BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00015860
         (1289 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   546   e-153
gb|AGQ44775.1| general transcription factor [Camellia sinensis]       512   e-142
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   497   e-138
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...   481   e-133
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   479   e-132
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   478   e-132
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr...   456   e-125
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr...   456   e-125
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc...   454   e-125
ref|XP_007015592.1| BSD domain (BTF2-like transcription factors,...   454   e-125
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun...   447   e-123
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus...   444   e-122
ref|XP_002310512.2| transcription factor-related family protein ...   442   e-121
ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group] g...   429   e-117
ref|XP_002530618.1| TFIIH basal transcription factor complex sub...   428   e-117
ref|NP_175971.3| probable RNA polymerase II transcription factor...   426   e-116
ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transc...   425   e-116
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps...   425   e-116
ref|XP_002307021.1| transcription factor-related family protein ...   422   e-115
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc...   421   e-115

>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1 [Vitis vinifera] gi|296090002|emb|CBI39821.3| unnamed
            protein product [Vitis vinifera]
          Length = 602

 Score =  546 bits (1406), Expect = e-153
 Identities = 269/341 (78%), Positives = 303/341 (88%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLKHDDILA+EARRKIRRVDPTLDMEADQGDDY+HLPDHGI RDGSKE  D +Y
Sbjct: 262  DEELAVFLKHDDILANEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIIDPQY 321

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            EQY+RTLSQDLNRHAAVVLEGR +DV L DTRTVAEALA SK+ E A+E SD +  +ERL
Sbjct: 322  EQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRERL 381

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            ER+SRM EIEDLQAPR LPFA LCIKDPR+YFDSQQANALK LGD++AG+K I C ++++
Sbjct: 382  ERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSTQ 441

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            +AY  LR  ISE+K+ GL DP+VKP++A KVL GLTQ +SSTK++LGKNPQESVLDRLP 
Sbjct: 442  EAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPI 501

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
             TK+ELLHHWTSIQELL+HFWS+YP+TT YLY K SRLKDAM++IY KLQEIKESVQSDF
Sbjct: 502  ITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSDF 561

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGFV 1023
            RHQVSLLVQPMLQALDAAFAHYDAD QKRS +SGERPNGFV
Sbjct: 562  RHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNGFV 602


>gb|AGQ44775.1| general transcription factor [Camellia sinensis]
          Length = 340

 Score =  512 bits (1319), Expect = e-142
 Identities = 252/335 (75%), Positives = 290/335 (86%)
 Frame = +1

Query: 19   FLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEYEQYKRT 198
            FLK+DD+ ASEARRKIRRVDPTLDMEAD+GDDYIHLPDHG+ RD SK+  DS YE+Y+R+
Sbjct: 6    FLKNDDVWASEARRKIRRVDPTLDMEADEGDDYIHLPDHGLSRDDSKDAIDSPYEEYRRS 65

Query: 199  LSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERLERVSRM 378
            LSQ LNRH AVVLEGR++DV LGDTR+VAEALA SKQ ELA+E SD NANQERL+R+S++
Sbjct: 66   LSQVLNRHGAVVLEGRSIDVELGDTRSVAEALARSKQVELANEASDGNANQERLDRISQL 125

Query: 379  AEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSEQAYSFL 558
            AEIEDLQ PR  P APL IKDPR+YFDS QANALK LGD++   + + C +++ +AY  L
Sbjct: 126  AEIEDLQPPRDPPLAPLFIKDPRDYFDSHQANALKTLGDTLVETRQMKCNLSTSEAYGSL 185

Query: 559  RELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPNRTKDEL 738
            RE ISE+K  GL DP+VKPE+A KV  GLTQ +SSTKY+LGKNPQESVLDRLPN TKDEL
Sbjct: 186  RECISEIKIAGLSDPIVKPEIAFKVFNGLTQNISSTKYHLGKNPQESVLDRLPNITKDEL 245

Query: 739  LHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDFRHQVSL 918
            LHHWTSIQELLKHFWS+YP+TT+YLY KV RLKDAM++IY KLQEIKESVQSDFRHQVSL
Sbjct: 246  LHHWTSIQELLKHFWSSYPITTSYLYVKVGRLKDAMSQIYPKLQEIKESVQSDFRHQVSL 305

Query: 919  LVQPMLQALDAAFAHYDADMQKRSTKSGERPNGFV 1023
            LVQPMLQALDAAFA YDAD+QKRS K G+R NG+V
Sbjct: 306  LVQPMLQALDAAFARYDADLQKRSAKGGDRTNGYV 340


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  497 bits (1279), Expect = e-138
 Identities = 246/313 (78%), Positives = 277/313 (88%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDY+HLPDHGI RDGSKE  D +Y
Sbjct: 305  DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYMHLPDHGIFRDGSKEIIDPQY 364

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            EQY+RTLSQDLNRHAAVVLEGR +DV L DTRTVAEALA SK+ E A+E SD +  +ERL
Sbjct: 365  EQYRRTLSQDLNRHAAVVLEGRPIDVELEDTRTVAEALAKSKRVEAANEKSDGSVTRERL 424

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            ER+SRM EIEDLQAPR LPFA LCIKDPR+YFDSQQANALK LGD++AG+K I C ++S+
Sbjct: 425  ERISRMTEIEDLQAPRDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSSQ 484

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            +AY  LR  ISE+K+ GL DP+VKP++A KVL GLTQ +SSTK++LGKNPQESVLDRLP 
Sbjct: 485  EAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPI 544

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
             TK+ELLHHWTSIQELL+HFWS+YP+TT YLY K SRLKDAM++IY KLQEIKESVQSDF
Sbjct: 545  ITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSDF 604

Query: 901  RHQVSLLVQPMLQ 939
            RHQVSLLVQPMLQ
Sbjct: 605  RHQVSLLVQPMLQ 617


>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
            gi|548861733|gb|ERN19104.1| hypothetical protein
            AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  481 bits (1237), Expect = e-133
 Identities = 244/333 (73%), Positives = 280/333 (84%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLKHDDILASEARRKIRRVDPT+DM AD GDDY HLP HGILRDGSKE+ DSE 
Sbjct: 266  DEELAVFLKHDDILASEARRKIRRVDPTVDMAADLGDDYSHLPGHGILRDGSKESVDSES 325

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            E  KRTL QDLNRHAAVVLEGR LDV LGDTRTVAEALA SKQAE+A+E SDE  NQ+RL
Sbjct: 326  ELPKRTLLQDLNRHAAVVLEGRTLDVELGDTRTVAEALARSKQAEVATETSDETENQKRL 385

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            ERVS+M EIEDLQAPR LP+APLCIKDPREYFDSQ+ANA KA GD+ +G     C ++++
Sbjct: 386  ERVSQMTEIEDLQAPRSLPYAPLCIKDPREYFDSQRANAFKATGDTGSGVNKDCCHLSTK 445

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            QAY  LR  I E+K+ G  DP+V P++A KVL  + Q LSST   LGKNPQ +VLD LP+
Sbjct: 446  QAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQQLSSTDPQLGKNPQATVLDMLPH 505

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
            RTK+ELL HWTSIQELL+HFWS+YP+TT +L+ KV+R+KDAMA+IY KL E+KESVQS+F
Sbjct: 506  RTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNRVKDAMAQIYRKLPEVKESVQSEF 565

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKS 999
            RHQVSLLV+PMLQ LD AF HYDA+MQKRSTK+
Sbjct: 566  RHQVSLLVKPMLQVLDEAFKHYDAEMQKRSTKT 598


>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum tuberosum]
          Length = 599

 Score =  479 bits (1233), Expect = e-132
 Identities = 237/341 (69%), Positives = 287/341 (84%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK DD+L SEARRKIRRVDPTLDMEAD+GDDY+HLPDHG+ +  +KE  + +Y
Sbjct: 259  DEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLPQGETKEILEPQY 318

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            E +KR+ SQ LN+HAAVVL GR +DV LGDTR+VAEA   + QAE A+E+SDENA +ER+
Sbjct: 319  EPFKRSFSQYLNQHAAVVLRGRVIDVELGDTRSVAEAFTRTYQAEQATEVSDENAYRERV 378

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            ++VSR+AEIEDLQ P+  P A L IKDPR+YFDSQQANA+KALGD+  G + +   ++ E
Sbjct: 379  KKVSRVAEIEDLQGPQDPPVALLSIKDPRDYFDSQQANAIKALGDAETGIRQLKFSVSKE 438

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            +A+  L++ ISE+ ++GL +P++ PEVA KV  GL+Q +SSTKY LGKNP ESVLD+LP+
Sbjct: 439  EAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTKYYLGKNPHESVLDQLPS 498

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
             TK+ELL HWTSIQELLKHFWS+YP+TT Y Y KV+RLKDAM++IY KLQEIKESVQSD 
Sbjct: 499  ATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDV 558

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGFV 1023
            RHQVSLLVQPMLQALDAAFAHYDAD+QKRS KSGERPNGFV
Sbjct: 559  RHQVSLLVQPMLQALDAAFAHYDADIQKRSAKSGERPNGFV 599


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Solanum lycopersicum]
          Length = 599

 Score =  478 bits (1230), Expect = e-132
 Identities = 236/341 (69%), Positives = 288/341 (84%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK DD+L SEARRKIRRVDPTLDMEAD+GDDY+HLPDHG+ +  +KE  + +Y
Sbjct: 259  DEELAVFLKQDDMLVSEARRKIRRVDPTLDMEADEGDDYMHLPDHGLPQGETKEILEPQY 318

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            E +KR+ SQ LN+HAAVVL+GR +DV LGDTR+VAEA   + QAE A+E+SDENA +ER+
Sbjct: 319  EPFKRSFSQYLNQHAAVVLQGRVIDVELGDTRSVAEAFTRTNQAEQATEVSDENAYRERV 378

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            ++VSR+AEIEDLQ PR  P A L IKDPR+YFDSQQANA+KALGD+  G + +   ++ E
Sbjct: 379  KKVSRVAEIEDLQGPRDPPVALLSIKDPRDYFDSQQANAIKALGDAETGIRQLKFRVSKE 438

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            +A+  L++ ISE+ ++GL +P++ PEVA KV   L+Q +SSTKY+LGKNP ESVLD+LP+
Sbjct: 439  EAFCSLKDSISEINSQGLIEPIISPEVALKVFNLLSQNISSTKYHLGKNPHESVLDQLPS 498

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
             TK+ELL HWTSIQELLKHFWS+YP+TT Y Y KV+RLKDAM++IY KLQEIKESVQSD 
Sbjct: 499  ATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDV 558

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGFV 1023
            RHQVSLLVQPMLQALDAAFAHYDAD+QKRS +SGERPNGFV
Sbjct: 559  RHQVSLLVQPMLQALDAAFAHYDADLQKRSARSGERPNGFV 599


>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
            gi|557555944|gb|ESR65958.1| hypothetical protein
            CICLE_v10007802mg [Citrus clementina]
          Length = 564

 Score =  456 bits (1173), Expect = e-125
 Identities = 231/342 (67%), Positives = 279/342 (81%), Gaps = 1/342 (0%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK DDILA+E R+KIRRVDPTLDMEAD+GDDY HLPDHGI RDG+KE+ + + 
Sbjct: 229  DEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQS 288

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGD-TRTVAEALASSKQAELASEISDENANQER 357
            E Y+RTL QDLNRHAAVVLEGR +DV   D TR +AEALA SK+    +E +D NAN+ER
Sbjct: 289  EHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKRG---NEGADNNANEER 345

Query: 358  LERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTS 537
            L+R  R+AEIEDLQAP  LP APL IKD REYFDSQQAN LKA  DS A  K   C ++ 
Sbjct: 346  LDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKASRDSQASMK---CSLSR 402

Query: 538  EQAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLP 717
            ++AY  +R+ ISE+K  GL DP+V PEVA KV +GLT  +SS KY+LGKNP+E+VLDRLP
Sbjct: 403  QEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLP 462

Query: 718  NRTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSD 897
            + TK++LL+HW SIQELLKHFWS+YP+TT YLY+KV+RLKDA++ IY +L+E+KES+ +D
Sbjct: 463  SATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPAD 522

Query: 898  FRHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGFV 1023
             RHQVSLLV+PM QALDAA  HYDAD+QKRS KSGE+PNG+V
Sbjct: 523  LRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYV 564


>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
            gi|557555943|gb|ESR65957.1| hypothetical protein
            CICLE_v10007802mg [Citrus clementina]
          Length = 597

 Score =  456 bits (1173), Expect = e-125
 Identities = 231/342 (67%), Positives = 279/342 (81%), Gaps = 1/342 (0%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK DDILA+E R+KIRRVDPTLDMEAD+GDDY HLPDHGI RDG+KE+ + + 
Sbjct: 262  DEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQS 321

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGD-TRTVAEALASSKQAELASEISDENANQER 357
            E Y+RTL QDLNRHAAVVLEGR +DV   D TR +AEALA SK+    +E +D NAN+ER
Sbjct: 322  EHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKRG---NEGADNNANEER 378

Query: 358  LERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTS 537
            L+R  R+AEIEDLQAP  LP APL IKD REYFDSQQAN LKA  DS A  K   C ++ 
Sbjct: 379  LDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKASRDSQASMK---CSLSR 435

Query: 538  EQAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLP 717
            ++AY  +R+ ISE+K  GL DP+V PEVA KV +GLT  +SS KY+LGKNP+E+VLDRLP
Sbjct: 436  QEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLP 495

Query: 718  NRTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSD 897
            + TK++LL+HW SIQELLKHFWS+YP+TT YLY+KV+RLKDA++ IY +L+E+KES+ +D
Sbjct: 496  SATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPAD 555

Query: 898  FRHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGFV 1023
             RHQVSLLV+PM QALDAA  HYDAD+QKRS KSGE+PNG+V
Sbjct: 556  LRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYV 597


>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Citrus sinensis]
          Length = 597

 Score =  454 bits (1169), Expect = e-125
 Identities = 229/342 (66%), Positives = 279/342 (81%), Gaps = 1/342 (0%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK DDILA+E R+KIRRVDPTLDMEAD+GDDY HLPDHGI RDG+KE+ + + 
Sbjct: 262  DEELAVFLKEDDILANEVRKKIRRVDPTLDMEADEGDDYTHLPDHGIFRDGTKESNELQS 321

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGD-TRTVAEALASSKQAELASEISDENANQER 357
            E Y+RTL QDLNRHAAVVLEGR +DV   D TR +AEALA SK+    +E +D NAN+ER
Sbjct: 322  EHYRRTLLQDLNRHAAVVLEGRTIDVEREDSTRALAEALARSKRG---NEGADNNANEER 378

Query: 358  LERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTS 537
            L+R  R+AEIEDLQAP  LP APL IKD REYFDSQQAN LKA  D+ A  K   C ++ 
Sbjct: 379  LDRTPRVAEIEDLQAPHCLPLAPLSIKDAREYFDSQQANTLKASRDAQASMK---CSLSK 435

Query: 538  EQAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLP 717
            ++AY  +R+ ISE+K  GL DP+V PEVA KV +GLT  +SS KY+LGKNP+E+VLDRLP
Sbjct: 436  QEAYRSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLDRLP 495

Query: 718  NRTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSD 897
            + TK++LL+HW SIQELLKHFWS+YP+TT YLY+KV+RLKDA++ IY +L+E+KES+ +D
Sbjct: 496  SATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESLPAD 555

Query: 898  FRHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGFV 1023
             RHQVSLLV+PM QALDAA  HYDAD+QKRS KSGE+PNG++
Sbjct: 556  LRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYI 597


>ref|XP_007015592.1| BSD domain (BTF2-like transcription factors, Synapse-associated
            proteins and DOS2-like proteins), putative isoform 1
            [Theobroma cacao] gi|508785955|gb|EOY33211.1| BSD domain
            (BTF2-like transcription factors, Synapse-associated
            proteins and DOS2-like proteins), putative isoform 1
            [Theobroma cacao]
          Length = 646

 Score =  454 bits (1167), Expect = e-125
 Identities = 236/389 (60%), Positives = 276/389 (70%), Gaps = 49/389 (12%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK DDILASE+R KIRRVDPTLDM+AD+GDDY HLPDHGI RDGSKE T+SE 
Sbjct: 257  DEELAVFLKQDDILASESRSKIRRVDPTLDMDADEGDDYTHLPDHGIFRDGSKEVTESEN 316

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            E Y+RTLSQD+NRHAAVVLEGRA+DV L DTR+VAEALA SKQ       S  + ++ERL
Sbjct: 317  ELYRRTLSQDINRHAAVVLEGRAVDVELEDTRSVAEALARSKQESSTKGESYGDTSRERL 376

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            +RVSRM EIEDLQAP  LP APLCIKDPR+YFDSQQ NAL+  GD +AG + I C ++S+
Sbjct: 377  DRVSRMTEIEDLQAPNNLPLAPLCIKDPRDYFDSQQVNALRTSGDELAGTEQIKCSLSSQ 436

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            + Y  LRE IS +KA GL DP+VKPEVAH+V   LTQ +S+TKYN+GKNPQESVLDRLP 
Sbjct: 437  EVYGSLRESISVIKAMGLKDPIVKPEVAHQVFDALTQSISTTKYNIGKNPQESVLDRLPK 496

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQ---------- 870
            + K+ELLHHWTSI ELL+HFW++YP+TT+YLY KV+         Y KL+          
Sbjct: 497  KIKEELLHHWTSILELLRHFWASYPITTSYLYTKVNAALVLTLLSYQKLEAGKQTEGCHV 556

Query: 871  ---------------------------------------EIKESVQSDFRHQVSLLVQPM 933
                                                   EIK SV SD RHQVSLL++PM
Sbjct: 557  TYLSTARVVLSNYPQVPFISSLLFYLLGSSDAKASYVWMEIKGSVPSDLRHQVSLLIRPM 616

Query: 934  LQALDAAFAHYDADMQKRSTKSGERPNGF 1020
             QALDAA  HY+ADMQKRS +SGERPNG+
Sbjct: 617  HQALDAAIQHYEADMQKRSARSGERPNGY 645


>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
            gi|462419824|gb|EMJ24087.1| hypothetical protein
            PRUPE_ppa003591mg [Prunus persica]
          Length = 563

 Score =  447 bits (1150), Expect = e-123
 Identities = 230/340 (67%), Positives = 270/340 (79%), Gaps = 1/340 (0%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELA+FLK D ILASEARRKIRRVDPTLDMEADQGDDY HLPDHGI RDGSK+ T+ + 
Sbjct: 231  DEELAIFLKEDAILASEARRKIRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKDVTELQN 290

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            E Y+RTLSQDLNR  AVVL+GR +DV L D RTVAEAL  S++       SDE+A QERL
Sbjct: 291  ELYRRTLSQDLNRQGAVVLQGRTVDVDLEDPRTVAEALMQSRRE------SDESAEQERL 344

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            +R++RM EIEDLQ     P A LCIKDPR+YFD+QQ NALK L DS  G +   C +T+E
Sbjct: 345  DRITRMTEIEDLQEHHDHPVAQLCIKDPRDYFDTQQVNALKTLDDSRTGTEQKKCSLTTE 404

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            +AY  LRE IS++K+ GL +  V PE+A  VL GLTQ +SSTKY LGKNPQ+SVLD LPN
Sbjct: 405  EAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGLTQNISSTKYQLGKNPQDSVLDSLPN 464

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
            +TK+ELLHHW SIQELL+HFWS+YP+TT YL  KV RLKDAM++IY +L+EIK   QSDF
Sbjct: 465  KTKEELLHHWISIQELLRHFWSSYPITTTYLSTKVGRLKDAMSQIYRQLEEIK---QSDF 521

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKS-GERPNG 1017
            RHQVSLLV+PM QALDAAF H+DAD+QKR+ +S GE PNG
Sbjct: 522  RHQVSLLVRPMHQALDAAFQHFDADLQKRAARSGGETPNG 561


>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
          Length = 409

 Score =  444 bits (1141), Expect = e-122
 Identities = 218/332 (65%), Positives = 267/332 (80%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK DD+LA EARRK+RRVDPT+DM+AD+GDDYIHL DHG++ D  K+  +S+Y
Sbjct: 77   DEELAVFLKRDDMLADEARRKVRRVDPTVDMQADEGDDYIHLQDHGLVHDEPKDYMESQY 136

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            E ++++ SQDLN+H AVVL+GR LD  L DTR+VAEA+   KQAEL+ E+S  N  ++  
Sbjct: 137  EPFRKSFSQDLNQHGAVVLQGRVLDAELRDTRSVAEAIIRIKQAELSDEVSTRNLERDIS 196

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            +R+SRMAE+EDLQ PR    APL IKDPR+YFDSQQANALKAL D   G + +   ++S 
Sbjct: 197  DRISRMAEMEDLQGPRDPAVAPLSIKDPRDYFDSQQANALKALADGSGGERTLKSSVSSH 256

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            +AY  L+ L+S  +  GL +PV+  EVA KVL+ LTQ +SSTK++LG NP ESVLDRLP 
Sbjct: 257  EAYGSLKNLVSHNRVMGLTEPVMSHEVALKVLSALTQNISSTKFHLGSNPHESVLDRLPK 316

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
             TKDELL  WTS+QELLKHFWS+YP+TT YLY KV+R+KDAM++IY KLQEIKESV SDF
Sbjct: 317  STKDELLIQWTSVQELLKHFWSSYPITTKYLYTKVTRMKDAMSQIYLKLQEIKESVPSDF 376

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTK 996
            RHQVSLLV PMLQALDAAFAHYDAD+Q+RSTK
Sbjct: 377  RHQVSLLVHPMLQALDAAFAHYDADVQRRSTK 408


>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
            gi|550334091|gb|EEE90962.2| transcription factor-related
            family protein [Populus trichocarpa]
          Length = 603

 Score =  442 bits (1138), Expect = e-121
 Identities = 226/342 (66%), Positives = 278/342 (81%), Gaps = 2/342 (0%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELA+FLK DDILASE RRKIR VDPTL+MEAD+GDDY HLPDHGI+RDGSKE T+S++
Sbjct: 261  DEELALFLKPDDILASETRRKIRCVDPTLNMEADEGDDYTHLPDHGIVRDGSKEITESQH 320

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVA-LGDTRTVAEALASSKQAELAS-EISDENANQE 354
            E Y RTLSQ+LNRHAAVVL+G  +D   L DT+TVAEAL  SKQ + AS E +D NANQ+
Sbjct: 321  ELYIRTLSQELNRHAAVVLQGTPIDEEQLKDTQTVAEALKQSKQGQNASNEETDMNANQD 380

Query: 355  RLERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMT 534
            RL R+S+M EI+DLQA   LP APL IKDPR+YFDSQQA ALK   D+  G  P+   ++
Sbjct: 381  RLSRISKMMEIDDLQASSDLPLAPLSIKDPRDYFDSQQATALKNSRDTSIGTDPVKRILS 440

Query: 535  SEQAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRL 714
            +E++Y+ LR+ IS +K  GL DP++KPEVA KVL+ LT  +SSTKY+ GKN   SVLD L
Sbjct: 441  AEESYASLRDSISLIKTTGLVDPIIKPEVAVKVLSVLTHNISSTKYDTGKNHGLSVLDTL 500

Query: 715  PNRTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQS 894
            PN  K+ELL+HWTS+QELLKH+WS+YP+TT YLY KVSRLKDAM++I S+LQE+KESVQS
Sbjct: 501  PNTIKEELLYHWTSLQELLKHYWSSYPITTTYLYTKVSRLKDAMSKIDSQLQELKESVQS 560

Query: 895  DFRHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGF 1020
            D RHQV+LL++PM QAL+AA  HYDA++QKRS +SG+R NG+
Sbjct: 561  DLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSGDRSNGY 602


>ref|NP_001061583.1| Os08g0338200 [Oryza sativa Japonica Group]
            gi|38636938|dbj|BAD03200.1| unknown protein [Oryza sativa
            Japonica Group] gi|113623552|dbj|BAF23497.1| Os08g0338200
            [Oryza sativa Japonica Group]
            gi|215686948|dbj|BAG90767.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 604

 Score =  429 bits (1104), Expect = e-117
 Identities = 217/340 (63%), Positives = 271/340 (79%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELA+FLK+DDILA EAR KI+RVDPTLDMEAD GDDYIHLPDHGI+RDGSKET D++ 
Sbjct: 267  DEELAIFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIHLPDHGIIRDGSKETIDNDG 326

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            E  +RTLSQDLNRHAAVVLEGR+ DV L DT+TVAEA+A SK+   +S ISD+  N ERL
Sbjct: 327  ELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEAIARSKKEPPSSSISDDT-NHERL 385

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
             +V+RM EIEDLQAPR LP+APLCIKDPREYFDSQQANAL++LG +  G    NC ++++
Sbjct: 386  VKVARMTEIEDLQAPRSLPYAPLCIKDPREYFDSQQANALRSLGGNNDGRHARNCRLSTD 445

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
             A+  L   IS +K  GL  PV++ +VA KVL  L + +S ++    KNPQ+S+L ++P 
Sbjct: 446  DAFDHLLGQISSIKVNGLNYPVIQSDVALKVLNELNEGISRSRRLNLKNPQDSLLGQIPR 505

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
            RT+DEL+ HW +IQELL+HFWS+YP+TT+ LYNKV R+KDAM +IY KLQ+IKES Q D 
Sbjct: 506  RTRDELMDHWAAIQELLQHFWSSYPITTSVLYNKVQRIKDAMTQIYQKLQDIKESAQPDV 565

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGF 1020
            RH++S LV+PM QALDAAF H D + Q++S+KSG +PNGF
Sbjct: 566  RHEISQLVKPMTQALDAAFNH-DLEQQQKSSKSGNKPNGF 604


>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
            communis] gi|223529828|gb|EEF31761.1| TFIIH basal
            transcription factor complex subunit, putative [Ricinus
            communis]
          Length = 597

 Score =  428 bits (1100), Expect = e-117
 Identities = 223/343 (65%), Positives = 272/343 (79%), Gaps = 3/343 (0%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELA+FLK DDILASE R+KIR VDPTLDMEADQGDDY HLPDHGI+RDGSK+  +S++
Sbjct: 257  DEELALFLKPDDILASETRQKIRCVDPTLDMEADQGDDYTHLPDHGIVRDGSKDVIESQH 316

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALD-VALGDTRTVAEALASSKQA-ELASEISDENANQE 354
            E Y+RTL QDLNRHAAVVLEG A+D   L DT+ VA+ALA SK+  +  +  +D NANQE
Sbjct: 317  EPYRRTLLQDLNRHAAVVLEGTAIDDEQLQDTKAVADALARSKRGIKTINREADGNANQE 376

Query: 355  RLERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMT 534
            R  R+S+M EIEDLQ       APLCIKDPR+YFDSQQA+ALK   D  +G +   C ++
Sbjct: 377  RSNRISQMMEIEDLQGSNDHHLAPLCIKDPRDYFDSQQASALKNSRDIPSGTEAARCSLS 436

Query: 535  SEQAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRL 714
            S++AY+ LR+ I++ KA GL DP+VKPE+A KVL+ LT  +SSTKY+LGKN +ESVLDRL
Sbjct: 437  SQEAYASLRDSITQTKAMGLNDPIVKPEIATKVLSILTHNISSTKYHLGKNSRESVLDRL 496

Query: 715  PNRTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQS 894
            PN  K+ELLHHW SI+ELL+H+WS+YP+TTAYLY KVSRLKDAM++I S+LQE+KESVQS
Sbjct: 497  PNTIKEELLHHWMSIEELLRHYWSSYPITTAYLYAKVSRLKDAMSKIDSQLQEMKESVQS 556

Query: 895  DFR-HQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGF 1020
            D   H  SL + P   AL+AA  HYDAD+QKRS KS ERPNG+
Sbjct: 557  DLXFHATSLGIVP---ALEAAMQHYDADLQKRSAKSAERPNGY 596


>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
            [Arabidopsis thaliana]
            gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
            Full=Probable RNA polymerase II transcription factor B
            subunit 1-1; AltName: Full=General transcription and DNA
            repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
            Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332195172|gb|AEE33293.1| probable RNA polymerase II
            transcription factor B subunit 1-1 [Arabidopsis thaliana]
          Length = 591

 Score =  426 bits (1094), Expect = e-116
 Identities = 215/341 (63%), Positives = 263/341 (77%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK D+ILA E R KIRRVDPTLDMEADQGDDY HL DHGI RDG+ +  + + 
Sbjct: 257  DEELAVFLKPDEILARETRHKIRRVDPTLDMEADQGDDYTHLMDHGIQRDGTMDVVEPQN 316

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            +Q+KR+L QDLNRHAAVVLEGR++DV   DTR VAEAL   KQ   A   + ++ANQERL
Sbjct: 317  DQFKRSLLQDLNRHAAVVLEGRSIDVESEDTRIVAEALTRVKQVSKADGETTKDANQERL 376

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            ER+SR+A +EDLQAP+  P APL IKDPR+YF+SQQ N L        GAK +       
Sbjct: 377  ERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNV----PRGAKGLK--RNVH 430

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            +AY  L+E I E++A GL DP++KPEV+ +V + LT+ +++ K   GKNP+ES LDRLP 
Sbjct: 431  EAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKNINGKNPRESFLDRLPK 490

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
             TKDE+LHHWTSIQELLKHFWS+YP+TT YL+ KV +LKDAM+  YSKL+ +KESVQSD 
Sbjct: 491  STKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDL 550

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGFV 1023
            RHQVSLLV+PM QALDAAF HY+ D+Q+R+ KSGERPNG+V
Sbjct: 551  RHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPNGYV 591


>ref|XP_006660062.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Oryza brachyantha]
          Length = 621

 Score =  425 bits (1092), Expect = e-116
 Identities = 217/340 (63%), Positives = 268/340 (78%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK+DDILA EAR KI+RVDPTLDMEAD GDDYIHLPDHGI+RDGSKET +++ 
Sbjct: 284  DEELAVFLKNDDILAKEARLKIKRVDPTLDMEADAGDDYIHLPDHGIIRDGSKETIENDG 343

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            E  +RTLSQDLNRHAAVVLEGR+ DV L DT+TVAEALA SK+    S ISD+ ++ ERL
Sbjct: 344  ELARRTLSQDLNRHAAVVLEGRSSDVELTDTKTVAEALARSKREPPPSSISDDTSH-ERL 402

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
             +V+RM EIEDLQAPR +P+APLCIKDPREYFDSQQANAL++LG +  G    NC +++ 
Sbjct: 403  VKVARMTEIEDLQAPRSVPYAPLCIKDPREYFDSQQANALRSLGGNNDGRHARNCRLSAH 462

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
             A+  L   IS +K  GL  PVV+ +VA KVL  L   +S T+    KNPQ+S+L ++P 
Sbjct: 463  DAFDHLLGQISSIKVNGLNYPVVQSDVAFKVLNELNDGISRTRRLNLKNPQDSLLGQIPR 522

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
             T+DEL+ HWT+IQELL+HFWS+YP+TT+ LYNKV R+KDAM +IY KLQ IKES Q D 
Sbjct: 523  HTRDELMDHWTAIQELLRHFWSSYPITTSVLYNKVQRIKDAMTQIYQKLQNIKESAQPDV 582

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGF 1020
            RH++S LV+PM QALDAAF H + + Q++S+KSG +PNGF
Sbjct: 583  RHEISQLVKPMTQALDAAFNH-ELEQQQKSSKSGNKPNGF 621


>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
            gi|482575779|gb|EOA39966.1| hypothetical protein
            CARUB_v10008654mg [Capsella rubella]
          Length = 593

 Score =  425 bits (1092), Expect = e-116
 Identities = 214/343 (62%), Positives = 268/343 (78%), Gaps = 2/343 (0%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELAVFLK D+ILA E R+KIRRVDPTLDMEAD+GDDY HL DHGI RDG+++  + + 
Sbjct: 257  DEELAVFLKPDEILARETRQKIRRVDPTLDMEADEGDDYTHLMDHGIQRDGTRDVVEPQN 316

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
            EQ+KR+L QDLNRHAAVVLEGR++DV   DTR VAEAL   KQ   A   + ++ANQERL
Sbjct: 317  EQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRIVAEALTRVKQVSKADGETGKDANQERL 376

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
            ER+SR+A +EDLQAP+  P APL IKDPR+YF+SQQ N L A      G K +       
Sbjct: 377  ERMSRVAGMEDLQAPQNFPLAPLSIKDPRDYFESQQGNVLNA----PRGTKGLK--RNVH 430

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            +A+  L+E I E++A+GL DP++KPEV+ +V + LT+ +S+ K  +GKNP+ES LDRLP 
Sbjct: 431  EAFGLLKESIVEIRARGLSDPLIKPEVSFEVFSSLTRTISTAKNIIGKNPRESFLDRLPK 490

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
             TKDE+LHHWTSIQELL+HFWS+YP+TT YL+ KV +LKDAM+  YSKL+ +KESVQSD 
Sbjct: 491  STKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQSDL 550

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKS--GERPNGFV 1023
            RHQ+SLLV+PM QALDAAF HY+AD+Q+R+ KS  GERPNG+V
Sbjct: 551  RHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSGGERPNGYV 593


>ref|XP_002307021.1| transcription factor-related family protein [Populus trichocarpa]
            gi|222856470|gb|EEE94017.1| transcription factor-related
            family protein [Populus trichocarpa]
          Length = 586

 Score =  422 bits (1084), Expect = e-115
 Identities = 218/332 (65%), Positives = 264/332 (79%), Gaps = 1/332 (0%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DEELA+FLK D+ILASE R KIR VDPTLDMEAD+GDDY HLPDHGI+RDGSKE T+ ++
Sbjct: 261  DEELALFLKPDNILASETRWKIRGVDPTLDMEADEGDDYTHLPDHGIVRDGSKEITELQH 320

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVA-LGDTRTVAEALASSKQAELASEISDENANQER 357
            E  +RTLSQDLNRHAAVVL+G  +D   L DT+TVAEAL  SKQ       +D NANQ+R
Sbjct: 321  ELCRRTLSQDLNRHAAVVLQGTPIDEEQLKDTQTVAEALERSKQE------ADINANQDR 374

Query: 358  LERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTS 537
            L R  +M EI+DLQA   LP APL IKDPR+YFDSQQA+ALK   D+  G  P+ C ++ 
Sbjct: 375  LSRNLKMMEIDDLQASIDLPLAPLSIKDPRDYFDSQQASALKTSRDTSIGNDPVRCTLSV 434

Query: 538  EQAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLP 717
            E++Y+ LR+ IS +K  GL DP+V PEVA KVL  LT  +SSTKY+LGKNP  SVLD LP
Sbjct: 435  EESYASLRDSISHIKNTGLVDPMVTPEVAAKVLLVLTHNISSTKYDLGKNPGLSVLDTLP 494

Query: 718  NRTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSD 897
            N  K+EL++HWTS+QELL+H+WS+YP+TT YLYNKVSRLKDAM++I S+LQE+KESVQSD
Sbjct: 495  NSIKEELMYHWTSLQELLRHYWSSYPITTMYLYNKVSRLKDAMSKIDSQLQELKESVQSD 554

Query: 898  FRHQVSLLVQPMLQALDAAFAHYDADMQKRST 993
             RHQV+LL++PM QAL+ A  HYDADMQKRS+
Sbjct: 555  LRHQVTLLIRPMQQALEVAMQHYDADMQKRSS 586


>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
            1-1-like [Cicer arietinum]
          Length = 586

 Score =  421 bits (1081), Expect = e-115
 Identities = 216/341 (63%), Positives = 264/341 (77%)
 Frame = +1

Query: 1    DEELAVFLKHDDILASEARRKIRRVDPTLDMEADQGDDYIHLPDHGILRDGSKETTDSEY 180
            DE+LAVFLK D+IL +EAR+K+RRVDPTLDMEADQGDDY HLPDHGI RDGSKET +++ 
Sbjct: 253  DEDLAVFLKDDEILENEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFRDGSKETAEAQN 312

Query: 181  EQYKRTLSQDLNRHAAVVLEGRALDVALGDTRTVAEALASSKQAELASEISDENANQERL 360
              Y+RTL QDLNR + VVLEG+ LD+ +   RTVAE LA  KQ       SD    +ER 
Sbjct: 313  TFYRRTLLQDLNRQSEVVLEGKTLDMDMEHPRTVAEVLARRKQE------SDGVIEEERR 366

Query: 361  ERVSRMAEIEDLQAPRGLPFAPLCIKDPREYFDSQQANALKALGDSVAGAKPINCCMTSE 540
             R+S+M +IEDLQA     FAPLCIKDPR+YFDSQQ NALK+L DS+AG + I C + SE
Sbjct: 367  NRISKMTQIEDLQAQDDHRFAPLCIKDPRDYFDSQQVNALKSLDDSLAGKEQIRCNLGSE 426

Query: 541  QAYSFLRELISEMKAKGLCDPVVKPEVAHKVLTGLTQLLSSTKYNLGKNPQESVLDRLPN 720
            +AY  LRE IS++KA GL DP++ PEVA KVL GLT+ +SSTK +LGK+ QESVLD LPN
Sbjct: 427  EAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNGLTKNISSTKSHLGKSSQESVLDILPN 486

Query: 721  RTKDELLHHWTSIQELLKHFWSAYPVTTAYLYNKVSRLKDAMAEIYSKLQEIKESVQSDF 900
             TK++LL HW   QELL+HFWS+YPVTT  L NK  R+KDA+++IYSKL+EIK S +SD 
Sbjct: 487  TTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNKTKRMKDAISQIYSKLEEIKVSAKSDL 546

Query: 901  RHQVSLLVQPMLQALDAAFAHYDADMQKRSTKSGERPNGFV 1023
            RHQVSL+V PM QALDAA  HYDAD++KR+ + G +PNG+V
Sbjct: 547  RHQVSLVVHPMQQALDAALLHYDADVRKRNAR-GTKPNGYV 586