BLASTX nr result

ID: Akebia24_contig00014590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00014590
         (754 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu]       70   8e-10
ref|XP_007027153.1| RNA-binding family protein with retrovirus z...    65   3e-08
ref|XP_007205642.1| hypothetical protein PRUPE_ppa009294mg [Prun...    63   1e-07

>gb|EMS67637.1| Neurofilament heavy polypeptide [Triticum urartu]
          Length = 431

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 49/117 (41%), Positives = 56/117 (47%)
 Frame = -1

Query: 352 LHPPRVVFFNLNDLVEGFWVFARPGGLW*EGALGGFGRYSXXXXXXXXXXXXXXXCVFVW 173
           LHP  +V     D+V G +  +     W EGALGG G YS                    
Sbjct: 75  LHPMALVI----DMVLGAYPTSVSMVDWWEGALGGIGGYSRK------------------ 112

Query: 172 KWQPSQSGVLFI*GAKYHTLTYLNHDGLTVSGKHFRRVRDVDMKHDFAFVEFSDPRD 2
                     FI   +  T  YL  DG+TVSG HF RVR VDMKH+FAFVEFSDPRD
Sbjct: 113 ----------FI--LRGDTFLYLRLDGVTVSGNHFHRVRHVDMKHEFAFVEFSDPRD 157


>ref|XP_007027153.1| RNA-binding family protein with retrovirus zinc finger-like domain,
           putative [Theobroma cacao] gi|508715758|gb|EOY07655.1|
           RNA-binding family protein with retrovirus zinc
           finger-like domain, putative [Theobroma cacao]
          Length = 312

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 32/60 (53%), Positives = 38/60 (63%)
 Frame = -1

Query: 181 FVWKWQPSQSGVLFI*GAKYHTLTYLNHDGLTVSGKHFRRVRDVDMKHDFAFVEFSDPRD 2
           F   W+P   G       +     YL++DGLTVS  +FRR+RDVDMKHDFAFVE S PRD
Sbjct: 40  FCLTWRPMVRGSALAELVEIPAQCYLSNDGLTVSSNNFRRIRDVDMKHDFAFVELSYPRD 99


>ref|XP_007205642.1| hypothetical protein PRUPE_ppa009294mg [Prunus persica]
           gi|462401284|gb|EMJ06841.1| hypothetical protein
           PRUPE_ppa009294mg [Prunus persica]
          Length = 282

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = -1

Query: 115 LTYLNHDGLTVSGKHFRRVRDVDMKHDFAFVEFSDPRD 2
           L YL++D LTVSG   RRVRDVDMK +FAFVEFSDPRD
Sbjct: 3   LKYLSNDSLTVSGNRLRRVRDVDMKREFAFVEFSDPRD 40


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