BLASTX nr result

ID: Akebia24_contig00010007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00010007
         (881 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]    64   8e-08
gb|AAT39281.2| Integrase core domain containing protein [Solanum...    63   2e-07
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...    61   5e-07
emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]    60   1e-06
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ...    59   2e-06
emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]    59   2e-06
emb|CAN83877.1| hypothetical protein VITISV_014760 [Vitis vinifera]    57   9e-06
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]    57   9e-06
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia...    57   9e-06

>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score = 63.9 bits (154), Expect = 8e-08
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +3

Query: 552 YSMLRVFGCCCFPYLGPYQTNKVSPKSLPCVFLGHS 659
           YSMLR FGC CFPYL  Y  NK+SPKS PCVFLG+S
Sbjct: 640 YSMLRTFGCLCFPYLRDYSPNKLSPKSTPCVFLGYS 675


>gb|AAT39281.2| Integrase core domain containing protein [Solanum demissum]
          Length = 1760

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
 Frame = +3

Query: 552 YSMLRVFGCCCFPYLGPYQTNKVSPKSLPCVFLGHS-QYLCY----PIR---FLVQTTNR 707
           Y  LRVFGC C+P+L PY  NK+ PKS PCV+LG S ++ C+    P++   +L +    
Sbjct: 660 YESLRVFGCLCYPWLKPYAKNKLEPKSTPCVYLGFSTKHYCHQCFDPVKNKLYLSRDVQF 719

Query: 708 YEANQFMVQLVLGLQNQENHESTDRW 785
            E       + L L+NQ   +STD W
Sbjct: 720 LEDTYPFHNIFLNLKNQ---QSTDSW 742


>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
           polyprotein from Arabidopsis arenosa [Arabidopsis
           thaliana]
          Length = 1194

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 12/87 (13%)
 Frame = +3

Query: 552 YSMLRVFGCCCFPYLGPYQTNKVSPKSLPCVFLGHSQ----YLC--------YPIRFLVQ 695
           Y  LRVFGC CFP+L PY T+K+  +  PCVFLG+SQ    YLC        Y  R +  
Sbjct: 642 YLKLRVFGCLCFPWLRPYTTHKLDDRPAPCVFLGYSQTQSAYLCLNRTTGRVYTSRHVQF 701

Query: 696 TTNRYEANQFMVQLVLGLQNQENHEST 776
             N Y   +  +     L+   NH  T
Sbjct: 702 VENTYPFTKPTLDPFTNLEESNNHSIT 728


>emb|CAN71108.1| hypothetical protein VITISV_001478 [Vitis vinifera]
          Length = 1354

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 4/44 (9%)
 Frame = +3

Query: 552 YSMLRVFGCCCFPYLGPYQTNKVSPKSLPCVFLGH----SQYLC 671
           YS L+VFGC C+P+L PY T+K++P S PCVFLG+    S YLC
Sbjct: 659 YSRLKVFGCLCYPWLRPYXTHKLTPXSKPCVFLGYSLSQSAYLC 702


>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = +3

Query: 552 YSMLRVFGCCCFPYLGPYQTNKVSPKSLPCVFLGHSQ-YLCYPIRFLVQTTNRYEANQFM 728
           Y  LR+FGC CFP L PY  NK+ P+SL CVFLG+S+ Y  Y  R L+  T R   ++ +
Sbjct: 685 YDALRIFGCACFPMLRPYTQNKLDPRSLQCVFLGYSEKYKGY--RCLLPATGRVYISRHV 742

Query: 729 V 731
           +
Sbjct: 743 I 743


>emb|CAN70473.1| hypothetical protein VITISV_037490 [Vitis vinifera]
          Length = 786

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 4/45 (8%)
 Frame = +3

Query: 552 YSMLRVFGCCCFPYLGPYQTNKVSPKSLPCVFLGH----SQYLCY 674
           YS LR+FGC C+P+L PY + K+  +S PC+FLG+    S YLCY
Sbjct: 380 YSKLRIFGCLCYPWLRPYSSRKLESRSKPCIFLGYSLTQSAYLCY 424


>emb|CAN83877.1| hypothetical protein VITISV_014760 [Vitis vinifera]
          Length = 707

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 25/36 (69%), Positives = 27/36 (75%)
 Frame = +3

Query: 552 YSMLRVFGCCCFPYLGPYQTNKVSPKSLPCVFLGHS 659
           YSM R FGC CFPYL  Y  NK+SPKS P VFLG+S
Sbjct: 96  YSMPRTFGCLCFPYLRDYSPNKLSPKSTPYVFLGYS 131


>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
          Length = 1144

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +3

Query: 552 YSMLRVFGCCCFPYLGPYQTNKVSPKSLPCVFLGHSQ 662
           Y  LR FGC C+P   PY T+K+ PKS+PC+FLG+SQ
Sbjct: 633 YLKLRKFGCLCYPLTRPYNTHKLQPKSIPCIFLGYSQ 669


>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7268438|emb|CAB80958.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1474

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
 Frame = +3

Query: 552 YSMLRVFGCCCFPYLGPYQTNKVSPKSLPCVFLGHS----QYLCYPIRFLVQTTNRY 710
           Y  LRVFGC CFP+L PY  NK+  +S  CVFLG+S     YLC+ +      T+R+
Sbjct: 686 YERLRVFGCLCFPWLRPYTHNKLEERSRRCVFLGYSLTQTAYLCFDVEHKRLYTSRH 742


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