BLASTX nr result
ID: Akebia24_contig00009248
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00009248
(273 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo... 138 9e-31
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g... 138 9e-31
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g... 138 9e-31
ref|XP_005646946.1| small nuclear ribo protein F [Coccomyxa sube... 138 9e-31
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo... 138 9e-31
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo... 138 9e-31
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr... 137 1e-30
gb|AFK45150.1| unknown [Lotus japonicus] 137 1e-30
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo... 137 1e-30
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo... 137 1e-30
gb|ACU13643.1| unknown [Glycine max] 137 1e-30
gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indi... 137 1e-30
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A... 137 2e-30
gb|ABK22541.1| unknown [Picea sitchensis] 137 2e-30
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo... 137 2e-30
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]... 136 3e-30
ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]... 136 3e-30
gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays] 136 3e-30
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo... 135 5e-30
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ... 135 5e-30
>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
probable small nuclear ribonucleoprotein F-like [Setaria
italica]
Length = 86
Score = 138 bits (347), Expect = 9e-31
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2 ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
gi|77552372|gb|ABA95169.1| small nuclear
ribonucleoprotein F, putative, expressed [Oryza sativa
Japonica Group] gi|113645618|dbj|BAF28759.1|
Os11g0657300 [Oryza sativa Japonica Group]
gi|215693012|dbj|BAG88432.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218186140|gb|EEC68567.1| hypothetical protein
OsI_36896 [Oryza sativa Indica Group]
gi|222616369|gb|EEE52501.1| hypothetical protein
OsJ_34703 [Oryza sativa Japonica Group]
Length = 86
Score = 138 bits (347), Expect = 9e-31
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2 ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
gi|573918646|ref|XP_006646960.1| PREDICTED: probable
small nuclear ribonucleoprotein F-like [Oryza
brachyantha] gi|50252055|dbj|BAD27986.1| putative small
nuclear ribonucleoprotein polypeptide F [Oryza sativa
Japonica Group] gi|113535599|dbj|BAF07982.1|
Os02g0177500 [Oryza sativa Japonica Group]
Length = 86
Score = 138 bits (347), Expect = 9e-31
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2 ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|XP_005646946.1| small nuclear ribo protein F [Coccomyxa subellipsoidea C-169]
gi|384248919|gb|EIE22402.1| small nuclear ribo protein F
[Coccomyxa subellipsoidea C-169]
Length = 85
Score = 138 bits (347), Expect = 9e-31
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = -3
Query: 211 MASAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGN 32
MA+ VPVNPKPFLN LTGKPV++KLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQFTGN
Sbjct: 1 MAATVPVNPKPFLNGLTGKPVIIKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGN 60
Query: 31 LGEILIRCNN 2
LGE+LIRCNN
Sbjct: 61 LGEVLIRCNN 70
>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 138 bits (347), Expect = 9e-31
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2 ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 138 bits (347), Expect = 9e-31
Identities = 64/68 (94%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2 ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
sativa Japonica Group]
Length = 85
Score = 137 bits (346), Expect = 1e-30
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = -3
Query: 199 VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLGEI 20
VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLGEI
Sbjct: 3 VPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGEI 62
Query: 19 LIRCNN 2
LIRCNN
Sbjct: 63 LIRCNN 68
>gb|AFK45150.1| unknown [Lotus japonicus]
Length = 88
Score = 137 bits (346), Expect = 1e-30
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNLG
Sbjct: 2 ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|593783443|ref|XP_007154762.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
gi|561028116|gb|ESW26756.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
Length = 88
Score = 137 bits (346), Expect = 1e-30
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNLG
Sbjct: 2 ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|255628071|gb|ACU14380.1| unknown [Glycine max]
Length = 88
Score = 137 bits (346), Expect = 1e-30
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNLG
Sbjct: 2 ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>gb|ACU13643.1| unknown [Glycine max]
Length = 88
Score = 137 bits (346), Expect = 1e-30
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+GQFTGNLG
Sbjct: 2 ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indica Group]
gi|222622299|gb|EEE56431.1| hypothetical protein
OsJ_05599 [Oryza sativa Japonica Group]
Length = 146
Score = 137 bits (346), Expect = 1e-30
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = -3
Query: 199 VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLGEI 20
VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF+GNLGEI
Sbjct: 64 VPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGEI 123
Query: 19 LIRCNN 2
LIRCNN
Sbjct: 124 LIRCNN 129
>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
gi|548851446|gb|ERN09722.1| hypothetical protein
AMTR_s00029p00226370 [Amborella trichopoda]
Length = 86
Score = 137 bits (345), Expect = 2e-30
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQ +GNLG
Sbjct: 2 ATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQLSGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>gb|ABK22541.1| unknown [Picea sitchensis]
Length = 84
Score = 137 bits (345), Expect = 2e-30
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDGQFTGNLG
Sbjct: 2 ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLG 61
Query: 25 EILIRCNN 2
E+LIRCNN
Sbjct: 62 EVLIRCNN 69
>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
product [Vitis vinifera]
Length = 88
Score = 137 bits (344), Expect = 2e-30
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VP+NPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN+EEYIDGQFTGNLG
Sbjct: 2 ATVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
gi|194696080|gb|ACF82124.1| unknown [Zea mays]
gi|195609436|gb|ACG26548.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195622854|gb|ACG33257.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195639814|gb|ACG39375.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413926377|gb|AFW66309.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935832|gb|AFW70383.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935833|gb|AFW70384.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 86
Score = 136 bits (343), Expect = 3e-30
Identities = 63/68 (92%), Positives = 66/68 (97%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2 ATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]
gi|195650409|gb|ACG44672.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935831|gb|AFW70382.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 107
Score = 136 bits (342), Expect = 3e-30
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = -3
Query: 199 VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLGEI 20
VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDGQF+GNLGEI
Sbjct: 25 VPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLGEI 84
Query: 19 LIRCNN 2
LIRCNN
Sbjct: 85 LIRCNN 90
>gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]
Length = 86
Score = 136 bits (342), Expect = 3e-30
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ VPVNPKPFLNNLTGKP++VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDGQF+GNLG
Sbjct: 2 ATVPVNPKPFLNNLTGKPIIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
arietinum]
Length = 88
Score = 135 bits (341), Expect = 5e-30
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G FTGNLG
Sbjct: 2 ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGSFTGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69
>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
gi|355511167|gb|AES92309.1| Small nuclear
ribonucleoprotein F [Medicago truncatula]
gi|388505566|gb|AFK40849.1| unknown [Medicago
truncatula]
Length = 88
Score = 135 bits (341), Expect = 5e-30
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = -3
Query: 205 SAVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFTGNLG 26
+ +PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G FTGNLG
Sbjct: 2 ATIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNLG 61
Query: 25 EILIRCNN 2
EILIRCNN
Sbjct: 62 EILIRCNN 69