BLASTX nr result
ID: Akebia24_contig00011355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00011355
(930 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 176 9e-42
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 176 9e-42
gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis] 171 4e-40
ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [A... 171 4e-40
ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutr... 165 2e-38
dbj|BAJ34231.1| unnamed protein product [Thellungiella halophila] 165 2e-38
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165... 164 5e-38
dbj|BAA78111.1| RNA polymerase sigma subunit SigD* [Arabidopsis ... 164 5e-38
ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Caps... 162 1e-37
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu... 159 1e-36
ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Popu... 159 1e-36
ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Popu... 159 1e-36
ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Popu... 159 1e-36
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,... 159 2e-36
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr... 159 2e-36
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu... 153 1e-34
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun... 153 1e-34
ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD,... 152 2e-34
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,... 151 4e-34
ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [... 149 2e-33
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 176 bits (447), Expect = 9e-42
Identities = 94/149 (63%), Positives = 106/149 (71%)
Frame = +1
Query: 484 SIRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRS 663
S ++RS LT RE+A+F L LKE L QWAEA G+ + S
Sbjct: 14 SFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSN--QWAEAVGIKRSS 71
Query: 664 LERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKG 843
L++ LC RESRERI SYRRLVV IA YQGKGLSLQDLIQEGSIGLLRG ERFDP +G
Sbjct: 72 LDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRG 131
Query: 844 YKLSTYVYWWIKQAIIRAIANKSRMIRLP 930
YKLSTYVYWWI+QAI+RAIANKSR+IRLP
Sbjct: 132 YKLSTYVYWWIRQAIVRAIANKSRIIRLP 160
>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 426
Score = 176 bits (447), Expect = 9e-42
Identities = 94/149 (63%), Positives = 106/149 (71%)
Frame = +1
Query: 484 SIRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRS 663
S ++RS LT RE+A+F L LKE L QWAEA G+ + S
Sbjct: 121 SFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSN--QWAEAVGIKRSS 178
Query: 664 LERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKG 843
L++ LC RESRERI SYRRLVV IA YQGKGLSLQDLIQEGSIGLLRG ERFDP +G
Sbjct: 179 LDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRG 238
Query: 844 YKLSTYVYWWIKQAIIRAIANKSRMIRLP 930
YKLSTYVYWWI+QAI+RAIANKSR+IRLP
Sbjct: 239 YKLSTYVYWWIRQAIVRAIANKSRIIRLP 267
>gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 422
Score = 171 bits (433), Expect = 4e-40
Identities = 111/278 (39%), Positives = 150/278 (53%), Gaps = 2/278 (0%)
Frame = +1
Query: 103 SSPMATVSNHSPTLPTISLYSVPTKLSIRXXXXXXXXXXXXXKFGLSVVSEDLXXXXXXX 282
++ M + +H P LPT+SL ++P K G+++VS D
Sbjct: 4 TTSMCSSPSHPPNLPTLSLPTIPAP--------------SPSKVGVNLVSNDALIVAAAA 49
Query: 283 XXXXXXXXXXXDAVSSTITASIDGE--SGLESEDDTMVGIXXXXXXXXXXALEMSNLDSS 456
A + A+ GE SG +S + TM LE+ + D
Sbjct: 50 EAVTLARAAAKAARDALAEAASVGEVWSGNKSSELTM----RRKKRKRGKTLELLDTDEK 105
Query: 457 SCDGLEPNWSIRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWA 636
S DG + +SI + YL+ RE+A+ L LKEG +L + A
Sbjct: 106 S-DGEDMRFSIGPMKLGYLSPREEAECCLILKEGAKLEATRLRMTNSEDHEPTSK--ELA 162
Query: 637 EAAGMNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRG 816
+A GM RS+++ LC RES+ERI+ SYRRLVV +A YQGKGLS DLIQEGS+GLLRG
Sbjct: 163 KAMGMEMRSIDKMLCDKRESQERISRSYRRLVVSVAAGYQGKGLSFPDLIQEGSVGLLRG 222
Query: 817 VERFDPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 930
++FDP++G KLSTYVYWWI+QAIIRAI NKSR++RLP
Sbjct: 223 AQKFDPQRGNKLSTYVYWWIRQAIIRAIENKSRVVRLP 260
>ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [Amborella trichopoda]
gi|548854777|gb|ERN12687.1| hypothetical protein
AMTR_s00025p00248060 [Amborella trichopoda]
Length = 449
Score = 171 bits (433), Expect = 4e-40
Identities = 92/146 (63%), Positives = 105/146 (71%)
Frame = +1
Query: 493 SSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSLER 672
SS YLT RE+A+FSL L+EG RL QWAEA GM + S+ER
Sbjct: 145 SSSEDYLTRREEAEFSLCLREGARLEGIRRKLREKRGREPSRG--QWAEAVGMRESSMER 202
Query: 673 TLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKL 852
L ARE R RIT SYRRLVV IAT+Y GKG+SL DLIQEGS+GLLRG ERFD ++GYKL
Sbjct: 203 RLGIARECRNRITNSYRRLVVSIATSYPGKGMSLSDLIQEGSLGLLRGAERFDHRRGYKL 262
Query: 853 STYVYWWIKQAIIRAIANKSRMIRLP 930
STYVYWWIKQAII+AIA KSR++RLP
Sbjct: 263 STYVYWWIKQAIIKAIATKSRIVRLP 288
>ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum]
gi|557100961|gb|ESQ41324.1| hypothetical protein
EUTSA_v10013654mg [Eutrema salsugineum]
Length = 421
Score = 165 bits (418), Expect = 2e-38
Identities = 86/148 (58%), Positives = 103/148 (69%)
Frame = +1
Query: 487 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSL 666
+ +SRS +L+ E+ Q LYLKEG +L + G KRS
Sbjct: 117 VAASRSGFLSRLEEVQLCLYLKEGAKLENVGTSVEENEIVSVLL-----SSGKGKKKRSA 171
Query: 667 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 846
LCR RE+RE+IT YRRLVV IAT YQGKGL+LQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 172 NEILCRRREAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPERGY 231
Query: 847 KLSTYVYWWIKQAIIRAIANKSRMIRLP 930
KLSTYVYWWIKQAI+RAIA+KSR+++LP
Sbjct: 232 KLSTYVYWWIKQAILRAIAHKSRLVKLP 259
>dbj|BAJ34231.1| unnamed protein product [Thellungiella halophila]
Length = 269
Score = 165 bits (418), Expect = 2e-38
Identities = 86/148 (58%), Positives = 103/148 (69%)
Frame = +1
Query: 487 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSL 666
+ +SRS +L+ E+ Q LYLKEG +L + G KRS
Sbjct: 117 VAASRSGFLSRLEEVQLCLYLKEGAKLENVGTSVEENEIVSVLL-----SSGKGKKKRSA 171
Query: 667 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 846
LCR RE+RE+IT YRRLVV IAT YQGKGL+LQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 172 NEILCRRREAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPERGY 231
Query: 847 KLSTYVYWWIKQAIIRAIANKSRMIRLP 930
KLSTYVYWWIKQAI+RAIA+KSR+++LP
Sbjct: 232 KLSTYVYWWIKQAILRAIAHKSRLVKLP 259
>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
polymerase sigma factor sigD, chloroplastic; Short=Sigma
factor D; Short=Sigma-D; AltName: Full=RNA polymerase
sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
gi|9758039|dbj|BAB08700.1| sigma-like factor
[Arabidopsis thaliana] gi|332004550|gb|AED91933.1| sigma
factor 4 [Arabidopsis thaliana]
Length = 419
Score = 164 bits (415), Expect = 5e-38
Identities = 86/148 (58%), Positives = 102/148 (68%)
Frame = +1
Query: 487 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSL 666
+ +SRS +L+ E+ Q LYLKEG +L A G KRS
Sbjct: 115 VGASRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEENEMVSVLL-----ASGRGKKKRSA 169
Query: 667 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 846
LCR +E+RE+IT YRRLVV IAT YQGKGL+LQDLIQEGSIGLLRG ERFDP +GY
Sbjct: 170 NEILCRRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGY 229
Query: 847 KLSTYVYWWIKQAIIRAIANKSRMIRLP 930
KLSTYVYWWIKQAI+RAIA+KSR+++LP
Sbjct: 230 KLSTYVYWWIKQAILRAIAHKSRLVKLP 257
>dbj|BAA78111.1| RNA polymerase sigma subunit SigD* [Arabidopsis thaliana]
gi|16649075|gb|AAL24389.1| sigma-like factor
[Arabidopsis thaliana] gi|21387209|gb|AAM48008.1|
sigma-like factor [Arabidopsis thaliana]
Length = 267
Score = 164 bits (415), Expect = 5e-38
Identities = 86/148 (58%), Positives = 102/148 (68%)
Frame = +1
Query: 487 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSL 666
+ +SRS +L+ E+ Q LYLKEG +L A G KRS
Sbjct: 115 VGASRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEENEMVSVLL-----ASGRGKKKRSA 169
Query: 667 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 846
LCR +E+RE+IT YRRLVV IAT YQGKGL+LQDLIQEGSIGLLRG ERFDP +GY
Sbjct: 170 NEILCRRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGY 229
Query: 847 KLSTYVYWWIKQAIIRAIANKSRMIRLP 930
KLSTYVYWWIKQAI+RAIA+KSR+++LP
Sbjct: 230 KLSTYVYWWIKQAILRAIAHKSRLVKLP 257
>ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Capsella rubella]
gi|482556540|gb|EOA20732.1| hypothetical protein
CARUB_v10001054mg [Capsella rubella]
Length = 419
Score = 162 bits (411), Expect = 1e-37
Identities = 85/146 (58%), Positives = 101/146 (69%)
Frame = +1
Query: 493 SSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSLER 672
+SRS +L+ E+ Q LYLKEG +L + G KRS
Sbjct: 117 ASRSGFLSRLEEVQLCLYLKEGAKLENLGTSAQENEMVSVLL-----SSGKGKKKRSANE 171
Query: 673 TLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKL 852
LCR +E+RE+IT YRRLVV IAT YQGKGL+LQDLIQEGSIGLLRG ERFDP +GYKL
Sbjct: 172 ILCRRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKL 231
Query: 853 STYVYWWIKQAIIRAIANKSRMIRLP 930
STYVYWWIKQAI+RAIA+KSR+++LP
Sbjct: 232 STYVYWWIKQAILRAIAHKSRLVKLP 257
>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331146|gb|ERP56881.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 159 bits (403), Expect = 1e-36
Identities = 83/148 (56%), Positives = 104/148 (70%)
Frame = +1
Query: 487 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSL 666
+ S + YL+ +E+A+FS+ LK R+ Q A+A M K S+
Sbjct: 118 LESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSK--QLAKALRMEKNSV 175
Query: 667 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 846
+ LC+ RESRE+I SYRRLVV IAT+YQ KGLSLQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 176 DNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGY 235
Query: 847 KLSTYVYWWIKQAIIRAIANKSRMIRLP 930
KLSTYVYWWIK+AI+ AI+N +RM+RLP
Sbjct: 236 KLSTYVYWWIKEAILTAISNNTRMVRLP 263
>ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331144|gb|ERP56879.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 284
Score = 159 bits (403), Expect = 1e-36
Identities = 83/148 (56%), Positives = 104/148 (70%)
Frame = +1
Query: 487 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSL 666
+ S + YL+ +E+A+FS+ LK R+ Q A+A M K S+
Sbjct: 118 LESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSK--QLAKALRMEKNSV 175
Query: 667 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 846
+ LC+ RESRE+I SYRRLVV IAT+YQ KGLSLQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 176 DNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGY 235
Query: 847 KLSTYVYWWIKQAIIRAIANKSRMIRLP 930
KLSTYVYWWIK+AI+ AI+N +RM+RLP
Sbjct: 236 KLSTYVYWWIKEAILTAISNNTRMVRLP 263
>ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331143|gb|ERP56878.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 276
Score = 159 bits (403), Expect = 1e-36
Identities = 83/148 (56%), Positives = 104/148 (70%)
Frame = +1
Query: 487 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSL 666
+ S + YL+ +E+A+FS+ LK R+ Q A+A M K S+
Sbjct: 118 LESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSK--QLAKALRMEKNSV 175
Query: 667 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 846
+ LC+ RESRE+I SYRRLVV IAT+YQ KGLSLQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 176 DNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGY 235
Query: 847 KLSTYVYWWIKQAIIRAIANKSRMIRLP 930
KLSTYVYWWIK+AI+ AI+N +RM+RLP
Sbjct: 236 KLSTYVYWWIKEAILTAISNNTRMVRLP 263
>ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331142|gb|ERP56877.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 331
Score = 159 bits (403), Expect = 1e-36
Identities = 83/148 (56%), Positives = 104/148 (70%)
Frame = +1
Query: 487 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSL 666
+ S + YL+ +E+A+FS+ LK R+ Q A+A M K S+
Sbjct: 118 LESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSK--QLAKALRMEKNSV 175
Query: 667 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 846
+ LC+ RESRE+I SYRRLVV IAT+YQ KGLSLQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 176 DNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGY 235
Query: 847 KLSTYVYWWIKQAIIRAIANKSRMIRLP 930
KLSTYVYWWIK+AI+ AI+N +RM+RLP
Sbjct: 236 KLSTYVYWWIKEAILTAISNNTRMVRLP 263
>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Citrus sinensis]
Length = 436
Score = 159 bits (401), Expect = 2e-36
Identities = 84/143 (58%), Positives = 101/143 (70%)
Frame = +1
Query: 502 SVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSLERTLC 681
++YLT E+A+ LKEG +L Q A+A GM + +++ LC
Sbjct: 137 NLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISK--QLAKATGMKQSKVDKILC 194
Query: 682 RARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKLSTY 861
+ RES+ERI SYR LVV IAT YQGKGLSL+DLIQEGSIGLLRG +RF+P++GYKLSTY
Sbjct: 195 KERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTY 254
Query: 862 VYWWIKQAIIRAIANKSRMIRLP 930
VYWWIKQAIIR IANKSR IRLP
Sbjct: 255 VYWWIKQAIIRTIANKSRTIRLP 277
>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
gi|557541154|gb|ESR52198.1| hypothetical protein
CICLE_v10033747mg [Citrus clementina]
Length = 436
Score = 159 bits (401), Expect = 2e-36
Identities = 84/143 (58%), Positives = 101/143 (70%)
Frame = +1
Query: 502 SVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSLERTLC 681
++YLT E+A+ LKEG +L Q A+A GM + +++ LC
Sbjct: 137 NLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISK--QLAKATGMKQSKVDKILC 194
Query: 682 RARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKLSTY 861
+ RES+ERI SYR LVV IAT YQGKGLSL+DLIQEGSIGLLRG +RF+P++GYKLSTY
Sbjct: 195 KERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTY 254
Query: 862 VYWWIKQAIIRAIANKSRMIRLP 930
VYWWIKQAIIR IANKSR IRLP
Sbjct: 255 VYWWIKQAIIRTIANKSRTIRLP 277
>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331145|gb|ERP56880.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 419
Score = 153 bits (386), Expect = 1e-34
Identities = 81/146 (55%), Positives = 101/146 (69%)
Frame = +1
Query: 487 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSL 666
+ S + YL+ +E+A+FS+ LK R+ Q A+A M K S+
Sbjct: 118 LESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSK--QLAKALRMEKNSV 175
Query: 667 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 846
+ LC+ RESRE+I SYRRLVV IAT+YQ KGLSLQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 176 DNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGY 235
Query: 847 KLSTYVYWWIKQAIIRAIANKSRMIR 924
KLSTYVYWWIK+AI+ AI+N +RM R
Sbjct: 236 KLSTYVYWWIKEAILTAISNNTRMRR 261
>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
gi|462415663|gb|EMJ20400.1| hypothetical protein
PRUPE_ppa017025mg [Prunus persica]
Length = 440
Score = 153 bits (386), Expect = 1e-34
Identities = 82/144 (56%), Positives = 102/144 (70%)
Frame = +1
Query: 499 RSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSLERTL 678
R +L+ RE+A+ L LKEG RL Q A+A GM RS+++ L
Sbjct: 140 RYEHLSPREEAECCLSLKEGARLESERFRVVEAQKHEPTSK--QLAKAMGMKMRSIDKVL 197
Query: 679 CRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKLST 858
C+ RES+E+I SYR LVV +A++YQGKGLS QDLIQEGSIGLLRG E+FD ++ +KLST
Sbjct: 198 CKRRESQEKIIRSYRGLVVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHEREWKLST 257
Query: 859 YVYWWIKQAIIRAIANKSRMIRLP 930
YVYWWI+QAIIRAI NKSR+IRLP
Sbjct: 258 YVYWWIRQAIIRAIENKSRIIRLP 281
>ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Solanum tuberosum]
Length = 421
Score = 152 bits (384), Expect = 2e-34
Identities = 84/163 (51%), Positives = 109/163 (66%), Gaps = 4/163 (2%)
Frame = +1
Query: 454 SSCDGLEPNWSIRSSRSV----YLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXX 621
S C +E I +S+ + YLT E+A++S YLKE R+
Sbjct: 101 SECLEMEKGDRILNSKPLKTGFYLTHEEEAKYSWYLKEEARIEILRKMVEETSEIDLSSK 160
Query: 622 XXQWAEAAGMNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSI 801
Q A+AAGM+ + L++ L A+ES+++I YR LVV +A +YQGKGLSLQDLIQEGSI
Sbjct: 161 --QLAKAAGMSTQRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSI 218
Query: 802 GLLRGVERFDPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 930
GLL G ++F+PKKGYKLSTY YWWI+QAI RA+ANKSR+IRLP
Sbjct: 219 GLLHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLP 261
>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 452
Score = 151 bits (381), Expect = 4e-34
Identities = 80/141 (56%), Positives = 98/141 (69%)
Frame = +1
Query: 508 YLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSLERTLCRA 687
YL+ RE+A + LKEG +L Q A A + S+++ +C
Sbjct: 155 YLSPREEADCCMSLKEGAKLESERTRFTEAQEHEPTSK--QLANAMRIKMSSIDKVICNR 212
Query: 688 RESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKLSTYVY 867
RES+ERI SYR LVV +A++YQGKGLSLQDLIQEGSIGLLRG E+FDP++G KLSTYVY
Sbjct: 213 RESQERIIKSYRGLVVSVASSYQGKGLSLQDLIQEGSIGLLRGAEKFDPERGLKLSTYVY 272
Query: 868 WWIKQAIIRAIANKSRMIRLP 930
WWI+QAIIRAI NKSR+IRLP
Sbjct: 273 WWIRQAIIRAIENKSRIIRLP 293
>ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223543041|gb|EEF44576.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 389
Score = 149 bits (375), Expect = 2e-33
Identities = 79/141 (56%), Positives = 100/141 (70%)
Frame = +1
Query: 508 YLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXXQWAEAAGMNKRSLERTLCRA 687
YL+S E+A+F L LK+ R+ Q AEA M K+++++ LC+
Sbjct: 116 YLSSIEEAEFCLCLKDHARVEAARRRIAETQEHEPTSK--QLAEALRMRKKNVDKILCKG 173
Query: 688 RESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKLSTYVY 867
R+SRERIT +YRRLV+ IA Y+GKGLSLQDLIQEGSIGLLRG ERFDPK+G KLSTYVY
Sbjct: 174 RQSRERITGNYRRLVLSIANRYRGKGLSLQDLIQEGSIGLLRGAERFDPKRGNKLSTYVY 233
Query: 868 WWIKQAIIRAIANKSRMIRLP 930
WWIK+AII +I+ SR++R P
Sbjct: 234 WWIKEAIITSISINSRIVRQP 254