BLASTX nr result

ID: Akebia24_contig00010483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00010483
         (364 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...    58   2e-06
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A...    56   6e-06
emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]    55   8e-06

>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/65 (35%), Positives = 38/65 (58%)
 Frame = +1

Query: 19  TLLMMLEGWAYNIFSHRKRHLWAILPSAIAWGLWKERNNRVFQSKENNSHTVYMEILGLL 198
           +++ +L+ W  +  + +    W I+P+ I W +WKERN R F+ K+NN   +    LGL 
Sbjct: 136 SIIEVLQCWNRDGNAGKNEKRWRIVPACIWWTIWKERNQRCFEGKQNNIQKIKTNCLGLY 195

Query: 199 FFWAK 213
           +FW K
Sbjct: 196 YFWCK 200


>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 517

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/61 (36%), Positives = 34/61 (55%)
 Frame = +1

Query: 31  MLEGWAYNIFSHRKRHLWAILPSAIAWGLWKERNNRVFQSKENNSHTVYMEILGLLFFWA 210
           +L+ W     +  ++  W ++PS I W +WKERNNR F ++ N+ H V    +  L FW 
Sbjct: 440 VLKSWVRRGSTKSQKRWWRLIPSCIWWSVWKERNNRCFDNRSNSIHKVKWNCIVSLLFWC 499

Query: 211 K 213
           K
Sbjct: 500 K 500


>emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]
          Length = 1882

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/74 (39%), Positives = 36/74 (48%)
 Frame = +1

Query: 58   FSHRKRHLWAILPSAIAWGLWKERNNRVFQSKENNSHTVYMEILGLLFFWAKLSKDFSGF 237
            FS R   LW     AI W +W+ERN R+F+ K  NS  ++  I  L  FWA  SK F G 
Sbjct: 1809 FSKRGIVLWQNACIAIMWVVWRERNARIFEDKARNSEYLWDSICFLTSFWAFCSKVFKGI 1868

Query: 238  SFEDFVFRWDSICN 279
                    W + CN
Sbjct: 1869 PLNMLQLDWLAACN 1882


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