BLASTX nr result
ID: Akebia24_contig00011354
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00011354 (572 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24961.3| unnamed protein product [Vitis vinifera] 189 4e-46 ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 189 4e-46 ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr... 184 2e-44 ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,... 182 5e-44 gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis] 179 3e-43 ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,... 174 1e-41 ref|XP_003599429.1| RNA polymerase sigma factor rpoD [Medicago t... 174 1e-41 ref|XP_003599441.1| RNA polymerase sigma factor [Medicago trunca... 172 6e-41 ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca... 172 6e-41 ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun... 171 1e-40 ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [A... 167 1e-39 ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD,... 162 4e-38 ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phas... 160 2e-37 ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phas... 160 2e-37 ref|XP_007148892.1| hypothetical protein PHAVU_005G023100g [Phas... 160 2e-37 ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD,... 156 4e-36 ref|XP_002873625.1| hypothetical protein ARALYDRAFT_909325 [Arab... 154 1e-35 ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD,... 154 2e-35 ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165... 154 2e-35 ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutr... 150 2e-34 >emb|CBI24961.3| unnamed protein product [Vitis vinifera] Length = 319 Score = 189 bits (480), Expect = 4e-46 Identities = 98/147 (66%), Positives = 119/147 (80%), Gaps = 1/147 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GS+CEM+AKI+EA T+LSRRL R PTY EIA+ I V VS VRLV ERSR+PIS+D+ +T Sbjct: 161 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 220 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 +GC LQ IIPGPDE P+ MV +QLMKQ+V+ L TL ERE ILRL++G+NGETP S Sbjct: 221 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 280 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQ 134 EEIGRL+ LSRER+RQI+ IAL+KLRQ Sbjct: 281 EEIGRLMKLSRERVRQINSIALSKLRQ 307 >ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera] Length = 426 Score = 189 bits (480), Expect = 4e-46 Identities = 98/147 (66%), Positives = 119/147 (80%), Gaps = 1/147 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GS+CEM+AKI+EA T+LSRRL R PTY EIA+ I V VS VRLV ERSR+PIS+D+ +T Sbjct: 268 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 327 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 +GC LQ IIPGPDE P+ MV +QLMKQ+V+ L TL ERE ILRL++G+NGETP S Sbjct: 328 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 387 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQ 134 EEIGRL+ LSRER+RQI+ IAL+KLRQ Sbjct: 388 EEIGRLMKLSRERVRQINSIALSKLRQ 414 >ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina] gi|557541154|gb|ESR52198.1| hypothetical protein CICLE_v10033747mg [Citrus clementina] Length = 436 Score = 184 bits (466), Expect = 2e-44 Identities = 99/159 (62%), Positives = 123/159 (77%), Gaps = 1/159 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GSM M+AKI+EAN +LSRRL R PT +EIA+ + + VS VRL ER+R PIS+D IT Sbjct: 278 GSMSGMVAKIAEANNVLSRRLRRMPTDNEIAEMLNIHVSTVRLAIERTRHPISLDGAITD 337 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 GC LQ IIPGPDE PE MV KQLMKQ+++ LL+TL+ERE ILRLH+GL+G+TP SC Sbjct: 338 TGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSC 397 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 98 +EIGRLL LSRER+RQI IALTKL+Q + N +++MV Sbjct: 398 KEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436 >ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like [Citrus sinensis] Length = 436 Score = 182 bits (462), Expect = 5e-44 Identities = 99/159 (62%), Positives = 122/159 (76%), Gaps = 1/159 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GSM M+AKI+EAN +LSRRL R PT EIA+ + + VS VRL ER+R PIS+D IT Sbjct: 278 GSMSGMVAKIAEANNVLSRRLRRMPTDSEIAEMLNIHVSNVRLAIERTRHPISLDGAITD 337 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 GC LQ IIPGPDE PE MV KQLMKQ+++ LL+TL+ERE ILRLH+GL+G+TP SC Sbjct: 338 TGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSC 397 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 98 +EIGRLL LSRER+RQI IALTKL+Q + N +++MV Sbjct: 398 KEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436 >gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis] Length = 422 Score = 179 bits (455), Expect = 3e-43 Identities = 94/148 (63%), Positives = 118/148 (79%), Gaps = 2/148 (1%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 G+MC ++AK++EAN +L++RL R PTY EIA + V VS VRLV ER R PIS+DR IT Sbjct: 261 GNMCGIVAKVTEANNVLNKRLRRFPTYDEIAQVVGVHVSTVRLVSERIRPPISLDRAITE 320 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKT-LNEREELILRLHYGLNGETPRS 218 GC LQ IIPGP+E+ PE MV KQLMKQ+++ LLKT L++RE +LRLH+GL+G+ P S Sbjct: 321 RGCMTLQEIIPGPEEISPEKMVRKQLMKQEIEKLLKTVLSDREANVLRLHFGLSGDIPLS 380 Query: 217 CEEIGRLLNLSRERIRQIHCIALTKLRQ 134 CEEIGRLL LSRERIRQI+ IAL+KL+Q Sbjct: 381 CEEIGRLLKLSRERIRQINGIALSKLQQ 408 >ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like [Fragaria vesca subsp. vesca] Length = 452 Score = 174 bits (442), Expect = 1e-41 Identities = 88/147 (59%), Positives = 115/147 (78%), Gaps = 1/147 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 G MC ++AKI+ A ++R R P++ EIA+ I V SIVRLVCERSR P+S+DR +T Sbjct: 294 GHMCGVMAKITRAKKNFNQRFQRLPSHDEIAEMINVQASIVRLVCERSRLPLSLDRVVTD 353 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 +GC LQ II GPDE+ PETM+ KQLMKQ+++ LL L++RE +LRLH+GLNG+TP+S Sbjct: 354 QGCMALQDIIRGPDEMMPETMLKKQLMKQEMEKLLNRLSDREAEVLRLHFGLNGDTPQSF 413 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQ 134 EEIGRLL LSRER+RQI+ IAL+KL+Q Sbjct: 414 EEIGRLLKLSRERVRQINSIALSKLKQ 440 >ref|XP_003599429.1| RNA polymerase sigma factor rpoD [Medicago truncatula] gi|355488477|gb|AES69680.1| RNA polymerase sigma factor rpoD [Medicago truncatula] Length = 185 Score = 174 bits (441), Expect = 1e-41 Identities = 95/147 (64%), Positives = 116/147 (78%), Gaps = 1/147 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 G M+AKI+EAN +L RRL R+PTY+EIA+ + V VS V+LV ERSR PIS+DR+IT Sbjct: 27 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 86 Query: 391 EGCSIL-QIIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 + IL +IIPGP E+ PE MV +QLMKQ V LL TL++REE I+RL++GLNGETP S Sbjct: 87 QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 146 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQ 134 EEIG+LL LSRERIRQIH IAL+KLRQ Sbjct: 147 EEIGKLLKLSRERIRQIHGIALSKLRQ 173 >ref|XP_003599441.1| RNA polymerase sigma factor [Medicago truncatula] gi|355488489|gb|AES69692.1| RNA polymerase sigma factor [Medicago truncatula] Length = 267 Score = 172 bits (436), Expect = 6e-41 Identities = 94/147 (63%), Positives = 115/147 (78%), Gaps = 1/147 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 G M+AKI+EAN +L RRL R+PTY+EIA+ + V VS V+LV ERSR PIS+DR+IT Sbjct: 109 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 168 Query: 391 EGCSIL-QIIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 + IL +IIPGP E+ PE MV +QLMKQ V LL TL++REE I+RL++GLNGETP S Sbjct: 169 QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 228 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQ 134 EEIG+LL LSRERIRQIH IAL+KL Q Sbjct: 229 EEIGKLLKLSRERIRQIHGIALSKLEQ 255 >ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula] gi|355488487|gb|AES69690.1| RNA polymerase sigma factor [Medicago truncatula] Length = 403 Score = 172 bits (436), Expect = 6e-41 Identities = 94/147 (63%), Positives = 115/147 (78%), Gaps = 1/147 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 G M+AKI+EAN +L RRL R+PTY+EIA+ + V VS V+LV ERSR PIS+DR+IT Sbjct: 245 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 304 Query: 391 EGCSIL-QIIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 + IL +IIPGP E+ PE MV +QLMKQ V LL TL++REE I+RL++GLNGETP S Sbjct: 305 QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 364 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQ 134 EEIG+LL LSRERIRQIH IAL+KL Q Sbjct: 365 EEIGKLLKLSRERIRQIHGIALSKLEQ 391 >ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica] gi|462415663|gb|EMJ20400.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica] Length = 440 Score = 171 bits (434), Expect = 1e-40 Identities = 90/159 (56%), Positives = 122/159 (76%), Gaps = 1/159 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 G +C M+AKI++A L++R R P++ EIA+ I+V S V+LVCERSR PIS+DR T Sbjct: 282 GHVCGMMAKITKAQNSLNQRFQRLPSHDEIAEVIKVNASTVKLVCERSRPPISLDRVATV 341 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 G LQ II GP+E+ PE M+ +QLMKQ+V+ LLKTL++RE +LRLH+GLNGE+P+S Sbjct: 342 RGSMTLQEIIQGPEEMMPEKMLIRQLMKQEVEKLLKTLSDREANVLRLHFGLNGESPQSF 401 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 98 EEIGRLL LSRER+RQI+ IAL+KLRQ + N ++++V Sbjct: 402 EEIGRLLKLSRERVRQINGIALSKLRQTSILDNLKLYIV 440 >ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [Amborella trichopoda] gi|548854777|gb|ERN12687.1| hypothetical protein AMTR_s00025p00248060 [Amborella trichopoda] Length = 449 Score = 167 bits (424), Expect = 1e-39 Identities = 86/147 (58%), Positives = 112/147 (76%), Gaps = 1/147 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GSMC +AK+SEA+ +L RLGR+P+ EIA+ + +S VRLV ER R P+SID+ + Sbjct: 289 GSMCATVAKVSEASGVLMSRLGRRPSQEEIAEKTGIALSRVRLVTERCRLPLSIDQPLGR 348 Query: 391 EG-CSILQIIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 G S+ II GP+E RPE MV ++ MK ++ LL+TL+EREE I+RL +G+NGETP+SC Sbjct: 349 HGDISLKDIIAGPEETRPEEMVKREWMKGTMEMLLQTLSEREECIVRLQFGMNGETPKSC 408 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQ 134 +EIGRLLNLSRER+RQIH IAL KLRQ Sbjct: 409 DEIGRLLNLSRERVRQIHYIALAKLRQ 435 >ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like [Cicer arietinum] Length = 407 Score = 162 bits (411), Expect = 4e-38 Identities = 87/150 (58%), Positives = 113/150 (75%), Gaps = 1/150 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 G M+ KI+EA +LS+RL R+PTY+E+A+ + V VSIV+LV ERSR PIS+D+ + Sbjct: 249 GEKYGMVGKIAEAKNVLSKRLRRKPTYNEMAEVLNVNVSIVKLVSERSRQPISLDKAVFD 308 Query: 391 EG-CSILQIIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 +G ++ +I+PGP E+ PE MV +QL KQ V LL TLN+RE ILRL++GLNGETP S Sbjct: 309 QGNLTLKEIMPGPVEMIPEKMVERQLKKQGVVKLLNTLNKREAEILRLYFGLNGETPLSF 368 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQILL 125 EEIG+ L LSRERIRQIH IAL+KL+Q L Sbjct: 369 EEIGKQLKLSRERIRQIHGIALSKLQQTTL 398 >ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris] gi|561022159|gb|ESW20889.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris] Length = 367 Score = 160 bits (405), Expect = 2e-37 Identities = 84/155 (54%), Positives = 116/155 (74%), Gaps = 1/155 (0%) Frame = -2 Query: 559 EMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITHEGCS 380 EM+AK+++AN +LS RL R+PTY E A+ + V S +RLV E+SR PIS+D+ +T G Sbjct: 213 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHM 272 Query: 379 ILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSCEEIG 203 LQ IIPGP+++ PE MV +QLMKQ+V LL TL++RE I+ L+YGLNGETP + +EIG Sbjct: 273 TLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIG 332 Query: 202 RLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 98 ++ LSRERIRQI+ IAL+KLRQ + N + ++V Sbjct: 333 GMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 367 >ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris] gi|561022157|gb|ESW20887.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris] Length = 366 Score = 160 bits (405), Expect = 2e-37 Identities = 84/155 (54%), Positives = 116/155 (74%), Gaps = 1/155 (0%) Frame = -2 Query: 559 EMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITHEGCS 380 EM+AK+++AN +LS RL R+PTY E A+ + V S +RLV E+SR PIS+D+ +T G Sbjct: 212 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHM 271 Query: 379 ILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSCEEIG 203 LQ IIPGP+++ PE MV +QLMKQ+V LL TL++RE I+ L+YGLNGETP + +EIG Sbjct: 272 TLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIG 331 Query: 202 RLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 98 ++ LSRERIRQI+ IAL+KLRQ + N + ++V Sbjct: 332 GMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 366 >ref|XP_007148892.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris] gi|561022156|gb|ESW20886.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris] Length = 296 Score = 160 bits (405), Expect = 2e-37 Identities = 84/155 (54%), Positives = 116/155 (74%), Gaps = 1/155 (0%) Frame = -2 Query: 559 EMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITHEGCS 380 EM+AK+++AN +LS RL R+PTY E A+ + V S +RLV E+SR PIS+D+ +T G Sbjct: 142 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHM 201 Query: 379 ILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSCEEIG 203 LQ IIPGP+++ PE MV +QLMKQ+V LL TL++RE I+ L+YGLNGETP + +EIG Sbjct: 202 TLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIG 261 Query: 202 RLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 98 ++ LSRERIRQI+ IAL+KLRQ + N + ++V Sbjct: 262 GMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 296 >ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like [Solanum lycopersicum] Length = 442 Score = 156 bits (394), Expect = 4e-36 Identities = 83/148 (56%), Positives = 113/148 (76%), Gaps = 2/148 (1%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GS+ E++ KI ANT LSR+L R P+Y EIA+ + + VS VRLV ER+R+PISID+ +T Sbjct: 283 GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQIVTT 342 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKT-LNEREELILRLHYGLNGETPRS 218 +G LQ II GP++ PE V +Q+MKQ ++ +L+ L +RE IL+LH+GLNG+TP+S Sbjct: 343 QGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILQNVLCDREAKILKLHFGLNGDTPQS 402 Query: 217 CEEIGRLLNLSRERIRQIHCIALTKLRQ 134 EEIGR+L LSRERIRQI+C AL+KLR+ Sbjct: 403 FEEIGRVLKLSRERIRQINCTALSKLRE 430 >ref|XP_002873625.1| hypothetical protein ARALYDRAFT_909325 [Arabidopsis lyrata subsp. lyrata] gi|297319462|gb|EFH49884.1| hypothetical protein ARALYDRAFT_909325 [Arabidopsis lyrata subsp. lyrata] Length = 273 Score = 154 bits (390), Expect = 1e-35 Identities = 80/148 (54%), Positives = 109/148 (73%), Gaps = 1/148 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GSM E+ AK++EA+ +L+R+L RQP+ EIA+ + + VS VRL ERSRSP+S+DR ++ Sbjct: 112 GSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLHVSAVRLAVERSRSPVSLDRVVSQ 171 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 G LQ I+ GPDE RPE MV ++ MK +++ LL +L RE +L L++GLNGETP S Sbjct: 172 NGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSF 231 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQI 131 EEIG+ L LSRER+RQI+ IAL KLR + Sbjct: 232 EEIGKSLKLSRERVRQINGIALKKLRNV 259 >ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like [Solanum tuberosum] Length = 421 Score = 154 bits (389), Expect = 2e-35 Identities = 82/148 (55%), Positives = 111/148 (75%), Gaps = 2/148 (1%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GS+ E++ KI ANT LSR+L R P+Y EIA+ + + VS VRLV ER+R+PISID+ +T Sbjct: 262 GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQIVTS 321 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLL-KTLNEREELILRLHYGLNGETPRS 218 +G LQ II GP++ PE V +Q+MKQ ++ +L L +RE IL+LH+GLNG+ P+S Sbjct: 322 QGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILHNVLCDREAKILKLHFGLNGDNPQS 381 Query: 217 CEEIGRLLNLSRERIRQIHCIALTKLRQ 134 EEIGR+L LSRERIRQI+C AL+KLR+ Sbjct: 382 FEEIGRVLKLSRERIRQINCTALSKLRE 409 >ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA polymerase sigma factor sigD, chloroplastic; Short=Sigma factor D; Short=Sigma-D; AltName: Full=RNA polymerase sigma factor sig4; Short=Atsig4; Short=Sigma factor 4; Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1| RNA polymerase sigma subunit SigD [Arabidopsis thaliana] gi|9758039|dbj|BAB08700.1| sigma-like factor [Arabidopsis thaliana] gi|332004550|gb|AED91933.1| sigma factor 4 [Arabidopsis thaliana] Length = 419 Score = 154 bits (388), Expect = 2e-35 Identities = 80/148 (54%), Positives = 108/148 (72%), Gaps = 1/148 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GSM E+ AK++EA+ +L+R+L RQP+ EIA+ + + VS VRL ERSRSP+S+DR + Sbjct: 258 GSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRLAVERSRSPVSLDRVASQ 317 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 G LQ I+ GPDE RPE MV ++ MK +++ LL +L RE +L L++GLNGETP S Sbjct: 318 NGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSF 377 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQI 131 EEIG+ L LSRER+RQI+ IAL KLR + Sbjct: 378 EEIGKSLKLSRERVRQINGIALKKLRNV 405 >ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum] gi|557100961|gb|ESQ41324.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum] Length = 421 Score = 150 bits (379), Expect = 2e-34 Identities = 79/148 (53%), Positives = 107/148 (72%), Gaps = 1/148 (0%) Frame = -2 Query: 571 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 392 GSM E+ AK++EA+ +L+R+L R P+ EIA+ + + VS VRL ER RSP+S+DR + Sbjct: 260 GSMWELTAKVAEASNVLTRKLKRIPSCEEIAEHLNIHVSAVRLAVERGRSPVSLDRVASL 319 Query: 391 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 215 G LQ I+ GPDE RPE MV ++ MK +++ LL +L RE +L L++GLNGETP S Sbjct: 320 NGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSF 379 Query: 214 EEIGRLLNLSRERIRQIHCIALTKLRQI 131 EEIG+ L LSRER+RQI+ IALTKLR + Sbjct: 380 EEIGKSLKLSRERVRQINGIALTKLRNV 407