BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00015617
         (1071 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi...   315   2e-83
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu...   304   4e-80
ref|XP_007011706.1| Pentatricopeptide repeat-containing protein,...   303   8e-80
ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containi...   286   8e-75
ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containi...   283   1e-73
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,...   281   3e-73
ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containi...   276   8e-72
ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   274   4e-71
ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containi...   274   4e-71
ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containi...   274   5e-71
gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis]     273   7e-71
ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [A...   273   9e-71
ref|XP_007136936.1| hypothetical protein PHAVU_009G086500g [Phas...   269   2e-69
ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containi...   262   2e-67
ref|XP_004501390.1| PREDICTED: pentatricopeptide repeat-containi...   245   3e-62
ref|XP_006412544.1| hypothetical protein EUTSA_v10024264mg [Eutr...   236   9e-60
ref|XP_006282792.1| hypothetical protein CARUB_v10006400mg [Caps...   236   1e-59
ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arab...   236   1e-59
ref|XP_003603286.1| Pentatricopeptide repeat-containing protein ...   233   1e-58
ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thali...   232   2e-58

>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
            gi|296082142|emb|CBI21147.3| unnamed protein product
            [Vitis vinifera]
          Length = 1113

 Score =  315 bits (808), Expect = 2e-83
 Identities = 168/264 (63%), Positives = 205/264 (77%), Gaps = 3/264 (1%)
 Frame = +2

Query: 287  VMELCFSMICTTNVK--CSVPIDCKPTVLSNYWSTRRIKSGNLKVLTYGFLENWKKHERK 460
            V+ L  S  C +  K  C+V    KP+VLS   S   IK GNLKVL  G   NWKKH +K
Sbjct: 3    VIILSSSSSCCSKFKYGCAVT-GTKPSVLSCNESLGGIKIGNLKVLPSGCRVNWKKHRKK 61

Query: 461  NVGFCRFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHT 637
             VG C FV++SSF+ VV K K ++ +SS+EV   LKSI+DP +A SFF SVA  P ++HT
Sbjct: 62   QVGVCGFVIRSSFDVVVVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHT 121

Query: 638  TESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALE 817
            TE+CNY+LE+LR HRRVE+M VVF+LMQKQIIKR++ TYL IFK L + GG+R+AP+ALE
Sbjct: 122  TETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALE 181

Query: 818  NMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIR 997
             MR+ GFVLN +SY GLIHLLL+SGF R+A++VYRRMVSEGIKPSLKTYSALMVA GK R
Sbjct: 182  KMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRR 241

Query: 998  DTETVMGLLEEMQNLGLRPNVYTF 1069
            D ETVMGLL+EM++LGLRPN+YTF
Sbjct: 242  DIETVMGLLQEMESLGLRPNIYTF 265



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
 Frame = +2

Query: 497  FERVVKGKTKNGLSSDEV-IETLKSITDPIEALSFFQSV---ARQPNIVHTTESCNYMLE 664
            F R+VK   +  L S  + ++ L  +    +AL +F+ +      P++V      N M+ 
Sbjct: 951  FRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLV----CYNLMIN 1006

Query: 665  LLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVL 844
             L   +RVEE   +FD M+ + I  ++ TY  +   L + G + +A    E ++  G   
Sbjct: 1007 GLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEP 1066

Query: 845  NAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSAL 973
            N F+YN LI     SG   +A  VY++M+  G +P+  T++ L
Sbjct: 1067 NVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 39/128 (30%), Positives = 68/128 (53%)
 Frame = +2

Query: 686  VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 865
            VE    +F  M K+ I+ ++++Y I+   L + G +  A    E ++ +G   +   YN 
Sbjct: 944  VETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNL 1003

Query: 866  LIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLG 1045
            +I+ L +S    +A+ ++  M + GI P L TY+AL++  G     E    + EE+Q  G
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG 1063

Query: 1046 LRPNVYTF 1069
            L PNV+T+
Sbjct: 1064 LEPNVFTY 1071


>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
            gi|550337245|gb|EEE92232.2| hypothetical protein
            POPTR_0006s28060g [Populus trichocarpa]
          Length = 1115

 Score =  304 bits (779), Expect = 4e-80
 Identities = 151/226 (66%), Positives = 185/226 (81%), Gaps = 1/226 (0%)
 Frame = +2

Query: 395  KSGNLKVLTYGFLENWKKHERKNVGFCRFVMKSSFER-VVKGKTKNGLSSDEVIETLKSI 571
            K G L+V  +G   NWKK+ +K V FC F +KS  E  VV GK + G SSDEV+  L SI
Sbjct: 42   KFGTLRVFPFGSNVNWKKNNKKQVAFCGFALKSQNEELVVNGKPRKGSSSDEVLGVLHSI 101

Query: 572  TDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMET 751
            +DPI AL +F+SV   PN+VHTTE+CN+MLE+LR HRRVE+MA VFDLMQ+ II+RN++T
Sbjct: 102  SDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRHIIRRNVDT 161

Query: 752  YLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMV 931
            YLIIFK L + GG+RQAP ALE MR AGFVLNA+SYNGLIH LLQSGF ++A+EVYRRMV
Sbjct: 162  YLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMV 221

Query: 932  SEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            SEG+KPSLKT+SALMVASGK R+ +TVMGLLEEM+++GLRPN+YT+
Sbjct: 222  SEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTY 267



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 40/132 (30%), Positives = 74/132 (56%)
 Frame = +2

Query: 674  GHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 853
            GH  V+     F  M K+ I+ ++++Y I+   L + G +  A    E +++AG   +  
Sbjct: 944  GH--VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLV 1001

Query: 854  SYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEM 1033
            +YN +I+ L +S    +A+ ++  M + GI P L TY++L++  G +   E    + EE+
Sbjct: 1002 AYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEEL 1061

Query: 1034 QNLGLRPNVYTF 1069
            Q +GL+PNV+T+
Sbjct: 1062 QFIGLKPNVFTY 1073



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
 Frame = +2

Query: 497  FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 673
            F+R+VK   +  L S  ++  +  I   ++ AL +F+ + +Q  +     + N M+  L 
Sbjct: 953  FKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL-KQAGLDPDLVAYNLMINGLG 1011

Query: 674  GHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 853
              +R EE   +F  MQ + I  ++ TY  +   L + G I +A    E ++  G   N F
Sbjct: 1012 RSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVF 1071

Query: 854  SYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSAL 973
            +YN LI     SG    A  +Y++M+  G  P+  T++ L
Sbjct: 1072 TYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111


>ref|XP_007011706.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao] gi|508782069|gb|EOY29325.1| Pentatricopeptide
            repeat-containing protein, putative [Theobroma cacao]
          Length = 1112

 Score =  303 bits (776), Expect = 8e-80
 Identities = 161/264 (60%), Positives = 199/264 (75%), Gaps = 3/264 (1%)
 Frame = +2

Query: 287  VMELCFSMICTTNVKCS-VPIDCKPTVLSN-YWSTRRIKSGNLKVLTYGFLENWKKHERK 460
            V+ LC    C  ++  S +  D K +  S+ Y S    K+GNL+V  YG + +WKK  ++
Sbjct: 3    VLILCSMTACCNSLSYSCILADSKVSAFSHKYVSFGGRKNGNLEVWPYGCMVSWKKRRKQ 62

Query: 461  NVGFCRFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHT 637
             +GF  +VMK+S + VV  GK KN LSS+EV+  LKS TD   ALS+F+SVA  PN+VHT
Sbjct: 63   RLGF--YVMKNSCQMVVANGKCKNSLSSEEVLRVLKSFTDTKSALSYFKSVAELPNVVHT 120

Query: 638  TESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALE 817
            TE+CN+MLE+LR HR V  M+ VF+ MQKQIIKR++ TYL +FKGL + GG+RQAP  LE
Sbjct: 121  TETCNHMLEVLRAHRMVGAMSFVFEFMQKQIIKRDLNTYLTVFKGLDIRGGLRQAPFGLE 180

Query: 818  NMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIR 997
             MR AGFVLNA+SYNGLIHLLLQSGF R+A+EVYRRMVSEG+KPSLKTYSALMVASGK R
Sbjct: 181  RMRNAGFVLNAYSYNGLIHLLLQSGFSREALEVYRRMVSEGLKPSLKTYSALMVASGKRR 240

Query: 998  DTETVMGLLEEMQNLGLRPNVYTF 1069
            D  TVM LLEEM+ LGL+PN+YTF
Sbjct: 241  DIGTVMDLLEEMETLGLKPNIYTF 264



 Score = 68.6 bits (166), Expect = 4e-09
 Identities = 41/128 (32%), Positives = 70/128 (54%)
 Frame = +2

Query: 686  VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 865
            V+    +F  M K+ I+ ++++Y I+   L + G +  A    E ++  G   +  SYN 
Sbjct: 943  VDAACELFKRMVKEGIRPDLKSYTILVDCLCLVGRVDDAMHYFEELKLTGLDPDLVSYNL 1002

Query: 866  LIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLG 1045
            +I+ L +SG   +A+ ++  M S GI P L TY++L++  G +   E      EE+Q +G
Sbjct: 1003 MINGLGRSGRVEEALSLFDEMWSRGISPDLYTYNSLILNLGTVGMVEQAGKFYEELQLMG 1062

Query: 1046 LRPNVYTF 1069
            L PNVYT+
Sbjct: 1063 LEPNVYTY 1070


>ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Citrus sinensis]
          Length = 1107

 Score =  286 bits (733), Expect = 8e-75
 Identities = 151/234 (64%), Positives = 181/234 (77%), Gaps = 1/234 (0%)
 Frame = +2

Query: 371  NYWSTRRIKSGNLKVLTYGFLENWKKHERKNVGFCRFVMKSSFERVV-KGKTKNGLSSDE 547
            N  S   +K GNLKV       NWKKH +K VGFC +VMKSS E VV KGK +NGL+S+E
Sbjct: 33   NNGSVGGLKVGNLKV-------NWKKHWKKQVGFCGYVMKSSNEVVVVKGKPRNGLTSEE 85

Query: 548  VIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQ 727
            VI  L+S +D     S+F+SVA  P +VHTTE+CNYMLE+LR + RV +M VVFDLMQKQ
Sbjct: 86   VIRVLRSFSDLDSTYSYFKSVAELPYVVHTTETCNYMLEVLRVYGRVTDMVVVFDLMQKQ 145

Query: 728  IIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQA 907
            II R++ TYL IFK L + GG+R+A  ALE MR AGFVLNA+SYNG IH +LQSGF R+A
Sbjct: 146  IINRDLSTYLTIFKALSLKGGLRRASFALEKMRAAGFVLNAYSYNGFIHFILQSGFCREA 205

Query: 908  MEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            + VY+R+VSEGIKPSLKTYSALMVA+GK R+ +TVM LLEEM+ LGLRPNVYTF
Sbjct: 206  LAVYKRVVSEGIKPSLKTYSALMVAAGKRRNIKTVMNLLEEMERLGLRPNVYTF 259



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 39/128 (30%), Positives = 69/128 (53%)
 Frame = +2

Query: 686  VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 865
            VE    +F  M K  I+ ++++Y ++   L + G +  A    E ++  G   +  SYN 
Sbjct: 938  VETACELFKQMIKGGIRPDLKSYSVLVDCLCMVGRVDDALHYFEELKLNGLDADTISYNF 997

Query: 866  LIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLG 1045
            +I+ L +SG   +A+ ++  M   GI P L TY++L++  G+    E    L E++Q +G
Sbjct: 998  MINGLGRSGRIEEALSLFDEMKKRGISPDLYTYNSLILNLGRAGMVEEARKLYEQLQEMG 1057

Query: 1046 LRPNVYTF 1069
            L PNV+T+
Sbjct: 1058 LEPNVFTY 1065



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
 Frame = +2

Query: 497  FERVVKGKTKNGLSSDEV-IETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 673
            F++++KG  +  L S  V ++ L  +    +AL +F+ + +   +   T S N+M+  L 
Sbjct: 945  FKQMIKGGIRPDLKSYSVLVDCLCMVGRVDDALHYFEEL-KLNGLDADTISYNFMINGLG 1003

Query: 674  GHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 853
               R+EE   +FD M+K+ I  ++ TY  +   L   G + +A    E ++  G   N F
Sbjct: 1004 RSGRIEEALSLFDEMKKRGISPDLYTYNSLILNLGRAGMVEEARKLYEQLQEMGLEPNVF 1063

Query: 854  SYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSAL 973
            +YN LI     SG    A  VY +M+  G  P+  T++ L
Sbjct: 1064 TYNALIRGYGTSGNPDSAYAVYEKMMVGGCSPNPGTFAQL 1103



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 40/140 (28%), Positives = 69/140 (49%)
 Frame = +2

Query: 650  NYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRR 829
            N +L+      RVEE+  +++ M  +  K N  ++ I+  GL     I +A     N+  
Sbjct: 821  NLLLDGYGKSGRVEELLKLYEEMSFRGCKPNTISHNIVISGLVKSNSIDKAMDLFYNLVS 880

Query: 830  AGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTET 1009
             GF     +Y  LI  L +SG   +A +++  M+  G KP+   Y+ L+   GK  D ET
Sbjct: 881  GGFSPTPCTYGPLIDGLSKSGRLEEAKKLFEEMLDYGCKPNCVIYNILINGFGKTGDVET 940

Query: 1010 VMGLLEEMQNLGLRPNVYTF 1069
               L ++M   G+RP++ ++
Sbjct: 941  ACELFKQMIKGGIRPDLKSY 960


>ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1131

 Score =  283 bits (723), Expect = 1e-73
 Identities = 151/282 (53%), Positives = 194/282 (68%), Gaps = 21/282 (7%)
 Frame = +2

Query: 287  VMELCFSMICTTNVKCSVPIDCKPTVLSNYW--------------------STRRIKSGN 406
            V+ L  S IC  N  C    + + +   N W                    S   + +GN
Sbjct: 3    VIVLSSSAICCNNFNCVSVTETRQSTGGNGWLNCDKIRKKHVGSSRFVMKCSNDVVLAGN 62

Query: 407  LKVLTYGFLENWKKHERKNVGFCRFVMKSSFERV-VKGKTKNGLSSDEVIETLKSITDPI 583
            L     G + N     +K+VG  RF MK S + V V GK +NG+S++ V+  L+SI++P 
Sbjct: 63   LNFFPGGSVVNCDTIRKKHVGSSRFFMKCSSDVVLVNGKPRNGISAEGVLRNLRSISEPT 122

Query: 584  EALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLII 763
            EAL+ F+SVA  P +VHTT++CNYMLE LR   R+ +MAVVFDLMQKQII R+++TYLII
Sbjct: 123  EALALFKSVAEMPRVVHTTKTCNYMLEFLRVLERINDMAVVFDLMQKQIIYRSLDTYLII 182

Query: 764  FKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGI 943
            FKGL + GGIR+AP ALE M++AGFVLNA+SYNGLIHL+LQ+GF ++A++VYRRM+SE +
Sbjct: 183  FKGLHIRGGIREAPFALERMKKAGFVLNAYSYNGLIHLILQAGFWQEALKVYRRMISEKL 242

Query: 944  KPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            KPSLKTYSALMVA GK RDTETVM LL EM+ LGLRPN+YTF
Sbjct: 243  KPSLKTYSALMVACGKRRDTETVMRLLSEMEGLGLRPNIYTF 284



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 36/138 (26%), Positives = 69/138 (50%)
 Frame = +2

Query: 656  MLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 835
            +++ L   R+V++    F+ ++   +  ++ +Y ++  GL   G +++A   L+ M+  G
Sbjct: 989  LVDCLCSARKVDDALHYFEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRG 1048

Query: 836  FVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVM 1015
               N ++YN LI  L   G   +A  +Y  +   G++P + TY+AL+    K  D +   
Sbjct: 1049 ITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQLGLEPDVFTYNALIRGYSKSGDPDGAY 1108

Query: 1016 GLLEEMQNLGLRPNVYTF 1069
             + E+M   G  PN  TF
Sbjct: 1109 AIYEKMMVGGCSPNSGTF 1126


>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1113

 Score =  281 bits (719), Expect = 3e-73
 Identities = 149/263 (56%), Positives = 189/263 (71%), Gaps = 9/263 (3%)
 Frame = +2

Query: 308  MICTTNVKCS--------VPIDCKPTVLSNYWSTRRIKSGNLKVLTYGFLENWKKHERKN 463
            +IC++N+  +          ++  P  + N   ++  +  NL  LT G L  W+KH+ + 
Sbjct: 5    IICSSNIYYASVNYGYTFTKVNTFPAFIHNNGISKGRRVRNLNFLTCGSLSIWEKHKERQ 64

Query: 464  VGFCRFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTT 640
            VGF    +KSS   VV K K KN LSS EV+  L SI DP +A S+F SVA  P +VHTT
Sbjct: 65   VGFGGVAVKSSHGLVVAKRKPKNALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTT 124

Query: 641  ESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALEN 820
            E+CN+MLE+LR HRRV +M VVF+LMQ QIIKR++ TYLIIFKGL + GG+RQ P A   
Sbjct: 125  ETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGK 184

Query: 821  MRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRD 1000
            MR AGF LNA+SYNGLIHLLLQSG  R+A+E+YRRMV EG+KPSLKT+SALMVA+GK RD
Sbjct: 185  MREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRD 244

Query: 1001 TETVMGLLEEMQNLGLRPNVYTF 1069
            TETV  LLEEM++LGL+PN+YT+
Sbjct: 245  TETVKSLLEEMESLGLKPNIYTY 267



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 38/122 (31%), Positives = 67/122 (54%)
 Frame = +2

Query: 704  VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 883
            +F  M ++ I+ ++++Y  +   L   G +  A    E +++ G  L++ +YN +I  L 
Sbjct: 952  LFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLG 1011

Query: 884  QSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVY 1063
            +S    +A+ +Y  M S GI P L TY++L++  G     E    L EE+Q +GL PNV+
Sbjct: 1012 RSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVF 1071

Query: 1064 TF 1069
            T+
Sbjct: 1072 TY 1073



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 40/130 (30%), Positives = 66/130 (50%)
 Frame = +2

Query: 584  EALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLII 763
            +AL +F+ + +Q  +   + + N M++ L    R+EE   ++D MQ + I  ++ TY  +
Sbjct: 983  DALHYFEKL-KQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041

Query: 764  FKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGI 943
               L V G + QA    E ++  G   N F+YN LI     SG    A  VY+RM+  G 
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101

Query: 944  KPSLKTYSAL 973
             P+  T++ L
Sbjct: 1102 SPNTGTFAQL 1111


>ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Glycine max]
          Length = 1113

 Score =  276 bits (707), Expect = 8e-72
 Identities = 147/263 (55%), Positives = 188/263 (71%), Gaps = 2/263 (0%)
 Frame = +2

Query: 287  VMELCFSMICTTNVK-CSVPIDCKPTVLSNYWSTRRIKSGNLKVLTYGFLENWKKHERKN 463
            V+ LC S IC++++  C         V+SN           +K    G    WKKH ++ 
Sbjct: 3    VLVLCSSTICSSSLSSCCAFSGTNVYVMSNNGFFGETPFFKMKSFPNGSSVIWKKHGKRQ 62

Query: 464  VGFCRFVMKSSFERVV-KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTT 640
            +G   F  + + E VV  GK+K+ +SS+EVI  LKSI+DP  ALS+F+ V++ PNIVHT 
Sbjct: 63   LGLRVFETRCAHEVVVVNGKSKSSVSSEEVIGALKSISDPNSALSYFKMVSQLPNIVHTP 122

Query: 641  ESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALEN 820
            E+CNYMLE LR H RVE+MA VFDLMQKQ+I RN  TYL IFK L + GGIRQAP AL  
Sbjct: 123  ETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGK 182

Query: 821  MRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRD 1000
            MR+AGFVLNA+SYNGLI+ LLQ GF ++A++VY+RM+SEG+KPS+KTYSALMVA G+ RD
Sbjct: 183  MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRD 242

Query: 1001 TETVMGLLEEMQNLGLRPNVYTF 1069
            T T+M LLEEM+ LGLRPN+YT+
Sbjct: 243  TGTIMDLLEEMETLGLRPNIYTY 265



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 39/138 (28%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
 Frame = +2

Query: 665  LLRGHRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 835
            L+ G  +   + +  DL ++ I   I+ ++++Y I+ + L + G +  A    E ++  G
Sbjct: 934  LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993

Query: 836  FVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVM 1015
               +  SYN +I+ L +S    +A+ ++  M + GI P L TY+AL++  G     +   
Sbjct: 994  LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053

Query: 1016 GLLEEMQNLGLRPNVYTF 1069
             + EE+Q +GL PNV+T+
Sbjct: 1054 KMFEELQFMGLEPNVFTY 1071


>ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  274 bits (701), Expect = 4e-71
 Identities = 135/212 (63%), Positives = 171/212 (80%), Gaps = 1/212 (0%)
 Frame = +2

Query: 437  NWKKHERKNVGFCRFVMKSSFE-RVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVA 613
            NWKKH +K   FCR  +++  +  VVKGKT+  +S DEV+  LKS+TDPI ALS+F S++
Sbjct: 54   NWKKHRKKRKDFCRLALQNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSIS 113

Query: 614  RQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGI 793
              P ++HTTE+CN+MLE LR H +VE+MA VF+ MQK+II+R+++TYL IFK L + GG+
Sbjct: 114  EFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGL 173

Query: 794  RQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSAL 973
            RQ    L  MR+AGFVLNA+SYNGLIHLL+QSGF  +A+EVYRRMVSEG+KPSLKTYSAL
Sbjct: 174  RQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSAL 233

Query: 974  MVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            MVA GK RD+E VM LL+EM++LGLRPNVYTF
Sbjct: 234  MVALGKKRDSEMVMVLLKEMEDLGLRPNVYTF 265



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
 Frame = +2

Query: 644  SCNYMLELLRGHRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLAL 814
            +C     L+ G+ ++ +      L ++ +   I+ ++++Y I+   L + G + +A    
Sbjct: 927  NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986

Query: 815  ENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKI 994
              ++  G   +  +YN +I+ L +S    +A+ +Y  M + GI P L TY++LM+  G  
Sbjct: 987  NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046

Query: 995  RDTETVMGLLEEMQNLGLRPNVYTF 1069
               E    + EE+Q  GL P+V+T+
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTY 1071



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 7/202 (3%)
 Frame = +2

Query: 485  MKSSFERVVKGKTKNGLSSDEVI--ETLKSITD--PIEALSFFQSVARQPNIVHTTESCN 652
            ++++ E  VK K  NG   D+VI    L    D   ++    F S       +    +  
Sbjct: 313  LENAKELFVKMKA-NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371

Query: 653  YMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 832
             ++++L   R  +E    FD+M+KQ I  N+ TY  +  GL   G I  A   L+ M   
Sbjct: 372  ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESV 431

Query: 833  GFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVA---SGKIRDT 1003
            G    A++Y   I    +SG   +A+E + +M ++GI P++   +A + +    G++R+ 
Sbjct: 432  GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491

Query: 1004 ETVMGLLEEMQNLGLRPNVYTF 1069
            +T+   L E    GL P+  T+
Sbjct: 492  KTMFNGLREN---GLAPDSVTY 510


>ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  274 bits (701), Expect = 4e-71
 Identities = 135/212 (63%), Positives = 171/212 (80%), Gaps = 1/212 (0%)
 Frame = +2

Query: 437  NWKKHERKNVGFCRFVMKSSFE-RVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVA 613
            NWKKH +K   FCR  +++  +  VVKGKT+  +S DEV+  LKS+TDPI ALS+F S++
Sbjct: 54   NWKKHRKKRKDFCRLALQNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSIS 113

Query: 614  RQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGI 793
              P ++HTTE+CN+MLE LR H +VE+MA VF+ MQK+II+R+++TYL IFK L + GG+
Sbjct: 114  EFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGL 173

Query: 794  RQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSAL 973
            RQ    L  MR+AGFVLNA+SYNGLIHLL+QSGF  +A+EVYRRMVSEG+KPSLKTYSAL
Sbjct: 174  RQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSAL 233

Query: 974  MVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            MVA GK RD+E VM LL+EM++LGLRPNVYTF
Sbjct: 234  MVALGKKRDSEMVMVLLKEMEDLGLRPNVYTF 265



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 7/202 (3%)
 Frame = +2

Query: 485  MKSSFERVVKGKTKNGLSSDEVI--ETLKSITD--PIEALSFFQSVARQPNIVHTTESCN 652
            ++++ E  VK K  NG   D+VI    L    D   ++    F S       +    +  
Sbjct: 313  LENAKELFVKMKA-NGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFT 371

Query: 653  YMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRA 832
             ++++L   R  +E    FD+M+KQ I  N+ TY  +  GL   G I  A   L  M   
Sbjct: 372  ILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESV 431

Query: 833  GFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVA---SGKIRDT 1003
            G    A++YN  I    +SG   +A+E + +M ++GI P++   +A + +    G++R+ 
Sbjct: 432  GVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491

Query: 1004 ETVMGLLEEMQNLGLRPNVYTF 1069
            +T+   L E    GL P+  T+
Sbjct: 492  KTMFNGLREN---GLAPDSVTY 510



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 37/145 (25%), Positives = 74/145 (51%), Gaps = 3/145 (2%)
 Frame = +2

Query: 644  SCNYMLELLRGHRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLAL 814
            +C     L+ G+ ++ +      L ++ +   I+ ++++Y I+   L + G + +A    
Sbjct: 927  NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986

Query: 815  ENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKI 994
              ++  G   +  +YN +I+ L +S    +A+ +Y  M + GI P L TY++LM+  G  
Sbjct: 987  NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046

Query: 995  RDTETVMGLLEEMQNLGLRPNVYTF 1069
               E    + EE+Q  GL P+V+T+
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTY 1071


>ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Solanum tuberosum]
          Length = 1080

 Score =  274 bits (700), Expect = 5e-71
 Identities = 140/223 (62%), Positives = 176/223 (78%), Gaps = 1/223 (0%)
 Frame = +2

Query: 404  NLKVLTYGFLENWKKHERKNVGFCRFVMKSSFERV-VKGKTKNGLSSDEVIETLKSITDP 580
            NL     G + N  K  +K V    FVMK S + V V GK +NG+S++ ++  L+SI++P
Sbjct: 11   NLNFFPGGSVLNCNKIRKKYVVTSSFVMKCSNDVVLVNGKPRNGISAEGLLRNLRSISEP 70

Query: 581  IEALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLI 760
             EAL+ F+SVA  P +VHTTE+CNYMLE LR   R+ +MAVVFDLMQKQII R+++TYLI
Sbjct: 71   TEALALFKSVAEMPRVVHTTETCNYMLEYLRVLERINDMAVVFDLMQKQIIYRSLDTYLI 130

Query: 761  IFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEG 940
            IFKGL + GGIR+AP ALE M++AGFVLNA+SYNGLIHL+LQ+GF ++A++VYRRM+SE 
Sbjct: 131  IFKGLHIRGGIREAPFALERMKKAGFVLNAYSYNGLIHLILQAGFWQEALKVYRRMISEK 190

Query: 941  IKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            +KPSLKTYSALMVA GK RDTETVM LL EM+ LGLRPN+YTF
Sbjct: 191  LKPSLKTYSALMVACGKRRDTETVMRLLSEMEGLGLRPNIYTF 233



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 36/138 (26%), Positives = 69/138 (50%)
 Frame = +2

Query: 656  MLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 835
            +++ L   R+V++    F+ ++   +  ++ +Y ++  GL   G +++A   L+ M+  G
Sbjct: 938  LVDCLCSARKVDDALHYFEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRG 997

Query: 836  FVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVM 1015
               N ++YN LI  L   G   +A  +Y  +   G++P + TY+AL+    K  D +   
Sbjct: 998  ITPNLYTYNTLIFNLGIVGMLEEAGRMYEELQQFGLEPDVFTYNALIRGYSKSGDPDGAY 1057

Query: 1016 GLLEEMQNLGLRPNVYTF 1069
             + E+M   G  PN  TF
Sbjct: 1058 AIYEKMMVGGCSPNSGTF 1075


>gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis]
          Length = 1098

 Score =  273 bits (699), Expect = 7e-71
 Identities = 147/225 (65%), Positives = 173/225 (76%), Gaps = 2/225 (0%)
 Frame = +2

Query: 401  GNLKVLTYGFLENWKKHERKNVGFCRFVMK--SSFERVVKGKTKNGLSSDEVIETLKSIT 574
            GN+KV   G+L   KK  RK VG   FVMK     ER V  +     S++EV   LKSI 
Sbjct: 31   GNVKVWACGYLVKQKKLRRKRVGLSGFVMKIPDEGERTVLVR-----SAEEVARVLKSIL 85

Query: 575  DPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETY 754
            DP  A S+F SVAR P +VHTT++CNYMLELLR + RVE+MAVVFD MQKQ+I RN+ TY
Sbjct: 86   DPNCAFSYFMSVARLPKVVHTTDTCNYMLELLRTNGRVEDMAVVFDFMQKQLINRNLNTY 145

Query: 755  LIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVS 934
            L IFKGL +  GIRQAP+ALE M RAGFVLNA+SYNGLI+L+LQ+G  R+A+ VY+RMVS
Sbjct: 146  LTIFKGLYIRVGIRQAPIALEKMSRAGFVLNAYSYNGLIYLILQTGSFREALVVYKRMVS 205

Query: 935  EGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            EG KPSLKTYSALMVA GK RDTETVMGLL+EM++LGLRPN+YTF
Sbjct: 206  EGFKPSLKTYSALMVAFGKRRDTETVMGLLQEMEDLGLRPNIYTF 250



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
 Frame = +2

Query: 497  FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 673
            F+R+VK   +  L S  ++     +   I+ AL +F+ + +   +   + S N M+  L 
Sbjct: 936  FKRMVKEGIRPDLKSYTILVDCLCLAGRIDDALHYFEEL-KLSGLNPDSVSYNLMINALG 994

Query: 674  GHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 853
              RRVEE   ++D M+ + I  ++ TY  +   L + G + QA    E ++  G   + F
Sbjct: 995  RSRRVEEALSLYDEMRSRRITPDLYTYNSLILNLGIAGMVEQAGSMYEELQLRGLEPDVF 1054

Query: 854  SYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSAL 973
            +YN LI     SG    A  VY++M+  G  P++ T++ L
Sbjct: 1055 TYNALIRAYSASGNPDHAYAVYKKMMIGGCSPNVSTFAQL 1094



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
 Frame = +2

Query: 584  EALSFFQSVAR---QPNIVHTTESCNYMLELLRGHRR---VEEMAVVFDLMQKQIIKRNM 745
            EA+ FF+ +     +PN       C     L+ G  +   VE   ++F  M K+ I+ ++
Sbjct: 896  EAMRFFEEMGDYGCKPN-------CAIFNILINGFGKAGDVETACMLFKRMVKEGIRPDL 948

Query: 746  ETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRR 925
            ++Y I+   L + G I  A    E ++ +G   ++ SYN +I+ L +S    +A+ +Y  
Sbjct: 949  KSYTILVDCLCLAGRIDDALHYFEELKLSGLNPDSVSYNLMINALGRSRRVEEALSLYDE 1008

Query: 926  MVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            M S  I P L TY++L++  G     E    + EE+Q  GL P+V+T+
Sbjct: 1009 MRSRRITPDLYTYNSLILNLGIAGMVEQAGSMYEELQLRGLEPDVFTY 1056



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 2/192 (1%)
 Frame = +2

Query: 500  ERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNY--MLELLR 673
            E + +G   N ++ + VI +L    +  +A+ F+  +        +   C Y  +++ L 
Sbjct: 833  EMISRGCKPNTITYNIVISSLVKSDNVDKAIDFYYDLVSGD---FSPSPCTYGPLIDGLL 889

Query: 674  GHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 853
              RR EE    F+ M     K N   + I+  G    G +  A +  + M + G   +  
Sbjct: 890  KSRRQEEAMRFFEEMGDYGCKPNCAIFNILINGFGKAGDVETACMLFKRMVKEGIRPDLK 949

Query: 854  SYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEM 1033
            SY  L+  L  +G    A+  +  +   G+ P   +Y+ ++ A G+ R  E  + L +EM
Sbjct: 950  SYTILVDCLCLAGRIDDALHYFEELKLSGLNPDSVSYNLMINALGRSRRVEEALSLYDEM 1009

Query: 1034 QNLGLRPNVYTF 1069
            ++  + P++YT+
Sbjct: 1010 RSRRITPDLYTY 1021


>ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [Amborella trichopoda]
            gi|548847948|gb|ERN07051.1| hypothetical protein
            AMTR_s00019p00039970 [Amborella trichopoda]
          Length = 1123

 Score =  273 bits (698), Expect = 9e-71
 Identities = 142/222 (63%), Positives = 177/222 (79%)
 Frame = +2

Query: 404  NLKVLTYGFLENWKKHERKNVGFCRFVMKSSFERVVKGKTKNGLSSDEVIETLKSITDPI 583
            N  VLT GF   +K + R +   C   + S  E  +K + + GL+SD VIE L+S +DPI
Sbjct: 56   NTVVLT-GFSCYFKGNRRTHHVSCGIDLSSYNEAKIKRRIRKGLNSDGVIEVLRSYSDPI 114

Query: 584  EALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLII 763
            EAL+FF+S+A+QP I+HTTE+CNYML++LR + +V EM++VFDLMQKQIIKR+ ETY+ I
Sbjct: 115  EALAFFKSIAQQPKIIHTTETCNYMLDILRINGKVTEMSMVFDLMQKQIIKRSQETYVTI 174

Query: 764  FKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGI 943
            F GL ++GGI++AP+ALE +  AGFVLNAFSYNGLIHLLLQSGF+R+AMEVYRRMVSE I
Sbjct: 175  FNGLDIFGGIKRAPVALERLSHAGFVLNAFSYNGLIHLLLQSGFQREAMEVYRRMVSENI 234

Query: 944  KPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            KPSLKTYSALMVA GK +D  TVM LL EM+ LGLRPNVYT+
Sbjct: 235  KPSLKTYSALMVAFGKRKDINTVMYLLHEMEALGLRPNVYTY 276



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 38/128 (29%), Positives = 71/128 (55%)
 Frame = +2

Query: 686  VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 865
            +E     F  M K+ I+ +++TY I+   L + G +  A    E ++ +G   +   YN 
Sbjct: 954  LENACEFFKRMLKEGIQPDLKTYTILVDCLCMVGRVDDALQYFEALKISGHEPDLVFYNL 1013

Query: 866  LIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLG 1045
            +I+ L + G   +A+ +++ M S+G+ P L +Y+AL++  G++   E    + EE+Q  G
Sbjct: 1014 VINGLGKDGRLEEALSLFKEMQSKGLLPDLYSYNALILHLGRLGRVEEAGAMYEELQRKG 1073

Query: 1046 LRPNVYTF 1069
            L PNV+T+
Sbjct: 1074 LEPNVFTY 1081



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 43/144 (29%), Positives = 69/144 (47%)
 Frame = +2

Query: 626  IVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAP 805
            I+ +T + N +++ L      E    +F+ M+K     NM+TY ++   L   G I +A 
Sbjct: 794  ILPSTHAYNILIDGLLKASCFEMAWGLFEKMKKVSSTPNMQTYNLLLDALGKSGKIEEAR 853

Query: 806  LALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVAS 985
              LE M   G   N  +YN ++  L++S    QA+E Y  ++S    PS +TY  L+   
Sbjct: 854  KLLEEMHIKGIKGNTITYNIMLLGLVRSNKLDQAIEFYYELLSREFSPSPRTYGPLIDGL 913

Query: 986  GKIRDTETVMGLLEEMQNLGLRPN 1057
             K    +    L EEM+  G +PN
Sbjct: 914  SKAGRVDEAKELFEEMREYGCKPN 937


>ref|XP_007136936.1| hypothetical protein PHAVU_009G086500g [Phaseolus vulgaris]
            gi|561010023|gb|ESW08930.1| hypothetical protein
            PHAVU_009G086500g [Phaseolus vulgaris]
          Length = 1106

 Score =  269 bits (687), Expect = 2e-69
 Identities = 136/222 (61%), Positives = 171/222 (77%), Gaps = 1/222 (0%)
 Frame = +2

Query: 407  LKVLTYGFLENWKKHERKNVGFCRFVMKSSFERV-VKGKTKNGLSSDEVIETLKSITDPI 583
            +K L  G L NWKKH ++ +G    V + + E V V GK+K  +SS+EVI  LKSI DP 
Sbjct: 37   MKSLPNGSLVNWKKHGKRQLGIGVLVTRCAPEVVAVNGKSKTRVSSEEVIGVLKSILDPN 96

Query: 584  EALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLII 763
             AL +F+ V++ PN+VHT E+CNYMLELLR H RVE+M  VFD MQ+Q+I RN  TYL I
Sbjct: 97   SALLYFKMVSQLPNLVHTPETCNYMLELLRAHGRVEDMVFVFDFMQEQVINRNPNTYLTI 156

Query: 764  FKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGI 943
            FK L + GGIRQAP AL  MR+AGFVLNA+SYNGLIH LLQ GF ++A++VY+RM+SEG+
Sbjct: 157  FKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIHFLLQPGFCKEALKVYKRMISEGM 216

Query: 944  KPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            KPS+KTYSALMVA GK R+T T+M LLEEM+ LGL+PN+YT+
Sbjct: 217  KPSMKTYSALMVALGKRRETGTIMDLLEEMKTLGLKPNIYTY 258



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 41/165 (24%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
 Frame = +2

Query: 584  EALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQI---IKRNMETY 754
            EA++ F+ ++      H   +C     L+ G  +   + +  DL ++ +   I+ ++++Y
Sbjct: 904  EAMNIFEEMSDY----HCKPNCAIYNILINGFGKAGNVDIACDLFKRMVKEGIRPDLKSY 959

Query: 755  LIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVS 934
             I+ + L +   +  A    E ++  G   +  SYN +I+ L +S    +A+ ++  M +
Sbjct: 960  TILVECLCMSDRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSHRFEEALSLFSEMKN 1019

Query: 935  EGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
             GI P L TY++L++  G     +    + EE+Q +GL PNV+T+
Sbjct: 1020 RGITPDLYTYNSLILHFGNAGMVDRAGKMFEELQLMGLEPNVFTY 1064


>ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 1089

 Score =  262 bits (669), Expect = 2e-67
 Identities = 136/233 (58%), Positives = 175/233 (75%), Gaps = 3/233 (1%)
 Frame = +2

Query: 380  STRRIKSGNLKVLTYGFLENWKKHERKN-VGFCRFVMKSSFERVVKG--KTKNGLSSDEV 550
            +T RI    L  L    L+ W   +R   +G C FV+K   ++VV    K +N +SS+EV
Sbjct: 9    TTSRIFGPLLHPLPKSKLKVWPCPKRNTRLGLCAFVIKRPHQQVVVNTKKPRNSVSSEEV 68

Query: 551  IETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQI 730
            +  LKSI+DP  A SFF+S+A  P ++HTTE+CNYML+LL  HRRV +MA VFDLMQ+ I
Sbjct: 69   VRVLKSISDPTSAFSFFKSIADLPTVLHTTETCNYMLQLLGVHRRVGDMAFVFDLMQRHI 128

Query: 731  IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAM 910
            I R+++TYL IFKGL + GGIR AP AL  +R+ GFVLNAFSYNGLI++L+QSG+ R+A+
Sbjct: 129  INRSLDTYLTIFKGLNIRGGIRAAPYALPRLRKHGFVLNAFSYNGLIYMLIQSGYCREAL 188

Query: 911  EVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            +VY+ MVS+GI+PSLKTYSALMVA GK RD + VMGLL+EM+ LGLRPNVYTF
Sbjct: 189  QVYQTMVSQGIRPSLKTYSALMVALGKRRDVQAVMGLLKEMETLGLRPNVYTF 241



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 46/160 (28%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
 Frame = +2

Query: 497  FERVVKGKTKNGLSSDEVIETLKSITDPIE-ALSFFQSVARQPNIVHTTESCNYMLELLR 673
            F+R++K   +  L S  ++         ++ AL +F+ + RQ  +   + S N M+  L 
Sbjct: 927  FKRMIKEGIRPDLKSFTILVDCYCQAGRVDDALHYFEEL-RQSGLDPDSVSYNLMINGLG 985

Query: 674  GHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 853
              RR+EE  V++D M+K+ I  ++ TY  +   L + G + +A    + +   G   + F
Sbjct: 986  RSRRMEEALVLYDEMRKRRITPDIFTYNSLILNLGLVGMVEEAGRIYKELLLTGLEPDVF 1045

Query: 854  SYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSAL 973
            +YN LI L   SG    A  VY+ M+  G  P++ TY+ L
Sbjct: 1046 TYNALIRLYSTSGNTDDAYAVYKNMMVGGCSPNVGTYAQL 1085



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 46/163 (28%), Positives = 73/163 (44%)
 Frame = +2

Query: 581  IEALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLI 760
            IEA    ++    PNIV    +CN  L  L    R+ E   ++D +    +  +  TY +
Sbjct: 433  IEAYERMKTRGIVPNIV----ACNASLYGLAEEGRLHEAKHIYDELIYSGLSPDSVTYNM 488

Query: 761  IFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEG 940
            + K     G I +A   L  M R G   +    N LI +L ++G   +A +++ RM    
Sbjct: 489  MMKCYSRVGQIDEAIKLLSEMERNGCEADVIIVNSLIDMLYKAGRVDEAWQMFYRMKEMK 548

Query: 941  IKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            + P++ TY+ L+ A GK       + + E M   G  PN  TF
Sbjct: 549  LTPTVVTYNTLLAALGKEGQVGKAIAMFENMTEQGCPPNAITF 591


>ref|XP_004501390.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic-like [Cicer arietinum]
          Length = 1120

 Score =  245 bits (625), Expect = 3e-62
 Identities = 137/274 (50%), Positives = 179/274 (65%), Gaps = 13/274 (4%)
 Frame = +2

Query: 287  VMELCFSMI--CTTNVKCSVPIDCKPTVLSNYW----STRRIKSGNLKVLTYGFLENWKK 448
            V+ LC S    C+    C    D    V+SN+      T  +K   +K  + G L NWKK
Sbjct: 3    VLLLCSSTTTCCSGMSFCCALNDTNFCVVSNHGLFGGGTNFVK---MKTFSNGSLLNWKK 59

Query: 449  -------HERKNVGFCRFVMKSSFERVVKGKTKNGLSSDEVIETLKSITDPIEALSFFQS 607
                   H   + G      + +   VV GK K  +SS+EV+  LKSI +P    S+F+ 
Sbjct: 60   RGRRLVSHRNNDFGIRIRCARENEVVVVNGKNKTRVSSEEVMSVLKSILEPSSVFSYFKL 119

Query: 608  VARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWG 787
            V++ PN VH T++CNYMLE LR   R+E+M  VF+LMQKQ+I RN+ TY+ IFK L + G
Sbjct: 120  VSQLPNFVHNTDACNYMLEFLRDQGRIEDMVYVFNLMQKQVIYRNLNTYMTIFKALSIKG 179

Query: 788  GIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYS 967
            GI  AP AL  MR+AGFVLNA+SYNGLIHLLL  GF ++A++VY+RM+SEG+KPS+KTYS
Sbjct: 180  GIGNAPSALGKMRQAGFVLNAYSYNGLIHLLL-PGFYKEALKVYKRMISEGMKPSMKTYS 238

Query: 968  ALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            ALMVA G+ RDT  +M LLEEM+NLGLRPN+YT+
Sbjct: 239  ALMVALGRRRDTRNIMNLLEEMKNLGLRPNIYTY 272



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 38/138 (27%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
 Frame = +2

Query: 665  LLRGHRRVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAG 835
            L+ G  +  E+ +  DL +K +   I+ ++++Y I+ + L + G + +A    E ++  G
Sbjct: 941  LINGFGKAGEIDIALDLFKKMVKEGIRPDLKSYTILVECLCITGRVDEAFQYFEELKLTG 1000

Query: 836  FVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVM 1015
               +  SYN +I+ L +S    +A+ ++  M + GI P L TY++L+   G     +  +
Sbjct: 1001 LDPDTVSYNFIINGLGKSRRLEEALSLFSEMKNRGISPDLYTYNSLIFHLGVTGKVDLAV 1060

Query: 1016 GLLEEMQNLGLRPNVYTF 1069
             + EE+Q +GL P+V+T+
Sbjct: 1061 KMYEELQLVGLEPSVFTY 1078



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 45/186 (24%), Positives = 81/186 (43%)
 Frame = +2

Query: 512  KGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVE 691
            +G   N ++ + +I  L       +AL  +  +        T  +   +++ L   RR+E
Sbjct: 859  RGCEPNAITHNIIISALVKSNSLDKALDLYYELMSS-GFSPTPSTYGPLIDGLLKARRLE 917

Query: 692  EMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLI 871
            E   +F+ M     K N   Y I+  G    G I  A    + M + G   +  SY  L+
Sbjct: 918  EAMKIFEEMLDNQCKPNSVIYNILINGFGKAGEIDIALDLFKKMVKEGIRPDLKSYTILV 977

Query: 872  HLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLR 1051
              L  +G   +A + +  +   G+ P   +Y+ ++   GK R  E  + L  EM+N G+ 
Sbjct: 978  ECLCITGRVDEAFQYFEELKLTGLDPDTVSYNFIINGLGKSRRLEEALSLFSEMKNRGIS 1037

Query: 1052 PNVYTF 1069
            P++YT+
Sbjct: 1038 PDLYTY 1043


>ref|XP_006412544.1| hypothetical protein EUTSA_v10024264mg [Eutrema salsugineum]
            gi|557113714|gb|ESQ53997.1| hypothetical protein
            EUTSA_v10024264mg [Eutrema salsugineum]
          Length = 1118

 Score =  236 bits (603), Expect = 9e-60
 Identities = 129/235 (54%), Positives = 163/235 (69%), Gaps = 4/235 (1%)
 Frame = +2

Query: 377  WSTRRIKSGNLK--VLTYGFLENWKKHERKNVGFCRFVMKSSFERV--VKGKTKNGLSSD 544
            W   ++ +G  K   L  G + + KKH RK +      MK S   V  +   +K+  SS 
Sbjct: 32   WRRGKLVTGESKFHALKVGSVSHRKKHWRKTMRCSVVSMKGSDFSVSMINKTSKSNPSSG 91

Query: 545  EVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQK 724
            EV + L S+ D   A S+F+SVA   N+VHTTE+CNYMLE LR   ++EEMA VFDLMQK
Sbjct: 92   EVTKVLMSLPDTDSAFSYFKSVAANSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQK 151

Query: 725  QIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQ 904
            +IIKR++ T+L +FK L V GG+RQAP AL  MR +GF LNA+SYNGLIHLLL+S F  +
Sbjct: 152  RIIKRDINTFLTVFKCLSVKGGLRQAPYALRKMRESGFALNAYSYNGLIHLLLKSRFCTE 211

Query: 905  AMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            AMEVYRRM+ EG +PSL+TYS+LMV  GK RD E VM LL+EM+ LGL+PNVYTF
Sbjct: 212  AMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIEAVMALLKEMETLGLKPNVYTF 266



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 36/123 (29%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
 Frame = +2

Query: 704  VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 883
            +F  M K+ ++ +++TY ++   L + G + +       ++ +G   +   YN +I+ L 
Sbjct: 954  LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLDPDVVCYNLIINGLG 1013

Query: 884  QSGFRRQAMEVYRRMV-SEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNV 1060
            +S    +A+E+Y  M  S GI P L TY++L++  G     E    + +E+Q  GL PNV
Sbjct: 1014 KSQRLEEALELYNEMKNSRGITPDLYTYNSLILNMGIAGMVEGAGKIYDEIQRAGLEPNV 1073

Query: 1061 YTF 1069
            +TF
Sbjct: 1074 FTF 1076


>ref|XP_006282792.1| hypothetical protein CARUB_v10006400mg [Capsella rubella]
            gi|482551497|gb|EOA15690.1| hypothetical protein
            CARUB_v10006400mg [Capsella rubella]
          Length = 1114

 Score =  236 bits (602), Expect = 1e-59
 Identities = 140/263 (53%), Positives = 177/263 (67%), Gaps = 8/263 (3%)
 Frame = +2

Query: 305  SMICTTNVKCSVPIDCKPTVLSNY-----WSTRRIKSGNLKVLTYGFLENWKKHERKNVG 469
            +++C+T++   V +     +LSN      W    + +G LK      + + KKH RK   
Sbjct: 3    ALLCSTSLCGDVTVG-DACLLSNIKAKCCWRRDNLVTGGLKFHPLK-IGSRKKHWRKKSM 60

Query: 470  FCRFV-MKSS-FERVVKGKT-KNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTT 640
             C  V MKSS F   + GK+ K+ LSS EV   LKS  D     S+F+SVA   N+VH+T
Sbjct: 61   RCSVVSMKSSDFSASMIGKSLKSNLSSIEVTRVLKSFPDIDSKFSYFKSVADNSNLVHST 120

Query: 641  ESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALEN 820
            E+CNYMLE LR + +VEEM  VFD MQK+IIKR+  TYL IFK L V GG+RQ+P AL  
Sbjct: 121  ETCNYMLEALRVNGKVEEMVYVFDFMQKRIIKRDANTYLTIFKSLSVKGGLRQSPYALRK 180

Query: 821  MRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRD 1000
            MR  GFVLNA+SYNGLIHLLL+S F  +AMEVY RM+ EG +PSL+TYS+LMV  GK RD
Sbjct: 181  MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYSRMILEGFRPSLQTYSSLMVGLGKRRD 240

Query: 1001 TETVMGLLEEMQNLGLRPNVYTF 1069
             E+VMGLL+EM+ LGL+PNVYTF
Sbjct: 241  IESVMGLLKEMETLGLKPNVYTF 263


>ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
            lyrata] gi|297315145|gb|EFH45568.1| hypothetical protein
            ARALYDRAFT_491552 [Arabidopsis lyrata subsp. lyrata]
          Length = 1114

 Score =  236 bits (602), Expect = 1e-59
 Identities = 132/234 (56%), Positives = 162/234 (69%), Gaps = 3/234 (1%)
 Frame = +2

Query: 377  WSTRRIKSGNLKVLTYGFLENWKKHERKNVGFCRFV-MKSS--FERVVKGKTKNGLSSDE 547
            W    + +G LK      + + KKH R     C  V MKSS     +++  +K  LSS E
Sbjct: 31   WRRDNLVTGELKFHALK-IGSRKKHWRMKSMRCSLVSMKSSGFSGSMIRKSSKPDLSSSE 89

Query: 548  VIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQ 727
            V   L S  D   + S+F+SVA   N+VHTTE+CNYMLE LR   ++EEMA VFDLMQK+
Sbjct: 90   VARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKR 149

Query: 728  IIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQA 907
            IIKR+  TYL IFK L V GG+RQAP AL  MR  GFVLNA+SYNGLIHLLL+S F  +A
Sbjct: 150  IIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEA 209

Query: 908  MEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            MEVYRRM+ +G +PSL+TYS+LMV  GK RD E+VMGLL+EM+ LGL+PNVYTF
Sbjct: 210  MEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTF 263


>ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355492334|gb|AES73537.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  233 bits (594), Expect = 1e-58
 Identities = 132/275 (48%), Positives = 181/275 (65%), Gaps = 14/275 (5%)
 Frame = +2

Query: 287  VMELCFSMI--CTTNVK-CSVPIDCKPTVLSNYW--STRRIKSGNLKVLTYGFLENWKKH 451
            V+ LC S    C   +  C    D    VL+N+   +T  +K   +K L+ G L N KKH
Sbjct: 3    VLLLCSSTTTCCNNGMSFCYTLTDTNFYVLTNHGGPTTNFVK---IKTLSNGSLLNLKKH 59

Query: 452  ERKNVGFCRF--VMKSSFERVV-------KGKTKNGLSSDEVIETLKSITDPIEALSFFQ 604
                VG   F  + + + +  +       + K K  +S +EV+  LKSI+DP  A S+F+
Sbjct: 60   GTTRVGHRAFRTITRCNHDNDLVVVNNGKRKKNKTSVSEEEVMTILKSISDPNSAFSYFK 119

Query: 605  SVARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVW 784
             V++  N VHTT++CNYMLE+LR  RR+E+M  VFDLMQK++I RN+ TY+ IFK L + 
Sbjct: 120  IVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIK 179

Query: 785  GGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTY 964
            GGI +AP AL  M   GF+LNA+SYNGLIHLLL  GF  +A++VY+RM+SEG+KPS+KTY
Sbjct: 180  GGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL-PGFCNEALKVYKRMISEGMKPSMKTY 238

Query: 965  SALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            SALMVA G+  DT  +M LLEEM+++GLRPN+YT+
Sbjct: 239  SALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTY 273



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 37/122 (30%), Positives = 70/122 (57%)
 Frame = +2

Query: 704  VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 883
            +F  M K+ I+ ++++Y I+ + L + G I +A    E ++  G   +  SYN +I+ L 
Sbjct: 958  LFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLG 1017

Query: 884  QSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVY 1063
            +S    +A+ ++  M + GI P L TY+AL++  G     +  + + EE+Q +GL P+V+
Sbjct: 1018 KSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVF 1077

Query: 1064 TF 1069
            T+
Sbjct: 1078 TY 1079


>ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
            gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g31850, chloroplastic; AltName: Full=Protein PROTON
            GRADIENT REGULATION 3; Flags: Precursor
            gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis
            thaliana] gi|7270088|emb|CAB79903.1| putative protein
            [Arabidopsis thaliana] gi|332660567|gb|AEE85967.1| proton
            gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  232 bits (591), Expect = 2e-58
 Identities = 128/213 (60%), Positives = 157/213 (73%), Gaps = 4/213 (1%)
 Frame = +2

Query: 443  KKHERKNVGFCRFV-MKSS--FERVVKGKTKNGLSS-DEVIETLKSITDPIEALSFFQSV 610
            KKH R+    C  V MKSS     +++  +K  LSS +EV   LKS  D   + S+F+SV
Sbjct: 49   KKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSV 108

Query: 611  ARQPNIVHTTESCNYMLELLRGHRRVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGG 790
            A   N+VHTTE+CNYMLE LR   ++EEMA VFDLMQK+IIKR+  TYL IFK L V GG
Sbjct: 109  AGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGG 168

Query: 791  IRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSA 970
            ++QAP AL  MR  GFVLNA+SYNGLIHLLL+S F  +AMEVYRRM+ EG +PSL+TYS+
Sbjct: 169  LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSS 228

Query: 971  LMVASGKIRDTETVMGLLEEMQNLGLRPNVYTF 1069
            LMV  GK RD ++VMGLL+EM+ LGL+PNVYTF
Sbjct: 229  LMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF 261