BLASTX nr result

ID: Akebia24_contig00009248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00009248
         (273 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo...   138   9e-31
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g...   138   9e-31
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g...   138   9e-31
ref|XP_005646946.1| small nuclear ribo protein F [Coccomyxa sube...   138   9e-31
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo...   138   9e-31
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo...   138   9e-31
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr...   137   1e-30
gb|AFK45150.1| unknown [Lotus japonicus]                              137   1e-30
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo...   137   1e-30
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo...   137   1e-30
gb|ACU13643.1| unknown [Glycine max]                                  137   1e-30
gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indi...   137   1e-30
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A...   137   2e-30
gb|ABK22541.1| unknown [Picea sitchensis]                             137   2e-30
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo...   137   2e-30
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]...   136   3e-30
ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]...   136   3e-30
gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]           136   3e-30
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo...   135   5e-30
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ...   135   5e-30

>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
           italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
           probable small nuclear ribonucleoprotein F-like [Setaria
           italica]
          Length = 86

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
           gi|77552372|gb|ABA95169.1| small nuclear
           ribonucleoprotein F, putative, expressed [Oryza sativa
           Japonica Group] gi|113645618|dbj|BAF28759.1|
           Os11g0657300 [Oryza sativa Japonica Group]
           gi|215693012|dbj|BAG88432.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218186140|gb|EEC68567.1| hypothetical protein
           OsI_36896 [Oryza sativa Indica Group]
           gi|222616369|gb|EEE52501.1| hypothetical protein
           OsJ_34703 [Oryza sativa Japonica Group]
          Length = 86

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
           gi|573918646|ref|XP_006646960.1| PREDICTED: probable
           small nuclear ribonucleoprotein F-like [Oryza
           brachyantha] gi|50252055|dbj|BAD27986.1| putative small
           nuclear ribonucleoprotein polypeptide F [Oryza sativa
           Japonica Group] gi|113535599|dbj|BAF07982.1|
           Os02g0177500 [Oryza sativa Japonica Group]
          Length = 86

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|XP_005646946.1| small nuclear ribo protein F [Coccomyxa subellipsoidea C-169]
           gi|384248919|gb|EIE22402.1| small nuclear ribo protein F
           [Coccomyxa subellipsoidea C-169]
          Length = 85

 Score =  138 bits (347), Expect = 9e-31
 Identities = 63/70 (90%), Positives = 68/70 (97%)
 Frame = -3

Query: 211 MASAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGN 32
           MA+ VPVNPKPFLN LTGKPV++KLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQFTGN
Sbjct: 1   MAATVPVNPKPFLNGLTGKPVIIKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGN 60

Query: 31  LGEILIRCNN 2
           LGE+LIRCNN
Sbjct: 61  LGEVLIRCNN 70


>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
           [Brachypodium distachyon]
          Length = 86

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
           [Brachypodium distachyon]
          Length = 86

 Score =  138 bits (347), Expect = 9e-31
 Identities = 64/68 (94%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 85

 Score =  137 bits (346), Expect = 1e-30
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = -3

Query: 199 VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLGEI 20
           VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLGEI
Sbjct: 3   VPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGEI 62

Query: 19  LIRCNN 2
           LIRCNN
Sbjct: 63  LIRCNN 68


>gb|AFK45150.1| unknown [Lotus japonicus]
          Length = 88

 Score =  137 bits (346), Expect = 1e-30
 Identities = 63/68 (92%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNLG
Sbjct: 2   ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
           gi|593783443|ref|XP_007154762.1| hypothetical protein
           PHAVU_003G145500g [Phaseolus vulgaris]
           gi|561028116|gb|ESW26756.1| hypothetical protein
           PHAVU_003G145500g [Phaseolus vulgaris]
          Length = 88

 Score =  137 bits (346), Expect = 1e-30
 Identities = 63/68 (92%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNLG
Sbjct: 2   ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
           gi|255628071|gb|ACU14380.1| unknown [Glycine max]
          Length = 88

 Score =  137 bits (346), Expect = 1e-30
 Identities = 63/68 (92%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNLG
Sbjct: 2   ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>gb|ACU13643.1| unknown [Glycine max]
          Length = 88

 Score =  137 bits (346), Expect = 1e-30
 Identities = 63/68 (92%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNLG
Sbjct: 2   ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indica Group]
           gi|222622299|gb|EEE56431.1| hypothetical protein
           OsJ_05599 [Oryza sativa Japonica Group]
          Length = 146

 Score =  137 bits (346), Expect = 1e-30
 Identities = 64/66 (96%), Positives = 66/66 (100%)
 Frame = -3

Query: 199 VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLGEI 20
           VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLGEI
Sbjct: 64  VPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGEI 123

Query: 19  LIRCNN 2
           LIRCNN
Sbjct: 124 LIRCNN 129


>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
           gi|548851446|gb|ERN09722.1| hypothetical protein
           AMTR_s00029p00226370 [Amborella trichopoda]
          Length = 86

 Score =  137 bits (345), Expect = 2e-30
 Identities = 64/68 (94%), Positives = 66/68 (97%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQ +GNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQLSGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>gb|ABK22541.1| unknown [Picea sitchensis]
          Length = 84

 Score =  137 bits (345), Expect = 2e-30
 Identities = 63/68 (92%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQFTGNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLG 61

Query: 25  EILIRCNN 2
           E+LIRCNN
Sbjct: 62  EVLIRCNN 69


>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
           vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
           product [Vitis vinifera]
          Length = 88

 Score =  137 bits (344), Expect = 2e-30
 Identities = 63/68 (92%), Positives = 67/68 (98%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VP+NPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN+EEYIDGQFTGNLG
Sbjct: 2   ATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
           gi|194696080|gb|ACF82124.1| unknown [Zea mays]
           gi|195609436|gb|ACG26548.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|195622854|gb|ACG33257.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|195639814|gb|ACG39375.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413926377|gb|AFW66309.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413935832|gb|AFW70383.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413935833|gb|AFW70384.1| small nuclear
           ribonucleoprotein F [Zea mays]
          Length = 86

 Score =  136 bits (343), Expect = 3e-30
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]
           gi|195650409|gb|ACG44672.1| small nuclear
           ribonucleoprotein F [Zea mays]
           gi|413935831|gb|AFW70382.1| small nuclear
           ribonucleoprotein F [Zea mays]
          Length = 107

 Score =  136 bits (342), Expect = 3e-30
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = -3

Query: 199 VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLGEI 20
           VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDGQF+GNLGEI
Sbjct: 25  VPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLGEI 84

Query: 19  LIRCNN 2
           LIRCNN
Sbjct: 85  LIRCNN 90


>gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]
          Length = 86

 Score =  136 bits (342), Expect = 3e-30
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + VPVNPKPFLNNLTGKP++VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2   ATVPVNPKPFLNNLTGKPIIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
           arietinum]
          Length = 88

 Score =  135 bits (341), Expect = 5e-30
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G FTGNLG
Sbjct: 2   ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGSFTGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
           gi|355511167|gb|AES92309.1| Small nuclear
           ribonucleoprotein F [Medicago truncatula]
           gi|388505566|gb|AFK40849.1| unknown [Medicago
           truncatula]
          Length = 88

 Score =  135 bits (341), Expect = 5e-30
 Identities = 62/68 (91%), Positives = 66/68 (97%)
 Frame = -3

Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
           + +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G FTGNLG
Sbjct: 2   ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNLG 61

Query: 25  EILIRCNN 2
           EILIRCNN
Sbjct: 62  EILIRCNN 69


Top