: 281 LRSKE----KPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTYGF 448
            + KE     P++ T+N ++  + +A+  E+ +++ K + +   TP   T+  L+  YG 
Sbjct: 187 EKMKEMERCSPSIVTYNILLRAFAQAKNVEQVDALLKDLDESIVTPDIFTFNGLMDAYGK 246

Query: 449 CDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHAST 628
              ++    +   +  +  +  + T N ++D Y       + + +F+ +  +   P   T
Sbjct: 247 NGMINEMEHVLSRMKSNKLKPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPT 306

Query: 629 YKLLCKAYTKANMKELLQKLLKYMDKDGIVPN 724
           +  +   Y KA ++E  + +L+ M   G  P+
Sbjct: 307 FNSMITNYGKARLREKSELVLEKMIDLGYKPS 338


>ref|XP_002306340.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550338395|gb|EEE93336.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 414

 Score =  386 bits (991), Expect = e-105
 Identities = 188/242 (77%), Positives = 220/242 (90%)
 Frame = +2

Query: 2   NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
           NI+LRAFA ARN++QVNALFKDL+E I+SPDIYTYNGV+DAYGKNGM+REMESVLSRMK 
Sbjct: 173 NIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAYGKNGMIREMESVLSRMKI 232

Query: 182 NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
           +Q KPDIITFNLLIDSYG++QDF+KMEQVFKSLLRSKEKPTLPTFNSMI NYGKARL++K
Sbjct: 233 DQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKDK 292

Query: 362 AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
           AESVFKKM DM YTPS++T+ESLI  YG CDCVS+AR+IFD++ ESGKE++VSTLNA+L+
Sbjct: 293 AESVFKKMADMRYTPSFITFESLIMMYGICDCVSKARDIFDDMVESGKEVKVSTLNAVLN 352

Query: 542 VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
           VYCMNGL  EA +L E   S G+ P++STYKLL +AYTKA MKEL+QKLLK+MDKDGI+P
Sbjct: 353 VYCMNGLHMEAHILLENARSIGVPPNSSTYKLLYRAYTKAKMKELVQKLLKHMDKDGIIP 412

Query: 722 NK 727
           NK
Sbjct: 413 NK 414



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 43/206 (20%), Positives = 93/206 (45%), Gaps = 7/206 (3%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSL- 280
           Y+ ++   GK G  R    + S M+ +  +PD   +N LI ++   +D  K + + K+L 
Sbjct: 97  YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSKD--KAKSLTKALA 154

Query: 281 ----LRSKEK--PTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTY 442
               ++S E+  P + T+N ++  + +AR   +  ++FK + +   +P   TY  ++  Y
Sbjct: 155 YFEKMKSIERCQPNVVTYNIILRAFAQARNVNQVNALFKDLEESIVSPDIYTYNGVLDAY 214

Query: 443 GFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHA 622
           G    +     +   +     +  + T N ++D Y       + + +F+ +  +   P  
Sbjct: 215 GKNGMIREMESVLSRMKIDQCKPDIITFNLLIDSYGKKQDFEKMEQVFKSLLRSKEKPTL 274

Query: 623 STYKLLCKAYTKANMKELLQKLLKYM 700
            T+  +   Y KA +K+  + + K M
Sbjct: 275 PTFNSMIVNYGKARLKDKAESVFKKM 300


>gb|EYU31068.1| hypothetical protein MIMGU_mgv1a024034mg [Mimulus guttatus]
          Length = 496

 Score =  385 bits (988), Expect = e-104
 Identities = 190/266 (71%), Positives = 227/266 (85%), Gaps = 1/266 (0%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA A+N+DQVN LFKDL+E I++PDI+T+NGVMDAYGKNGM+REME VL++MK+
Sbjct: 217  NILLRAFAQAKNVDQVNTLFKDLEESIVTPDIFTFNGVMDAYGKNGMIREMEFVLAKMKS 276

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ KPD ITFN LID+YG++Q+F+KMEQVF SLLRSKEKPTLPTFNSMITNYGKARLREK
Sbjct: 277  NQIKPDTITFNSLIDAYGKKQEFEKMEQVFTSLLRSKEKPTLPTFNSMITNYGKARLREK 336

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
             + VFK+MT+MGY PS+VTYE LIT YG+CD VSRARE+FDE+ +S  E ++STLNAMLD
Sbjct: 337  GDLVFKRMTEMGYKPSFVTYECLITMYGYCDRVSRAREVFDEMVDSENEKKISTLNAMLD 396

Query: 542  VYCMNGLPTEADLLFEYMCSNGLL-PHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIV 718
             YCMNGLP EAD LF+   S+ +    +STYKLL KAYTKA+MKELL KL+  MDKDGI+
Sbjct: 397  AYCMNGLPMEADALFDNARSSRMFRVDSSTYKLLYKAYTKADMKELLGKLVVCMDKDGII 456

Query: 719  PNKKFFLEALGAFGSSRAGSESNNRE 796
            PNK+FFL+ALGA GS   G +S NR+
Sbjct: 457  PNKRFFLDALGAIGSFHDGKKSTNRK 482



 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
 Frame = +2

Query: 209 FNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREKAES----VF 376
           ++ LI   G++        +F  +  S  +P    +NS+IT +  +R + KA +     F
Sbjct: 141 YSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNSLITAHLHSRDKSKALAKSLGYF 200

Query: 377 KKMTDMGYT-PSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCM 553
           +KM  M    PS VTY  L+  +     V +   +F ++ ES     + T N ++D Y  
Sbjct: 201 EKMKSMERCKPSIVTYNILLRAFAQAKNVDQVNTLFKDLEESIVTPDIFTFNGVMDAYGK 260

Query: 554 NGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVPNKKF 733
           NG+  E + +   M SN + P   T+  L  AY K    E ++++   + +    P    
Sbjct: 261 NGMIREMEFVLAKMKSNQIKPDTITFNSLIDAYGKKQEFEKMEQVFTSLLRSKEKPTLPT 320

Query: 734 FLEALGAFGSSR 769
           F   +  +G +R
Sbjct: 321 FNSMITNYGKAR 332


>ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565376411|ref|XP_006354699.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565376413|ref|XP_006354700.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 457

 Score =  382 bits (981), Expect = e-103
 Identities = 190/266 (71%), Positives = 226/266 (84%), Gaps = 1/266 (0%)
 Frame = +2

Query: 2   NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
           NILLRAFA A+N++QV+AL KDLDE I++PDI+T+NG+MDAYGKNGM+ EME +LSRMK+
Sbjct: 182 NILLRAFAQAKNVEQVDALLKDLDESIVTPDIFTFNGLMDAYGKNGMINEMEHILSRMKS 241

Query: 182 NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
           NQ KPDIITFN+LIDSYG++QDF KMEQVFKSLL+SKEKPT+PTFNSMITNYGKARLREK
Sbjct: 242 NQLKPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPTFNSMITNYGKARLREK 301

Query: 362 AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
           +E V +KM D+GY PSY+TYE LI  YG CDCV++ARE+FD V ES  E + STLN+MLD
Sbjct: 302 SELVLEKMIDLGYKPSYITYECLIVMYGHCDCVAKARELFDRVIESETEKKASTLNSMLD 361

Query: 542 VYCMNGLPTEADLLFEYMCSNGLLP-HASTYKLLCKAYTKANMKELLQKLLKYMDKDGIV 718
            YCMNGLP EA LLFE + S  + P  +STYKLL KAYTKA+MKEL+QKLL  MD+DGI+
Sbjct: 362 AYCMNGLPMEAHLLFESIHSAKVFPIDSSTYKLLYKAYTKADMKELVQKLLTCMDEDGII 421

Query: 719 PNKKFFLEALGAFGSSRAGSESNNRE 796
           PNKKFFL+ALGAFGS    + +N RE
Sbjct: 422 PNKKFFLDALGAFGS----APTNRRE 443



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 53/222 (23%), Positives = 106/222 (47%), Gaps = 9/222 (4%)
 Frame = +2

Query: 56  LFKDLDEGIISPDIYTYNGVMDAY----GKNGMMREMESVLSRMK-TNQTKPDIITFNLL 220
           LF ++      PD   YN V+ A+     K+  + +      +MK   +  P I+T+N+L
Sbjct: 125 LFSEMRNSGCRPDTSVYNAVISAHLHSRDKSKALTKAMGYFEKMKGMERCSPSIVTYNIL 184

Query: 221 IDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREKAESVFKKMTDMGY 400
           + ++ + ++ ++++ + K L  S   P + TFN ++  YGK  +  + E +  +M     
Sbjct: 185 LRAFAQAKNVEQVDALLKDLDESIVTPDIFTFNGLMDAYGKNGMINEMEHILSRMKSNQL 244

Query: 401 TPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADL 580
            P  +T+  LI +YG      +  ++F  + +S ++  + T N+M+  Y    L  +++L
Sbjct: 245 KPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPTFNSMITNYGKARLREKSEL 304

Query: 581 LFEYMCSNGLLPHASTYKLLCKAY----TKANMKELLQKLLK 694
           + E M   G  P   TY+ L   Y      A  +EL  ++++
Sbjct: 305 VLEKMIDLGYKPSYITYECLIVMYGHCDCVAKARELFDRVIE 346



 Score = 64.7 bits (156), Expect = 6e-08
 Identities = 43/212 (20%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDK-----MEQV 268
           Y+ ++   GK G +R    + S M+ +  +PD   +N +I ++   +D  K     M   
Sbjct: 106 YSKLISVMGKKGQIRMAMWLFSEMRNSGCRPDTSVYNAVISAHLHSRDKSKALTKAMGYF 165

Query: 269 FKSLLRSKEKPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTYGF 448
            K     +  P++ T+N ++  + +A+  E+ +++ K + +   TP   T+  L+  YG 
Sbjct: 166 EKMKGMERCSPSIVTYNILLRAFAQAKNVEQVDALLKDLDESIVTPDIFTFNGLMDAYGK 225

Query: 449 CDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHAST 628
              ++    I   +  +  +  + T N ++D Y       + + +F+ +  +   P   T
Sbjct: 226 NGMINEMEHILSRMKSNQLKPDIITFNILIDSYGKKQDFQKMEQVFKSLLQSKEKPTIPT 285

Query: 629 YKLLCKAYTKANMKELLQKLLKYMDKDGIVPN 724
           +  +   Y KA ++E  + +L+ M   G  P+
Sbjct: 286 FNSMITNYGKARLREKSELVLEKMIDLGYKPS 317


>ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355524118|gb|AET04572.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 635

 Score =  379 bits (972), Expect = e-102
 Identities = 192/272 (70%), Positives = 222/272 (81%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA AR+++QVN LFKDLDE  +SPDIYT+NGVMD YGKNGM+REMESVL RMK+
Sbjct: 196  NILLRAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDGYGKNGMIREMESVLVRMKS 255

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            NQ K D+IT+NLLIDSYG++Q FDKMEQVFKSL RSKEKPTLPTFNSMI NYGKARL++K
Sbjct: 256  NQVKLDLITYNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNYGKARLKDK 315

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE+VF+ MTDMGYTPS+VT+ESLI  YG C CVS A E+FD++ ES   ++VSTLNAMLD
Sbjct: 316  AENVFQNMTDMGYTPSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVPIKVSTLNAMLD 375

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYC+NGL  EAD LF    S  + P A+TYKLL KAYTKAN KELL KLLK MDKD ++P
Sbjct: 376  VYCINGLQQEADSLFTRAKSIKIFPDATTYKLLYKAYTKANSKELLDKLLKQMDKDSVIP 435

Query: 722  NKKFFLEALGAFGSSRAGSESNNREARSANSQ 817
            NK+FFL+ALGA GSS   S S N    S+  Q
Sbjct: 436  NKRFFLDALGAIGSSTEKSGSANAGTGSSRPQ 467



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 44/214 (20%), Positives = 97/214 (45%), Gaps = 7/214 (3%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSL- 280
           Y+ ++   GK G +R    + S M+    +PD   +N LI ++   +D  K + + K+L 
Sbjct: 120 YSKLISVMGKKGQIRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRD--KSKALVKALG 177

Query: 281 ----LRSKE--KPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTY 442
               +++ E  KP + T+N ++  + +AR   +   +FK + +   +P   T+  ++  Y
Sbjct: 178 YFEKMKTTERCKPNIVTYNILLRAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDGY 237

Query: 443 GFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHA 622
           G    +     +   +  +  +L + T N ++D Y       + + +F+ +  +   P  
Sbjct: 238 GKNGMIREMESVLVRMKSNQVKLDLITYNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTL 297

Query: 623 STYKLLCKAYTKANMKELLQKLLKYMDKDGIVPN 724
            T+  +   Y KA +K+  + + + M   G  P+
Sbjct: 298 PTFNSMILNYGKARLKDKAENVFQNMTDMGYTPS 331


>ref|XP_006843693.1| hypothetical protein AMTR_s00007p00203740 [Amborella trichopoda]
           gi|548846061|gb|ERN05368.1| hypothetical protein
           AMTR_s00007p00203740 [Amborella trichopoda]
          Length = 494

 Score =  375 bits (962), Expect = e-101
 Identities = 184/257 (71%), Positives = 218/257 (84%)
 Frame = +2

Query: 2   NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
           NILLRAFA +R++ QV  LF DL+   +S DIYTYNGVMDAYGKNGM+ E+E++L RM+ 
Sbjct: 217 NILLRAFAQSRDVYQVETLFVDLETNALSADIYTYNGVMDAYGKNGMLVELEAMLLRMRK 276

Query: 182 NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
           NQ +PD IT+NLLIDSYG+RQ FDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK
Sbjct: 277 NQCRPDTITYNLLIDSYGKRQAFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 336

Query: 362 AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
           AE VF+KM D+GY PS++TYESL+  YG+CDCVSRAR+IF E+ +SG ++QVSTLN MLD
Sbjct: 337 AEWVFRKMIDLGYKPSFITYESLMMAYGYCDCVSRARDIFSEMIDSGMQIQVSTLNTMLD 396

Query: 542 VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
           VYCMNGL  EADLL +Y  +  +LP +STYKLL KAYTKANM +LL+ L+K M+KD IVP
Sbjct: 397 VYCMNGLTGEADLLLQYARTKEVLPDSSTYKLLYKAYTKANMMDLLEMLVKQMEKDDIVP 456

Query: 722 NKKFFLEALGAFGSSRA 772
           NKKFFLEALG  GS++A
Sbjct: 457 NKKFFLEALGTLGSTQA 473


>ref|XP_006411755.1| hypothetical protein EUTSA_v10024997mg [Eutrema salsugineum]
            gi|557112925|gb|ESQ53208.1| hypothetical protein
            EUTSA_v10024997mg [Eutrema salsugineum]
          Length = 496

 Score =  371 bits (952), Expect = e-100
 Identities = 188/277 (67%), Positives = 225/277 (81%), Gaps = 1/277 (0%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA +  +DQVNALFK+LD   +SPD+YT+NGVMDAYGKNGM++EMESVL+RM++
Sbjct: 214  NILLRAFAQSGKVDQVNALFKELDISAVSPDVYTFNGVMDAYGKNGMIKEMESVLTRMRS 273

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
            N+ KPDIITFNLLIDSYG++Q+F+KMEQ FKSLLRSKEKPTLPTFNSMI NYGKAR R+K
Sbjct: 274  NECKPDIITFNLLIDSYGKKQEFEKMEQTFKSLLRSKEKPTLPTFNSMIINYGKARRRDK 333

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AE VF+KM DM Y PS++TYE +I  YG+C  VSRARE+F+EV ES + L+ STLNAMLD
Sbjct: 334  AEWVFEKMNDMNYMPSFITYECMIMMYGYCGSVSRAREMFEEVVESERVLKPSTLNAMLD 393

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
            VYC+NGL  EAD LF    +  + P ASTYKLL KAYTKA+MKE +Q L+K M+KDGIVP
Sbjct: 394  VYCLNGLHMEADKLFHSASAFRVHPDASTYKLLYKAYTKADMKERVQMLMKKMEKDGIVP 453

Query: 722  NKKFFLEALGAFGSSRAGSESNNREAR-SANSQGRAK 829
            NK+FFLEAL  FGS   GS+S  R++  S   Q  AK
Sbjct: 454  NKRFFLEALEVFGSRLPGSDSGRRKSTGSTRLQDSAK 490



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 54/223 (24%), Positives = 86/223 (38%), Gaps = 1/223 (0%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLL 283
           Y+ ++   GK G  R    + S MK +  +PD   +N LI ++   +D            
Sbjct: 138 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRD------------ 185

Query: 284 RSKEKPTLPTFNSMITNYGKARLREKAESVFKKMTDMGYT-PSYVTYESLITTYGFCDCV 460
                              KA+  EK    F KM  M    P+ VTY  L+  +     V
Sbjct: 186 -------------------KAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQSGKV 226

Query: 461 SRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHASTYKLL 640
            +   +F E+  S     V T N ++D Y  NG+  E + +   M SN   P   T+ LL
Sbjct: 227 DQVNALFKELDISAVSPDVYTFNGVMDAYGKNGMIKEMESVLTRMRSNECKPDIITFNLL 286

Query: 641 CKAYTKANMKELLQKLLKYMDKDGIVPNKKFFLEALGAFGSSR 769
             +Y K    E +++  K + +    P    F   +  +G +R
Sbjct: 287 IDSYGKKQEFEKMEQTFKSLLRSKEKPTLPTFNSMIINYGKAR 329


>ref|XP_004953934.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like isoform X2 [Setaria italica]
          Length = 500

 Score =  370 bits (951), Expect = e-100
 Identities = 188/281 (66%), Positives = 225/281 (80%), Gaps = 4/281 (1%)
 Frame = +2

Query: 2    NILLRAFALARNMDQVNALFKDLDEGIISPDIYTYNGVMDAYGKNGMMREMESVLSRMKT 181
            NILLRAFA A +  QV+ LFKDLDE I+SPDIYTYNGV+DAYGKNGM+++MESVL RMK+
Sbjct: 204  NILLRAFAQAGDTKQVDILFKDLDESIVSPDIYTYNGVIDAYGKNGMIKDMESVLQRMKS 263

Query: 182  NQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLREK 361
             Q +PD+ITFN+LIDSYGR+Q FDKMEQVFKSLLRSKE+PT PTFNSMITNYGKARLREK
Sbjct: 264  KQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGKARLREK 323

Query: 362  AESVFKKMTDMGYTPSYVTYESLITTYGFCDCVSRAREIFDEVTESGKELQVSTLNAMLD 541
            AESV +KM +MG+ P+YVT E LI  Y  CDCVSRAR+IFDE+  S  ++ +S+LNAMLD
Sbjct: 324  AESVLEKMEEMGFKPNYVTQECLIMMYAHCDCVSRARQIFDELVTSQNKVHLSSLNAMLD 383

Query: 542  VYCMNGLPTEADLLFEYMCSNGLLPHASTYKLLCKAYTKANMKELLQKLLKYMDKDGIVP 721
             YCMNGL +EAD L +     G++P  STYKLL KAYTKAN   L+QKLLK M+K GIVP
Sbjct: 384  AYCMNGLHSEADRLLDTALQKGIVPSGSTYKLLYKAYTKANDTVLVQKLLKRMNKQGIVP 443

Query: 722  NKKFFLEALGAFGSS----RAGSESNNREARSANSQGRAKT 832
            NKKFFL+AL AFG+S    R  S +N+    S++S G ++T
Sbjct: 444  NKKFFLDALEAFGTSERKPRTSSATNSASKPSSDSAGDSET 484



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 48/214 (22%), Positives = 101/214 (47%), Gaps = 7/214 (3%)
 Frame = +2

Query: 104 YNGVMDAYGKNGMMREMESVLSRMKTNQTKPDIITFNLLIDSYGRRQDFDKMEQVFKSL- 280
           Y+ ++   G+ G +R    + S+M+ +  KPD   +N LI ++   +D  K + + K+L 
Sbjct: 128 YSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRD--KSKALAKALG 185

Query: 281 ----LRSKEK--PTLPTFNSMITNYGKARLREKAESVFKKMTDMGYTPSYVTYESLITTY 442
               ++S E+  PT+ T+N ++  + +A   ++ + +FK + +   +P   TY  +I  Y
Sbjct: 186 YFEKMKSIERCQPTIVTYNILLRAFAQAGDTKQVDILFKDLDESIVSPDIYTYNGVIDAY 245

Query: 443 GFCDCVSRAREIFDEVTESGKELQVSTLNAMLDVYCMNGLPTEADLLFEYMCSNGLLPHA 622
           G    +     +   +        V T N ++D Y       + + +F+ +  +   P  
Sbjct: 246 GKNGMIKDMESVLQRMKSKQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTH 305

Query: 623 STYKLLCKAYTKANMKELLQKLLKYMDKDGIVPN 724
            T+  +   Y KA ++E  + +L+ M++ G  PN
Sbjct: 306 PTFNSMITNYGKARLREKAESVLEKMEEMGFKPN 339