BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00014519
         (2119 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]      451   e-124
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]   436   e-119
ref|XP_007051395.1| Homeodomain-like superfamily protein isoform...   426   e-116
ref|XP_006444706.1| hypothetical protein CICLE_v10018964mg [Citr...   419   e-114
ref|XP_006491389.1| PREDICTED: protein LHY-like isoform X1 [Citr...   418   e-114
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]             412   e-112
ref|XP_007051399.1| Homeodomain-like superfamily protein isoform...   405   e-110
dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|2196...   400   e-109
ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Popu...   399   e-108
ref|XP_007051397.1| Homeodomain-like superfamily protein isoform...   393   e-106
ref|XP_002515093.1| conserved hypothetical protein [Ricinus comm...   388   e-105
gb|ABK96054.1| unknown [Populus trichocarpa]                          379   e-102
ref|XP_007218929.1| hypothetical protein PRUPE_ppa001765mg [Prun...   378   e-102
dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|2196...   377   e-102
gb|AAQ73524.1| circadian clock associated1 [Mesembryanthemum cry...   377   e-101
ref|XP_006491393.1| PREDICTED: protein LHY-like isoform X5 [Citr...   375   e-101
ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cice...   373   e-100
ref|NP_001236400.1| MYB transcription factor MYB114 [Glycine max...   368   5e-99
ref|XP_007051396.1| Homeodomain-like superfamily protein isoform...   367   2e-98
ref|XP_004306608.1| PREDICTED: protein CCA1-like [Fragaria vesca...   365   3e-98

>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score =  451 bits (1161), Expect = e-124
 Identities = 293/689 (42%), Positives = 359/689 (52%), Gaps = 88/689 (12%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+ YSS E+LIIKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDIYSSGEDLIIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVST------ 1469
            IRSHAQKFFSKLEKEALVKG  +GQ +D                   T  +  T      
Sbjct: 61   IRSHAQKFFSKLEKEALVKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGVAAPTLQAGTK 120

Query: 1468 --------SSLVGAKQTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
                    SS    KQ  ++E +   E P+G EK     E  DE++ SEV T  QEAPC 
Sbjct: 121  DGKLLASVSSSHPGKQILDLEKDPLPERPSGDEKPGNENENQDEDNCSEVFTLFQEAPCT 180

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATD-------------------- 1193
            S+SSA+K+ I T +    SC  REFVP  +KE S+Q  T+                    
Sbjct: 181  SMSSANKNSIPTPVPLRNSCTFREFVP-LMKEGSNQDETNESYITVEPKGNQKLDKPDFR 239

Query: 1192 ------------NCMNEAPKHEKQVNGERTNEVRKPEKLRKFPTDETQPNQSFPRHVPVH 1049
                        N  N  P HEK V  E+T+E  + E     P +E Q  Q+FPRHVPVH
Sbjct: 240  QKAQDSGMSKASNLENSHPSHEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPRHVPVH 299

Query: 1048 IVDGSPRTCVKTPFPDM-FPSSILYQGGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSM 872
            ++DGS  TC + P  +M +  S+++Q G H +P+LF NP                   S 
Sbjct: 300  VLDGSLGTCTQAPSSEMTYGESLVHQIGIHGHPNLFQNPAASAATEHQNNGSRSSIHQSF 359

Query: 871  PNFPPPFIPFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETT 713
            P F  PF P   NQD YRS L +S TF SL+V  +       A  S A +FWPC+N+E +
Sbjct: 360  PTFHTPFGPIRSNQDDYRSFLQISSTFSSLIVSTLLQNPAAHAAASFAATFWPCSNMEAS 419

Query: 712  VDSP---------------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPT 578
             DSP               P+M  I             AHG+ PLC P H GF C  A  
Sbjct: 420  ADSPSGTIGGFPARQINPAPSMAAIAAATVAAATAWWAAHGVLPLCAPLHTGFTCAPASA 479

Query: 577  TAI-------LPVVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXX 419
            T++        P  N E + N P D      +QLD E SEA + QH              
Sbjct: 480  TSVPPTNTGQAPAANTERRENTPQD------QQLDLECSEALQAQHSASKSPAMSSSDSE 533

Query: 418  XXXXXXSNGNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASE 239
                   N     P D+E+    +T  +D TK+K+RK VDR          SEVE +A E
Sbjct: 534  ESGGAKPNTESTAP-DNEKNTTAVTELNDPTKMKSRKQVDRSSCGSNTPSSSEVETDALE 592

Query: 238  KHEKGKDESKEPD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSF 77
            KHE G++E KE D      E NNRR R+TS LNESWKEVS+ GRLAF+ALFSREVLPQSF
Sbjct: 593  KHENGEEECKEADVNQAAGEANNRRCRSTSILNESWKEVSEEGRLAFRALFSREVLPQSF 652

Query: 76   S-----LNKG-QPQNSTEDGKQNDEKDED 8
            S      NKG Q ++  E+ +  DEK E+
Sbjct: 653  SPPHDLKNKGLQNKDFIENEQGGDEKHEN 681


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score =  436 bits (1121), Expect = e-119
 Identities = 284/677 (41%), Positives = 349/677 (51%), Gaps = 88/677 (12%)
 Frame = -1

Query: 1774 KTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKL 1595
            +TRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKL
Sbjct: 99   QTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKL 158

Query: 1594 EKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVST--------------SSLV 1457
            EKEALVKG  +GQ +D                   T  +  T              SS  
Sbjct: 159  EKEALVKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGVAAPTLQAGTKDGKLLASVSSXH 218

Query: 1456 GAKQTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCASISSASKSYIQT 1277
              KQ  ++E +   E P+G EK     E  DE++ SEV T  QEAPC S+SSA+K+ I T
Sbjct: 219  PGKQILDLEKDPLPERPSGDEKPGNENENQDEDNCSEVFTLFQEAPCTSMSSANKNSIPT 278

Query: 1276 SIVQAKSCNLREFVPSSVKEISDQGATD-------------------------------- 1193
             +    SC  REFVP  +KE S+Q  T+                                
Sbjct: 279  PVPLRNSCTFREFVP-LMKEGSNQDETNESYITVEPKGNQKLDKPDFRQKAQDSGMSKAS 337

Query: 1192 NCMNEAPKHEKQVNGERTNEVRKPEKLRKFPTDETQPNQSFPRHVPVHIVDGSPRTCVKT 1013
            N  N  P HEK V  E+T+E  + E     P +E Q  Q+FPRHVPVH++DGS  TC + 
Sbjct: 338  NLENSHPSHEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPRHVPVHVLDGSLGTCTQA 397

Query: 1012 PFPDM-FPSSILYQGGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFIPFVH 836
            P  +M +  S+++Q G H +P+LF NP                   S P F  PF P   
Sbjct: 398  PSSEMTYGESLVHQIGIHGHPNLFQNPAASAATEHQNNGSRSSIHQSFPTFHTPFGPIRS 457

Query: 835  NQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETTVDSP-------- 701
            NQD YRS L +S TF SL+V  +       A  S A +FWPC+N+E + DSP        
Sbjct: 458  NQDDYRSFLQISSTFSSLIVSTLLQNPAAHAAASFAATFWPCSNMEASADSPSGTIGGFP 517

Query: 700  -------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAI-------LP 563
                   P+M  I             AHG+ PLC P H GF C  A  T++        P
Sbjct: 518  ARQINPAPSMAAIAAATVAAATAWWAAHGVLPLCAPLHTGFTCAPASATSVPPTNTGQAP 577

Query: 562  VVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSNGNEL 383
              N E + N P D      +QLD E SEA + QH                     N    
Sbjct: 578  AANTERRENTPQD------QQLDLECSEALQAQHSASKSPAMSSSDSEESGGAKPNTEST 631

Query: 382  KPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKDESKEP 203
             P D+E+    +T  +D TK+K+RK VDR          SEVE +A EKHE G++E KE 
Sbjct: 632  AP-DNEKNTTAVTELNDPTKMKSRKQVDRSSCGSNTPSSSEVETDALEKHENGEEECKEA 690

Query: 202  D------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSFS-----LNKG-Q 59
            D      E NNRR R+TS LNESWKEVS+ GRLAF+ALFSREVLPQSFS      NKG Q
Sbjct: 691  DVNQAAGEANNRRCRSTSILNESWKEVSEEGRLAFRALFSREVLPQSFSPPHDLKNKGLQ 750

Query: 58   PQNSTEDGKQNDEKDED 8
             ++  E+ +  DEK E+
Sbjct: 751  NKDFIENEQGGDEKHEN 767


>ref|XP_007051395.1| Homeodomain-like superfamily protein isoform 1 [Theobroma cacao]
            gi|590720710|ref|XP_007051405.1| Homeodomain-like
            superfamily protein isoform 1 [Theobroma cacao]
            gi|590720714|ref|XP_007051406.1| Homeodomain-like
            superfamily protein isoform 1 [Theobroma cacao]
            gi|508703656|gb|EOX95552.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508703666|gb|EOX95562.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
            gi|508703667|gb|EOX95563.1| Homeodomain-like superfamily
            protein isoform 1 [Theobroma cacao]
          Length = 739

 Score =  426 bits (1095), Expect = e-116
 Identities = 284/658 (43%), Positives = 352/658 (53%), Gaps = 59/658 (8%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYSS EEL+IKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTSSLVGA 1451
            IRSHAQKFFSKLEKEAL KG  +GQ LD                   T A  +T++ VGA
Sbjct: 61   IRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGA--ATTAQVGA 118

Query: 1450 K----QTP----------NVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
            K    +TP          ++E     E P G EK +  K+  D +S SEV+T   EA C+
Sbjct: 119  KDGKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQD-DSCSEVVTLLHEANCS 177

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGAT--DNCMNEAPKHEKQVNGERT 1139
            S+SS +K+ I TS     SC  REFVPS  + I D G +   N  N    HEK   G++ 
Sbjct: 178  SVSSVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLDNSCTSHEKAAQGQKK 237

Query: 1138 NEVRKPEKLRKFPTDETQPNQSFPRHVPVHIVDGSPRTCVKTPFPDM-FPSSILY-QGGA 965
            ++V    +      DETQ  Q++PRHV VH++DGS  T  + P  DM F  S+ +  G  
Sbjct: 238  DDVDGGLR-----ADETQATQNYPRHVAVHVLDGSLGTGAQNPSLDMPFQDSVFHPMGDV 292

Query: 964  HLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFIPFVHNQDTYRSLLNVSPTFPS 785
            H   +LF NP                   + P F PPF     N + YRS L+VS TF S
Sbjct: 293  HGQTNLFANP-AASATTEHQNNAPRSTHQAFPTFHPPFTHVCPNPEDYRSFLHVSSTFSS 351

Query: 784  LVVPNV-------APPSLAGSFWPCTNVETTVDSP---------------PNMVEIXXXX 671
            L+   +       A  S A +FWP  NV+++ DSP               P+M  I    
Sbjct: 352  LIASTLLQNPAAHAAASFAATFWPYANVDSSADSPACSQGGFPSRQMNPAPSMAAIAAAT 411

Query: 670  XXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAILPVVNK-------EGKVNGPHDPPWE 512
                     AHG+ PLC P H GF C  A   A+ P+ N+       E K N   D   +
Sbjct: 412  VAAATAWWAAHGLLPLCAPLHTGFTCALASAAAVPPMDNEQAPATKMERKDNNDQDLSMQ 471

Query: 511  VQEQLDPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSNGNELKPTDHEQKPAPITGFHD 332
              +QLDPE+SEA + QH                     N   +K  D ++K A +T   D
Sbjct: 472  -DQQLDPEYSEALQAQHSASKSPTSSSSDSEACGDAKVN-TGVKAAD-DEKAAAVTEPQD 528

Query: 331  STKVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKDESKEPD------ELNNRRGRTT 170
            + K K RK VDR          SEVE +  EK+EK K+++K  D      E  NRRGR+ 
Sbjct: 529  ANKTKNRKQVDRSSCGSNTPSSSEVETDVLEKYEKDKEDAKGADANHPQVECCNRRGRSC 588

Query: 169  SNLNESWKEVSQVGRLAFQALFSREVLPQSFS-----LNKGQPQNSTEDGKQN-DEKD 14
            SN ++SWKEVS+ GRLAFQALFSREVLPQSFS      NKGQ ++  ED KQN DEKD
Sbjct: 589  SNPSDSWKEVSEGGRLAFQALFSREVLPQSFSPPHDGKNKGQQKDKVEDDKQNSDEKD 646


>ref|XP_006444706.1| hypothetical protein CICLE_v10018964mg [Citrus clementina]
            gi|567904438|ref|XP_006444707.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904440|ref|XP_006444708.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904442|ref|XP_006444709.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|567904444|ref|XP_006444710.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546968|gb|ESR57946.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546969|gb|ESR57947.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546970|gb|ESR57948.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546971|gb|ESR57949.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
            gi|557546972|gb|ESR57950.1| hypothetical protein
            CICLE_v10018964mg [Citrus clementina]
          Length = 765

 Score =  419 bits (1078), Expect = e-114
 Identities = 283/687 (41%), Positives = 351/687 (51%), Gaps = 86/687 (12%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYSS E+L++KTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTK AVQ
Sbjct: 1    MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTSSLVGA 1451
            IRSHAQKFFSKLEKEAL KG  +GQ +D                   T  +   S  +GA
Sbjct: 61   IRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPMSQ-IGA 119

Query: 1450 K--------------QTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
            K              Q  ++E     + P G EK     E   +++ SEV    QEA C+
Sbjct: 120  KDGKLRSSVSSLRCNQVLDLEKEPICDRPNGDEKPTYTIES-QKDNCSEVFILHQEAHCS 178

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATD-------------------- 1193
            S+SS +K+ + T +    SCNLREFVPS +KE+ +Q  T                     
Sbjct: 179  SVSSVNKNSMPTPVGLRDSCNLREFVPS-LKEVVNQDETRESYVTVELKANEKFGKPDAK 237

Query: 1192 ------------NCMNEAPKHEKQVNGERTNEVRKPEKLRKFPTDETQPNQSFPRHVPVH 1049
                        N  N  P HEK V+GE+ ++V         PT E Q  Q++PRHV VH
Sbjct: 238  LALQDNGSSKPLNLENACPSHEKSVHGEKRDDVADA-----LPTAEVQATQNYPRHVNVH 292

Query: 1048 IVDGSPRTCVKTPFPDMFPSSILYQ-GGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSM 872
            I+DGS  T  ++P       SI +  G  H NP+LFTNP                     
Sbjct: 293  ILDGSLGTGTQSPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQS-F 351

Query: 871  PNFPPPFIPFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETT 713
            P F PPF  F H+QD YRS L++S  F SL+V  +       A  S A +FWP TN+ET+
Sbjct: 352  PTFHPPFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNMETS 411

Query: 712  VDSP---------------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPT 578
             DSP               P+M  I             AHG+ PLC PFH  F CP A  
Sbjct: 412  ADSPTCPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCAPFHTPFTCPPACA 471

Query: 577  TAI-------LPVVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXX 419
            TA+       +P    +   N P +P  +   Q D E+SEA + Q+              
Sbjct: 472  TAVSSMDTAQVPAAKTDKNDNTPPNPALK-DHQPDLEYSEALQAQNSASKSLTVLTSDSE 530

Query: 418  XXXXXXSNGNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASE 239
                      ELK TDHE K +     HDS K K RK VDR          SEVE +A E
Sbjct: 531  ESASAKLK-MELKATDHE-KNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALE 588

Query: 238  KHEKGKDESKEPD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSF 77
            K EKGK+ESKE D      +  NRR R++SN+ +SWKEVS+VGRLAFQALFSREVLPQSF
Sbjct: 589  KQEKGKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEVGRLAFQALFSREVLPQSF 648

Query: 76   S----LNKGQPQNSTEDGKQNDEKDED 8
            S    L     Q++ ED +  ++KD D
Sbjct: 649  SPPHDLKDKMQQDNVEDKQNGNKKDGD 675


>ref|XP_006491389.1| PREDICTED: protein LHY-like isoform X1 [Citrus sinensis]
            gi|568876654|ref|XP_006491390.1| PREDICTED: protein
            LHY-like isoform X2 [Citrus sinensis]
            gi|568876656|ref|XP_006491391.1| PREDICTED: protein
            LHY-like isoform X3 [Citrus sinensis]
            gi|568876658|ref|XP_006491392.1| PREDICTED: protein
            LHY-like isoform X4 [Citrus sinensis]
          Length = 765

 Score =  418 bits (1075), Expect = e-114
 Identities = 283/687 (41%), Positives = 351/687 (51%), Gaps = 86/687 (12%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYSS E+L++KTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTK AVQ
Sbjct: 1    MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTSSLVGA 1451
            IRSHAQKFFSKLEKEAL KG  +GQ +D                   T  +   S  +GA
Sbjct: 61   IRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPMSQ-IGA 119

Query: 1450 K--------------QTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
            K              Q  ++E     + P G EK     E   +++ SEV    QEA C+
Sbjct: 120  KDGKLRSSVSSLRCNQVLDLEKEPISDRPNGDEKPTYTIES-QKDNCSEVFILHQEAHCS 178

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATD-------------------- 1193
            S+SS +K+ + T +    SCNLREFVPS +KE+ +Q  T                     
Sbjct: 179  SVSSVNKNSMPTPVGLRDSCNLREFVPS-LKEVVNQDETRESYVTVELKANEKFGKPDAK 237

Query: 1192 ------------NCMNEAPKHEKQVNGERTNEVRKPEKLRKFPTDETQPNQSFPRHVPVH 1049
                        N  N  P HEK V+GE+ ++V         PT E Q  Q++PRHV VH
Sbjct: 238  LALQDNGSSKPLNLENACPSHEKSVHGEKRDDVADA-----LPTAEVQATQNYPRHVNVH 292

Query: 1048 IVDGSPRTCVKTPFPDMFPSSILYQ-GGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSM 872
            I+DGS  T  ++P       SI +  G  H NP+LFTNP                     
Sbjct: 293  ILDGSLGTGTQSPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQS-F 351

Query: 871  PNFPPPFIPFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETT 713
            P F PPF  F H+QD YRS L++S  F SL+V  +       A  S A +FWP TN+ET+
Sbjct: 352  PTFHPPFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNMETS 411

Query: 712  VDSP---------------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPT 578
             DSP               P+M  I             AHG+ PLC PFH  F CP A  
Sbjct: 412  ADSPTCPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCAPFHAPFICPPACA 471

Query: 577  TAI-------LPVVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXX 419
            TA+       +P    +   N P +P  +   Q D E+SEA + Q+              
Sbjct: 472  TAVSSMDTAQVPAAKTDKNDNTPPNPALK-DHQPDLEYSEALQAQNSASKSLTVLTSDSE 530

Query: 418  XXXXXXSNGNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASE 239
                      ELK TDHE K +     HDS K K RK VDR          SEVE +A E
Sbjct: 531  ESASAKLK-MELKATDHE-KNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALE 588

Query: 238  KHEKGKDESKEPD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSF 77
            K EKGK+ESKE D      +  NRR R++SN+ +SWKEVS+VGRLAFQALFSREVLPQSF
Sbjct: 589  KQEKGKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEVGRLAFQALFSREVLPQSF 648

Query: 76   S----LNKGQPQNSTEDGKQNDEKDED 8
            S    L     Q++ ED +  ++KD D
Sbjct: 649  SPPHDLKDKMQQDNVEDKQNGNKKDGD 675


>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
          Length = 768

 Score =  412 bits (1059), Expect = e-112
 Identities = 280/691 (40%), Positives = 344/691 (49%), Gaps = 91/691 (13%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYSS EEL+IK RKPYTITKQRERWT++EH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDTYSSGEELVIKARKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTS----- 1466
            IRSHAQKFFSKLEKEALVKG  +GQ LD                   T+  V TS     
Sbjct: 61   IRSHAQKFFSKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTSIGVPTSQVGTK 120

Query: 1465 --------SLVGAKQTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCAS 1310
                    S    KQ  ++E     E P G EK   AK+  D ++ SEV T  QE  C+S
Sbjct: 121  DGKLFTSASSSDCKQALDLEKEPLPEKPNGDEKPENAKDNQD-DNCSEVFTLHQEVHCSS 179

Query: 1309 ISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATDNCM------------------ 1184
            +SSA++S + T +       LREFVPS  + I+     ++ +                  
Sbjct: 180  VSSANRSSVPTPVALRNLNTLREFVPSMKRSITQDETNESYVTIELKGNQKLEKADAKQT 239

Query: 1183 -------------NEAPKHEKQVNGERTNEVRKPEKLRKFPTDETQPNQSFPRHVPVHIV 1043
                         N    HEK + G++T ++         P DE Q  Q++PRHVPV +V
Sbjct: 240  IQDTGTSNGSKLGNHNVLHEKPIQGDKTQDLN-----CALPMDEMQATQNYPRHVPVQVV 294

Query: 1042 DGSPRTCVKTPFPDM-FPSSILY-QGGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMP 869
            DGS  TC +TP  DM F  SI +  G  H + + FTNP                   S P
Sbjct: 295  DGSLGTCTQTPSSDMSFQDSIFHPMGEVHRHHNPFTNP-AASATTEHQNNVPRSVNQSFP 353

Query: 868  NFPPPFIPFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETTV 710
             F PPF P  HNQD Y+S L++S TF SL+V  +       A  S A + WP  NVE + 
Sbjct: 354  AFHPPFTPIRHNQDDYQSFLHMSSTFSSLIVSTLMQNPAAHAAASFAATVWPYANVEASA 413

Query: 709  DSP---------------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTT 575
            DSP               P+M  I             AHG+ PLC P    F C  A T 
Sbjct: 414  DSPASTQGVFPPRQMGSTPSMAAIAAATVAAATAWWAAHGLVPLCAPLPTAFTCNPASTA 473

Query: 574  AI-------LPVVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXXX 416
            A+        P    EG+VN    PP    +QLDPE+SEA + QH               
Sbjct: 474  AVPPTDSGQAPAAKTEGEVNTLQTPP---LQQLDPEYSEAVQAQHSDSKLPIPSSSDSEE 530

Query: 415  XXXXXSNGNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASEK 236
                  N    K TDHE      T  HDS K K RK VDR          S+ E +A EK
Sbjct: 531  SGGAKLNSGP-KATDHE-NAVTATELHDSNKTKGRKQVDRSSCGSNTASSSDRETDALEK 588

Query: 235  HEKGKDESKEPD------ELNNRR-----GRTTSNLNESWKEVSQVGRLAFQALFSREVL 89
             E GK+E KEPD      + +NRR      R+ S +N+SWK VS+ GRLAFQALFSREVL
Sbjct: 589  QEMGKEEPKEPDANHSAADTSNRRCCSSSSRSFSYMNDSWKSVSEEGRLAFQALFSREVL 648

Query: 88   PQSFS-----LNKGQPQNSTEDGKQNDEKDE 11
            PQSFS      N G  +++T D KQN  +++
Sbjct: 649  PQSFSPPHDLKNMGNQKDNTTDDKQNANEND 679


>ref|XP_007051399.1| Homeodomain-like superfamily protein isoform 5 [Theobroma cacao]
            gi|590720702|ref|XP_007051403.1| Homeodomain-like
            superfamily protein isoform 5 [Theobroma cacao]
            gi|590720706|ref|XP_007051404.1| Homeodomain-like
            superfamily protein isoform 5 [Theobroma cacao]
            gi|508703660|gb|EOX95556.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
            gi|508703664|gb|EOX95560.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
            gi|508703665|gb|EOX95561.1| Homeodomain-like superfamily
            protein isoform 5 [Theobroma cacao]
          Length = 707

 Score =  405 bits (1042), Expect = e-110
 Identities = 275/656 (41%), Positives = 342/656 (52%), Gaps = 57/656 (8%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYSS EEL+IKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTSSLVGA 1451
            IRSHAQKFFSKLEKEAL KG  +GQ LD                   T A  +T++ VGA
Sbjct: 61   IRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGA--ATTAQVGA 118

Query: 1450 K----QTP----------NVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
            K    +TP          ++E     E P G EK +  K+  D +S SEV+T   EA C+
Sbjct: 119  KDGKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQD-DSCSEVVTLLHEANCS 177

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGAT--DNCMNEAPKHEKQVNGERT 1139
            S+SS +K+ I TS     SC  REFVPS  + I D G +   N  N    HEK   G++ 
Sbjct: 178  SVSSVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLDNSCTSHEKAAQGQKK 237

Query: 1138 NEVRKPEKLRKFPTDETQPNQSFPRHVPVHIVDGSPRTCVKTPFPDMFPSSILYQGGAHL 959
            ++V    +      DETQ  Q++PRHV VH++DGS  T           ++  +Q  A  
Sbjct: 238  DDVDGGLR-----ADETQATQNYPRHVAVHVLDGSLGTAAS--------ATTEHQNNA-- 282

Query: 958  NPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFIPFVHNQDTYRSLLNVSPTFPSLV 779
                                       + P F PPF     N + YRS L+VS TF SL+
Sbjct: 283  ---------------------PRSTHQAFPTFHPPFTHVCPNPEDYRSFLHVSSTFSSLI 321

Query: 778  VPNV-------APPSLAGSFWPCTNVETTVDSP---------------PNMVEIXXXXXX 665
               +       A  S A +FWP  NV+++ DSP               P+M  I      
Sbjct: 322  ASTLLQNPAAHAAASFAATFWPYANVDSSADSPACSQGGFPSRQMNPAPSMAAIAAATVA 381

Query: 664  XXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAILPVVNK-------EGKVNGPHDPPWEVQ 506
                   AHG+ PLC P H GF C  A   A+ P+ N+       E K N   D   +  
Sbjct: 382  AATAWWAAHGLLPLCAPLHTGFTCALASAAAVPPMDNEQAPATKMERKDNNDQDLSMQ-D 440

Query: 505  EQLDPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSNGNELKPTDHEQKPAPITGFHDST 326
            +QLDPE+SEA + QH                     N   +K  D ++K A +T   D+ 
Sbjct: 441  QQLDPEYSEALQAQHSASKSPTSSSSDSEACGDAKVN-TGVKAAD-DEKAAAVTEPQDAN 498

Query: 325  KVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKDESKEPD------ELNNRRGRTTSN 164
            K K RK VDR          SEVE +  EK+EK K+++K  D      E  NRRGR+ SN
Sbjct: 499  KTKNRKQVDRSSCGSNTPSSSEVETDVLEKYEKDKEDAKGADANHPQVECCNRRGRSCSN 558

Query: 163  LNESWKEVSQVGRLAFQALFSREVLPQSFS-----LNKGQPQNSTEDGKQN-DEKD 14
             ++SWKEVS+ GRLAFQALFSREVLPQSFS      NKGQ ++  ED KQN DEKD
Sbjct: 559  PSDSWKEVSEGGRLAFQALFSREVLPQSFSPPHDGKNKGQQKDKVEDDKQNSDEKD 614


>dbj|BAH09382.1| transcription factor LHY [Populus nigra] gi|219687747|dbj|BAH09384.1|
            PnLHY1 [Populus nigra]
          Length = 768

 Score =  400 bits (1029), Expect = e-109
 Identities = 270/680 (39%), Positives = 342/680 (50%), Gaps = 79/680 (11%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYS+ E+L+IKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDTYSAGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTN-------ASVS 1472
            IRSHAQKFFSKLEKEA+ KG  +GQ L+                   T        A   
Sbjct: 61   IRSHAQKFFSKLEKEAVAKGVPIGQALEIDIPPPRPKRKPSNPYPRKTGVGPPASQAGAK 120

Query: 1471 TSSLVGAKQTPN------VETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCAS 1310
               L+ +  +P+      +E     E P G E+   AKE  D+ + SEV T  QEA C+S
Sbjct: 121  DGKLLTSTSSPHCRKVLDLEKEPRPEKPNGDERPTNAKENQDD-NCSEVFTLLQEAHCSS 179

Query: 1309 ISSASKSYIQTSIVQAKSCNLREFVPSSVKEISD-----------------------QGA 1199
            ++S +K+ +    V  K+ + REFVPS  K   D                       Q  
Sbjct: 180  VASVNKNCVPALEVLKKTSSFREFVPSPKKGNDDACNESFITVEHEANQKLDSSDANQTV 239

Query: 1198 TDNCMNEAPKHEKQVNGERT--NEVRKPEKLRKFPTDETQPNQSFPRHVPVHIVDGSPRT 1025
             DN   +A K E   +       + +  + +   PTDE Q  Q++PRHVPVH++DGS  T
Sbjct: 240  LDNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMQAMQNYPRHVPVHVLDGSLGT 299

Query: 1024 CVKTPFPDMFPSSILYQ-GGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFI 848
            C++TP    F  S+ +  G     P L+++P                   S P FPPPF 
Sbjct: 300  CIETPSDLSFQDSMFHPVGDIPACPILYSHPAGSTTTDHPTNLPRSSMHQSFPFFPPPFT 359

Query: 847  PFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETTVDSP---- 701
            P  HNQD YRS L++S TF S VV  +       A  S A +FWP  NVE++ DSP    
Sbjct: 360  PTHHNQDDYRSFLHISSTFSSPVVSTLLQNPAAHAAASFAATFWPYGNVESSADSPACAQ 419

Query: 700  -----------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAI----- 569
                       P+M  I             AHG+ P+C P H  F CP A  TAI     
Sbjct: 420  EGFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICAPLHTAFACPPASATAIQSADT 479

Query: 568  --LPVVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSN 395
              +P    E K   P +PP + Q Q D E SEA + Q+                     N
Sbjct: 480  DQVPPAKPERKETTPDNPPLQGQIQ-DLEHSEAVQAQNSASKPPTLSSSDSEESGGTKLN 538

Query: 394  GNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKDE 215
                   D     AP     DS K K+RK VDR          SE+E +A EK EKGK+E
Sbjct: 539  TGPKVTDDELNSKAPEV--QDSGKTKSRKQVDRSSCGSNTPSSSEIETDALEKTEKGKEE 596

Query: 214  SKEPD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSFS-----LN 68
             KE D      E N RR R++S++++SWKEVS+ GRLAFQALF+RE+LPQSFS      +
Sbjct: 597  PKEADANHPASESNCRRSRSSSSMSDSWKEVSEEGRLAFQALFTREILPQSFSPPHDLKS 656

Query: 67   KGQPQNSTEDGKQNDEKDED 8
            K   +  TE+ K  DEKD D
Sbjct: 657  KMHQKEDTEEKKNPDEKDGD 676


>ref|XP_006386663.1| hypothetical protein POPTR_0002s18190g [Populus trichocarpa]
            gi|566158675|ref|XP_006386664.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|566158677|ref|XP_002301449.2| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345281|gb|ERP64460.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345282|gb|ERP64461.1| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
            gi|550345283|gb|EEE80722.2| hypothetical protein
            POPTR_0002s18190g [Populus trichocarpa]
          Length = 768

 Score =  399 bits (1026), Expect = e-108
 Identities = 273/681 (40%), Positives = 347/681 (50%), Gaps = 80/681 (11%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYS+ E+L+IKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDTYSAGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTN-------ASVS 1472
            IRSHAQKFFSKLEKEA+ KG  +G+ L+                   T        A   
Sbjct: 61   IRSHAQKFFSKLEKEAVAKGVPIGKALEIDIPPPRPKRKPSNPYPRKTGVGPPASQAGAK 120

Query: 1471 TSSLVGAKQTPN------VETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCAS 1310
               L+ +  +P+      +E     E P G E+   AKE  D+ + SEV T  QEA C+S
Sbjct: 121  DGKLLTSTSSPHCRKVLDLEKEPRPEKPNGDERPTNAKENQDD-NCSEVFTLLQEAHCSS 179

Query: 1309 ISSASKSYIQTSIVQAKSCNLREFVPSSVKEISD-----------------------QGA 1199
            ++S +K+ +    V  K+ + REFVPS  K   D                       Q  
Sbjct: 180  VASVNKNCVPALEVLKKTSSFREFVPSPKKGNHDACNESFITVEHEANQKLDSSDANQTV 239

Query: 1198 TDNCMNEAPKHEKQVNGERT--NEVRKPEKLRKFPTDETQPNQSFPRHVPVHIVDGSPRT 1025
             DN   +A K E   +       + +  + +   PTDE +  Q++PRHVPVH++DGS  T
Sbjct: 240  LDNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMKAMQNYPRHVPVHVLDGSLGT 299

Query: 1024 CVKTPFPDMFPSSILYQ-GGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFI 848
            C++TP    F  S+ +  G     P L+++P                   S P FPPPF 
Sbjct: 300  CMETPSDLSFQDSMFHPVGDIPACPILYSHPTGSTTTDHPTNLPRSSMHQSFPFFPPPFT 359

Query: 847  PFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETTVDSP---- 701
            P  HNQD YRS L++S TF S VV  +       A  S A +FWP  NVE++ DSP    
Sbjct: 360  PTHHNQDDYRSFLHISSTFSSPVVSTLLQNPAAHAAASFAATFWPYGNVESSADSPACAQ 419

Query: 700  -----------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAI----- 569
                       P+M  I             AHG+ P+C P H  F CP A  TAI     
Sbjct: 420  EGFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICAPLHTAFACPPASATAIQSADT 479

Query: 568  --LPVVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSN 395
              +P    E K   P +PP + Q Q D E SEA + Q+                     N
Sbjct: 480  DQVPPAKPERKETTPDNPPLQGQIQ-DLEHSEAVQAQNSASKPPTLSSSDSEESGGTKLN 538

Query: 394  GNELKPTDHE-QKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKD 218
                K TDHE    AP     DS K K+RK VDR          SE+E +A EK+EKGK+
Sbjct: 539  -TAPKVTDHELNSKAPEV--QDSGKTKSRKQVDRSSCGSNTPSSSEIETDALEKNEKGKE 595

Query: 217  ESKEPD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSFS-----L 71
            E KE D      ELN RR R++S++++SWKEVS+ GRLAFQALF+RE LPQSFS      
Sbjct: 596  EPKEADANHPASELNCRRSRSSSSMSDSWKEVSEEGRLAFQALFTRERLPQSFSPPHDLK 655

Query: 70   NKGQPQNSTEDGKQNDEKDED 8
            +K   +  TE+ K  DEKD D
Sbjct: 656  SKMHQKEDTEEKKNPDEKDGD 676


>ref|XP_007051397.1| Homeodomain-like superfamily protein isoform 3 [Theobroma cacao]
            gi|590720695|ref|XP_007051401.1| Homeodomain-like
            superfamily protein isoform 3 [Theobroma cacao]
            gi|590720699|ref|XP_007051402.1| Homeodomain-like
            superfamily protein isoform 3 [Theobroma cacao]
            gi|508703658|gb|EOX95554.1| Homeodomain-like superfamily
            protein isoform 3 [Theobroma cacao]
            gi|508703662|gb|EOX95558.1| Homeodomain-like superfamily
            protein isoform 3 [Theobroma cacao]
            gi|508703663|gb|EOX95559.1| Homeodomain-like superfamily
            protein isoform 3 [Theobroma cacao]
          Length = 700

 Score =  393 bits (1009), Expect = e-106
 Identities = 272/651 (41%), Positives = 338/651 (51%), Gaps = 52/651 (7%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYSS EEL+IKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTSSLVGA 1451
            IRSHAQKFFSKLEKEAL KG  +GQ LD                   T A  +T++ VGA
Sbjct: 61   IRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGA--ATTAQVGA 118

Query: 1450 K----QTP----------NVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
            K    +TP          ++E     E P G EK +  K+  D +S SEV+T   EA C+
Sbjct: 119  KDGKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQD-DSCSEVVTLLHEANCS 177

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGAT--DNCMNEAPKHEKQVNGERT 1139
            S+SS +K+ I TS     SC  REFVPS  + I D G +   N  N    HEK   G++ 
Sbjct: 178  SVSSVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLDNSCTSHEKAAQGQKK 237

Query: 1138 NEVRKPEKLRKFPTDETQPNQSFPRHVPVHIVDGSPRTCVKTPFPDM-FPSSILY-QGGA 965
            ++V    +      DETQ  Q++PRHV VH++DGS  T  + P  DM F  S+ +  G  
Sbjct: 238  DDVDGGLR-----ADETQATQNYPRHVAVHVLDGSLGTGAQNPSLDMPFQDSVFHPMGDV 292

Query: 964  HLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFIPFVHNQDTYRSLLNVSPTFPS 785
            H   +LF NP                                H  +  RS  + +P    
Sbjct: 293  HGQTNLFANPAASATTE-------------------------HQNNAPRS-THQNPAAH- 325

Query: 784  LVVPNVAPPSLAGSFWPCTNVETTVDSP---------------PNMVEIXXXXXXXXXXX 650
                  A  S A +FWP  NV+++ DSP               P+M  I           
Sbjct: 326  ------AAASFAATFWPYANVDSSADSPACSQGGFPSRQMNPAPSMAAIAAATVAAATAW 379

Query: 649  XXAHGMFPLCPPFHPGFPCPTAPTTAILPVVNK-------EGKVNGPHDPPWEVQEQLDP 491
              AHG+ PLC P H GF C  A   A+ P+ N+       E K N   D   +  +QLDP
Sbjct: 380  WAAHGLLPLCAPLHTGFTCALASAAAVPPMDNEQAPATKMERKDNNDQDLSMQ-DQQLDP 438

Query: 490  EFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSNGNELKPTDHEQKPAPITGFHDSTKVKTR 311
            E+SEA + QH                     N   +K  D ++K A +T   D+ K K R
Sbjct: 439  EYSEALQAQHSASKSPTSSSSDSEACGDAKVN-TGVKAAD-DEKAAAVTEPQDANKTKNR 496

Query: 310  KMVDRXXXXXXXXXXSEVEKEASEKHEKGKDESKEPD------ELNNRRGRTTSNLNESW 149
            K VDR          SEVE +  EK+EK K+++K  D      E  NRRGR+ SN ++SW
Sbjct: 497  KQVDRSSCGSNTPSSSEVETDVLEKYEKDKEDAKGADANHPQVECCNRRGRSCSNPSDSW 556

Query: 148  KEVSQVGRLAFQALFSREVLPQSFS-----LNKGQPQNSTEDGKQN-DEKD 14
            KEVS+ GRLAFQALFSREVLPQSFS      NKGQ ++  ED KQN DEKD
Sbjct: 557  KEVSEGGRLAFQALFSREVLPQSFSPPHDGKNKGQQKDKVEDDKQNSDEKD 607


>ref|XP_002515093.1| conserved hypothetical protein [Ricinus communis]
            gi|223545573|gb|EEF47077.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 768

 Score =  388 bits (996), Expect = e-105
 Identities = 270/685 (39%), Positives = 353/685 (51%), Gaps = 84/685 (12%)
 Frame = -1

Query: 1810 METYSSV-EELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAV 1634
            M+TYSS  E+L+IKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAV
Sbjct: 1    MDTYSSGGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAV 60

Query: 1633 QIRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTSSLVG 1454
            QIRSHAQKFFSKLEKEA+ KG  +GQ LD                   T A   T S V 
Sbjct: 61   QIRSHAQKFFSKLEKEAIAKGVPIGQALDIDIPPPRPKRKPSNPYPRKTGAG-PTPSQVA 119

Query: 1453 AK--------------QTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPC 1316
            AK              Q  ++E     E   G EK   A E    ++ SEV T  QEA C
Sbjct: 120  AKDGKLPSLVSFPRCTQVLDLEKEPLPERLNGHEKQTDATE-NQGDNCSEVFTLLQEAHC 178

Query: 1315 ASISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGAT-------------------- 1196
            +S+SSA+K+ + T+     SC+ REFVP S+K++ +Q AT                    
Sbjct: 179  SSVSSANKNSVVTAEALKNSCSFREFVP-SLKKVVNQDATNESYVTIELEGNQKLDKPDA 237

Query: 1195 -----DNCMNEAPKHEKQVNGERTNEVRKPEKLRK-FPTDETQPNQSFPRHVPVHIVDGS 1034
                 DN  ++A K E  +  E+ ++ +K ++     PTDE +  Q +PRHVPVH+++GS
Sbjct: 238  KQTVQDNGSSKASKSESCLFHEKFDQAKKSDEFNSALPTDEMETMQGYPRHVPVHVLEGS 297

Query: 1033 PRTCVKTPFPDMFPSSILY--QGGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFP 860
              TC++TP  D+     ++   G  H +P+L+++P                   S P+F 
Sbjct: 298  LGTCMQTPTSDVSFQEPIFCPTGEVHGHPNLYSHPAASATTEHQNTAPRSSTHQSFPSF- 356

Query: 859  PPFIPFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETTVDSP 701
            PPF    HNQD YRS L++S TF SL+V  +       +  S A +FWP  N+E++ DSP
Sbjct: 357  PPFNSTQHNQDDYRSFLHISSTFSSLIVSTLLQNPAAHSAASFAATFWPYANLESSADSP 416

Query: 700  ---------------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAI- 569
                           P+M  I             AHG+ PLC P H  F CP A  TA+ 
Sbjct: 417  ICPQGGFPSRQMNSAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHAAFTCPPASGTAVA 476

Query: 568  ------LPVVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXXXXXX 407
                  +P    E K+    + P    +Q D E S+  + Q+                  
Sbjct: 477  STGAGQVPAAKTERKLT--VENPLLQNQQFDVEHSKVLQAQNSASKSLEMSLSDSEESGG 534

Query: 406  XXSNGNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEK 227
               N    K TDHE    P     D +K K RK  DR          SEVE +A EK EK
Sbjct: 535  PKKNTGS-KATDHEM-ATPAPEVQDPSKAKARKPADRSSCGSNTSSSSEVETDALEKLEK 592

Query: 226  GKDESK------EPDELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSFS--- 74
            G +E K      EP E + RR R+ S++++SWKEVS+ GRLAFQALFSREVLPQSFS   
Sbjct: 593  GNEELKETDTNPEPTESSCRRSRSNSSISDSWKEVSEEGRLAFQALFSREVLPQSFSPPH 652

Query: 73   --LNKGQPQNSTEDGKQND-EKDED 8
               N+ + ++  E+ KQN  EK+E+
Sbjct: 653  VLKNEARQKDEIEEDKQNTVEKNEN 677


>gb|ABK96054.1| unknown [Populus trichocarpa]
          Length = 764

 Score =  379 bits (972), Expect = e-102
 Identities = 265/678 (39%), Positives = 341/678 (50%), Gaps = 77/678 (11%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            ME +SS E+L+IKTRKPYTITKQRERWT+EEHSRFLEALKLYGRAWQRIEEHIGTKT VQ
Sbjct: 1    MEIFSSGEDLVIKTRKPYTITKQRERWTEEEHSRFLEALKLYGRAWQRIEEHIGTKTVVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNAS--------- 1478
            IRSHAQKFFSKLEKEA+VKG  +GQ LD                                
Sbjct: 61   IRSHAQKFFSKLEKEAVVKGVPIGQALDIDIPPPRPKRKPSNPYPRKIGVGPPASQVGAK 120

Query: 1477 ----VSTSSLVGAKQTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCAS 1310
                ++++S    KQ   +E     E   G E+   AKE  D ++ SEV +  QE  C+S
Sbjct: 121  DGKLLTSASFPCCKQVLGLEKEPLPEKLNGDERPTNAKENQD-DNCSEVFSLLQEPHCSS 179

Query: 1309 ISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATDNCMNEAPKHEKQVNGE----- 1145
            + S +K+ + T  +  K+   REFV S  +   D     +   E   ++K  N +     
Sbjct: 180  VPSINKNSVPTLDILKKASPFREFVSSPKEGNHDASNQSSVTVELGANQKLDNSDVKQDN 239

Query: 1144 RTNEVRKPEKLRKFP-----------------TDETQPNQSFPRHVPVHIVDGSPRTCVK 1016
             T+E  K E    F                  TD  Q  Q++PRHVPVH++DGS  TC++
Sbjct: 240  STSEFSKSENFCSFSEKLFQQKKSDDFIGALRTDGMQAMQNYPRHVPVHVLDGSLGTCMQ 299

Query: 1015 TPFPDM-FPSSILYQ-GGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFIPF 842
            TP  D  F  S+ +  G     P+L+++P                   S P+FPPPF P 
Sbjct: 300  TPPSDFSFQESMFHPIGEIPACPNLYSHPAASKTTDHPNISPRSSMHQSFPSFPPPFTPT 359

Query: 841  VHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETTVDSP------ 701
             HNQD YRS L++S TF SLVV ++       A  S A +FWP  NVE++ DSP      
Sbjct: 360  HHNQDDYRSFLHISSTFSSLVVSSLLQNPAAHAAASFASTFWPYGNVESSADSPACAQGG 419

Query: 700  ---------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAILPV---- 560
                     P+M  I             AHG+ P+C P H  F CP A  TAI  V    
Sbjct: 420  FQSRQLNSAPSMAAIVAATVAAATAWWTAHGLLPMCAPLHTSFACPPASATAIQSVDTGQ 479

Query: 559  --VNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSN-GN 389
                K  +     +P  + Q Q  PE +EA + Q+                     N G 
Sbjct: 480  VSATKTERKETAENPSLQGQIQ-GPEHTEALQAQNSASKSPKITSSDSEESGGPKLNTGP 538

Query: 388  ELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKDESK 209
            E+   DHE    P     DS+K K+RK++DR          SE+E +A EK EKG +E K
Sbjct: 539  EV--IDHELTTKP-HEVQDSSKTKSRKLIDRSSCGSNTPSSSEIETDALEKAEKGTEEPK 595

Query: 208  EPD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSFS----LNKGQ 59
            E D      E ++R  R++S++N+SWKEVS+ GRLAFQALF+REVLPQSFS    L    
Sbjct: 596  EDDANHPASESSSRHSRSSSSMNDSWKEVSEEGRLAFQALFAREVLPQSFSPPHDLKSKM 655

Query: 58   PQNSTEDGKQN-DEKDED 8
             QN     K++ DEKD D
Sbjct: 656  HQNEDAGEKKDADEKDGD 673


>ref|XP_007218929.1| hypothetical protein PRUPE_ppa001765mg [Prunus persica]
            gi|462415391|gb|EMJ20128.1| hypothetical protein
            PRUPE_ppa001765mg [Prunus persica]
          Length = 768

 Score =  378 bits (970), Expect = e-102
 Identities = 266/688 (38%), Positives = 338/688 (49%), Gaps = 87/688 (12%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+T SS E+L+IK RKPYTITKQRERWT+EEH+RFL+ALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDTQSSGEDLVIKARKPYTITKQRERWTEEEHNRFLDALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNAS--------- 1478
            IRSHAQKFFSKLEKEA  KG   GQ++D                   + ++         
Sbjct: 61   IRSHAQKFFSKLEKEAHNKGVLAGQSIDIDIPPPRPKRKPSNPYPRKSCSAAPTWATSHV 120

Query: 1477 -------VSTSSLVGAKQTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAP 1319
                   +S++S    KQ  ++E     E PT  E     KE  DE + SEVLT   E  
Sbjct: 121  AAKDGKLLSSTSSSHCKQVLDLEKEPLDERPTKEENPRNGKENQDE-NCSEVLTMLLEDH 179

Query: 1318 CASISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATDNCM------------NEA 1175
            C+S+SSA+K+ I T +    +C  REFVPS  + IS     D+ +            N+A
Sbjct: 180  CSSVSSANKNSIPTQVALRNACTFREFVPSPKEVISQDVTNDSYVTTELNGNQNLKKNDA 239

Query: 1174 PK-------------------HEKQVNGERTNEVRKPEKLRKFPTDETQPNQSFPRHVPV 1052
             K                   H+K V GE+ +++         PTD  Q  Q++PR+VPV
Sbjct: 240  KKIVQDNGTSGASESENSNAFHKKLVQGEKADDLNCA-----LPTDGMQGTQTYPRNVPV 294

Query: 1051 HIVDGSPRTCVK-TPFPDMFPSSILY-QGGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXX 878
            H++DGS   C + TP    F  +  +  G  H  P+LF NP                   
Sbjct: 295  HVLDGSLGACNQITPADMSFADTAFHPMGKVHGQPNLFANPTASTTTEHESNTSRSSVHQ 354

Query: 877  SMPNFPPPFIPFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVE 719
            S P F PPF P  H Q  Y+S L++S TF SL+V ++       A  S A +FWP  N E
Sbjct: 355  SFPAFHPPFTPLHHGQKDYQSFLHMSSTFSSLIVSSLLQNPAAHAAASFAATFWPYANAE 414

Query: 718  TTVDSP---------------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTA 584
             T DSP               P+M  I             +HG+ PLC P    F CP  
Sbjct: 415  NTEDSPACPPGGFPSRQMNSPPSMAAIAAATVAAASAWWASHGLLPLCAPVQTAFSCPPV 474

Query: 583  PTTAI-------LPVVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXX 425
              T +        P  N E   N    P  + Q Q+DPE  EA + QH            
Sbjct: 475  SMTGVPSMDTGEAPAANIERGENSLQIPSLQDQ-QVDPEHLEAVEAQHPASKSPSMSSSH 533

Query: 424  XXXXXXXXSNGNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEA 245
                         LK    E+  A     +DS   K+RK VDR          SEVE +A
Sbjct: 534  SDNGGAEP--NTVLKAAADEKVVASTDEVNDSNNAKSRKQVDRSSCGSNTPSSSEVETDA 591

Query: 244  SEKHEKGKDESKEPDELNN-------RRGRTTSNLNESWKEVSQVGRLAFQALFSREVLP 86
             EK EKGK+E KEPD LN+       RR R+  N+++ WKEVS+ GR+AFQALFSREVLP
Sbjct: 592  LEKQEKGKEELKEPD-LNHPASDSTYRRSRSIINISDPWKEVSEEGRMAFQALFSREVLP 650

Query: 85   QSFS-LNKGQPQNSTEDGKQN-DEKDED 8
            QSFS   K +   +T +GK+N +EKDED
Sbjct: 651  QSFSPPPKDKEHQTTTEGKENAEEKDED 678


>dbj|BAH09383.1| transcription factor LHY [Populus nigra] gi|219687749|dbj|BAH09385.1|
            PnLHY2 [Populus nigra]
          Length = 764

 Score =  377 bits (969), Expect = e-102
 Identities = 263/677 (38%), Positives = 338/677 (49%), Gaps = 76/677 (11%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            ME +SS E+L+IKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKT VQ
Sbjct: 1    MEIFSSGEDLVIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTVVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNAS--------- 1478
            IRSHAQKFFSKLEKEA+VKG  +GQ LD                                
Sbjct: 61   IRSHAQKFFSKLEKEAIVKGVPIGQALDIDIPPPRPKRKPSNPYPRKIGVGPPASQVGAK 120

Query: 1477 ----VSTSSLVGAKQTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCAS 1310
                ++++S    KQ   +E     E   G E+   AKE  D ++ SEV +  QE  C+S
Sbjct: 121  DGKLLTSASFPCCKQVLGLEKEPLPEKLNGNERPTDAKENQD-DNCSEVFSLLQEPHCSS 179

Query: 1309 ISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATDNCMNEAPKHEKQVNGE----- 1145
            + S +K+ + T  +  K+   REFV S  +   D     +   +   ++K  N +     
Sbjct: 180  VPSVNKNSVPTLDILKKASPFREFVSSPKEGNHDASNQSSVTVDLGANQKLDNSDVKQDN 239

Query: 1144 RTNEVRKPEKLRKFP-----------------TDETQPNQSFPRHVPVHIVDGSPRTCVK 1016
             T+E  K E    F                  TD  Q  Q++PRHVPVH++DGS  TC++
Sbjct: 240  STSEFSKSENFCSFSEKLFQQKKSDDFIGALRTDGMQAMQNYPRHVPVHVLDGSLGTCMQ 299

Query: 1015 TPFPDM-FPSSILYQ-GGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFIPF 842
            TP  D  F  SI +  G     P+L+++P                   S P+FPPPF P 
Sbjct: 300  TPPSDFSFQESIFHPIGEIPACPNLYSHPAASKTTDHPNISPRSSMHQSFPSFPPPFTPT 359

Query: 841  VHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETTVDSP------ 701
             HNQD YRS L++S TF SLVV ++       A  S A +FWP  NVE++ DSP      
Sbjct: 360  HHNQDDYRSFLHMSSTFSSLVVSSLLQNPAAHAAASFASTFWPYGNVESSADSPACAQGG 419

Query: 700  ---------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAILPV---- 560
                     P+M  I             AHG+ P+C P H  F CP A  TAI  V    
Sbjct: 420  FQSRQLNSAPSMAAIVAATVAAATAWWTAHGLLPMCAPLHTSFACPPASATAIQSVDTGQ 479

Query: 559  --VNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSNGNE 386
                K  +     +P  + Q Q D E +EA + Q+                     N   
Sbjct: 480  VSATKTERKETAENPSLQGQIQ-DQEHTEALQAQNSASKSPKITSSDSEESGGPQLN-TR 537

Query: 385  LKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKDESKE 206
             +  DHE    P     DS+K K+RK++DR          SE+E +A EK EKG +E KE
Sbjct: 538  PEVIDHELTTKP-HEVQDSSKTKSRKLIDRSSCGSNTPSSSEIETDALEKAEKGTEEPKE 596

Query: 205  PD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSFS----LNKGQP 56
             D      E ++R  R++S++N+SWKEVS+ GRLAFQ LF+REVLPQSFS    L     
Sbjct: 597  DDANHPASESSSRHSRSSSSMNDSWKEVSEEGRLAFQTLFAREVLPQSFSPPHDLKSKMH 656

Query: 55   QNSTEDGKQN-DEKDED 8
            QN     K++ DEKD D
Sbjct: 657  QNEDAGEKKDADEKDGD 673


>gb|AAQ73524.1| circadian clock associated1 [Mesembryanthemum crystallinum]
          Length = 739

 Score =  377 bits (967), Expect = e-101
 Identities = 255/663 (38%), Positives = 333/663 (50%), Gaps = 61/663 (9%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            ME YSS EEL+IKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MEAYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTSSLV-- 1457
            IRSHAQKFFSKLEKEALVKG  + Q +D                   T A+ S S+ +  
Sbjct: 61   IRSHAQKFFSKLEKEALVKGVPIQQAIDIEIPPPRPKRKPSNPYPRKTGAAGSPSTQIKV 120

Query: 1456 --------GAKQTPN----VETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
                    G+  T N    +E   P EN TG +    AKE       SE  T  QEAP  
Sbjct: 121  KDGNKVPPGSSHTANQLLDLEKEPPPENTTGDDGKQNAKETCGAYKCSETFTLFQEAPST 180

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATDNCMNEAPKHEKQVNGERTNE 1133
              +S +++   T+    KSC + + VP  +         D   ++ P  + +   ++ ++
Sbjct: 181  LTASGNENSAITTGATRKSCKVDDPVPKKL-------LVDIDGSDCPAADGRQRNQKLDK 233

Query: 1132 VRKPEKLRKFPTDETQPNQSFPRHVPVHIVDGSPRTCVKTPFPDM-FPSSILYQGGAHLN 956
                E  +    +E    ++FPRH PVHI+DGS   C +    D+ +  S  ++ G    
Sbjct: 234  TDTVETAQNDTENEMHAVKNFPRHTPVHILDGSLGACSQALSSDVSYQESAFHRMGIPGY 293

Query: 955  PSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFIPFVHNQDTYRSLLNVSPTFPSLVV 776
            P++F+NP                      +F PPF PF +  + Y S + +S TF SL+V
Sbjct: 294  PAIFSNPAVSAAVESQNSTSRTTNQQMFTSFHPPFTPFPNTPEDYSSFVQMSATFSSLIV 353

Query: 775  PNV-------APPSLAGSFWPCTNVETTVDSP---------------PNMVEIXXXXXXX 662
              +       A  S A SFWPC+N+E + + P               P+M  I       
Sbjct: 354  SALLQNPAAHAAASFAASFWPCSNMENSANCPAGLSGGFPPRPMNTAPSMAAIAGATVAA 413

Query: 661  XXXXXXAHGMFPLCPPFHPGFPCPTAPTTAILPVV------NKEGKVNGPHDPPWEVQEQ 500
                  AHG+ PLC P H GF CP A   A L  V      NKE + N   +P  +VQ Q
Sbjct: 414  ATAWWAAHGLLPLCAPVHSGFNCPPASANAPLTNVAQSQATNKEREENNFQNPGSQVQ-Q 472

Query: 499  LDPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSNGNELKPTDHEQKPAPITGFHDSTKV 320
             D E SEA +PQH                        E+   D+E K   +T   DS+K 
Sbjct: 473  PDQELSEALQPQHSASKPSATSSSDSGDSAGAKME-IEIPTNDNEIKVPAMTEQKDSSKG 531

Query: 319  KTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKDESKEPD------ELNNRRGRTTS-NL 161
            K++K+VDR          S+VE +A +K++KGK+E  EPD      ELNNRR R  S NL
Sbjct: 532  KSKKLVDRSSCGSNTPSGSDVETDALQKNDKGKEEPLEPDISQIAGELNNRRNRIASNNL 591

Query: 160  NESWKEVSQVGRLAFQALFSREVLPQSFS-----------LNKGQPQNSTEDGKQNDEKD 14
            N+SWKEVS+ GRLAFQALFSRE LPQSFS           +N G  +N     + N++  
Sbjct: 592  NDSWKEVSEGGRLAFQALFSRERLPQSFSPPQDVSIMDQVMNNGVERNGQNATETNEDAS 651

Query: 13   EDD 5
            + D
Sbjct: 652  QLD 654


>ref|XP_006491393.1| PREDICTED: protein LHY-like isoform X5 [Citrus sinensis]
          Length = 659

 Score =  375 bits (964), Expect = e-101
 Identities = 257/642 (40%), Positives = 320/642 (49%), Gaps = 82/642 (12%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYSS E+L++KTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTK AVQ
Sbjct: 1    MDTYSSGEDLVLKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKKAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTSSLVGA 1451
            IRSHAQKFFSKLEKEAL KG  +GQ +D                   T  +   S  +GA
Sbjct: 61   IRSHAQKFFSKLEKEALSKGVPIGQAIDIDIPPPRPKRKPRNPYPRKTCTNAPMSQ-IGA 119

Query: 1450 K--------------QTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
            K              Q  ++E     + P G EK     E   +++ SEV    QEA C+
Sbjct: 120  KDGKLRSSVSSLRCNQVLDLEKEPISDRPNGDEKPTYTIES-QKDNCSEVFILHQEAHCS 178

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATD-------------------- 1193
            S+SS +K+ + T +    SCNLREFVPS +KE+ +Q  T                     
Sbjct: 179  SVSSVNKNSMPTPVGLRDSCNLREFVPS-LKEVVNQDETRESYVTVELKANEKFGKPDAK 237

Query: 1192 ------------NCMNEAPKHEKQVNGERTNEVRKPEKLRKFPTDETQPNQSFPRHVPVH 1049
                        N  N  P HEK V+GE+ ++V         PT E Q  Q++PRHV VH
Sbjct: 238  LALQDNGSSKPLNLENACPSHEKSVHGEKRDDVADA-----LPTAEVQATQNYPRHVNVH 292

Query: 1048 IVDGSPRTCVKTPFPDMFPSSILYQ-GGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSM 872
            I+DGS  T  ++P       SI +  G  H NP+LFTNP                     
Sbjct: 293  ILDGSLGTGTQSPSDMPMQESIFHPIGEVHGNPNLFTNPAASATTENESNVPKSTHQS-F 351

Query: 871  PNFPPPFIPFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETT 713
            P F PPF  F H+QD YRS L++S  F SL+V  +       A  S A +FWP TN+ET+
Sbjct: 352  PTFHPPFTQFRHDQDDYRSFLHISSAFSSLIVSTLLQNPAAHAAASFAATFWPYTNMETS 411

Query: 712  VDSP---------------PNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPT 578
             DSP               P+M  I             AHG+ PLC PFH  F CP A  
Sbjct: 412  ADSPTCPQGGFLSRQMSSPPSMAAIAAATVAAATAWWAAHGLLPLCAPFHAPFICPPACA 471

Query: 577  TAI-------LPVVNKEGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXX 419
            TA+       +P    +   N P +P  +   Q D E+SEA + Q+              
Sbjct: 472  TAVSSMDTAQVPAAKTDKNDNTPPNPALK-DHQPDLEYSEALQAQNSASKSLTVLTSDSE 530

Query: 418  XXXXXXSNGNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASE 239
                      ELK TDHE K +     HDS K K RK VDR          SEVE +A E
Sbjct: 531  ESASAKLK-MELKATDHE-KNSEENELHDSNKTKNRKQVDRSSCGSNTPSSSEVETDALE 588

Query: 238  KHEKGKDESKEPD------ELNNRRGRTTSNLNESWKEVSQV 131
            K EKGK+ESKE D      +  NRR R++SN+ +SWKEVS+V
Sbjct: 589  KQEKGKEESKEIDPSLPATDPGNRRSRSSSNITDSWKEVSEV 630


>ref|XP_004494878.1| PREDICTED: protein LHY-like isoform X1 [Cicer arietinum]
            gi|502114154|ref|XP_004494879.1| PREDICTED: protein
            LHY-like isoform X2 [Cicer arietinum]
            gi|502114158|ref|XP_004494880.1| PREDICTED: protein
            LHY-like isoform X3 [Cicer arietinum]
          Length = 756

 Score =  373 bits (957), Expect = e-100
 Identities = 267/683 (39%), Positives = 346/683 (50%), Gaps = 80/683 (11%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            ME YSS EE+++KTRKPYTITKQRERWT++EH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 2    MEAYSSGEEVVVKTRKPYTITKQRERWTEDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 61

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVST------ 1469
            IRSHAQKFFSKLEKEALVKGA++GQ+L+                   TN    T      
Sbjct: 62   IRSHAQKFFSKLEKEALVKGAAIGQSLNIDIPPPRPKRKPSNPYPRKTNVGAPTLHSGAK 121

Query: 1468 --------SSLVGAKQTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
                    +SL G K+  + E  S  E  T  E+    KE  ++E+ S+V T  QEAPC 
Sbjct: 122  YGKPLTAFASLHG-KEAMDFEKESLPEMHTDDERPTTVKE-NNDENCSKVCTILQEAPCL 179

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGATDNCMNEAPKHEKQV------- 1154
            S+SSA+KS I  S+ Q KS   REF+P  VKE+  Q  T+     A + E Q+       
Sbjct: 180  SVSSANKSSISMSVPQTKSFTFREFIP-LVKEVIPQDKTNESF-PATETENQMLEIGDGK 237

Query: 1153 NGERTNEVRKPEKLRK------------------FPTDETQPNQSFPRHVPVHIVDGSPR 1028
              ++T+   K  KL                       DE Q NQ++PRH+ VH+VDG+  
Sbjct: 238  QTQKTDGTCKTSKLENTCSPKSVQTEKTDGLTYASTVDEMQGNQNYPRHITVHVVDGNLG 297

Query: 1027 TCVKTPFPDMFPSSILYQ--GGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPP 854
            T  +TP  DM     ++Q  GG +  P+LFTN                       +FPP 
Sbjct: 298  TSTQTPSQDMLIQDSIFQPIGGINGQPNLFTNSAASNTSESQNNTARSSIH---QSFPPC 354

Query: 853  FIPFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETT------ 713
             +   HN+D Y+S LN+  TF SL+V  +       A  S A +FWP  NV+T+      
Sbjct: 355  PLFAQHNEDDYQSFLNMPSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVDTSANSHAC 414

Query: 712  ---------VDSPPNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAILPV 560
                     + SPP++  I             AHG+ PLC P H  F CP A  TA+ P 
Sbjct: 415  SQGGFPSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPLCTPLHTAFACPPASATAVQPA 474

Query: 559  VNKEGKVNGPH-----DPPWEVQEQLDPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSN 395
               E   N          P    + L  E +EA + QH                     N
Sbjct: 475  NIGEAPPNTEQGDITLQNPSLKDQMLGVEETEALQAQHSASKSPAVSSSESEETGDAKLN 534

Query: 394  GNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKDE 215
             +    TDH+    PI+   DS K++ RK VDR          SE E +A EK EK K++
Sbjct: 535  TSSKATTDHDIS-QPISENPDSNKMEGRKQVDRSSCGSNTTSSSE-ETDALEKGEKEKED 592

Query: 214  SKEPD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSFS-----LN 68
             K PD      + ++RR R+ SN  +SWKEVS+ GRLAF+ALFSR+VLPQSFS     +N
Sbjct: 593  PKPPDADHLATDPSSRRYRSISNFIDSWKEVSEEGRLAFRALFSRQVLPQSFSPPHDLIN 652

Query: 67   KG-QPQNSTEDGKQNDEKDEDDT 2
            K  Q  N T++ ++ D KD  D+
Sbjct: 653  KDHQMGNMTDNMQKTDYKDHLDS 675


>ref|NP_001236400.1| MYB transcription factor MYB114 [Glycine max]
            gi|571443651|ref|XP_006576273.1| PREDICTED: MYB
            transcription factor MYB114 isoform X1 [Glycine max]
            gi|571443653|ref|XP_006576274.1| PREDICTED: MYB
            transcription factor MYB114 isoform X2 [Glycine max]
            gi|158999370|gb|ABW87009.1| late elongated hypocotyl and
            circadian clock associated-1-like protein 2 [Glycine max]
          Length = 748

 Score =  368 bits (945), Expect = 5e-99
 Identities = 269/681 (39%), Positives = 339/681 (49%), Gaps = 80/681 (11%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+  SS EE++IKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDADSSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVST------ 1469
            IRSHAQKFF+KLEKEA VKG  +GQ LD                   TN    T      
Sbjct: 61   IRSHAQKFFTKLEKEAFVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTNVGAPTLHSEAK 120

Query: 1468 --SSLVG-----AKQTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCAS 1310
               SL+       KQ  ++E   PL      +      +   + S   V T  QEAPC+S
Sbjct: 121  HGKSLISIASSHGKQALDLE-KEPLPEKHNVDLRPTTVKENKDGSCLNVFTIIQEAPCSS 179

Query: 1309 ISSASKSYIQTSIVQAKSCNLREFVPSSVKEI------SDQGATDNCMNEAPKHEKQVNG 1148
            +SSA+K+    S+    SC LREF+P SVKE+      ++   TD   N+  + +   + 
Sbjct: 180  VSSANKNSTSISVPLRNSCALREFIP-SVKEVITRDETNESFVTDELENQKLEIDDGKHT 238

Query: 1147 ERTNEVRKPEKLRK------------------FPTDETQPNQSFPRHVPVHIVDGSPRTC 1022
            ++TN+  +  KL                       D    NQ++PRHVPVH+VDG+  T 
Sbjct: 239  QKTNDTCEVSKLENSGASELVQTEKTDGRNCALTIDGVPGNQNYPRHVPVHVVDGNLGTS 298

Query: 1021 VKTPFPDMFPSSILYQ--GGAHLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFI 848
             +   PDM     ++Q  GG +  P+L TN                    S P  PP   
Sbjct: 299  TQNLSPDMVFQDSIFQPKGGVNRQPNLVTNSATSHISECQNNAARSSIHQSFPPSPP--- 355

Query: 847  PFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPCTNVETTVD------ 707
                 QD Y S L++S TF SL+V  +       A  S A +FWP  N ET+ D      
Sbjct: 356  ---FAQDDYHSFLHMSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANAETSADSPVCTP 412

Query: 706  --------SPPNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFPCPTAPTTAI------ 569
                    SPP++  I             AHG+ PLC P H  F CP A  T +      
Sbjct: 413  DFPSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPLCGPLHTAFACPPASATTVPSMIID 472

Query: 568  -LPVVNKEGKVNGPHDPPWEVQEQL-DPEFSEAPKPQHXXXXXXXXXXXXXXXXXXXXSN 395
              P   + G++  P +PP  +Q+Q+ DPE SEA   QH                     +
Sbjct: 473  ESPQKTERGEIK-PQNPP--LQDQIPDPEHSEA---QHSAPKSPAVSSSKSEDRGDANLD 526

Query: 394  GNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVEKEASEKHEKGKDE 215
             +  K T+HE   A I+   DS K+K RK VDR          SE E E  EK EK K+E
Sbjct: 527  TSP-KATNHEMNQA-ISENPDSNKMKGRKPVDRSSCGSNTTSSSE-ETELLEKDEKEKEE 583

Query: 214  SKEPD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALFSREVLPQSFS-----LN 68
             K PD      EL+NRR R+ SNL +SWKEVS+ GRLAFQALFSREVLPQSFS     +N
Sbjct: 584  PKTPDANVLDTELSNRRSRSISNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPTHHLIN 643

Query: 67   KGQPQNSTEDGKQN-DEKDED 8
            K    +S +D + N D KDED
Sbjct: 644  KDNQIDSIKDNELNTDYKDED 664


>ref|XP_007051396.1| Homeodomain-like superfamily protein isoform 2 [Theobroma cacao]
            gi|590720685|ref|XP_007051398.1| Homeodomain-like
            superfamily protein isoform 2 [Theobroma cacao]
            gi|590720692|ref|XP_007051400.1| Homeodomain-like
            superfamily protein isoform 2 [Theobroma cacao]
            gi|508703657|gb|EOX95553.1| Homeodomain-like superfamily
            protein isoform 2 [Theobroma cacao]
            gi|508703659|gb|EOX95555.1| Homeodomain-like superfamily
            protein isoform 2 [Theobroma cacao]
            gi|508703661|gb|EOX95557.1| Homeodomain-like superfamily
            protein isoform 2 [Theobroma cacao]
          Length = 668

 Score =  367 bits (941), Expect = 2e-98
 Identities = 259/636 (40%), Positives = 322/636 (50%), Gaps = 37/636 (5%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+TYSS EEL+IKTRKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVSTSSLVGA 1451
            IRSHAQKFFSKLEKEAL KG  +GQ LD                   T A  +T++ VGA
Sbjct: 61   IRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTGA--ATTAQVGA 118

Query: 1450 K----QTP----------NVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAPCA 1313
            K    +TP          ++E     E P G EK +  K+  D +S SEV+T   EA C+
Sbjct: 119  KDGKSETPLSSLRCKQVLDLEKEPLPERPNGDEKPINLKDNQD-DSCSEVVTLLHEANCS 177

Query: 1312 SISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQGAT--DNCMNEAPKHEKQVNGERT 1139
            S+SS +K+ I TS     SC  REFVPS  + I D G +   N  N    HEK   G++ 
Sbjct: 178  SVSSVNKNSIPTSAALRNSCTFREFVPSLKETIQDNGTSKASNLDNSCTSHEKAAQGQKK 237

Query: 1138 NEVRKPEKLRKFPTDETQPNQSFPRHVPVHIVDGSPRTCVK--TPFPDMFPSSILYQGGA 965
            ++V    +      DETQ  Q++PRHV VH++DGS  T     T   +  P S       
Sbjct: 238  DDVDGGLR-----ADETQATQNYPRHVAVHVLDGSLGTAASATTEHQNNAPRS------T 286

Query: 964  HLNPSLFTNPXXXXXXXXXXXXXXXXXXXSMPNFPPPFIPFVHNQDTYRSLLNVSPTFPS 785
            H NP+                           +F   F P+ +   +  S       FPS
Sbjct: 287  HQNPAAHA----------------------AASFAATFWPYANVDSSADSPACSQGGFPS 324

Query: 784  LVVPNVAPPSLAGSFWPCTNVETTVDSPPNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHP 605
                                    ++  P+M  I             AHG+ PLC P H 
Sbjct: 325  ----------------------RQMNPAPSMAAIAAATVAAATAWWAAHGLLPLCAPLHT 362

Query: 604  GFPCPTAPTTAILPVVNK-------EGKVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXX 446
            GF C  A   A+ P+ N+       E K N   D   +  +QLDPE+SEA + QH     
Sbjct: 363  GFTCALASAAAVPPMDNEQAPATKMERKDNNDQDLSMQ-DQQLDPEYSEALQAQHSASKS 421

Query: 445  XXXXXXXXXXXXXXXSNGNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXX 266
                            N   +K  D ++K A +T   D+ K K RK VDR          
Sbjct: 422  PTSSSSDSEACGDAKVN-TGVKAAD-DEKAAAVTEPQDANKTKNRKQVDRSSCGSNTPSS 479

Query: 265  SEVEKEASEKHEKGKDESKEPD------ELNNRRGRTTSNLNESWKEVSQVGRLAFQALF 104
            SEVE +  EK+EK K+++K  D      E  NRRGR+ SN ++SWKEVS+ GRLAFQALF
Sbjct: 480  SEVETDVLEKYEKDKEDAKGADANHPQVECCNRRGRSCSNPSDSWKEVSEGGRLAFQALF 539

Query: 103  SREVLPQSFS-----LNKGQPQNSTEDGKQN-DEKD 14
            SREVLPQSFS      NKGQ ++  ED KQN DEKD
Sbjct: 540  SREVLPQSFSPPHDGKNKGQQKDKVEDDKQNSDEKD 575


>ref|XP_004306608.1| PREDICTED: protein CCA1-like [Fragaria vesca subsp. vesca]
          Length = 778

 Score =  365 bits (938), Expect = 3e-98
 Identities = 265/699 (37%), Positives = 343/699 (49%), Gaps = 100/699 (14%)
 Frame = -1

Query: 1810 METYSSVEELIIKTRKPYTITKQRERWTDEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQ 1631
            M+T+S+ E+LIIK RKPYTITKQRERWT+EEH+RFLEALKLYGRAWQRIEEHIGTKTAVQ
Sbjct: 1    MDTFSAGEDLIIKARKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ 60

Query: 1630 IRSHAQKFFSKLEKEALVKGASLGQTLDXXXXXXXXXXXXXXXXXXXTNASVST--SSLV 1457
            IRSHAQKFFSKLEKEA+ KG  +GQ++D                   ++ +  T  +S V
Sbjct: 61   IRSHAQKFFSKLEKEAVSKGVPVGQSIDIDIPPPRPKRKPSNPYPRKSSEAAPTWSTSHV 120

Query: 1456 GA--------------KQTPNVETNSPLENPTGTEKFMRAKELLDEESASEVLTFSQEAP 1319
            GA              KQ  ++E     E  +G EK    KE  D ++ SEV T   E+ 
Sbjct: 121  GAKDGNLVSSASSSHCKQAVDLEKGQLDERSSGGEKPSYGKENKD-KNCSEVFTILSESH 179

Query: 1318 CASISSASKSYIQTSIVQAKSCNLREFVPSSVKEISDQG--------------------- 1202
            C+S+SS  KS I T +    +C  REFVP   K I   G                     
Sbjct: 180  CSSVSSEIKSSIHTQVALRTACTFREFVPPVKKVIPRDGNESYVTIELKGNEILKKTDTK 239

Query: 1201 --ATDNCMNEAPKHE-----KQVNGERTNEVRKPEKLRKFPTDETQPNQSFPRHVPVHIV 1043
                DN  +EA K E     K V GE+ +++         PTD  Q   + PR+VP+ I+
Sbjct: 240  KIVQDNATSEASKLENTNALKLVQGEKADDLN-----CSLPTDGMQSTLTCPRNVPIQIL 294

Query: 1042 DGSPRTCVKTPFPDM---FPSSILY-QGGAHLNPSLFTNP-----XXXXXXXXXXXXXXX 890
            DGS   C +T  P +   F  S+ +  G  H+ P+LFTNP                    
Sbjct: 295  DGSGGECNRTTTPALSLSFQDSVFHPMGKIHVQPNLFTNPAASTTTTTTTTEHDSNVSRS 354

Query: 889  XXXXSMPNFPPPFIPFVHNQDTYRSLLNVSPTFPSLVVPNV-------APPSLAGSFWPC 731
                S+P  PPPF PF HNQ+ Y S  ++S TF SL+V ++       A  S A +FWP 
Sbjct: 355  CIDQSIPAIPPPFTPFHHNQEDYHS--SLSSTFSSLIVSSLLQNPAAHAAASFAATFWPY 412

Query: 730  TNVE---------------TTVDSPPNMVEIXXXXXXXXXXXXXAHGMFPLCPPFHPGFP 596
            TN+E               + ++SPPNM  I             AHGM PLC P    F 
Sbjct: 413  TNLENKEGSPACSAGSFPSSLMNSPPNMAAIAAATVAAATAWWAAHGMLPLCAPLQTSFS 472

Query: 595  CPTAPTTAILPVVNKEG------KVNGPHDPPWEVQEQLDPEFSEAPKPQHXXXXXXXXX 434
            CP  P T +  + N +       K  G    P    +Q +PE SEA + QH         
Sbjct: 473  CP-VPMTGVASMDNDQAHAAEAEKGQGTIQGPSLQDQQQEPEHSEAVQAQHSPSKSPTIS 531

Query: 433  XXXXXXXXXXXSNGNELKPTDHEQKPAPITGFHDSTKVKTRKMVDRXXXXXXXXXXSEVE 254
                         G++    D  +K    T   D  K K++K VDR          SEVE
Sbjct: 532  SSDSENGGAKPEIGSK---ADDNEKDIASTEVQDLNKAKSKKQVDRSSCGSNTTSCSEVE 588

Query: 253  KEASEKHEKGKDESKEPD-----ELNNRRGRTTSN---------LNESWKEVSQVGRLAF 116
             +  EK EKG++E K+PD     E + RR R+ +N         +N+SWKEVS+ GR+AF
Sbjct: 589  TDVLEKQEKGEEELKQPDLNPASESSYRRTRSITNMSDSWKDKHMNDSWKEVSEEGRMAF 648

Query: 115  QALFSREVLPQSFS-----LNKGQPQNSTEDGKQNDEKD 14
            QALFSREVLPQSFS      +KG  Q++ E  + + EKD
Sbjct: 649  QALFSREVLPQSFSPPPDVKDKGN-QDTIEGQQDSGEKD 686