BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00015440
         (915 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]   321   2e-85
ref|XP_007208480.1| hypothetical protein PRUPE_ppa018503mg [Prun...   296   1e-77
gb|EXB51073.1| hypothetical protein L484_023776 [Morus notabilis]     285   1e-74
ref|XP_002299078.1| hypothetical protein POPTR_0001s47560g [Popu...   273   7e-71
ref|XP_002531775.1| pentatricopeptide repeat-containing protein,...   270   4e-70
ref|XP_006346080.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-59
ref|XP_004244333.1| PREDICTED: pentatricopeptide repeat-containi...   229   9e-58
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   187   4e-45
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha...   183   7e-44
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps...   181   4e-43
ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutr...   181   5e-43
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ...   180   6e-43
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ...   176   1e-41
gb|AEP33764.1| organelle transcript processing 82, partial [Iber...   176   1e-41
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr...   175   2e-41
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam...   175   3e-41
ref|XP_007046897.1| Tetratricopeptide repeat (TPR)-like superfam...   174   3e-41
ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containi...   174   4e-41
ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citr...   174   4e-41
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   174   6e-41

>emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
          Length = 531

 Score =  321 bits (823), Expect = 2e-85
 Identities = 165/262 (62%), Positives = 197/262 (75%), Gaps = 9/262 (3%)
 Frame = -2

Query: 761 SPTASPRAT------TPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIE 600
           SP++SP  +      TPAR+P T+ L   C   QEVRQ+HAQ +VSGLLAR P AG+L++
Sbjct: 6   SPSSSPLNSQLLLKRTPARMPATVILLQMCHNFQEVRQIHAQFIVSGLLARPPNAGRLLD 65

Query: 599 SYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYT 420
           SY+SMS IY A  VFN + SPDVFA N MIRGLT+GN PYD+LLLYN +L   L PDNYT
Sbjct: 66  SYVSMSQIYYALLVFNRIPSPDVFAYNAMIRGLTLGNCPYDSLLLYNKLLLGGLTPDNYT 125

Query: 419 YTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFP 240
           YTFVLK CS L A+FEGKQVHCQ+IKAGV+PDT++H+SLIHMYA SD L  A+ VL    
Sbjct: 126 YTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHTSLIHMYAKSDCLACAEGVLAECS 185

Query: 239 EENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFRE 60
           +EN L  NSMISGY+  G +EKAR +FD M  KD A+WS M++GYTKNGM+ EAL  FRE
Sbjct: 186 QENVLAINSMISGYMSQGHVEKARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFRE 245

Query: 59  MMV---SGVPPNESTLVSALSA 3
           MM+   SGV PNES LVS+LSA
Sbjct: 246 MMMVSNSGVQPNESALVSSLSA 267



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 3/205 (1%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLA---SRL 438
           +I  Y+S  H+  A ++F+ M + D    + MI G T      +AL+++  M+    S +
Sbjct: 195 MISGYMSQGHVEKARAMFDKMGAKDAATWSGMITGYTKNGMHEEALVMFREMMMVSNSGV 254

Query: 437 IPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQR 258
            P+       L A +CL AL +G+ +H  I + G      + + L+ MYA    +  + +
Sbjct: 255 QPNESALVSSLSATACLGALDQGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYK 314

Query: 257 VLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEA 78
           +     + + +    M+SG+  HG   K  +LFD                          
Sbjct: 315 LFREMQQRDVVTWGVMMSGFAMHGQARKCFQLFD-------------------------- 348

Query: 77  LGFFREMMVSGVPPNESTLVSALSA 3
                EM+  G  PNE   V+ LSA
Sbjct: 349 -----EMVAGGTRPNEVIFVAILSA 368


>ref|XP_007208480.1| hypothetical protein PRUPE_ppa018503mg [Prunus persica]
           gi|462404122|gb|EMJ09679.1| hypothetical protein
           PRUPE_ppa018503mg [Prunus persica]
          Length = 509

 Score =  296 bits (757), Expect = 1e-77
 Identities = 151/242 (62%), Positives = 189/242 (78%), Gaps = 2/242 (0%)
 Frame = -2

Query: 722 IPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNTMK 543
           +P T+     C    EVRQ+HAQLVVSGLL R P AG+L++SY+++S IY ASSVF+ + 
Sbjct: 1   MPTTLVFLRMCSNFLEVRQVHAQLVVSGLLDRPPNAGRLLQSYVTVSQIYHASSVFDRIS 60

Query: 542 SPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQ 363
            PDVFA N MIRGL +G  P ++LLLYN ++   L PD+YTY FVLKACS LSA+FEG+Q
Sbjct: 61  CPDVFAYNNMIRGLILGKCPNNSLLLYNKLVLDGLKPDSYTYAFVLKACSQLSAIFEGRQ 120

Query: 362 VHCQIIKAGVSPDTYVHSSLIHMYANS-DGLDMAQRVLTLFPEENTLVKNSMISGYLRHG 186
           VHC+I+KAG + DT+VHSSLIHMY++S D L  A++VL  FPEENT+ KNS+ISGYL  G
Sbjct: 121 VHCRIVKAGTAMDTHVHSSLIHMYSSSTDSLVCAEQVLAGFPEENTIAKNSLISGYLSQG 180

Query: 185 WIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMM-VSGVPPNESTLVSAL 9
            +EKARE+FD M  KD ASWSAM++GYTKNGM  EALG F++MM +S V PNE+TLVS+L
Sbjct: 181 EVEKAREMFDNMVQKDDASWSAMIAGYTKNGMSAEALGLFQKMMTISEVSPNEATLVSSL 240

Query: 8   SA 3
           SA
Sbjct: 241 SA 242



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLA-SRLIP 432
           LI  YLS   +  A  +F+ M   D  + + MI G T      +AL L+  M+  S + P
Sbjct: 172 LISGYLSQGEVEKAREMFDNMVQKDDASWSAMIAGYTKNGMSAEALGLFQKMMTISEVSP 231

Query: 431 DNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVL 252
           +  T    L AC+ L AL +GK +H    K G      + ++LI MYA    ++    V 
Sbjct: 232 NEATLVSSLSACAHLGALDQGKWIHAYADKIGAKISVTLGTALIDMYAKCGSIEHGYEVF 291

Query: 251 TLFPEENTLVKNSMISGYLRHGWIEKARELFDGM 150
              P+++ +    +ISG+  HG  EK  ELFD M
Sbjct: 292 KKMPQKDLVAWGVIISGFAIHGQAEKCFELFDDM 325


>gb|EXB51073.1| hypothetical protein L484_023776 [Morus notabilis]
          Length = 523

 Score =  285 bits (730), Expect = 1e-74
 Identities = 140/239 (58%), Positives = 180/239 (75%)
 Frame = -2

Query: 719 PGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNTMKS 540
           P T+ L   C    EVRQ+HAQLVVSGL+ R P  G+L+ESY+ +S    A ++FNT+ S
Sbjct: 10  PATVILLQMCHNFHEVRQVHAQLVVSGLVNRPPNGGRLVESYVRVSQTQYALAIFNTIHS 69

Query: 539 PDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQV 360
           PDVFA NT++RGL +G  PY++LL+Y  +L + LIPDN+TYTFVLKACS + AL EGKQV
Sbjct: 70  PDVFAYNTIMRGLMLGKDPYNSLLMYEKLLMNGLIPDNFTYTFVLKACSHMKALIEGKQV 129

Query: 359 HCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWI 180
           HC++IKAG++PDT+VHSSLI+MYA+S  +  A+RVL  F EENTL  N+MISGYL  G +
Sbjct: 130 HCRMIKAGIAPDTHVHSSLINMYASSGSIACAERVLGEFKEENTLAMNAMISGYLSKGHV 189

Query: 179 EKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
           +KAR +F+ M  KD ASWSA+++GY  N MY EAL  F+EM+   V PNES LVS+LSA
Sbjct: 190 DKARAMFEKMAAKDVASWSAVIAGYRDNAMYKEALSIFQEMVAFRVSPNESALVSSLSA 248



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 7/199 (3%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           +I  YLS  H+  A ++F  M + DV + + +I G        +AL ++  M+A R+ P+
Sbjct: 179 MISGYLSKGHVDKARAMFEKMAAKDVASWSAVIAGYRDNAMYKEALSIFQEMVAFRVSPN 238

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
                  L AC  L AL +G  +H  I K  V     + ++L+ MYA    ++   +V  
Sbjct: 239 ESALVSSLSACGHLGALDQGMWIHAYIDKNKVKLSITLGTALVDMYAKCGCIESCYKVFR 298

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELF-----DGMRDKDGASWSAMVSGYTKNGMYV 84
             P  + +   ++ISG+  HG  EK  ELF     +G+R  +   + A++S  ++ G YV
Sbjct: 299 KLPNRDVVTWGAVISGFANHGKPEKCFELFGEMVSEGVRPNE-VIFVAILSACSRAG-YV 356

Query: 83  EALGFFREMMVS--GVPPN 33
           E    +   MV+  G+ P+
Sbjct: 357 ELGSQYFHQMVNDFGIVPS 375


>ref|XP_002299078.1| hypothetical protein POPTR_0001s47560g [Populus trichocarpa]
           gi|222846336|gb|EEE83883.1| hypothetical protein
           POPTR_0001s47560g [Populus trichocarpa]
          Length = 488

 Score =  273 bits (698), Expect = 7e-71
 Identities = 145/246 (58%), Positives = 172/246 (69%), Gaps = 1/246 (0%)
 Frame = -2

Query: 737 TTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPT-AGKLIESYLSMSHIYSASS 561
           TT  R P TI     C   QEV+QLHAQ VVSGLL   P  A +L+E+Y++MS IY A S
Sbjct: 8   TTSTRAPATIISLRTCHDFQEVKQLHAQFVVSGLLGYHPLCARRLLEAYVTMSQIYYAFS 67

Query: 560 VFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSA 381
           +F  + SPDVF  NTMIRGLTM                     DN+TYTFVLKACS L A
Sbjct: 68  IFERIPSPDVFVYNTMIRGLTM---------------------DNFTYTFVLKACSHLKA 106

Query: 380 LFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISG 201
            FEGKQVHCQIIKAG+ PDT++HSSLIHMY NS  +D A+RVL  F EENTL KN+MISG
Sbjct: 107 PFEGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGSIDDAERVLGEFSEENTLAKNAMISG 166

Query: 200 YLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTL 21
           YL  G ++KAR++FD M  KD ASWSA+++GYTKNGM+ EAL  F++MMVS + PNE+ L
Sbjct: 167 YLTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPNEAAL 226

Query: 20  VSALSA 3
           VS LSA
Sbjct: 227 VSLLSA 232



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 5/189 (2%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           +I  YL+   +  A  +F+ M + D  + + +I G T      +AL L+ +M+ S ++P+
Sbjct: 163 MISGYLTEGRVDKARKMFDDMAAKDAASWSALITGYTKNGMHTEALALFQDMMVSHILPN 222

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
                 +L AC  L  L +G+ +H  I K  V   T + ++LI MYA S  ++    +  
Sbjct: 223 EAALVSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGLFQ 282

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDG-----ASWSAMVSGYTKNGMYV 84
                + +    MIS +  HG   K  +LFD M   DG       + A++S  +  G   
Sbjct: 283 KMARRDVVTWGVMISAFAIHGHASKCFQLFDEML-ADGIRPNKVIFVAILSACSHAGCVE 341

Query: 83  EALGFFREM 57
           E   +F +M
Sbjct: 342 EGRQYFSQM 350


>ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528611|gb|EEF30631.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  270 bits (691), Expect = 4e-70
 Identities = 142/228 (62%), Positives = 170/228 (74%), Gaps = 1/228 (0%)
 Frame = -2

Query: 683 LQEVRQLHAQLVVSGLLARLPTAGK-LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIR 507
           + EVRQLHAQ VVSGLL      G+ L+ESY++MS I  A S+F  +   DVF  NTMIR
Sbjct: 1   MHEVRQLHAQFVVSGLLNHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIR 60

Query: 506 GLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSP 327
           GL +G +PYD+LLL+N +L   L PDNYTYTFVLKACS   AL EGKQVHCQIIKAG+SP
Sbjct: 61  GLMLGKRPYDSLLLFNELLLGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISP 120

Query: 326 DTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMR 147
           +T++HSSLIHMY +S  +  A+ VL  F EENTL KNSMISGYL  G ++KAR +FD M+
Sbjct: 121 NTHIHSSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMK 180

Query: 146 DKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
            KD ASWSA+++G TKNGM+ EAL  F +MMVS   PNES LVS LSA
Sbjct: 181 AKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSA 228



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 56/197 (28%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           +I  YLS  H+  A ++F+ MK+ DV + + +I G T      +AL L+ +M+ S  +P+
Sbjct: 159 MISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALALFEDMMVSHTLPN 218

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
                 +L AC+ L AL +G+ +H  I + G      + ++LI MYA    +    +   
Sbjct: 219 ESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLSTALIDMYAKCGDIQSGYKFFR 278

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRD----KDGASWSAMVSGYTKNGMYVE 81
             P  + +   ++ISG+  +G  +K  ELF+ M       +G  + A++S  +  G   E
Sbjct: 279 KMPRRDIVTWGAIISGFAIYGQAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEE 338

Query: 80  ALGFFREMMVS-GVPPN 33
              +F +MMV  G+ P+
Sbjct: 339 GKLYFNQMMVDLGIRPS 355


>ref|XP_006346080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum tuberosum]
          Length = 527

 Score =  236 bits (601), Expect = 1e-59
 Identities = 121/244 (49%), Positives = 169/244 (69%), Gaps = 3/244 (1%)
 Frame = -2

Query: 725 RIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNT- 549
           +IP ++ L   C+  +EV QLH QL+++GL+ R P   KL+ESY+ +S    A  VFN+ 
Sbjct: 25  KIPSSVLLLQMCREKKEVEQLHGQLILNGLIHRFPNGAKLVESYVGVSETDDALLVFNSS 84

Query: 548 MKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEG 369
           ++SPD FA N MIRGL +  +P ++L LY  ++   L PD++TYTFVLKACS L A+ EG
Sbjct: 85  IQSPDTFAYNVMIRGLILSKRPIESLFLYERLVTDGLSPDSHTYTFVLKACSHLKAVLEG 144

Query: 368 KQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLV--KNSMISGYL 195
           K VH QIIK G+ P+T++ SSLI MY+ +  +  A++VL  F E N ++   NSMI+GY+
Sbjct: 145 KTVHAQIIKKGIEPNTHICSSLISMYSCAGDMASAKQVLDEFSEHNNVICPFNSMITGYM 204

Query: 194 RHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVS 15
             G +E+A E+FD M +KD A+WSAM+SGY KNGM+ +AL  F++MM   VP NES+LV 
Sbjct: 205 NEGLVEEAIEIFDTMGNKDTATWSAMLSGYVKNGMHEDALATFQKMMSYNVPLNESSLVC 264

Query: 14  ALSA 3
            LSA
Sbjct: 265 TLSA 268



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 1/203 (0%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           +I  Y++   +  A  +F+TM + D    + M+ G        DAL  +  M++  +  +
Sbjct: 199 MITGYMNEGLVEEAIEIFDTMGNKDTATWSAMLSGYVKNGMHEDALATFQKMMSYNVPLN 258

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQII-KAGVSPDTYVHSSLIHMYANSDGLDMAQRVL 252
             +    L AC  L AL +G+ +H  II K  +     + ++L+ MYA            
Sbjct: 259 ESSLVCTLSACGELGALDQGRWIHKYIINKREIVISVNLGTALVDMYA------------ 306

Query: 251 TLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALG 72
                              + G +E + +LF+ M  +D  +W  ++S +  +G       
Sbjct: 307 -------------------KCGCVEFSYQLFEKMPRRDVVTWGVIISSFATHGQAKLCFQ 347

Query: 71  FFREMMVSGVPPNESTLVSALSA 3
            F EM+ SGV PN    V+ LSA
Sbjct: 348 LFDEMIESGVEPNGVVFVAILSA 370


>ref|XP_004244333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Solanum lycopersicum]
          Length = 527

 Score =  229 bits (585), Expect = 9e-58
 Identities = 116/243 (47%), Positives = 168/243 (69%), Gaps = 3/243 (1%)
 Frame = -2

Query: 722 IPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNT-M 546
           IP ++ L   C+  +EV+QLH QL+++GL+ R P   KL+ESY+ +S    A  VFN+ +
Sbjct: 26  IPSSVLLLQMCREKKEVKQLHGQLILNGLIHRFPNGAKLVESYVGVSETDDALLVFNSSI 85

Query: 545 KSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGK 366
           +SPD FA N MIRGL +  +P ++L LY  ++   L PD++TYTFVLKACS + A+ EGK
Sbjct: 86  QSPDTFAYNVMIRGLILSKRPIESLFLYERLVTDGLSPDSHTYTFVLKACSHMKAVLEGK 145

Query: 365 QVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLV--KNSMISGYLR 192
            VH QI+K G+ P+T++ SSLI MY+ +  +  A++VL  F E N ++   NSMI+GY+ 
Sbjct: 146 TVHAQIMKKGIKPNTHICSSLISMYSCAGDMASARQVLDEFSEPNNVICPFNSMITGYMN 205

Query: 191 HGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVSA 12
            G +E+A E+FD M +KD A+WS M+SGY KNGM+ +AL  F++MM   VP NE++LV  
Sbjct: 206 EGLVEEAIEIFDTMGNKDTATWSVMLSGYVKNGMHEDALATFQKMMSYNVPLNEASLVCT 265

Query: 11  LSA 3
           LS+
Sbjct: 266 LSS 268



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 42/190 (22%), Positives = 87/190 (45%), Gaps = 5/190 (2%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           +I  Y++   +  A  +F+TM + D    + M+ G        DAL  +  M++  +  +
Sbjct: 199 MITGYMNEGLVEEAIEIFDTMGNKDTATWSVMLSGYVKNGMHEDALATFQKMMSYNVPLN 258

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQII-KAGVSPDTYVHSSLIHMYANSDGLDMAQRVL 252
             +    L +C  L AL +G+ +H  II K        + ++L+ MYA    ++ + ++ 
Sbjct: 259 EASLVCTLSSCGELGALDQGRWLHKYIINKRETVMSVNLGTALVDMYAKCGCIEFSYQLF 318

Query: 251 TLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDK----DGASWSAMVSGYTKNGMYV 84
              P  + +    ++S +  HG  +   +LFD M +     +G  + A++S  +  G+  
Sbjct: 319 EKMPRRDVVTWGVILSSFATHGQAKLCFQLFDKMIESGVEPNGVVFVAILSACSHAGLVE 378

Query: 83  EALGFFREMM 54
           E   +F +M+
Sbjct: 379 EGCHYFDQMV 388


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  187 bits (476), Expect = 4e-45
 Identities = 108/268 (40%), Positives = 168/268 (62%), Gaps = 3/268 (1%)
 Frame = -2

Query: 797 SSPFLFLHPN-KLSPTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLP 621
           SSP L L P+  + P++ P        P    L+ KCQ+++  +Q+HA ++ +GL   L 
Sbjct: 4   SSPSLLLSPSFHVLPSSDPPYRVLQEHPSLKLLS-KCQSIRTFKQIHAHIIKTGLHNTLF 62

Query: 620 TAGKLIE-SYLSMS-HIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLA 447
              KLIE S +S S  I  A S+FN+++ P++F  N+MIRGL+M   P  AL+ +  M+ 
Sbjct: 63  ALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIY 122

Query: 446 SRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDM 267
           S + P++YT+ F+LK+C+ L++  EGKQ+H  ++K G   D ++H+SLI+MYA S  ++ 
Sbjct: 123 SGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNN 182

Query: 266 AQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMY 87
           AQ V       + +   ++I+GY   G++++AR+LFD M  KD  SW+AM++GY + G  
Sbjct: 183 AQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRS 242

Query: 86  VEALGFFREMMVSGVPPNESTLVSALSA 3
            EAL  F +M  + VPPNEST+VS LSA
Sbjct: 243 KEALLLFEDMRKANVPPNESTIVSVLSA 270



 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 69/213 (32%), Positives = 97/213 (45%)
 Frame = -2

Query: 641 GLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLY 462
           GL + L     LI+ Y     + +A  +F+ M   DV + N MI G T      +AL L+
Sbjct: 291 GLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALF 350

Query: 461 NNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANS 282
             MLAS + P   T+  +L +C+ L A+  GK +H  I K   S  T + +SLI +YA  
Sbjct: 351 REMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKC 410

Query: 281 DGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYT 102
                                          G I  AR++FDGM+ K  ASW+AM+ G  
Sbjct: 411 -------------------------------GNIVAARQVFDGMKIKSLASWNAMICGLA 439

Query: 101 KNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
            +G   +A   F +M   G+ PNE T V  LSA
Sbjct: 440 MHGQADKAFELFSKMSSDGIEPNEITFVGILSA 472



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 63/200 (31%), Positives = 92/200 (46%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI  Y    ++  A  +F+ M   DV + N MI G     +  +ALLL+ +M  + + P+
Sbjct: 201 LIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPN 260

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
             T   VL AC+  +AL  G  +   I   G+  +  + ++LI MY+             
Sbjct: 261 ESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC----------- 309

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGF 69
                               G ++ ARELFD M ++D  SW+ M+ GYT    Y EAL  
Sbjct: 310 --------------------GDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALAL 349

Query: 68  FREMMVSGVPPNESTLVSAL 9
           FREM+ SGV P E T +S L
Sbjct: 350 FREMLASGVEPTEITFLSIL 369


>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
           gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
           [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
           chloroplast RNA editing factor [Arabidopsis thaliana]
          Length = 741

 Score =  183 bits (465), Expect = 7e-44
 Identities = 105/268 (39%), Positives = 155/268 (57%), Gaps = 3/268 (1%)
 Frame = -2

Query: 797 SSPFLFLHPNKLSPTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPT 618
           S PF FL      P++S       R   ++ L   C+TLQ +R +HAQ++  GL      
Sbjct: 14  SYPFHFL------PSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYA 67

Query: 617 AGKLIESYLSMSHIYS---ASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLA 447
             KLIE  +   H      A SVF T++ P++   NTM RG  + + P  AL LY  M++
Sbjct: 68  LSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127

Query: 446 SRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDM 267
             L+P++YT+ FVLK+C+   A  EG+Q+H  ++K G   D YVH+SLI MY  +  L+ 
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLED 187

Query: 266 AQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMY 87
           A +V    P  + +   ++I GY   G+IE A++LFD +  KD  SW+AM+SGY + G Y
Sbjct: 188 AHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNY 247

Query: 86  VEALGFFREMMVSGVPPNESTLVSALSA 3
            EAL  F++MM + V P+EST+V+ +SA
Sbjct: 248 KEALELFKDMMKTNVRPDESTMVTVVSA 275



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 60/202 (29%), Positives = 94/202 (46%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI+ Y S  +I +A  +F+ +   DV + N MI G        +AL L+ +M+ + + PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
             T   V+ AC+   ++  G+QVH  I   G                             
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFG--------------------------- 298

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGF 69
                N  + N++I  Y + G +E A  LF+ +  KD  SW+ ++ GYT   +Y EAL  
Sbjct: 299 ----SNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354

Query: 68  FREMMVSGVPPNESTLVSALSA 3
           F+EM+ SG  PN+ T++S L A
Sbjct: 355 FQEMLRSGETPNDVTMLSILPA 376



 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 6/211 (2%)
 Frame = -2

Query: 671 RQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMG 492
           RQ+H  +   G  + L     LI+ Y     + +A  +F  +   DV + NT+I G T  
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHM 345

Query: 491 NQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIK--AGVSPDTY 318
           N   +ALLL+  ML S   P++ T   +L AC+ L A+  G+ +H  I K   GV+  + 
Sbjct: 346 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS 405

Query: 317 VHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMR--- 147
           + +SLI MYA    ++ A +V      ++    N+MI G+  HG  + + +LF  MR   
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 465

Query: 146 -DKDGASWSAMVSGYTKNGMYVEALGFFREM 57
              D  ++  ++S  + +GM       FR M
Sbjct: 466 IQPDDITFVGLLSACSHSGMLDLGRHIFRTM 496


>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
           gi|482575565|gb|EOA39752.1| hypothetical protein
           CARUB_v10008399mg [Capsella rubella]
          Length = 740

 Score =  181 bits (459), Expect = 4e-43
 Identities = 99/261 (37%), Positives = 155/261 (59%), Gaps = 3/261 (1%)
 Frame = -2

Query: 776 HPNKLSPTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIES 597
           +P +  P+AS       R   ++ L   C TLQ +R +HAQ++ +GL        KLIE 
Sbjct: 14  YPFRFLPSASDPPYDSLRNHPSLSLLHNCNTLQSLRIIHAQMIKTGLHNTNYALSKLIEF 73

Query: 596 YLSMSH---IYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDN 426
            +   H   +  A SVF +++ P++   NTM RG  + + P  AL LY  M++  L+P++
Sbjct: 74  CVLSPHFDGLTYAISVFESIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNS 133

Query: 425 YTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTL 246
           YT+ F+LK+C+   A  EG+Q+H  ++K G   D YVH+SLI MY  +  L+ A++V   
Sbjct: 134 YTFPFLLKSCAKSRAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRLEDARKVFDQ 193

Query: 245 FPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFF 66
               + +   ++I GY  +G+IE A+++FD +  KD  SW+A++SGY + G Y EAL  F
Sbjct: 194 SSHRDVVSYTALIKGYASNGYIESAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELF 253

Query: 65  REMMVSGVPPNESTLVSALSA 3
           +EMM + V P+EST+V+ LSA
Sbjct: 254 KEMMQTNVKPDESTMVTVLSA 274



 Score = 97.1 bits (240), Expect = 9e-18
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 2/225 (0%)
 Frame = -2

Query: 671 RQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMG 492
           RQ+H+ +   G  + L     LI+ Y+    + +AS +F  +   DV + NT+I G T  
Sbjct: 285 RQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHM 344

Query: 491 NQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIK--AGVSPDTY 318
           N   +ALLL+  ML    IP+  T   +L AC+ L A+  G+ +H  I K   GVS  + 
Sbjct: 345 NLYKEALLLFQEMLRLGEIPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSS 404

Query: 317 VHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKD 138
           + +SLI MYA    ++ AQ+V                               FD M ++ 
Sbjct: 405 LRTSLIDMYAKCGDIEAAQQV-------------------------------FDSMLNRS 433

Query: 137 GASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
            +SW+AM+ G+  +G    A   F  M  +G+ P++ T V  LSA
Sbjct: 434 LSSWNAMIFGFAMHGRANAAFDIFSRMGKNGIEPDDITFVGLLSA 478



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 62/202 (30%), Positives = 94/202 (46%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI+ Y S  +I SA  +F+ +   DV + N +I G        +AL L+  M+ + + PD
Sbjct: 205 LIKGYASNGYIESAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMQTNVKPD 264

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
             T   VL AC   +++  G+QVH  I   G                             
Sbjct: 265 ESTMVTVLSACGQSASIELGRQVHSWIDDHGFG--------------------------- 297

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGF 69
                N  + N++I  Y++ G +E A  LF+G+  KD  SW+ ++ GYT   +Y EAL  
Sbjct: 298 ----SNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLL 353

Query: 68  FREMMVSGVPPNESTLVSALSA 3
           F+EM+  G  PNE T++S L A
Sbjct: 354 FQEMLRLGEIPNEVTMLSILPA 375


>ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutrema salsugineum]
           gi|557095503|gb|ESQ36085.1| hypothetical protein
           EUTSA_v10006910mg [Eutrema salsugineum]
          Length = 740

 Score =  181 bits (458), Expect = 5e-43
 Identities = 93/233 (39%), Positives = 146/233 (62%), Gaps = 3/233 (1%)
 Frame = -2

Query: 692 CQTLQEVRQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYS---ASSVFNTMKSPDVFAN 522
           C+TL+ +R++HAQ++ +GL        KLIE  +   H      A SVF T++ P+    
Sbjct: 42  CKTLKSLRKIHAQMIKTGLHNTNYALSKLIELCVLSPHFEGLTYAISVFETIQEPNQLIW 101

Query: 521 NTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIK 342
           NTM+RG  + + P  +L LY +M++  L+P++YT+ F+LK+C+  + L EG+Q+H  ++K
Sbjct: 102 NTMLRGHALSSDPVSSLKLYVSMISLGLLPNSYTFPFLLKSCAKSNTLREGQQIHGHVLK 161

Query: 341 AGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKAREL 162
            G   D YVH+SLI MYA +  L+ AQ+V       + +   ++I+GY   G+ + A+++
Sbjct: 162 FGYGLDLYVHTSLISMYAQNGRLEDAQQVFDRSSHRDVVSYTALITGYASRGYTQSAQKM 221

Query: 161 FDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
           FD + DKD  SW+AM+SGY + G Y EA   F +MM S V P+EST+V+ LSA
Sbjct: 222 FDEIPDKDVVSWNAMISGYVETGYYKEAFELFEDMMKSNVSPDESTMVTVLSA 274



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 6/211 (2%)
 Frame = -2

Query: 671 RQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMG 492
           RQ+H+ +   G  + L     LI+ Y     + +A  +F  M   DV + NT+I G T  
Sbjct: 285 RQVHSWIDDHGFGSNLKIVNALIDLYSKCGEVATACGLFEGMSYKDVVSWNTLIGGYTHM 344

Query: 491 NQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIK--AGVSPDTY 318
           +   +ALLL+  ML S   P++ T   +L AC+ L A+  G+ +H  I K   GV+  + 
Sbjct: 345 SLYKEALLLFQEMLRSNESPNDVTMLSILPACAHLGAIDIGRWIHVYIAKKLKGVTNASS 404

Query: 317 VHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMR--- 147
           + +SLI MYA    ++ A +V       +    N+MI G+  HG    A +LF  MR   
Sbjct: 405 LRTSLIDMYAKCGDIEAAHQVFNSMLHRSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNG 464

Query: 146 -DKDGASWSAMVSGYTKNGMYVEALGFFREM 57
            + DG ++  ++S  + +GM       FR M
Sbjct: 465 IEPDGITFVGLLSACSHSGMLDLGRRIFRSM 495



 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 60/202 (29%), Positives = 91/202 (45%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI  Y S  +  SA  +F+ +   DV + N MI G        +A  L+ +M+ S + PD
Sbjct: 205 LITGYASRGYTQSAQKMFDEIPDKDVVSWNAMISGYVETGYYKEAFELFEDMMKSNVSPD 264

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
             T   VL AC+   ++  G+QV                    H + +  G         
Sbjct: 265 ESTMVTVLSACAQSGSIELGRQV--------------------HSWIDDHGFG------- 297

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGF 69
                N  + N++I  Y + G +  A  LF+GM  KD  SW+ ++ GYT   +Y EAL  
Sbjct: 298 ----SNLKIVNALIDLYSKCGEVATACGLFEGMSYKDVVSWNTLIGGYTHMSLYKEALLL 353

Query: 68  FREMMVSGVPPNESTLVSALSA 3
           F+EM+ S   PN+ T++S L A
Sbjct: 354 FQEMLRSNESPNDVTMLSILPA 375


>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338275|gb|EFH68692.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  180 bits (457), Expect = 6e-43
 Identities = 101/268 (37%), Positives = 157/268 (58%), Gaps = 3/268 (1%)
 Frame = -2

Query: 797 SSPFLFLHPNKLSPTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPT 618
           S PF FL      P++S       R   ++ L   C+TLQ +R +HAQ++ +GL      
Sbjct: 14  SYPFHFL------PSSSDPPYDSLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYA 67

Query: 617 AGKLIESYLSMSHIYS---ASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLA 447
             KL+E  +   H      A SVF T++ P++   NTM RG  + + P  AL LY  M++
Sbjct: 68  LSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127

Query: 446 SRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDM 267
             L+P++YT+ F+LK+C+   A  EG+Q+H  ++K G   D +VH+SLI +Y  +  L+ 
Sbjct: 128 LGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLED 187

Query: 266 AQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMY 87
           A++V    P  + +   ++I GY   G+IE A++LFD +  KD  SW+AM+SGY + G Y
Sbjct: 188 ARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNY 247

Query: 86  VEALGFFREMMVSGVPPNESTLVSALSA 3
            EAL  F+EMM + + P+EST+V+ +SA
Sbjct: 248 KEALELFKEMMKTNIRPDESTMVTVVSA 275



 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 62/202 (30%), Positives = 94/202 (46%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI+ Y S  +I SA  +F+ +   DV + N MI G        +AL L+  M+ + + PD
Sbjct: 206 LIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPD 265

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
             T   V+ AC+   ++  G+QVH  I   G                             
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFG--------------------------- 298

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGF 69
                N  + NS++  Y + G +E A  LF+G+  KD  SW+ ++ GYT   +Y EAL  
Sbjct: 299 ----SNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLL 354

Query: 68  FREMMVSGVPPNESTLVSALSA 3
           F+EM+ SG  PN+ T++S L A
Sbjct: 355 FQEMLRSGERPNDVTMLSILPA 376



 Score = 85.1 bits (209), Expect = 3e-14
 Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 6/211 (2%)
 Frame = -2

Query: 671 RQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMG 492
           RQ+H+ +   G  + L     L++ Y     + +A  +F  +   DV + NT+I G T  
Sbjct: 286 RQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHM 345

Query: 491 NQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIK--AGVSPDTY 318
           N   +ALLL+  ML S   P++ T   +L AC+ L A+  G+ +H  I K     +  + 
Sbjct: 346 NLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASS 405

Query: 317 VHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMR--- 147
           + +SLI MYA    ++ A +V      ++    N+MI G+  HG  + A ++F  MR   
Sbjct: 406 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIG 465

Query: 146 -DKDGASWSAMVSGYTKNGMYVEALGFFREM 57
            + D  ++  ++S  +++GM       FR M
Sbjct: 466 IEPDDITFVGLLSACSRSGMLDLGRHIFRTM 496


>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513376|gb|AES94999.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  176 bits (446), Expect = 1e-41
 Identities = 92/239 (38%), Positives = 147/239 (61%), Gaps = 2/239 (0%)
 Frame = -2

Query: 713 TIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIESYLSM--SHIYSASSVFNTMKS 540
           T+ L ++C  + E++Q+H QL+  G +    T  +L+ +Y SM  S++  A  VF+ + S
Sbjct: 14  TMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISS 73

Query: 539 PDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQV 360
           P+    NTMIR  +  N P +ALLLY+ ML   +  + YT+ F+LKACS LSAL E  Q+
Sbjct: 74  PNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQI 133

Query: 359 HCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWI 180
           H QIIK G   + Y  +SL+ +YA S  +  A  +  L P  + +  N+MI GY++ G +
Sbjct: 134 HVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNV 193

Query: 179 EKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
           E A ++F  M +K+  SW++M+ G+ + GM+ EAL   ++M+V+G+ P++ TL  +LSA
Sbjct: 194 EMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSA 252



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 75/306 (24%), Positives = 119/306 (38%), Gaps = 31/306 (10%)
 Frame = -2

Query: 827 YSNNNPYHMDSSPFLFLHPNKLSPTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLV 648
           YSN+N    D    L L+   L  +    A T    P  +        L E  Q+H Q++
Sbjct: 86  YSNSN----DPEEALLLYHQMLHHSIPHNAYT---FPFLLKACSALSALAETHQIHVQII 138

Query: 647 VSGLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRG-LTMGNQPY--- 480
             G  + +     L+  Y     I SA  +F+ + S D+ + NTMI G +  GN      
Sbjct: 139 KRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYK 198

Query: 479 ---------------------------DALLLYNNMLASRLIPDNYTYTFVLKACSCLSA 381
                                      +AL L   ML + + PD  T +  L AC+ L A
Sbjct: 199 IFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGA 258

Query: 380 LFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISG 201
           L +GK +H  I K  +  D  +  +LI MY                              
Sbjct: 259 LEQGKWIHTYIGKNKIKIDPVLGCALIDMY------------------------------ 288

Query: 200 YLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTL 21
            ++ G ++KA  +F  +  K   +W+A++ G+  +G   EAL +F +M  +G+ P   T 
Sbjct: 289 -VKCGEMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTF 347

Query: 20  VSALSA 3
            + L+A
Sbjct: 348 TAVLTA 353


>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  176 bits (445), Expect = 1e-41
 Identities = 93/232 (40%), Positives = 141/232 (60%), Gaps = 3/232 (1%)
 Frame = -2

Query: 689 QTLQEVRQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYS---ASSVFNTMKSPDVFANN 519
           Q LQ +R +HAQ++ +GL        KLIE  +   H      A SVF T++ P++   N
Sbjct: 1   QILQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWN 60

Query: 518 TMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKA 339
           TM RG  + + P  AL LY  M++  L+P++YT+ F+LK+C+   A  EG+Q+H  ++K 
Sbjct: 61  TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKL 120

Query: 338 GVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELF 159
           G   D YVH+SLI MY  +  L+ A +V    P  + +   ++I GY   G+IE A+++F
Sbjct: 121 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMF 180

Query: 158 DGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
           D +  KD  SW+AM+SGY + G Y EAL  F++MM + V P+EST+V+ +SA
Sbjct: 181 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSA 232



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 61/202 (30%), Positives = 95/202 (47%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI+ Y S  +I +A  +F+ +   DV + N MI G        +AL L+ +M+ + + PD
Sbjct: 163 LIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 222

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
             T   V+ AC+   ++  G+QVH  I   G                             
Sbjct: 223 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFG--------------------------- 255

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGF 69
                N  + N++I  Y + G +E A  LF+G+  KD  SW+ ++ GYT   +Y EAL  
Sbjct: 256 ----SNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEALLL 311

Query: 68  FREMMVSGVPPNESTLVSALSA 3
           F+EM+ SG  PN+ T++S L A
Sbjct: 312 FQEMLRSGETPNDVTMLSILPA 333



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 6/211 (2%)
 Frame = -2

Query: 671 RQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMG 492
           RQ+H+ +   G  + L     LI+ Y     + +A  +F  +   DV + NT+I G T  
Sbjct: 243 RQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHM 302

Query: 491 NQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIK--AGVSPDTY 318
           N   +ALLL+  ML S   P++ T   +L AC+ L A+  G+ +H  I K   GV+  + 
Sbjct: 303 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASS 362

Query: 317 VHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMR--- 147
           + +SLI MYA    ++ A +V      ++    N+MI G+  HG  + + ++F  MR   
Sbjct: 363 LRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNG 422

Query: 146 -DKDGASWSAMVSGYTKNGMYVEALGFFREM 57
            + D  ++  ++S  + +GM       FR M
Sbjct: 423 IEPDDITFVGLLSACSHSGMLDLGRHIFRSM 453


>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
           gi|568824869|ref|XP_006466814.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
           gi|557527644|gb|ESR38894.1| hypothetical protein
           CICLE_v10025166mg [Citrus clementina]
          Length = 622

 Score =  175 bits (444), Expect = 2e-41
 Identities = 96/254 (37%), Positives = 148/254 (58%), Gaps = 2/254 (0%)
 Frame = -2

Query: 758 PTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIE--SYLSM 585
           PT   + +  +    T+ L ++C  ++E++Q+HAQ+   GL        +L+   ++ + 
Sbjct: 6   PTPMNQFSLESNTTHTLSLLNRCSYMEELKQIHAQMFKKGLTVNTILVSRLLAFCTFSNS 65

Query: 584 SHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVL 405
             +  A  VF+ +  P+ F  NTM+RG    ++P  ALLLY  ML+  +  + YT+ F+L
Sbjct: 66  GSLAYAQMVFDRIIKPNTFMWNTMVRGYADSSEPEQALLLYRQMLSHSVSHNAYTFPFLL 125

Query: 404 KACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTL 225
           KACS LSAL E +Q+H QIIK G S + +  +SL+H YA S  +  A+ +    P+ +T+
Sbjct: 126 KACSRLSALEETQQIHAQIIKFGFSSEVFATNSLLHAYAISGSIKSARLIFDHMPQRDTV 185

Query: 224 VKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSG 45
             NSMI GY + G +E A E F  M++K+  SW+ ++SGY   GM  EAL  F EM  +G
Sbjct: 186 SWNSMIDGYTKCGEMELACEFFKDMKEKNVISWTTLISGYVGAGMDKEALHLFHEMQTAG 245

Query: 44  VPPNESTLVSALSA 3
           V P+   LVSA+SA
Sbjct: 246 VKPDNVALVSAVSA 259



 Score = 80.9 bits (198), Expect = 7e-13
 Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 4/265 (1%)
 Frame = -2

Query: 785 LFLHPNKLSPTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKL 606
           L L+   LS + S  A T    P  +    +   L+E +Q+HAQ++  G  + +     L
Sbjct: 103 LLLYRQMLSHSVSHNAYT---FPFLLKACSRLSALEETQQIHAQIIKFGFSSEVFATNSL 159

Query: 605 IESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDN 426
           + +Y     I SA  +F+ M   D  + N+MI G T   +   A   + +M    +I   
Sbjct: 160 LHAYAISGSIKSARLIFDHMPQRDTVSWNSMIDGYTKCGEMELACEFFKDMKEKNVI--- 216

Query: 425 YTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMA----QR 258
            ++T ++          E   +  ++  AGV PD     S +   A+   LD      + 
Sbjct: 217 -SWTTLISGYVGAGMDKEALHLFHEMQTAGVKPDNVALVSAVSACAHLGALDQGRWIDEY 275

Query: 257 VLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEA 78
           +  L  + + ++  ++I  Y + G +E+A ELF  M  K  ++W+A++ G   +G   EA
Sbjct: 276 IKHLGIKIDPILGCALIDMYAKCGDLEEALELFKRMEKKGVSAWTAIIFGLAIHGHGREA 335

Query: 77  LGFFREMMVSGVPPNESTLVSALSA 3
           L +F +M V+   PN  T  + L+A
Sbjct: 336 LNWFSKMQVARTKPNLVTFTAILTA 360


>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508783730|gb|EOY30986.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 847

 Score =  175 bits (443), Expect = 3e-41
 Identities = 100/266 (37%), Positives = 157/266 (59%), Gaps = 2/266 (0%)
 Frame = -2

Query: 794 SPFLFLHPNKLSPTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTA 615
           SPF    P  L P++ P        P    L+ KC+T+Q ++Q+H  ++ +GL       
Sbjct: 69  SPF----PLHLLPSSDPPYKLLQNHPSLSLLS-KCRTIQTLKQVHCHIIKTGLHHTQFAL 123

Query: 614 GKLIE--SYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASR 441
            KLIE  +      +  A  +F ++  P+    NTMIRG ++ + P   L  Y  M+ S 
Sbjct: 124 SKLIEFCAVSPFGDLPYALLLFESIDEPNQVIWNTMIRGFSLSSSPGLTLEFYVKMIWSG 183

Query: 440 LIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQ 261
           ++P++YT+ FVLK+C+  ++  EGKQ+H Q++K G+  D +VH+SLI+MYA +     A+
Sbjct: 184 IVPNSYTFPFVLKSCAKTASTQEGKQIHGQVLKLGLESDAFVHTSLINMYAQNGEFGNAR 243

Query: 260 RVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVE 81
            V       +T+   ++I+GY+  G++E AR+LFD +  +D  SW+AM++GY + G + E
Sbjct: 244 LVFDKSHLRDTVSYTALITGYVSIGYMENARKLFDEIPIRDVVSWNAMIAGYAQTGQHEE 303

Query: 80  ALGFFREMMVSGVPPNESTLVSALSA 3
           AL FF EM+ + V PNESTLVS LSA
Sbjct: 304 ALAFFEEMIGANVVPNESTLVSVLSA 329



 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 68/213 (31%), Positives = 106/213 (49%)
 Frame = -2

Query: 641 GLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLY 462
           GL + +  A  LI+ Y     + +A  +F  ++  DV + N MI G T  +   +AL L+
Sbjct: 350 GLGSNIHLANALIDMYSKCGDLDTAFDLFEGLQQRDVISWNVMIGGYTHMSYYKEALGLF 409

Query: 461 NNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANS 282
             ML S + P + T+  VL AC+ L AL  GK +H  I K       + +S+ I ++   
Sbjct: 410 RRMLRSNIEPSDVTFLSVLPACANLGALDLGKWIHAYIDK------NFQNSTNISLWT-- 461

Query: 281 DGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYT 102
                                 S+I  Y + G IE A+++F+GM  K+ ASW+AM+SG  
Sbjct: 462 ----------------------SLIDMYAKCGSIEAAQQVFNGMEQKNLASWNAMISGLA 499

Query: 101 KNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
            +G+  +AL  F +MM  G+ P++ T V  LSA
Sbjct: 500 MHGLADKALELFSQMMGGGLKPDDITFVGVLSA 532



 Score = 94.4 bits (233), Expect = 6e-17
 Identities = 58/202 (28%), Positives = 96/202 (47%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI  Y+S+ ++ +A  +F+ +   DV + N MI G     Q  +AL  +  M+ + ++P+
Sbjct: 260 LITGYVSIGYMENARKLFDEIPIRDVVSWNAMIAGYAQTGQHEEALAFFEEMIGANVVPN 319

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
             T   VL AC+   +L  G  V   I + G+  + ++ ++LI MY+    LD       
Sbjct: 320 ESTLVSVLSACAQSGSLELGTWVRSWINEHGLGSNIHLANALIDMYSKCGDLDT------ 373

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGF 69
                                    A +LF+G++ +D  SW+ M+ GYT    Y EALG 
Sbjct: 374 -------------------------AFDLFEGLQQRDVISWNVMIGGYTHMSYYKEALGL 408

Query: 68  FREMMVSGVPPNESTLVSALSA 3
           FR M+ S + P++ T +S L A
Sbjct: 409 FRRMLRSNIEPSDVTFLSVLPA 430



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI+ Y     I +A  VFN M+  ++ + N MI GL M      AL L++ M+   L PD
Sbjct: 463 LIDMYAKCGSIEAAQQVFNGMEQKNLASWNAMISGLAMHGLADKALELFSQMMGGGLKPD 522

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKA-GVSPDTYVHSSLIHMYANSDGLDMAQRVL 252
           + T+  VL AC+    L  G+Q    +++   +SPD   +  ++++   +   D A+ ++
Sbjct: 523 DITFVGVLSACTHAGLLDLGRQYFSSMVQEYAISPDLQHYGCMVNLLGRAGLFDEAEALI 582


>ref|XP_007046897.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508699158|gb|EOX91054.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 529

 Score =  174 bits (442), Expect = 3e-41
 Identities = 92/239 (38%), Positives = 140/239 (58%), Gaps = 2/239 (0%)
 Frame = -2

Query: 713 TIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIESYLSMSH--IYSASSVFNTMKS 540
           T+ + ++C  ++E++Q+HAQ+  +GL+A   T  +++   +S  +  +  A  VF+ +  
Sbjct: 21  TLSVLERCSRMEELKQIHAQMFKTGLVADTITVSRILTFCVSPKYGNLEYAQMVFDRVSR 80

Query: 539 PDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFEGKQV 360
           P+ F  NTMIRG +   +P  A LLY  ML   +  ++YT+ F+LKACS L A+ E KQ+
Sbjct: 81  PNTFMYNTMIRGYSNNKEPEKAFLLYQQMLCHSVPHNSYTFPFLLKACSSLLAIEETKQI 140

Query: 359 HCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWI 180
           H  +IK G   + +  +SL+H+YA S  +  A+ +  L PE + +  NSMI  Y + G +
Sbjct: 141 HAHVIKLGFGSEVFATNSLLHVYATSGSIKAARLLFDLVPERDIVSWNSMIGCYTKCGKM 200

Query: 179 EKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
           E A E F  M  K+  SW+ M+SGY   GMY EAL  F EM + GV P+   L S LSA
Sbjct: 201 EIAYEFFKDMPTKNVISWTTMISGYVGAGMYKEALNLFHEMQIEGVKPDNVALASTLSA 259



 Score = 71.2 bits (173), Expect = 5e-10
 Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 38/255 (14%)
 Frame = -2

Query: 707 FLNDKCQTL---QEVRQLHAQLVVSGLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSP 537
           FL   C +L   +E +Q+HA ++  G  + +     L+  Y +   I +A  +F+ +   
Sbjct: 123 FLLKACSSLLAIEETKQIHAHVIKLGFGSEVFATNSLLHVYATSGSIKAARLLFDLVPER 182

Query: 536 DVFANN-------------------------------TMIRGLTMGNQPYDALLLYNNML 450
           D+ + N                               TMI G        +AL L++ M 
Sbjct: 183 DIVSWNSMIGCYTKCGKMEIAYEFFKDMPTKNVISWTTMISGYVGAGMYKEALNLFHEMQ 242

Query: 449 ASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLD 270
              + PDN      L ACS L AL +G+ +H  I + GV  D  +   LI M+A    ++
Sbjct: 243 IEGVKPDNVALASTLSACSHLGALDQGRWIHAYIDRIGVEIDPILGCVLIDMFAKCGDME 302

Query: 269 MAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRD----KDGASWSAMVSGYT 102
            A  V     ++   +  ++ISG+  HG  ++A   FD M+      +  +++A+++  +
Sbjct: 303 EALEVFRKVKKKEVSLWTAVISGFAIHGRGKEALVWFDIMQKVGIRPNHITFTAILTACS 362

Query: 101 KNGMYVEALGFFREM 57
            +G+  E    ++ M
Sbjct: 363 HSGLVEEGKSLYKSM 377


>ref|XP_006475804.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
          Length = 736

 Score =  174 bits (441), Expect = 4e-41
 Identities = 93/272 (34%), Positives = 154/272 (56%), Gaps = 2/272 (0%)
 Frame = -2

Query: 812 PYHMDSSPFLFLHPNKLSPTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLL 633
           P  +  SP +   P    P        P+     + L  KC  +Q ++Q+H+Q++ +GL 
Sbjct: 5   PSSLTLSPSILHFPPSSDPPYKLLQNQPS-----LALLSKCTNMQNIKQVHSQIIKTGLH 59

Query: 632 ARLPTAGKLIE--SYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYN 459
                  KLIE  +      +  A  VF T++ P+    N +IRG ++ + P  A+  Y 
Sbjct: 60  NTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYV 119

Query: 458 NMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSD 279
            M+ S  +P+ YT+ F+LK+C+ +SA+ EGKQ+H  ++K G+  D +VH+SLI+MYA + 
Sbjct: 120 RMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNG 179

Query: 278 GLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTK 99
            L+ A+ V       + +   ++I+GY   G+++ AR+LFD M  +D  SW+AM++GY +
Sbjct: 180 ELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPVRDVVSWNAMIAGYAQ 239

Query: 98  NGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
           +G Y EAL  F+++      PNEST+V+ LSA
Sbjct: 240 SGRYEEALAIFQKIREENFVPNESTVVTVLSA 271



 Score = 98.2 bits (243), Expect = 4e-18
 Identities = 68/213 (31%), Positives = 100/213 (46%)
 Frame = -2

Query: 641 GLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLY 462
           GL + L     LI+ Y     +  A  +F +++  DV + N MI G T  +   +AL+L+
Sbjct: 292 GLGSNLHVTNALIDMYSKCGDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLF 351

Query: 461 NNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANS 282
             ML S + P++ T+  VL AC+ L AL  GK +H  I K         H  L       
Sbjct: 352 RQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKN--------HQKL------- 396

Query: 281 DGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYT 102
                           N  +  S+I  Y + G I+ A ++FDGM  K  ASW+AM+SG  
Sbjct: 397 ---------------NNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLA 441

Query: 101 KNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
            +G   +AL  F  M+  G+ P++ T V  LSA
Sbjct: 442 MHGKADKALSLFSRMIGEGLQPDDITFVGVLSA 474



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 1/203 (0%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI  Y S  ++  A  +F+ M   DV + N MI G     +  +AL ++  +     +P+
Sbjct: 202 LITGYASRGYLDDARQLFDEMPVRDVVSWNAMIAGYAQSGRYEEALAIFQKIREENFVPN 261

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKA-GVSPDTYVHSSLIHMYANSDGLDMAQRVL 252
             T   VL AC+ + +L  G  V C +I+  G+  + +V ++LI MY+            
Sbjct: 262 ESTVVTVLSACAHMGSLELGNWV-CSLIEGHGLGSNLHVTNALIDMYSKC---------- 310

Query: 251 TLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALG 72
                                G + KAR+LF+ +  +D  SW+ M+ GYT    Y EAL 
Sbjct: 311 ---------------------GDLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALM 349

Query: 71  FFREMMVSGVPPNESTLVSALSA 3
            FR+M+ S + PN+ T +S L A
Sbjct: 350 LFRQMLQSNIEPNDVTFLSVLPA 372


>ref|XP_006450982.1| hypothetical protein CICLE_v10010823mg [Citrus clementina]
           gi|557554208|gb|ESR64222.1| hypothetical protein
           CICLE_v10010823mg [Citrus clementina]
          Length = 736

 Score =  174 bits (441), Expect = 4e-41
 Identities = 93/272 (34%), Positives = 154/272 (56%), Gaps = 2/272 (0%)
 Frame = -2

Query: 812 PYHMDSSPFLFLHPNKLSPTASPRATTPARIPGTIFLNDKCQTLQEVRQLHAQLVVSGLL 633
           P  +  SP +   P    P        P+     + L  KC  +Q ++Q+H+Q++ +GL 
Sbjct: 5   PSSLTLSPSILHFPPSSDPPYKLLQNQPS-----LALLSKCTNMQNIKQVHSQIIKTGLH 59

Query: 632 ARLPTAGKLIE--SYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYN 459
                  KLIE  +      +  A  VF T++ P+    N +IRG ++ + P  A+  Y 
Sbjct: 60  NTQFALSKLIEICAVSPFGDLSYALLVFETIREPNQVIWNNIIRGHSLSSSPVVAIKFYV 119

Query: 458 NMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSD 279
            M+ S  +P+ YT+ F+LK+C+ +SA+ EGKQ+H  ++K G+  D +VH+SLI+MYA + 
Sbjct: 120 RMILSGFVPNTYTFPFILKSCAKISAISEGKQIHAHVLKLGLESDPFVHTSLINMYAQNG 179

Query: 278 GLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTK 99
            L+ A+ V       + +   ++I+GY   G+++ AR+LFD M  +D  SW+AM++GY +
Sbjct: 180 ELESARLVFNKSSLRDAVSYTALITGYASRGYLDDARQLFDEMPVRDVVSWNAMIAGYAQ 239

Query: 98  NGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
           +G Y EAL  F+++      PNEST+V+ LSA
Sbjct: 240 SGRYEEALAIFQKIREENFVPNESTVVTVLSA 271



 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 68/213 (31%), Positives = 100/213 (46%)
 Frame = -2

Query: 641 GLLARLPTAGKLIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLY 462
           GL + L     LI+ Y     +  A  +F +++  DV + N MI G T  +   +AL+L+
Sbjct: 292 GLGSNLHVTNALIDMYSKCGGLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALMLF 351

Query: 461 NNMLASRLIPDNYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANS 282
             ML S + P++ T+  VL AC+ L AL  GK +H  I K         H  L       
Sbjct: 352 RQMLQSNIEPNDVTFLSVLPACAYLGALDLGKWIHAYIDKN--------HQKL------- 396

Query: 281 DGLDMAQRVLTLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYT 102
                           N  +  S+I  Y + G I+ A ++FDGM  K  ASW+AM+SG  
Sbjct: 397 ---------------NNVSLWTSLIDMYAKCGNIKAAEQVFDGMGYKTLASWNAMISGLA 441

Query: 101 KNGMYVEALGFFREMMVSGVPPNESTLVSALSA 3
            +G   +AL  F  M+  G+ P++ T V  LSA
Sbjct: 442 MHGKADKALSLFSRMIGEGLQPDDITFVGVLSA 474



 Score = 90.5 bits (223), Expect = 8e-16
 Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 1/203 (0%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI  Y S  ++  A  +F+ M   DV + N MI G     +  +AL ++  +     +P+
Sbjct: 202 LITGYASRGYLDDARQLFDEMPVRDVVSWNAMIAGYAQSGRYEEALAIFQKIREENFVPN 261

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKA-GVSPDTYVHSSLIHMYANSDGLDMAQRVL 252
             T   VL AC+ + +L  G  V C +I+  G+  + +V ++LI MY+            
Sbjct: 262 ESTVVTVLSACAHMGSLELGNWV-CSLIEGHGLGSNLHVTNALIDMYSKC---------- 310

Query: 251 TLFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALG 72
                                G + KAR+LF+ +  +D  SW+ M+ GYT    Y EAL 
Sbjct: 311 ---------------------GGLVKARDLFESIEKRDVISWNVMIGGYTHTSDYKEALM 349

Query: 71  FFREMMVSGVPPNESTLVSALSA 3
            FR+M+ S + PN+ T +S L A
Sbjct: 350 LFRQMLQSNIEPNDVTFLSVLPA 372


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  174 bits (440), Expect = 6e-41
 Identities = 91/243 (37%), Positives = 144/243 (59%), Gaps = 6/243 (2%)
 Frame = -2

Query: 713 TIFLNDKCQTLQEVRQLHAQLVVSGLLARLPTAGKLIE------SYLSMSHIYSASSVFN 552
           T+FL DKC+T+ +++Q+   L VSG L     A K+I       +  S+SH Y    +F 
Sbjct: 13  TLFLLDKCRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLSHAYR---LFL 69

Query: 551 TMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPDNYTYTFVLKACSCLSALFE 372
            ++    F  NT+IR     N+P  A++L+ NML S  +P+NYTY+F+ KAC+ L+ L+ 
Sbjct: 70  GLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTDLNNLYL 129

Query: 371 GKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLTLFPEENTLVKNSMISGYLR 192
           G   HCQ IK G     +V + L+HM+A    +D A+++  L    + +   ++I+GY+R
Sbjct: 130 GLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVR 189

Query: 191 HGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGFFREMMVSGVPPNESTLVSA 12
            G +   RELFD M +++  SWSAM++GY + G + EAL  F  M++SG  PN + +V A
Sbjct: 190 AGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCA 249

Query: 11  LSA 3
           ++A
Sbjct: 250 INA 252



 Score = 73.9 bits (180), Expect = 8e-11
 Identities = 54/202 (26%), Positives = 87/202 (43%)
 Frame = -2

Query: 608 LIESYLSMSHIYSASSVFNTMKSPDVFANNTMIRGLTMGNQPYDALLLYNNMLASRLIPD 429
           LI  Y+    +     +F+ M   +  + + MI G        +AL L+N ML S   P+
Sbjct: 183 LINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPN 242

Query: 428 NYTYTFVLKACSCLSALFEGKQVHCQIIKAGVSPDTYVHSSLIHMYANSDGLDMAQRVLT 249
           +      + AC+ L AL +G+ +HC I +  +  D  + ++LI MYA             
Sbjct: 243 HAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYA------------- 289

Query: 248 LFPEENTLVKNSMISGYLRHGWIEKARELFDGMRDKDGASWSAMVSGYTKNGMYVEALGF 69
                             + G IE A  +F  +R++D   ++ ++SG   +G    A+  
Sbjct: 290 ------------------KCGCIEIACSIFGELRNRDVHVYTCLISGLANHGQSATAVEL 331

Query: 68  FREMMVSGVPPNESTLVSALSA 3
           F  M   GV PNE T VS L+A
Sbjct: 332 FERMHSEGVVPNEVTFVSVLNA 353