BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00007277
         (1912 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37517.3| unnamed protein product [Vitis vinifera]              833   0.0  
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   833   0.0  
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   792   0.0  
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca...   780   0.0  
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...   777   0.0  
ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Popu...   772   0.0  
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   770   0.0  
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   767   0.0  
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   752   0.0  
gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus...   739   0.0  
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   738   0.0  
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise...   736   0.0  
ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [The...   727   0.0  
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   709   0.0  
ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [A...   702   0.0  
ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   698   0.0  
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   698   0.0  
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|...   694   0.0  
ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   692   0.0  
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   691   0.0  

>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  833 bits (2151), Expect = 0.0
 Identities = 402/556 (72%), Positives = 439/556 (78%), Gaps = 3/556 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LLDPG GLWRNPS+GGHDDKAHPPIHPT FS GESGWSQDH RLYELVVRHFLAC
Sbjct: 38   SYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHFLAC 97

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPAVG ET VEIDIAGE FS+SGRVIIAKNYLDVYRFESWGGSMIP Y+FGQQF PTT
Sbjct: 98   VSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIPTT 157

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDSGVTR            CMDKAGIGTDATMHDHIKKLLDRFYATKD+NTRFSPTNL
Sbjct: 158  LTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTNL 217

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKR++EVL TCL+QMKACFLDAR+N+
Sbjct: 218  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDARLNK 277

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
            VKLLEAMA+FF+RSNR  GDEQ  VGD+VR C  C ESDM L+++PDG FMVGCLG+PQC
Sbjct: 278  VKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCLGYPQC 337

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RNVVWLPGS SEAA+TT  CN CTPGPV+ IQ KFR++EIPPNY+ DHLGC+ GCDE LR
Sbjct: 338  RNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDEILR 397

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXXX 1261
            QL EIC TGSR      +ARGRG   SS+NA R +TRQ+ACIHC QTGHSSNDC      
Sbjct: 398  QLTEICGTGSR-----ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPR 452

Query: 1262 XXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSIN 1441
                         GE+SIPCN+CGTPC +RTANT NN+GRKFYSCQ +ECNFFVWEDS+N
Sbjct: 453  SRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLN 512

Query: 1442 NSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ--NTIDAMFVSATGDPISG-RCY 1612
            +S+ G                                   T D  FVSATGDP+SG RC+
Sbjct: 513  SSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSGRRCF 572

Query: 1613 VCGDPSHFANVCPNRG 1660
            VCGDPSHFANVCPNRG
Sbjct: 573  VCGDPSHFANVCPNRG 588


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  833 bits (2151), Expect = 0.0
 Identities = 402/556 (72%), Positives = 439/556 (78%), Gaps = 3/556 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LLDPG GLWRNPS+GGHDDKAHPPIHPT FS GESGWSQDH RLYELVVRHFLAC
Sbjct: 363  SYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHFLAC 422

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPAVG ET VEIDIAGE FS+SGRVIIAKNYLDVYRFESWGGSMIP Y+FGQQF PTT
Sbjct: 423  VSQPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIPTT 482

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDSGVTR            CMDKAGIGTDATMHDHIKKLLDRFYATKD+NTRFSPTNL
Sbjct: 483  LTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTNL 542

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKR++EVL TCL+QMKACFLDAR+N+
Sbjct: 543  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDARLNK 602

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
            VKLLEAMA+FF+RSNR  GDEQ  VGD+VR C  C ESDM L+++PDG FMVGCLG+PQC
Sbjct: 603  VKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCLGYPQC 662

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RNVVWLPGS SEAA+TT  CN CTPGPV+ IQ KFR++EIPPNY+ DHLGC+ GCDE LR
Sbjct: 663  RNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNYNIDHLGCVCGCDEILR 722

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXXX 1261
            QL EIC TGSR      +ARGRG   SS+NA R +TRQ+ACIHC QTGHSSNDC      
Sbjct: 723  QLTEICGTGSR-----ISARGRGSNASSTNAQRSNTRQTACIHCSQTGHSSNDCPSRVPR 777

Query: 1262 XXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSIN 1441
                         GE+SIPCN+CGTPC +RTANT NN+GRKFYSCQ +ECNFFVWEDS+N
Sbjct: 778  SRNSQSHRTNMPSGESSIPCNVCGTPCILRTANTENNRGRKFYSCQSQECNFFVWEDSLN 837

Query: 1442 NSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ--NTIDAMFVSATGDPISG-RCY 1612
            +S+ G                                   T D  FVSATGDP+SG RC+
Sbjct: 838  SSSGGRSAQPATARSSASNPSRRGGRGRGDRGRGRQSGARTSDTTFVSATGDPVSGRRCF 897

Query: 1613 VCGDPSHFANVCPNRG 1660
            VCGDPSHFANVCPNRG
Sbjct: 898  VCGDPSHFANVCPNRG 913


>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  792 bits (2045), Expect = 0.0
 Identities = 384/553 (69%), Positives = 426/553 (77%), Gaps = 1/553 (0%)
 Frame = +2

Query: 5    YAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLACV 184
            YAQ+LLDP +GLWRNPS GGHDDKAHPPIHPT FS GE+ WSQDH R+YELVVRHFLACV
Sbjct: 374  YAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHHRVYELVVRHFLACV 433

Query: 185  SQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTL 364
            SQPAVG ET VEIDIAGE FSA GRVI+AKNYLDVYRFESWGGS+IP Y FGQQFTPTTL
Sbjct: 434  SQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTYSFGQQFTPTTL 493

Query: 365  TLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLG 544
            TLDSGVTR            CMDKAGIGTDATMHDHIKKLLDRFYA KD+NTRFSPT LG
Sbjct: 494  TLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPTKLG 553

Query: 545  EALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNRV 724
            EALVMGYDDMGYELWKPYLR+MMECDMKAVSIGTKRK+EVLETCLQQMKACF DAR N+ 
Sbjct: 554  EALVMGYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLETCLQQMKACFSDARTNKG 613

Query: 725  KLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCR 904
            KLLEAMAIFF+RSNR  G EQ  VGD+VR CG C ESDM L+Q+PDG FMVGCLG+PQCR
Sbjct: 614  KLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPDGNFMVGCLGYPQCR 673

Query: 905  NVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQ 1084
            NVVWLPGS SEA+VT   C SC+PGPVF IQ KFR++EIPPNY   HLGCIGGCD+ LRQ
Sbjct: 674  NVVWLPGSVSEASVTENTCTSCSPGPVFKIQFKFRRLEIPPNYSVQHLGCIGGCDDILRQ 733

Query: 1085 LIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTR-QSACIHCRQTGHSSNDCXXXXXX 1261
            L+EIC TGSRN     + RGRG  T+SS+A RG++R QS+C +CRQTGH SNDC      
Sbjct: 734  LVEICGTGSRNN-SNTSGRGRGNPTASSSAQRGNSRAQSSCAYCRQTGHLSNDC--PSQA 790

Query: 1262 XXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSIN 1441
                         GE+SIPCN CG PC +RTANTANN+GRKF+SCQ +ECNFFVWED++N
Sbjct: 791  SRGRTARAQEVDNGESSIPCNSCGAPCILRTANTANNRGRKFFSCQSQECNFFVWEDNLN 850

Query: 1442 NSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISGRCYVCG 1621
               A                                 ++ +  FVSATG+PI+GRC++CG
Sbjct: 851  GGRA--------ERANTSASTSSGRGGRGRGRGQSGAHSSNVSFVSATGEPITGRCFICG 902

Query: 1622 DPSHFANVCPNRG 1660
            DP HFANVCP RG
Sbjct: 903  DPGHFANVCPRRG 915


>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
            gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
            1 [Theobroma cacao]
          Length = 914

 Score =  780 bits (2013), Expect = 0.0
 Identities = 377/554 (68%), Positives = 418/554 (75%), Gaps = 1/554 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LLDPGT LWRNPS GGHDDKAHPPIHPT FS GE  WSQDH +LYELVVRHFLAC
Sbjct: 367  SYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYELVVRHFLAC 426

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPAVG ETTVEIDIA E FS SGRVI+ +NYLDVYR+ESWGGSMIP Y  GQQF PT+
Sbjct: 427  VSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQFIPTS 486

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLD+GVTR            CMDKAGIGTDATMHDHIKKLLDRFYATKD+NTRFSPT L
Sbjct: 487  LTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTKL 546

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKP LRSMME DMK VS+G KRK EVL TCLQQMKACFLDAR+N+
Sbjct: 547  GEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLDARLNK 606

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
            VKLLEAMA+FF+RSN+  GD+  V G++VR CG C ES M LK+  DG FMVGCLGFPQC
Sbjct: 607  VKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCLGFPQC 666

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RN +WLPGS  EAAVT+ +C SC PGPV++IQ KFRQ+EIPP ++ +HLGCIGGCD+ LR
Sbjct: 667  RNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCIGGCDDILR 726

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXXX 1261
            QLIEIC TGSR +     ARGRG TT+SSN  R S+RQ AC++C+QTGHSSNDC      
Sbjct: 727  QLIEICGTGSRMS-----ARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFSG 781

Query: 1262 XXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSIN 1441
                         GE S+ C+ CGTPC +RTANTANN+GRKFYSC  +ECNFF+WED  N
Sbjct: 782  SRNSRSRTSSQN-GEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQECNFFIWEDEHN 840

Query: 1442 NSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISGR-CYVC 1618
            N T G                               +   D  FVSATGDPISGR CYVC
Sbjct: 841  NGTGGRSIPRAGINGSASNSSRGGGRGRGRFGQNGAR-AADVTFVSATGDPISGRRCYVC 899

Query: 1619 GDPSHFANVCPNRG 1660
            GDPSHFANVCPNRG
Sbjct: 900  GDPSHFANVCPNRG 913


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
            vesca]
          Length = 908

 Score =  777 bits (2006), Expect = 0.0
 Identities = 375/554 (67%), Positives = 415/554 (74%), Gaps = 1/554 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LLDP +GLWRNPS GGHDDKAHPPIHPT FS GES WSQDH RLYELVVRHFLAC
Sbjct: 364  SYAQRLLDPASGLWRNPSSGGHDDKAHPPIHPTKFSAGESNWSQDHNRLYELVVRHFLAC 423

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPAVG ETTVEIDIAGE+FSASGRVI+AKNYLDVYRFESWGGS++P Y  GQQF PTT
Sbjct: 424  VSQPAVGAETTVEIDIAGEMFSASGRVILAKNYLDVYRFESWGGSLLPTYAVGQQFMPTT 483

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDSGVTR            CMDK GIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL
Sbjct: 484  LTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 543

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGY+LWKPYLR++ME DMKAVS G K K+EVLETCLQQMK CFLDAR N+
Sbjct: 544  GEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQMKGCFLDARQNK 603

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
            VKL EAMA+FF+RSNRPGGD+Q   G+ +R CG C E+DM L++  DG FMVGC+G+PQC
Sbjct: 604  VKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADMVLRKNRDGNFMVGCMGYPQC 663

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RN +WLPGS SEA  TT +CNSCTPGPV +IQ  FR++EIPPNY T+HLGCIGGCDE LR
Sbjct: 664  RNAIWLPGSVSEAVATTNICNSCTPGPVHLIQFTFRRLEIPPNYSTNHLGCIGGCDEILR 723

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXXX 1261
            QL EIC TGSR     +AARGRG TT SSN  + +TRQ ACI+C Q+GHSS DC      
Sbjct: 724  QLTEICGTGSR-----SAARGRGPTT-SSNVQQNNTRQGACIYCHQSGHSSGDCPSQSSG 777

Query: 1262 XXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSIN 1441
                         GE S+ C  CG PC +RTANT  N+GRKFY C  +ECNFFVWED+++
Sbjct: 778  PRSVRPRTMNAQSGEISVSCTTCGAPCVLRTANTTQNRGRKFYKCPSQECNFFVWEDNVS 837

Query: 1442 NSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISG-RCYVC 1618
            N   G                                 T    FVSATGDP SG RC+VC
Sbjct: 838  NGNGGRGFQRANVSAGRGAGGRGSGGRGAQGAGHATGGT----FVSATGDPNSGRRCFVC 893

Query: 1619 GDPSHFANVCPNRG 1660
            GDPSHFANVCPNRG
Sbjct: 894  GDPSHFANVCPNRG 907


>ref|XP_002307047.1| hypothetical protein POPTR_0005s06810g [Populus trichocarpa]
            gi|222856496|gb|EEE94043.1| hypothetical protein
            POPTR_0005s06810g [Populus trichocarpa]
          Length = 910

 Score =  772 bits (1994), Expect = 0.0
 Identities = 375/555 (67%), Positives = 418/555 (75%), Gaps = 1/555 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LLDPG GLWRNPS+GGHDDKAHPPIHPT FS GES WSQDH RLYELVVRHFLAC
Sbjct: 364  SYAQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESRWSQDHHRLYELVVRHFLAC 423

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPAVG ET VEIDIAGE FSASGRVI+AKNYLDVYRFESWG SMIP Y+ GQQF P T
Sbjct: 424  VSQPAVGAETVVEIDIAGERFSASGRVILAKNYLDVYRFESWGDSMIPTYLQGQQFIPAT 483

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDSGVTR            CMDKAGIGTDATMHDHIKKLLDRFY TKDANTRFSPTNL
Sbjct: 484  LTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYVTKDANTRFSPTNL 543

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKP LRS+MECDMK VS+G K K+EVL TCLQQMKACFLDA+VN+
Sbjct: 544  GEALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEVLATCLQQMKACFLDAKVNK 603

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
            VKLLEAMAIFF+RS+R  GD+ S +G+ VRPCG C E++M LK+  DG FMVGC GFPQC
Sbjct: 604  VKLLEAMAIFFNRSDRSNGDDSSALGENVRPCGLCQEANMVLKKNRDGNFMVGCSGFPQC 663

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RN VWLPG   EA +T  +CNSCTPGPV++IQ KFRQ+EIPP ++ +HLGCIGGCDETLR
Sbjct: 664  RNAVWLPGPVLEATITNNICNSCTPGPVYLIQFKFRQLEIPPGFNVNHLGCIGGCDETLR 723

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXXX 1261
            QLIEIC TGSR    V    G   TT+ SN  R ++RQ+ CI+C QTGH+S DC      
Sbjct: 724  QLIEICGTGSR----VQGGNG-PPTTTPSNPQRSNSRQAPCIYCYQTGHASTDCPSRISA 778

Query: 1262 XXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSIN 1441
                         GE+SIPC+ CGTPC +RTANTANN+GRKFYSC  + CNFFVWED++N
Sbjct: 779  TRHVQSHGMNQQNGESSIPCSTCGTPCVLRTANTANNRGRKFYSCSSQACNFFVWEDNLN 838

Query: 1442 NSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISG-RCYVC 1618
            N +A                                    D  FVSATG+PISG RC+VC
Sbjct: 839  NGSA---PRSAPRPNMSNSASNPSRRGGRGRGVQNAGRAADVTFVSATGEPISGRRCFVC 895

Query: 1619 GDPSHFANVCPNRGT 1663
            GDPSHFAN CP+RG+
Sbjct: 896  GDPSHFANACPSRGS 910


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score =  770 bits (1988), Expect = 0.0
 Identities = 374/556 (67%), Positives = 420/556 (75%), Gaps = 4/556 (0%)
 Frame = +2

Query: 5    YAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLACV 184
            YAQ+LLDP  GLWRNP  GGHDDKAHPPIHPT FS GESGWSQDH +LYELVVRHFLACV
Sbjct: 369  YAQRLLDPEAGLWRNPRGGGHDDKAHPPIHPTKFSAGESGWSQDHRKLYELVVRHFLACV 428

Query: 185  SQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTL 364
            S+PAVG ETTVEIDIAGELFSA GRVI+ KNYLDVY++ESWGGS+IP Y  GQQF PTTL
Sbjct: 429  SKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYQYESWGGSIIPTYTIGQQFIPTTL 488

Query: 365  TLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLG 544
            TLDSGVTR            CMDK GIGTDATMHDHIKKLLDRFYATKDA+ RF+PTNLG
Sbjct: 489  TLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDASMRFTPTNLG 548

Query: 545  EALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNRV 724
            EALVMGYDDMGY+LWKPYLR++ME DMK+VS GTK K+EVL+T LQQMKACFLDAR+N+V
Sbjct: 549  EALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQMKACFLDARLNKV 608

Query: 725  KLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCR 904
            KLLEAM IFF+RSNR GG+EQ+ +G++VR CG C ESDM LK+  DG FMVGCLGFPQCR
Sbjct: 609  KLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDGNFMVGCLGFPQCR 668

Query: 905  NVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQ 1084
            N VWLPGS SEA VTT  C++CTPGPV+ IQ KFRQ+EIPPNYD +HLGCIGGCDE L Q
Sbjct: 669  NAVWLPGSVSEAVVTTNTCSNCTPGPVYRIQFKFRQLEIPPNYDVNHLGCIGGCDEILTQ 728

Query: 1085 LIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXXXX 1264
            L EIC TG R       AR RG TTS+ NAH  + RQ+ C++C++TGHSSNDC       
Sbjct: 729  LTEICGTGPRMP-----ARPRGPTTSTGNAHHTNPRQAVCMNCQETGHSSNDCPSQTLRS 783

Query: 1265 XXXXXXXXXXXX--GETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSI 1438
                          GE S+ CN CGTPC +RTANTANN+GRKFYSC  +ECNFFVWED +
Sbjct: 784  RNARQHGNVMNQQSGEASVSCNSCGTPCVLRTANTANNRGRKFYSCPSQECNFFVWEDDL 843

Query: 1439 NNSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QNTIDAMFVSATGDPISGR-CY 1612
            N+ T G                                 ++ +  FVSATGDPISGR C+
Sbjct: 844  NSGTGGGSFTRSNSIPTSNRGRNGRNGGRGARGRGRNASSSSNVTFVSATGDPISGRRCF 903

Query: 1613 VCGDPSHFANVCPNRG 1660
            VCGDPSHFANVCPNRG
Sbjct: 904  VCGDPSHFANVCPNRG 919


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score =  767 bits (1980), Expect = 0.0
 Identities = 374/554 (67%), Positives = 418/554 (75%), Gaps = 1/554 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            +YAQ+LLDP +GLWRNPS GGHDDKAHPPIHPT FS GE+ WSQDH R+YELVVRHFLAC
Sbjct: 373  TYAQRLLDPQSGLWRNPSGGGHDDKAHPPIHPTKFSAGETRWSQDHHRVYELVVRHFLAC 432

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPAVG ET VEIDIAGE FSA GRVI+AKNYLDVYRFESWGGS+IP Y FGQQFTPTT
Sbjct: 433  VSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTYSFGQQFTPTT 492

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDSGV R            CMDKAGIGTDATMHDHIKKLLDRFYA KD+NTRFSPT L
Sbjct: 493  LTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPTKL 552

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKPYLR+MMECDMKAVS GTKRK+EVLETCLQQMKACF DAR N+
Sbjct: 553  GEALVMGYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLETCLQQMKACFSDARTNK 612

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
             KLLEAMAIFF+RSNR    EQ  VG +VR CG C ESDM L+Q+PDG FMVGCLG+PQC
Sbjct: 613  EKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQKPDGNFMVGCLGYPQC 672

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RNVVWLPGS SEA+VT   C +C+PGPVF IQ KFRQ EIPP+Y   HLGCIGGCD+ LR
Sbjct: 673  RNVVWLPGSVSEASVTENTCITCSPGPVFKIQFKFRQQEIPPDYSVQHLGCIGGCDDILR 732

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTR-QSACIHCRQTGHSSNDCXXXXX 1258
            QL+EIC TGSRN      +RGRG  T+ S+A R ++R QS+C +CRQTGH SNDC     
Sbjct: 733  QLVEICGTGSRN------SRGRGNPTAFSSAQRDNSRAQSSCAYCRQTGHLSNDC--PSQ 784

Query: 1259 XXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSI 1438
                          GE+S+PCN CG PC +RTANTANN+GRKF+SCQ  ECNFFVWED++
Sbjct: 785  ASRDRTARAQEVDNGESSMPCNSCGAPCILRTANTANNRGRKFFSCQSSECNFFVWEDNL 844

Query: 1439 NNSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISGRCYVC 1618
            +   A                                 ++ +  FVSATG+PI+ RC++C
Sbjct: 845  SGGRA--------ERANTSASTSSGRGGRGRGRGQSGAHSSNVSFVSATGEPITVRCFIC 896

Query: 1619 GDPSHFANVCPNRG 1660
            GDP HFANVCP RG
Sbjct: 897  GDPGHFANVCPRRG 910


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  752 bits (1942), Expect = 0.0
 Identities = 371/554 (66%), Positives = 411/554 (74%), Gaps = 1/554 (0%)
 Frame = +2

Query: 5    YAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLACV 184
            YAQ+LLD   GLWRNP  GGHDDKAHPPIHPT FS+GES WSQDH +LYELVVRHFLACV
Sbjct: 400  YAQRLLDHAAGLWRNPGSGGHDDKAHPPIHPTKFSSGESRWSQDHYKLYELVVRHFLACV 459

Query: 185  SQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTL 364
            SQPAVG ET VEI+IAGE+FS SGRVI+AKNYLDVYRFESWGG +IP Y+ GQQF PTTL
Sbjct: 460  SQPAVGAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIPTYVHGQQFIPTTL 519

Query: 365  TLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLG 544
            TLDSGVTR            CMDKAGIGTDATMHDHIKKLLDRFYA KDANTRF+PTN+G
Sbjct: 520  TLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDANTRFAPTNIG 579

Query: 545  EALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNRV 724
            EALVMGYDDMGYELWKP LRSMME DMK VS+G K K++VL  CLQQMKACFLDAR+ +V
Sbjct: 580  EALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQMKACFLDARLKKV 639

Query: 725  KLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQCR 904
            KLLEAM IFF+RS   GG++Q   G++VR CG C ES+M LK+  DG  MVGCL FPQCR
Sbjct: 640  KLLEAMGIFFERS---GGEDQQAAGEVVRQCGICQESNMVLKKSRDGNLMVGCLAFPQCR 696

Query: 905  NVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLRQ 1084
            N VWLPGS SEAAVTT  CNSCTPGPV++IQ KFRQ EIPP ++ +HLGCIGGCDETLRQ
Sbjct: 697  NAVWLPGSVSEAAVTTNTCNSCTPGPVYLIQFKFRQHEIPPGFNVNHLGCIGGCDETLRQ 756

Query: 1085 LIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXXXX 1264
            LIEIC TGSR  +P   ARGRG T SS+N  + + RQ ACI+C+Q GHSS+DC       
Sbjct: 757  LIEICGTGSR--IP---ARGRGPTASSNNGQQSNHRQRACIYCQQMGHSSSDCPSQFSGS 811

Query: 1265 XXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSINN 1444
                        GE+SI C  CGTPC +RTANTANN+GRKFYSC  +ECNFFVWED   N
Sbjct: 812  RNARANGMNPQSGESSIQCTTCGTPCVLRTANTANNRGRKFYSCSSQECNFFVWEDDAKN 871

Query: 1445 STAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISG-RCYVCG 1621
             T                                  NT    FVSATGDPISG RCYVCG
Sbjct: 872  GT----RRMPQAGVSGSASNPSQRGGRGRGGQSRGHNT-GMTFVSATGDPISGRRCYVCG 926

Query: 1622 DPSHFANVCPNRGT 1663
            +PSHFAN CPNRG+
Sbjct: 927  EPSHFANACPNRGS 940


>gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus guttatus]
          Length = 923

 Score =  739 bits (1908), Expect = 0.0
 Identities = 358/556 (64%), Positives = 412/556 (74%), Gaps = 3/556 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LLDP  GLWRNPS GGHDDKAHPPIHPT FS GESGWSQDH ++YELVVRHFLAC
Sbjct: 374  SYAQRLLDPEAGLWRNPSSGGHDDKAHPPIHPTKFSAGESGWSQDHHKVYELVVRHFLAC 433

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPA+G  TTV+IDIAGE FSASG VI+AKNYLDVYRFE+WGGSMIP Y +GQQFTPTT
Sbjct: 434  VSQPAIGAVTTVDIDIAGEQFSASGTVILAKNYLDVYRFETWGGSMIPTYNYGQQFTPTT 493

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDSGVTR            CMD AGIGTDATMHDHIKKLLDRFYATKD+N RFSPT L
Sbjct: 494  LTLDSGVTRPPPLLSEADLLSCMDNAGIGTDATMHDHIKKLLDRFYATKDSNMRFSPTKL 553

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALV GYDDMGYELWKP LR+MME DMKAVS+GTKRKSEVL++CLQQMKACF+DAR+N+
Sbjct: 554  GEALVKGYDDMGYELWKPNLRAMMESDMKAVSMGTKRKSEVLDSCLQQMKACFVDARLNK 613

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
             KL EAM +FF+RSNR  G+EQ  +G++VR CG C ESDM L+++PDG FMVGCLG+PQC
Sbjct: 614  EKLFEAMDVFFERSNRANGNEQQAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCLGYPQC 673

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RNVVWLPGS SEA VTT +C++C+PGPV+MIQ KFR++EIPPNY+ DHLGCIGGCD+TLR
Sbjct: 674  RNVVWLPGSVSEATVTTTICSTCSPGPVYMIQFKFRRLEIPPNYNVDHLGCIGGCDDTLR 733

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTG---HSSNDCXXX 1252
            QL+EIC TGSR T  V   RG+G T+SSS+A + + R         +     S +     
Sbjct: 734  QLVEICGTGSRTTSSV-PGRGQGHTSSSSSAQQSNYRDQGAWQTASSAWQTASGSHPSQS 792

Query: 1253 XXXXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWED 1432
                            GE+SIPC  CG  C++RTANT  NKGRKFYSCQ + C+FFVWED
Sbjct: 793  SRGRSARSQRAGGAPDGESSIPCTSCGASCNLRTANTEANKGRKFYSCQAQGCSFFVWED 852

Query: 1433 SINNSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISGRCY 1612
            +IN+                                     T D  FVSATG+PISGRC+
Sbjct: 853  NINSGGTAARGGGGRSASTTSRRGGRGRGSRGGG------RTNDVAFVSATGEPISGRCF 906

Query: 1613 VCGDPSHFANVCPNRG 1660
            VCG+P HF+NVCP RG
Sbjct: 907  VCGEPGHFSNVCPCRG 922


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  738 bits (1904), Expect = 0.0
 Identities = 368/567 (64%), Positives = 413/567 (72%), Gaps = 14/567 (2%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            +YAQ+LLDP + LWRNPS GGHDDKAHPPIHPT FS GE GWSQDH RLYELVVRHFLAC
Sbjct: 369  AYAQRLLDPESRLWRNPSGGGHDDKAHPPIHPTKFSAGERGWSQDHHRLYELVVRHFLAC 428

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRV-IIAKNYLDVYRFESWGGSMIPKYIFGQQFTPT 358
            VSQPAVG  TTVEIDIAGELFS S R   I +NYLDVYRFESWGGS IP Y+ GQQF PT
Sbjct: 429  VSQPAVGAVTTVEIDIAGELFSTSKRANSILRNYLDVYRFESWGGSTIPTYVSGQQFVPT 488

Query: 359  TLTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTN 538
            TLTLDSGVTR            CMDK GIGTDATMHDHIKKLLDRFYATKDANTRF+PTN
Sbjct: 489  TLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTN 548

Query: 539  LGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVN 718
            LGEALVMGYDDMGY LWKP LR++ME +MKAVS GTKRK EVL +CLQQMK CFLDARVN
Sbjct: 549  LGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLASCLQQMKTCFLDARVN 608

Query: 719  RVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQ 898
            + KLLEAM +FF+RSN  GGDE   VG++V+ CG C +SDM LK+  DG +MVGCLGFPQ
Sbjct: 609  KQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRDGNYMVGCLGFPQ 668

Query: 899  CRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETL 1078
            CRNVVWLPGS +EA VT+  C  CTPGPV++IQ KFRQ+EIPPNY+ +HLGC+GGCD+ L
Sbjct: 669  CRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNYNANHLGCVGGCDDIL 728

Query: 1079 RQLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXX 1258
            RQL EIC TGSR      +ARGRG  TSSSN  R +  QS CI C+Q GHSSNDC     
Sbjct: 729  RQLTEICGTGSR-----VSARGRG--TSSSNVQRDNPGQSVCIFCQQVGHSSNDC----P 777

Query: 1259 XXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSI 1438
                          GE+S+ C+ CG+PC +RTANTANN+GRKFY CQ +ECNFFVWED++
Sbjct: 778  SQSVGSRSAQRRQSGESSVSCSSCGSPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNV 837

Query: 1439 NNS------------TAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSA 1582
            +N             ++G                               Q  I A FVSA
Sbjct: 838  DNGNGGNSVQRSNVRSSGSAPSNLNPGQNTGRGRGRGRGRGRDRDRDRGQGQIAATFVSA 897

Query: 1583 TGDPISG-RCYVCGDPSHFANVCPNRG 1660
            TG+PIS  RC+VCGDPSHFANVCPNRG
Sbjct: 898  TGEPISDRRCFVCGDPSHFANVCPNRG 924


>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
          Length = 813

 Score =  736 bits (1900), Expect = 0.0
 Identities = 358/554 (64%), Positives = 409/554 (73%), Gaps = 2/554 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LLDP TGLW+NP  GGHDDKAHPPIHPT FS+GESGWSQDH ++YELVVRHFLAC
Sbjct: 272  SYAQRLLDPETGLWKNPGAGGHDDKAHPPIHPTKFSSGESGWSQDHHKVYELVVRHFLAC 331

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPA+G ETTVEIDIA E FSASGR IIAKNYLDVYRFE WGGS+IP Y +GQQF PTT
Sbjct: 332  VSQPAIGAETTVEIDIASEQFSASGRAIIAKNYLDVYRFEKWGGSLIPAYAYGQQFIPTT 391

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDSGVTR            CMDKAGIGTDATMHDHIKKLLDR YATKD+NTRFSPT L
Sbjct: 392  LTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRCYATKDSNTRFSPTKL 451

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKP+LR+MME DMK+VS+GTKRK EVLE CLQQMKACFLDAR N+
Sbjct: 452  GEALVMGYDDMGYELWKPHLRAMMESDMKSVSMGTKRKGEVLEACLQQMKACFLDARANK 511

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
             KL EAM +FF+RSNR    +Q + GDIVR CG C ESDM L+++PDG FMVGCLG+PQC
Sbjct: 512  EKLFEAMGVFFERSNRSQTADQHMSGDIVRKCGLCQESDMVLRKKPDGNFMVGCLGYPQC 571

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RNVVWLPGS S A+VTT VC++C+PGPV+MIQ KFRQ+EIPPNY+ DHLGC+GGCD  LR
Sbjct: 572  RNVVWLPGSVSSASVTTVVCSTCSPGPVYMIQFKFRQLEIPPNYNVDHLGCVGGCDSVLR 631

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAH--RGSTRQSACIHCRQTGHSSNDCXXXX 1255
            QL+EIC TGSR+   V    G+GQT+SSS  H   G+ R     H   TG SS       
Sbjct: 632  QLVEICGTGSRSNSNV-PGTGQGQTSSSSFNHPQHGNLRNRGAAHPTTTGRSS------- 683

Query: 1256 XXXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDS 1435
                           GE+S+PC  CG PC++RTANTA N+GR+FYSCQ + CNFFVW+D 
Sbjct: 684  -ARHPSPSSTTHVGAGESSVPCGSCGAPCNLRTANTAANRGRQFYSCQAQSCNFFVWKD- 741

Query: 1436 INNSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISGRCYV 1615
              ++ +G                               Q      FVSATG+P+SGRC++
Sbjct: 742  --DAGSGGVRGGDGGGVSRRGGSSNQRGRGWGRRRHDEQRRATTSFVSATGEPVSGRCFL 799

Query: 1616 CGDPSHFANVCPNR 1657
            CG+PSHFAN CPNR
Sbjct: 800  CGEPSHFANECPNR 813


>ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
            gi|508700742|gb|EOX92638.1| Topoisomerase 3alpha isoform
            2, partial [Theobroma cacao]
          Length = 845

 Score =  727 bits (1876), Expect = 0.0
 Identities = 344/483 (71%), Positives = 384/483 (79%), Gaps = 2/483 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LLDPGT LWRNPS GGHDDKAHPPIHPT FS GE  WSQDH +LYELVVRHFLAC
Sbjct: 367  SYAQRLLDPGTSLWRNPSSGGHDDKAHPPIHPTKFSAGEHNWSQDHRKLYELVVRHFLAC 426

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPAVG ETTVEIDIA E FS SGRVI+ +NYLDVYR+ESWGGSMIP Y  GQQF PT+
Sbjct: 427  VSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQFIPTS 486

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLD+GVTR            CMDKAGIGTDATMHDHIKKLLDRFYATKD+NTRFSPT L
Sbjct: 487  LTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTKL 546

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKP LRSMME DMK VS+G KRK EVL TCLQQMKACFLDAR+N+
Sbjct: 547  GEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLDARLNK 606

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
            VKLLEAMA+FF+RSN+  GD+  V G++VR CG C ES M LK+  DG FMVGCLGFPQC
Sbjct: 607  VKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCLGFPQC 666

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RN +WLPGS  EAAVT+ +C SC PGPV++IQ KFRQ+EIPP ++ +HLGCIGGCD+ LR
Sbjct: 667  RNAIWLPGSVLEAAVTSNICGSCNPGPVYLIQFKFRQLEIPPGFNANHLGCIGGCDDILR 726

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDC--XXXX 1255
            QLIEIC TGSR      +ARGRG TT+SSN  R S+RQ AC++C+QTGHSSNDC      
Sbjct: 727  QLIEICGTGSR-----MSARGRGPTTTSSNVQRNSSRQGACLYCQQTGHSSNDCPSQFSG 781

Query: 1256 XXXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDS 1435
                           GE S+ C+ CGTPC +RTANTANN+GRKFYSC  +ECNFF+WED 
Sbjct: 782  SRNSRSRTSSQNGMQGEPSVSCSTCGTPCVLRTANTANNRGRKFYSCPSQECNFFIWEDE 841

Query: 1436 INN 1444
             NN
Sbjct: 842  HNN 844


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  709 bits (1831), Expect = 0.0
 Identities = 335/473 (70%), Positives = 376/473 (79%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LLDPGTGLWRNPS GGHDDKAHPPIHPT FS GE+GWSQDH R+YELVVRHFLAC
Sbjct: 366  SYAQRLLDPGTGLWRNPSTGGHDDKAHPPIHPTKFSPGETGWSQDHHRVYELVVRHFLAC 425

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPAVG ETTVEIDIAGE FSASGRVI+AKNYLDVYRFESWGGSMIP Y+ GQQF PTT
Sbjct: 426  VSQPAVGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWGGSMIPTYVHGQQFMPTT 485

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDSGVTR            CMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL
Sbjct: 486  LTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 545

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKP LRSMME DMK VS+G K K+EVLETCLQQMK CFLDAR+N+
Sbjct: 546  GEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQQMKTCFLDARINK 605

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
            VKLLEAMA+FF+RS+R  G++     DIVR CG C E++M L++  DG FMVGC+G+PQC
Sbjct: 606  VKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRRNRDGNFMVGCMGYPQC 665

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RN +WLPG   EA VTT VCN CTPGPV++IQ KFRQ+EIPP +  +HLGCIGGCD+TLR
Sbjct: 666  RNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIPPGFSVNHLGCIGGCDDTLR 725

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXXX 1261
            QL +IC TGSR       AR R   T+ SN+ + +TR + C+HC QTGH+S DC      
Sbjct: 726  QLTDICGTGSR-----VQARARAPNTTPSNSQQSNTRFATCVHCHQTGHASIDCPLQLSG 780

Query: 1262 XXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFF 1420
                         GE+S+ C  CGTPC++RTANTANN+GRKFYSC  + CNFF
Sbjct: 781  SRRVQSRGTNEQMGESSVTCGTCGTPCALRTANTANNRGRKFYSCPSQSCNFF 833


>ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
            gi|548834342|gb|ERM96738.1| hypothetical protein
            AMTR_s00202p00033660 [Amborella trichopoda]
          Length = 988

 Score =  702 bits (1811), Expect = 0.0
 Identities = 347/554 (62%), Positives = 386/554 (69%), Gaps = 1/554 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LL P  GLWRNPS GGHDDKAHPPIHPT FS GES WS DH RLYELVVRHFLAC
Sbjct: 442  SYAQRLLSP-EGLWRNPSSGGHDDKAHPPIHPTKFSAGESSWSPDHHRLYELVVRHFLAC 500

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPA+G  TTVEIDIAGE+F ASG +II KNYL+VYRFESWGGS IP Y FGQQF PT 
Sbjct: 501  VSQPAIGAGTTVEIDIAGEVFVASGLMIIEKNYLEVYRFESWGGSTIPTYAFGQQFIPTR 560

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDS VTR            CMDKAGIGTDATMHDHIKKLLDRFYA KD+NTRFSPT L
Sbjct: 561  LTLDSSVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNTRFSPTTL 620

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYD MG++LWKP LRS ME DMKAVS G K KSEVL +CLQQMK CFLD + ++
Sbjct: 621  GEALVMGYDCMGWDLWKPNLRSAMESDMKAVSEGRKTKSEVLASCLQQMKDCFLDVKSHK 680

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
             KL E M IFF+RSN PGGD   + G  VR C  C ES+M L++RPDG FMVGCL FP C
Sbjct: 681  AKLFETMGIFFERSNTPGGDNLHLAGGKVRSCQQCQESEMVLRRRPDGSFMVGCLRFPLC 740

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RNVVWLPG+ SEA VT  VCN C P PVF IQ KFR+MEIPPN+DT+HLGCIGGCDETLR
Sbjct: 741  RNVVWLPGAISEALVTEHVCNVCNPEPVFKIQFKFRRMEIPPNFDTEHLGCIGGCDETLR 800

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXXXXX 1261
            +LI+IC TG RN    +  RGR  T  S +A R +T Q  C  CRQ+GHSSNDC      
Sbjct: 801  ELIQICGTGPRNLSSGSGTRGRQPTQFSGSAQRRNTSQVVCARCRQSGHSSNDCPQISRS 860

Query: 1262 XXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSIN 1441
                         G   + C  C  PC+VRTANT NN+GR+FY C  +ECNFF+WED+I 
Sbjct: 861  QDAQRPGHGNSNSGGADVLCESCQMPCTVRTANTENNRGRRFYKCDRQECNFFIWEDAIG 920

Query: 1442 NSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISG-RCYVC 1618
            +   G                                    A FV+ATG+P+S  RC+ C
Sbjct: 921  SGNRGASRVNGNRSSVRGGQAGRGRGRRGARSGA-------ATFVTATGEPVSDRRCFSC 973

Query: 1619 GDPSHFANVCPNRG 1660
            GDPSHFANVCPNRG
Sbjct: 974  GDPSHFANVCPNRG 987


>ref|XP_006581778.1| PREDICTED: DNA topoisomerase 3-alpha isoform X4 [Glycine max]
          Length = 885

 Score =  698 bits (1802), Expect = 0.0
 Identities = 349/557 (62%), Positives = 399/557 (71%), Gaps = 5/557 (0%)
 Frame = +2

Query: 5    YAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLACV 184
            YAQ+L+DP  GLWRNP  GGHDDKAHPPI+PT FSTGESGWSQDH +LYELVVRHFLACV
Sbjct: 337  YAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHRKLYELVVRHFLACV 396

Query: 185  SQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTL 364
            S+PA+G ETTVEI+IAGELFSA GRVI+ KNYLDVYR+ESWGGSMIP Y  GQQF PT L
Sbjct: 397  SKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFNPTKL 456

Query: 365  TLDSGVTRXXXXXXXXXXXXCMDK--AGIGTDATMHDHIKKLLDRFYATKDANTRFSPTN 538
            TL+SGVTR             MD+  A IGTDATM DHIKK+LDR YATKD++TRF+PTN
Sbjct: 457  TLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTN 516

Query: 539  LGEALVMGYDD--MGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDAR 712
            LGEALV+GYDD  M Y+LWKP LRS ME  M  V  G K K+EVL T LQ+M+ACFL+AR
Sbjct: 517  LGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACFLEAR 576

Query: 713  VNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGF 892
            +N+VKLLEAMAIFF+RS R   DE    G++VR CG C ESDM L++  DG FMVGC+G+
Sbjct: 577  LNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGY 636

Query: 893  PQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDE 1072
            PQCRN VWLPGS SEA VTT  CN CTPGPV++IQ KFR++EIPPNY  +HLGCIGGCDE
Sbjct: 637  PQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPNYSPNHLGCIGGCDE 696

Query: 1073 TLRQLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXX 1252
             L QL EIC  G R       AR RG T  +SNAH  + RQ AC++CR+TGHSS DC   
Sbjct: 697  ILAQLTEICGRGPRMP-----ARPRGPTAPTSNAHHTNPRQGACMNCRETGHSSTDCPLR 751

Query: 1253 XXXXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWED 1432
                            GE S+ C+ CGTPC +RTANT NN+GRKFYSCQ +ECNFFVWED
Sbjct: 752  YGNVQHHGTSEHN---GEASVSCSSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWED 808

Query: 1433 SINNSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISGR-C 1609
            S+N  T G                               + T +  F+SATGDPISGR C
Sbjct: 809  SLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSR-TANTTFMSATGDPISGRRC 867

Query: 1610 YVCGDPSHFANVCPNRG 1660
            Y CGDPSHFANVCP+RG
Sbjct: 868  YTCGDPSHFANVCPHRG 884


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Glycine max]
            gi|571460704|ref|XP_006581776.1| PREDICTED: DNA
            topoisomerase 3-alpha isoform X2 [Glycine max]
          Length = 913

 Score =  698 bits (1802), Expect = 0.0
 Identities = 349/557 (62%), Positives = 399/557 (71%), Gaps = 5/557 (0%)
 Frame = +2

Query: 5    YAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLACV 184
            YAQ+L+DP  GLWRNP  GGHDDKAHPPI+PT FSTGESGWSQDH +LYELVVRHFLACV
Sbjct: 365  YAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHRKLYELVVRHFLACV 424

Query: 185  SQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTL 364
            S+PA+G ETTVEI+IAGELFSA GRVI+ KNYLDVYR+ESWGGSMIP Y  GQQF PT L
Sbjct: 425  SKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFNPTKL 484

Query: 365  TLDSGVTRXXXXXXXXXXXXCMDK--AGIGTDATMHDHIKKLLDRFYATKDANTRFSPTN 538
            TL+SGVTR             MD+  A IGTDATM DHIKK+LDR YATKD++TRF+PTN
Sbjct: 485  TLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTN 544

Query: 539  LGEALVMGYDD--MGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDAR 712
            LGEALV+GYDD  M Y+LWKP LRS ME  M  V  G K K+EVL T LQ+M+ACFL+AR
Sbjct: 545  LGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACFLEAR 604

Query: 713  VNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGF 892
            +N+VKLLEAMAIFF+RS R   DE    G++VR CG C ESDM L++  DG FMVGC+G+
Sbjct: 605  LNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGY 664

Query: 893  PQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDE 1072
            PQCRN VWLPGS SEA VTT  CN CTPGPV++IQ KFR++EIPPNY  +HLGCIGGCDE
Sbjct: 665  PQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPNYSPNHLGCIGGCDE 724

Query: 1073 TLRQLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXX 1252
             L QL EIC  G R       AR RG T  +SNAH  + RQ AC++CR+TGHSS DC   
Sbjct: 725  ILAQLTEICGRGPRMP-----ARPRGPTAPTSNAHHTNPRQGACMNCRETGHSSTDCPLR 779

Query: 1253 XXXXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWED 1432
                            GE S+ C+ CGTPC +RTANT NN+GRKFYSCQ +ECNFFVWED
Sbjct: 780  YGNVQHHGTSEHN---GEASVSCSSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWED 836

Query: 1433 SINNSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISGR-C 1609
            S+N  T G                               + T +  F+SATGDPISGR C
Sbjct: 837  SLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSR-TANTTFMSATGDPISGRRC 895

Query: 1610 YVCGDPSHFANVCPNRG 1660
            Y CGDPSHFANVCP+RG
Sbjct: 896  YTCGDPSHFANVCPHRG 912


>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| topoisomerase 3alpha
            [Arabidopsis thaliana]
          Length = 926

 Score =  694 bits (1791), Expect = 0.0
 Identities = 340/554 (61%), Positives = 395/554 (71%), Gaps = 2/554 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LL+P  GLWRNP++GGHDDKAHPPIHPT FS+GES WS+DH  +YELVVRH+LAC
Sbjct: 371  SYAQRLLEPEGGLWRNPANGGHDDKAHPPIHPTKFSSGESNWSRDHLNVYELVVRHYLAC 430

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPAV  ETTVEIDIAGE FSASGR I+AKNYL+VYRFESWGGS+IP Y  GQQF PTT
Sbjct: 431  VSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQFIPTT 490

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLD+ VTR            CMDKAGIGTDATMHDHIKKLLDR YATKDANTRFSPTNL
Sbjct: 491  LTLDAAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNL 550

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKP LR++ME DM  VS+G K K+EVLETCLQQMKACFLDARV +
Sbjct: 551  GEALVMGYDDMGYELWKPNLRALMEHDMNEVSVGRKTKAEVLETCLQQMKACFLDARVKK 610

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
             KLLEAM IFF+RSN     E    G++VR C  C+ESDM L++  DG FMVGC+ +PQC
Sbjct: 611  SKLLEAMTIFFERSNNTDESESQTAGEVVRRCNLCNESDMALRKNRDGNFMVGCMNYPQC 670

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RN VWLPG T EA+VTT VC SC PGPV+ I  KFRQ+ IPP +D +HLGC+GGCD+ L+
Sbjct: 671  RNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFDVNHLGCVGGCDDILK 730

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQS-ACIHCRQTGHSSNDCXXXXX 1258
            QLI+IC TGSR+      AR    T  S+N    +TRQS  CIHC+Q GH+S +C     
Sbjct: 731  QLIDICGTGSRSQ-----ARRTPGTAPSNNIQGSNTRQSNVCIHCQQRGHASTNCPSRVP 785

Query: 1259 XXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSI 1438
                           E+++ CN CG+ C +RTANT  N+GR+F+SC  + C+FF WEDSI
Sbjct: 786  ASRNSRPTATNPRNDESTVSCNTCGSQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSI 845

Query: 1439 NNSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISG-RCYV 1615
            NNS+ G                               +      FVSATG+P+SG RC+ 
Sbjct: 846  NNSS-GNATTGSNSGGSGRRGSRGRGRGGRGGQSSGGRRGSGTSFVSATGEPVSGIRCFS 904

Query: 1616 CGDPSHFANVCPNR 1657
            CGDPSHFAN CPNR
Sbjct: 905  CGDPSHFANACPNR 918


>ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Glycine max]
          Length = 910

 Score =  692 bits (1785), Expect = 0.0
 Identities = 348/557 (62%), Positives = 399/557 (71%), Gaps = 5/557 (0%)
 Frame = +2

Query: 5    YAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLACV 184
            YAQ+L+DP  GLWRNP  GGHDDKAHPPI+PT FSTGESGWSQDH +LYELVVRHFLACV
Sbjct: 365  YAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHRKLYELVVRHFLACV 424

Query: 185  SQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTTL 364
            S+PA+G ETTVEI+IAGELFSA GRVI+ KNYLDVYR+ESWGGSMIP Y  GQQF PT L
Sbjct: 425  SKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFNPTKL 484

Query: 365  TLDSGVTRXXXXXXXXXXXXCMDK--AGIGTDATMHDHIKKLLDRFYATKDANTRFSPTN 538
            TL+SGVTR             MD+  A IGTDATM DHIKK+LDR YATKD++TRF+PTN
Sbjct: 485  TLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTN 544

Query: 539  LGEALVMGYDD--MGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDAR 712
            LGEALV+GYDD  M Y+LWKP LRS ME  M  V  G K K+EVL T LQ+M+ACFL+AR
Sbjct: 545  LGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACFLEAR 604

Query: 713  VNRVKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGF 892
            +N+VKLLEAMAIFF+RS+    DE    G++VR CG C ESDM L++  DG FMVGC+G+
Sbjct: 605  LNKVKLLEAMAIFFERSS---SDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGY 661

Query: 893  PQCRNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDE 1072
            PQCRN VWLPGS SEA VTT  CN CTPGPV++IQ KFR++EIPPNY  +HLGCIGGCDE
Sbjct: 662  PQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPNYSPNHLGCIGGCDE 721

Query: 1073 TLRQLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQSACIHCRQTGHSSNDCXXX 1252
             L QL EIC  G R       AR RG T  +SNAH  + RQ AC++CR+TGHSS DC   
Sbjct: 722  ILAQLTEICGRGPRMP-----ARPRGPTAPTSNAHHTNPRQGACMNCRETGHSSTDCPLR 776

Query: 1253 XXXXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWED 1432
                            GE S+ C+ CGTPC +RTANT NN+GRKFYSCQ +ECNFFVWED
Sbjct: 777  YGNVQHHGTSEHN---GEASVSCSSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWED 833

Query: 1433 SINNSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISGR-C 1609
            S+N  T G                               + T +  F+SATGDPISGR C
Sbjct: 834  SLNAGTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSR-TANTTFMSATGDPISGRRC 892

Query: 1610 YVCGDPSHFANVCPNRG 1660
            Y CGDPSHFANVCP+RG
Sbjct: 893  YTCGDPSHFANVCPHRG 909


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  691 bits (1782), Expect = 0.0
 Identities = 339/554 (61%), Positives = 393/554 (70%), Gaps = 2/554 (0%)
 Frame = +2

Query: 2    SYAQQLLDPGTGLWRNPSDGGHDDKAHPPIHPTNFSTGESGWSQDHCRLYELVVRHFLAC 181
            SYAQ+LL+P  GLWRNP +GGHDDKAHPPIHPT FS+GES WS+DH  +YELVVRH+LAC
Sbjct: 371  SYAQRLLEPEGGLWRNPGNGGHDDKAHPPIHPTKFSSGESNWSRDHLNVYELVVRHYLAC 430

Query: 182  VSQPAVGGETTVEIDIAGELFSASGRVIIAKNYLDVYRFESWGGSMIPKYIFGQQFTPTT 361
            VSQPA   ETTVEIDIAGE FSASGR I+AKNYL+VYRFESWGGS+IP Y  GQQF PTT
Sbjct: 431  VSQPAKAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQFIPTT 490

Query: 362  LTLDSGVTRXXXXXXXXXXXXCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNL 541
            LTLDS VTR            CMDKAGIGTDATMHDHIKKLLDR YATKDANTRFSPTNL
Sbjct: 491  LTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANTRFSPTNL 550

Query: 542  GEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRKSEVLETCLQQMKACFLDARVNR 721
            GEALVMGYDDMGYELWKP LR++ME DM  VS+G K K+EVLETCLQQMKACFLDARV +
Sbjct: 551  GEALVMGYDDMGYELWKPNLRALMERDMNEVSVGRKTKAEVLETCLQQMKACFLDARVKK 610

Query: 722  VKLLEAMAIFFDRSNRPGGDEQSVVGDIVRPCGACHESDMTLKQRPDGKFMVGCLGFPQC 901
             KLLEAM IFF+RSN     E    G+++R C  C+ESDM L++  DG FMVGC+ +PQC
Sbjct: 611  SKLLEAMTIFFERSNNTDESESQTAGEVIRRCNLCNESDMALRKNRDGNFMVGCMNYPQC 670

Query: 902  RNVVWLPGSTSEAAVTTQVCNSCTPGPVFMIQLKFRQMEIPPNYDTDHLGCIGGCDETLR 1081
            RN VWLPG T EA+VTT VC +C PGPV+ I  KFRQ+ IPP +D +HLGCIGGCD+ L+
Sbjct: 671  RNAVWLPGPTLEASVTTDVCQTCGPGPVYKILFKFRQIGIPPGFDVNHLGCIGGCDDILK 730

Query: 1082 QLIEICRTGSRNTVPVNAARGRGQTTSSSNAHRGSTRQ-SACIHCRQTGHSSNDCXXXXX 1258
            QLI+IC TGSR     + AR    T  S+N    +TRQ + CIHC+Q GH+S +C     
Sbjct: 731  QLIDICGTGSR-----SQARRAPGTVPSNNIQGSNTRQGNFCIHCQQRGHASANCPSRAT 785

Query: 1259 XXXXXXXXXXXXXXGETSIPCNICGTPCSVRTANTANNKGRKFYSCQIRECNFFVWEDSI 1438
                           E+++ CN CGT C +RTANT  N+GR+F+SC  + C+FF WEDSI
Sbjct: 786  AFRNSRLTATNPRNDESTVSCNTCGTQCVLRTANTEANRGRQFFSCPTQGCSFFAWEDSI 845

Query: 1439 NNSTAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNTIDAMFVSATGDPISG-RCYV 1615
            NNS+                                 +      FVSATG+P+SG RC+ 
Sbjct: 846  NNSSGN----ATTGSNSGGSGRRGRGRGGRGGQSGGGRRNSGTSFVSATGEPVSGIRCFS 901

Query: 1616 CGDPSHFANVCPNR 1657
            CGDPSHFANVCPNR
Sbjct: 902  CGDPSHFANVCPNR 915