BLASTX nr result

ID: Akebia24_contig00015543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00015543
         (415 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g...   101   1e-19
ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g...    89   8e-16
ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g...    89   8e-16
ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g...    89   8e-16
ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g...    89   8e-16
dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   3e-15
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...    86   4e-15
gb|ACG35732.1| nucleic acid binding protein [Zea mays]                 86   5e-15
ref|NP_001141163.1| uncharacterized protein LOC100273249 [Zea ma...    86   7e-15
ref|XP_004953739.1| PREDICTED: KH domain-containing protein At5g...    84   2e-14
ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [A...    84   3e-14
ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [S...    84   3e-14
gb|AFW63660.1| hypothetical protein ZEAMMB73_233372 [Zea mays]         83   3e-14
gb|ACN35020.1| unknown [Zea mays] gi|413923729|gb|AFW63661.1| hy...    83   3e-14
gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indi...    82   6e-14
gb|EMT02598.1| hypothetical protein F775_43967 [Aegilops tauschii]     82   8e-14
gb|AFW63662.1| hypothetical protein ZEAMMB73_233372, partial [Ze...    82   8e-14
ref|XP_006647814.1| PREDICTED: KH domain-containing protein At5g...    80   2e-13
ref|XP_007020328.1| RNA-binding KH domain-containing protein [Th...    80   4e-13
ref|XP_002299073.2| KH domain-containing family protein [Populus...    79   9e-13

>ref|XP_002274648.1| PREDICTED: KH domain-containing protein At5g56140 isoform 1 [Vitis
           vinifera] gi|296089986|emb|CBI39805.3| unnamed protein
           product [Vitis vinifera]
          Length = 287

 Score =  101 bits (251), Expect = 1e-19
 Identities = 54/73 (73%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY          PHI+G RS+T+ALVEQEKYLSELLAER KLSPF+PVLPHSY
Sbjct: 1   MSSGRYMAYSPSPSTAPHSPHIAGLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSY 60

Query: 36  RLLNQEVL-VTAL 1
           RLLNQE+L VT L
Sbjct: 61  RLLNQEILRVTTL 73


>ref|XP_006346087.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X2
           [Solanum tuberosum]
          Length = 289

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY           HI+G RS+++A+ EQEKYLSELLAER KL PF+PVLPH Y
Sbjct: 1   MSSGRYMAYSPSPSAPQSP-HIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59

Query: 36  RLLNQEVL-VTAL 1
           RLLNQE+L VT L
Sbjct: 60  RLLNQELLRVTTL 72


>ref|XP_006346086.1| PREDICTED: KH domain-containing protein At5g56140-like isoform X1
           [Solanum tuberosum]
          Length = 293

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY           HI+G RS+++A+ EQEKYLSELLAER KL PF+PVLPH Y
Sbjct: 1   MSSGRYMAYSPSPSAPQSP-HIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59

Query: 36  RLLNQEVL-VTAL 1
           RLLNQE+L VT L
Sbjct: 60  RLLNQELLRVTTL 72


>ref|XP_004244007.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 2
           [Solanum lycopersicum]
          Length = 295

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY           HI+G RS+++A+ EQEKYLSELLAER KL PF+PVLPH Y
Sbjct: 1   MSSGRYMAYSPSPSAPQSP-HIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59

Query: 36  RLLNQEVL-VTAL 1
           RLLNQE+L VT L
Sbjct: 60  RLLNQELLRVTTL 72


>ref|XP_004244006.1| PREDICTED: KH domain-containing protein At5g56140-like isoform 1
           [Solanum lycopersicum]
          Length = 299

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 48/73 (65%), Positives = 55/73 (75%), Gaps = 1/73 (1%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY           HI+G RS+++A+ EQEKYLSELLAER KL PF+PVLPH Y
Sbjct: 1   MSSGRYMAYSPSPSAPQSP-HIAGLRSASSAIAEQEKYLSELLAERHKLGPFVPVLPHCY 59

Query: 36  RLLNQEVL-VTAL 1
           RLLNQE+L VT L
Sbjct: 60  RLLNQELLRVTTL 72


>dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 287

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/68 (64%), Positives = 52/68 (76%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY          P ISG R+S+ A+ +QEKYL+ELLAER KL+PF+PVLPHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRISGLRASSAAVADQEKYLAELLAERHKLNPFVPVLPHSI 60

Query: 36  RLLNQEVL 13
           RLLNQE+L
Sbjct: 61  RLLNQEIL 68


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = -2

Query: 207 GRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSYRLL 28
           GR+MAY           H+SG RS+++ALVEQEKYLSELLAER KLSPF+PVLPH+YRLL
Sbjct: 15  GRFMAYSPSPSAPHSP-HLSGLRSASSALVEQEKYLSELLAERHKLSPFMPVLPHTYRLL 73

Query: 27  NQEVL-VTAL 1
           +QE+L VT L
Sbjct: 74  SQEILRVTTL 83


>gb|ACG35732.1| nucleic acid binding protein [Zea mays]
          Length = 286

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 43/68 (63%), Positives = 51/68 (75%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY          P I+G R+ + A+ EQEKYL+ELLAERQKL PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIAGLRAPSAAMAEQEKYLAELLAERQKLGPFVPVIPHSV 60

Query: 36  RLLNQEVL 13
           RLLNQE+L
Sbjct: 61  RLLNQEIL 68


>ref|NP_001141163.1| uncharacterized protein LOC100273249 [Zea mays]
           gi|194703026|gb|ACF85597.1| unknown [Zea mays]
           gi|413938647|gb|AFW73198.1| nucleic acid binding protein
           [Zea mays]
          Length = 286

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/68 (63%), Positives = 51/68 (75%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY          P I+G R+ + A+ EQEKYL+ELLAERQKL PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIAGLRAPSAAVAEQEKYLAELLAERQKLGPFVPVIPHSV 60

Query: 36  RLLNQEVL 13
           RLLNQE+L
Sbjct: 61  RLLNQEIL 68


>ref|XP_004953739.1| PREDICTED: KH domain-containing protein At5g56140-like [Setaria
           italica]
          Length = 286

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 42/68 (61%), Positives = 50/68 (73%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY          P I+G R+ + A+ EQEKYL+ELLAER KL PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIAGLRAPSAAVAEQEKYLAELLAERHKLGPFIPVIPHSV 60

Query: 36  RLLNQEVL 13
           RLLNQE+L
Sbjct: 61  RLLNQEIL 68


>ref|XP_006857601.1| hypothetical protein AMTR_s00061p00100880 [Amborella trichopoda]
           gi|548861697|gb|ERN19068.1| hypothetical protein
           AMTR_s00061p00100880 [Amborella trichopoda]
          Length = 286

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/73 (64%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY             S FRS+  ALVEQ+KYLSELLAERQKL PF+ VLPHSY
Sbjct: 1   MSSGRYMAYSPSPSTAPH----SPFRSAATALVEQDKYLSELLAERQKLGPFMQVLPHSY 56

Query: 36  RLLNQEVL-VTAL 1
           R+LNQE++ VT L
Sbjct: 57  RVLNQEIVRVTTL 69


>ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520 [Sorghum bicolor]
           gi|241934199|gb|EES07344.1| hypothetical protein
           SORBIDRAFT_04g029520 [Sorghum bicolor]
          Length = 286

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 42/68 (61%), Positives = 49/68 (72%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY          P I G R+ + A+ EQEKYL+ELLAER KL PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIGGLRTPSAAVAEQEKYLAELLAERHKLGPFIPVIPHSV 60

Query: 36  RLLNQEVL 13
           RLLNQE+L
Sbjct: 61  RLLNQEIL 68


>gb|AFW63660.1| hypothetical protein ZEAMMB73_233372 [Zea mays]
          Length = 197

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY          P I G R+ + A+ EQEKYLSELLAER KL+PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVIPHSV 60

Query: 36  RLLNQEV 16
           RLLNQE+
Sbjct: 61  RLLNQEI 67


>gb|ACN35020.1| unknown [Zea mays] gi|413923729|gb|AFW63661.1| hypothetical protein
           ZEAMMB73_233372 [Zea mays]
          Length = 286

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY          P I G R+ + A+ EQEKYLSELLAER KL+PF+PV+PHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRIHGLRTPSAAVAEQEKYLSELLAERHKLTPFIPVIPHSV 60

Query: 36  RLLNQEV 16
           RLLNQE+
Sbjct: 61  RLLNQEI 67


>gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indica Group]
           gi|215769394|dbj|BAH01623.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 286

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 41/68 (60%), Positives = 52/68 (76%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           M+SGRYMAY          P I G R++++A+ +QEKYL+ELLAER KLSPF+PVLP+S 
Sbjct: 1   MASGRYMAYSPSPSTTPHSPRIPGLRAASSAVADQEKYLAELLAERHKLSPFIPVLPNSV 60

Query: 36  RLLNQEVL 13
           RLLNQE+L
Sbjct: 61  RLLNQEIL 68


>gb|EMT02598.1| hypothetical protein F775_43967 [Aegilops tauschii]
          Length = 197

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 42/65 (64%), Positives = 49/65 (75%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           MSSGRYMAY          P ISG R+S+ A+ +QEKYL+ELLAER KL+PF+PVLPHS 
Sbjct: 1   MSSGRYMAYSPSPSTTPHSPRISGLRASSAAVADQEKYLAELLAERHKLNPFVPVLPHSI 60

Query: 36  RLLNQ 22
           RLLNQ
Sbjct: 61  RLLNQ 65


>gb|AFW63662.1| hypothetical protein ZEAMMB73_233372, partial [Zea mays]
          Length = 179

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 45/81 (55%), Positives = 53/81 (65%)
 Frame = -2

Query: 264 ISPESGRDLTMLSLENMSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLA 85
           ISP  G      +  +MSSGRYMAY          P I G R+ + A+ EQEKYLSELLA
Sbjct: 91  ISPREGEQQ---AAADMSSGRYMAYSPSPSTTPHSPRIHGLRTPSAAVAEQEKYLSELLA 147

Query: 84  ERQKLSPFLPVLPHSYRLLNQ 22
           ER KL+PF+PV+PHS RLLNQ
Sbjct: 148 ERHKLTPFIPVIPHSVRLLNQ 168


>ref|XP_006647814.1| PREDICTED: KH domain-containing protein At5g56140-like [Oryza
           brachyantha]
          Length = 285

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/68 (63%), Positives = 52/68 (76%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNALVEQEKYLSELLAERQKLSPFLPVLPHSY 37
           M+SGRYMAY          P ISG R+S+ A+ +QEKYLS+LLAER KLSPF+PVLP+S 
Sbjct: 1   MASGRYMAYSPSPSTTPHSPRISGLRASS-AVADQEKYLSDLLAERHKLSPFIPVLPNSV 59

Query: 36  RLLNQEVL 13
           RLLNQE+L
Sbjct: 60  RLLNQEIL 67


>ref|XP_007020328.1| RNA-binding KH domain-containing protein [Theobroma cacao]
           gi|508719956|gb|EOY11853.1| RNA-binding KH
           domain-containing protein [Theobroma cacao]
          Length = 312

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 46/75 (61%), Positives = 53/75 (70%), Gaps = 6/75 (8%)
 Frame = -2

Query: 207 GRYMAYXXXXXXXXXXPHISGFRS-----STNALVEQEKYLSELLAERQKLSPFLPVLPH 43
           GRYMAY           H+SG RS     S+ A ++QEKYLSELLAER KLSPF+PVLPH
Sbjct: 9   GRYMAYSPSPSAPHSP-HLSGLRSAAAAASSAAFLDQEKYLSELLAERHKLSPFMPVLPH 67

Query: 42  SYRLLNQEVL-VTAL 1
           +YRLLNQE+L VT L
Sbjct: 68  TYRLLNQEILRVTTL 82


>ref|XP_002299073.2| KH domain-containing family protein [Populus trichocarpa]
           gi|550350090|gb|EEE83878.2| KH domain-containing family
           protein [Populus trichocarpa]
          Length = 302

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
 Frame = -2

Query: 216 MSSGRYMAYXXXXXXXXXXPHISGFRSSTNA---LVEQEKYLSELLAERQKLSPFLPVLP 46
           + +GR+MAY           HISG RSS  +   +VEQEKYLSELLAER K+SPFLPVLP
Sbjct: 11  VGAGRFMAYSPSPSAPHSP-HISGLRSSAASSALVVEQEKYLSELLAERHKISPFLPVLP 69

Query: 45  HSYRLLNQEVL 13
           ++YRLLNQE+L
Sbjct: 70  NTYRLLNQEIL 80


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