BLASTX nr result

ID: Akebia24_contig00010046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00010046
         (394 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140...    74   3e-11
ref|XP_002302114.1| mRNA-binding family protein [Populus trichoc...    73   4e-11
ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 ...    72   6e-11
ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 ...    72   6e-11
ref|NP_001234656.1| mRNA binding protein precursor [Solanum lyco...    72   6e-11
ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding pro...    72   8e-11
ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citr...    72   8e-11
ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Popu...    72   1e-10
ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula] g...    71   2e-10
ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula] g...    71   2e-10
ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putativ...    71   2e-10
gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 precursor,...    70   2e-10
ref|XP_007144635.1| hypothetical protein PHAVU_007G172100g [Phas...    70   4e-10
gb|ACA52215.1| chloroplast mRNA-binding protein precursor-like p...    69   7e-10
gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotian...    69   7e-10
ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding pro...    69   9e-10
ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding pro...    69   9e-10
gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]      68   2e-09
ref|XP_007199894.1| hypothetical protein PRUPE_ppa006606mg [Prun...    68   2e-09
ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding pro...    67   2e-09

>ref|XP_002275066.1| PREDICTED: uncharacterized protein At3g63140, chloroplastic [Vitis
           vinifera] gi|147789789|emb|CAN73874.1| hypothetical
           protein VITISV_039540 [Vitis vinifera]
          Length = 397

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = -2

Query: 132 LSSLTINATVEKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           LS  T+N   +KKKVLIVNTNSGGHA+IGFYFAK+LLGSGHEV+
Sbjct: 59  LSFSTLNVKAQKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVT 102


>ref|XP_002302114.1| mRNA-binding family protein [Populus trichocarpa]
           gi|222843840|gb|EEE81387.1| mRNA-binding family protein
           [Populus trichocarpa]
          Length = 404

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 36/44 (81%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
 Frame = -2

Query: 129 SSLTINATV-EKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           SS T+ A+  EKKKVLIVNTNSGGHA+IGFYFAKELLGSGHEV+
Sbjct: 66  SSFTVKASAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVT 109


>ref|XP_007050621.1| Chloroplast stem-loop binding protein of 41 kDa isoform 2
           [Theobroma cacao] gi|508702882|gb|EOX94778.1|
           Chloroplast stem-loop binding protein of 41 kDa isoform
           2 [Theobroma cacao]
          Length = 393

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/46 (80%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
 Frame = -2

Query: 135 SLSSLTINATV-EKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           S SS T+ A+  EKKKVLIVNTNSGGHA+IGFYFAKELLGSGHEV+
Sbjct: 60  SPSSFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVT 105


>ref|XP_007050620.1| Chloroplast stem-loop binding protein of 41 kDa isoform 1
           [Theobroma cacao] gi|508702881|gb|EOX94777.1|
           Chloroplast stem-loop binding protein of 41 kDa isoform
           1 [Theobroma cacao]
          Length = 400

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/46 (80%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
 Frame = -2

Query: 135 SLSSLTINATV-EKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           S SS T+ A+  EKKKVLIVNTNSGGHA+IGFYFAKELLGSGHEV+
Sbjct: 60  SPSSFTVKASGGEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVT 105


>ref|NP_001234656.1| mRNA binding protein precursor [Solanum lycopersicum]
           gi|26453355|gb|AAD21574.3| mRNA binding protein
           precursor [Solanum lycopersicum]
          Length = 407

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = -2

Query: 141 HPSLSSLTINATVEKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           + S S +  +  VEKKKVLIVNTNSGGHA+IGFYFAKELLGSGH+V+
Sbjct: 66  YSSTSVVQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVT 112


>ref|XP_006349675.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Solanum tuberosum]
          Length = 401

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 3/48 (6%)
 Frame = -2

Query: 135 SLSSLTI---NATVEKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           S SS T+   +  VEKKKVLIVNTNSGGHA+IGFYFAKELLGSGH+V+
Sbjct: 59  SYSSTTVVQASGAVEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVT 106


>ref|XP_006444077.1| hypothetical protein CICLE_v10020449mg [Citrus clementina]
           gi|568852108|ref|XP_006479722.1| PREDICTED: chloroplast
           stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Citrus sinensis]
           gi|557546339|gb|ESR57317.1| hypothetical protein
           CICLE_v10020449mg [Citrus clementina]
          Length = 401

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/49 (71%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
 Frame = -2

Query: 144 KHPSLSSLTINATV-EKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           +  S+S+ T+ A+  EKKKVLIVNTNSGGHA+IGFY AKELLGSGHEV+
Sbjct: 58  RRSSVSAFTVKASAAEKKKVLIVNTNSGGHAVIGFYLAKELLGSGHEVT 106


>ref|XP_002306773.2| hypothetical protein POPTR_0005s23110g [Populus trichocarpa]
           gi|550339578|gb|EEE93769.2| hypothetical protein
           POPTR_0005s23110g [Populus trichocarpa]
          Length = 437

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 35/44 (79%), Positives = 39/44 (88%), Gaps = 1/44 (2%)
 Frame = -2

Query: 129 SSLTINATV-EKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           SS  + A+  EKKK+LIVNTNSGGHA+IGFYFAKELLGSGHEVS
Sbjct: 99  SSFPVKASAAEKKKILIVNTNSGGHAVIGFYFAKELLGSGHEVS 142


>ref|XP_003590650.1| MRNA-binding protein [Medicago truncatula]
           gi|355479698|gb|AES60901.1| MRNA-binding protein
           [Medicago truncatula]
          Length = 419

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 9/56 (16%)
 Frame = -2

Query: 141 HPSLSS--------LTINATV-EKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           HPSL+S        L+I+A+  EKKKVLI+NTNSGGHA+IGFYFAKELLG+GH V+
Sbjct: 51  HPSLTSKRLANHATLSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVT 106


>ref|XP_003590649.1| MRNA-binding protein [Medicago truncatula]
           gi|355479697|gb|AES60900.1| MRNA-binding protein
           [Medicago truncatula]
          Length = 401

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/56 (66%), Positives = 45/56 (80%), Gaps = 9/56 (16%)
 Frame = -2

Query: 141 HPSLSS--------LTINATV-EKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           HPSL+S        L+I+A+  EKKKVLI+NTNSGGHA+IGFYFAKELLG+GH V+
Sbjct: 51  HPSLTSKRLANHATLSISASAAEKKKVLIINTNSGGHAVIGFYFAKELLGAGHSVT 106


>ref|XP_002520744.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis]
           gi|223540129|gb|EEF41706.1| NAD dependent
           epimerase/dehydratase, putative [Ricinus communis]
          Length = 398

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 35/44 (79%), Positives = 39/44 (88%), Gaps = 1/44 (2%)
 Frame = -2

Query: 129 SSLTINATVE-KKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           SS T+ A+   KKKVLIVNTNSGGHA+IGFYFAKELLGSGHEV+
Sbjct: 66  SSFTVKASAAAKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVT 109


>gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 precursor, partial [Spinacia
           oleracea]
          Length = 415

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/43 (72%), Positives = 39/43 (90%)
 Frame = -2

Query: 129 SSLTINATVEKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           +S+  + + +KKKVLIVNTNSGGHA+IGFYFAKELLGSGH+V+
Sbjct: 79  TSINASTSTDKKKVLIVNTNSGGHAVIGFYFAKELLGSGHQVT 121


>ref|XP_007144635.1| hypothetical protein PHAVU_007G172100g [Phaseolus vulgaris]
           gi|561017825|gb|ESW16629.1| hypothetical protein
           PHAVU_007G172100g [Phaseolus vulgaris]
          Length = 402

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 34/44 (77%), Positives = 41/44 (93%), Gaps = 1/44 (2%)
 Frame = -2

Query: 129 SSLTINAT-VEKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           S+ +++A+ VEKKKVLIVNTNSGGHAIIGFYFAKELLG+GH V+
Sbjct: 64  SAFSVSASSVEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVT 107


>gb|ACA52215.1| chloroplast mRNA-binding protein precursor-like protein [Oenothera
           elata subsp. hookeri]
          Length = 91

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = -2

Query: 138 PSLSSLTINATVEKKKVLIVNTNSGGHAIIGFYFAKELLGS 16
           P  SS T++A+ EKKKVLIVNTNSGGHA+IGFYFAKELL S
Sbjct: 51  PRFSSFTVSASAEKKKVLIVNTNSGGHAVIGFYFAKELLAS 91


>gb|AAP87140.1| mRNA-binding protein precursor, partial [Nicotiana tabacum]
          Length = 405

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -2

Query: 111 ATVEKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           +  EKKKVLIVNTNSGGHA+IGFYFAKELLGSGH+V+
Sbjct: 74  SAAEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVT 110


>ref|XP_004495202.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Cicer arietinum]
          Length = 403

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 30/47 (63%), Positives = 39/47 (82%)
 Frame = -2

Query: 141 HPSLSSLTINATVEKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           H +  ++T  A++ KKKVLI+NTNSGGHA+IGFYFAKELL +GH V+
Sbjct: 62  HAASFTITATASLNKKKVLIINTNSGGHAVIGFYFAKELLAAGHSVT 108


>ref|XP_004290655.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 404

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 31/34 (91%), Positives = 34/34 (100%)
 Frame = -2

Query: 102 EKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           +KKKVLIVNTNSGGHA+IGFYFAKELLGSGHEV+
Sbjct: 76  DKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVT 109


>gb|EXB39373.1| hypothetical protein L484_025068 [Morus notabilis]
          Length = 408

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/47 (65%), Positives = 39/47 (82%)
 Frame = -2

Query: 141 HPSLSSLTINATVEKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           +P+ S     +  +KK+VLIVNTNSGGHA+IGFYFAKELLGSGH+V+
Sbjct: 67  NPACSFSVRASAADKKRVLIVNTNSGGHAVIGFYFAKELLGSGHDVT 113


>ref|XP_007199894.1| hypothetical protein PRUPE_ppa006606mg [Prunus persica]
           gi|462395294|gb|EMJ01093.1| hypothetical protein
           PRUPE_ppa006606mg [Prunus persica]
          Length = 403

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 33/43 (76%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
 Frame = -2

Query: 126 SLTINATV-EKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           S +I A+  EKKKVLIVNTN GGHA+IGFYFAKELLGSGH+V+
Sbjct: 66  SFSIKASAGEKKKVLIVNTNGGGHAVIGFYFAKELLGSGHQVT 108


>ref|XP_003536518.1| PREDICTED: chloroplast stem-loop binding protein of 41 kDa a,
           chloroplastic-like [Glycine max]
          Length = 404

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 31/37 (83%), Positives = 34/37 (91%)
 Frame = -2

Query: 111 ATVEKKKVLIVNTNSGGHAIIGFYFAKELLGSGHEVS 1
           +  EKKKVLIVNTNSGGHAIIGFYFAKELLG+GH V+
Sbjct: 73  SAAEKKKVLIVNTNSGGHAIIGFYFAKELLGAGHSVT 109


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