BLASTX nr result
ID: Akebia24_contig00006364
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00006364
(1094 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr... 414 e-113
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec... 411 e-112
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr... 408 e-111
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun... 403 e-110
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 403 e-110
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec... 400 e-109
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr... 400 e-109
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr... 400 e-109
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia... 400 e-109
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr... 400 e-109
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr... 400 e-109
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 397 e-108
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec... 384 e-104
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309... 383 e-104
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s... 372 e-100
ref|XP_002312652.1| RNA recognition motif-containing family prot... 363 9e-98
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu... 343 6e-92
ref|XP_002315647.1| RNA recognition motif-containing family prot... 343 6e-92
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus... 332 1e-88
ref|XP_002889992.1| RNA recognition motif-containing protein [Ar... 301 3e-79
>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
gi|557540375|gb|ESR51419.1| hypothetical protein
CICLE_v10030915mg [Citrus clementina]
Length = 658
Score = 414 bits (1065), Expect = e-113
Identities = 224/361 (62%), Positives = 260/361 (72%), Gaps = 27/361 (7%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+DY +EEYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ E P
Sbjct: 8 QIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAP 67
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI------ 336
+ GV N +Q + D ++ + GVS+ +PGV +E K +N G FP Q
Sbjct: 68 PPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQNDVQVAV 126
Query: 337 ---TKGIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS------ 483
G G+YPD VSQKGSV +A V N F+G + PP++GVDP+ M
Sbjct: 127 NRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMPGRVANE 186
Query: 484 ----LGPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTT 639
L PGA P+G +P NQ VN+N NR M+NEN IRP +ENG +MLFVGELHWWTT
Sbjct: 187 PAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVGELHWWTT 245
Query: 640 DAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACV 819
DAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFF++ AA+ACK+GMNGH FNGR CV
Sbjct: 246 DAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCV 305
Query: 820 VTFASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVG 999
V FASPQTLKQMGASY+NK Q Q QSQ GRRPMNDG GRGG MNYQ G D GRNFG+ G
Sbjct: 306 VAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSG-DGGRNFGRGG 364
Query: 1000 W 1002
W
Sbjct: 365 W 365
>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 658
Score = 411 bits (1057), Expect = e-112
Identities = 223/361 (61%), Positives = 259/361 (71%), Gaps = 27/361 (7%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+DY +EEYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ E P
Sbjct: 8 QIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAP 67
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI------ 336
+ GV N +Q + D ++ + GVS+ +PGV +E K +N G FP Q
Sbjct: 68 PPSAGVGNGRLQVKKTDVPEQQV-QAGVSQGSNVPGVSVEGKYTNAGTHFPAQNDVQVAV 126
Query: 337 ---TKGIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS------ 483
G G+YPD VSQKGSV +A V N F+G + P ++GVDP+ M
Sbjct: 127 NRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVANE 186
Query: 484 ----LGPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTT 639
L PGA P+G +P NQ VN+N NR M+NEN IRP +ENG +MLFVGELHWWTT
Sbjct: 187 PAPVLNPGAAGPQGAL-IPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVGELHWWTT 245
Query: 640 DAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACV 819
DAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFF++ AA+ACK+GMNGH FNGR CV
Sbjct: 246 DAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCV 305
Query: 820 VTFASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVG 999
V FASPQTLKQMGASY+NK Q Q QSQ GRRPMNDG GRGG MNYQ G D GRNFG+ G
Sbjct: 306 VAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGGGRGGNMNYQSG-DGGRNFGRGG 364
Query: 1000 W 1002
W
Sbjct: 365 W 365
>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695488|ref|XP_007044903.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708837|gb|EOY00734.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 653
Score = 408 bits (1049), Expect = e-111
Identities = 214/358 (59%), Positives = 262/358 (73%), Gaps = 24/358 (6%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+D+GDEEYG +QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P
Sbjct: 8 QIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAP 67
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITK---- 342
GG+ + G+QAQ N+ R + G S+ + IPGV ++ K NV A +P+Q +
Sbjct: 68 PQPGGMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGKHLNVTARYPEQDGQPAVS 126
Query: 343 ----GIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPN---------- 474
G G YP +SQKG V + QV N F+G S K G+DP+
Sbjct: 127 RPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVPQKIANVP 186
Query: 475 --QMSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAE 648
++ G G P+G +P NQ+ LN N PM++EN +RP +ENG +MLFVGELHWWTTDAE
Sbjct: 187 AQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRPPIENGPTMLFVGELHWWTTDAE 246
Query: 649 LESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTF 828
LESVLSQYGRVKEIKFFDERASGKSKGYCQVEF++ +A+ACKEGM+G+ FNGRACVV F
Sbjct: 247 LESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYMFNGRACVVAF 306
Query: 829 ASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
ASPQTLKQMGASY+NK Q Q+Q+Q GRRP NDG+GRGG MNYQ G D GRN+G+ GW
Sbjct: 307 ASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NDGLGRGGNMNYQSG-DAGRNYGRGGW 362
>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
gi|462422613|gb|EMJ26876.1| hypothetical protein
PRUPE_ppa002814mg [Prunus persica]
Length = 630
Score = 403 bits (1036), Expect = e-110
Identities = 219/350 (62%), Positives = 256/350 (73%), Gaps = 16/350 (4%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+DY DEEYG +QKLQYQGSGAI ALA+EE M EDDEYDDLYNDVNV EGF+QM +SE P
Sbjct: 5 QIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHRSEAP 64
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGIGD 354
+ GGV N G+QAQ D +R+ + GVS+E IPGV ++ K S+ A FP+Q G
Sbjct: 65 LPPGGVGNGGLQAQKTDVTETRV-QAGVSQESKIPGVSVQGKYSSAVAQFPEQQ----GQ 119
Query: 355 YPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQ------------MSLGPGA 498
P + E ++G+T + G + MPP G D + M+ G
Sbjct: 120 PP-----------VAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTALESVPSMNSGTAG 167
Query: 499 PRGVTQMPINQVNL--NANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQY 672
P GVTQMP NQ+++ NANRPM NEN IRP VENG++MLFVGELHWWTTDAELESVLSQY
Sbjct: 168 PTGVTQMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHWWTTDAELESVLSQY 227
Query: 673 GRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQ 852
GRVKEIKFFDERASGKSKGYCQVEF + AA+ACKEGM+G+ FNGRACVV FASPQTLKQ
Sbjct: 228 GRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRACVVAFASPQTLKQ 287
Query: 853 MGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
MGASYL+K+Q Q QSQ GRRPMN+GVGRGGG+NYQ G GRNFG+ GW
Sbjct: 288 MGASYLSKSQGQTQSQQPGRRPMNEGVGRGGGVNYQTGDTGGRNFGRGGW 337
>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
uncharacterized protein LOC100268141 isoform 2 [Vitis
vinifera]
Length = 647
Score = 403 bits (1035), Expect = e-110
Identities = 218/359 (60%), Positives = 258/359 (71%), Gaps = 25/359 (6%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPV 177
QLDY DEEYG +QK+ +QG GAI ALA++ELMGEDDEYDDLYNDVNVGEGF+QM +SE
Sbjct: 5 QLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHRSEAP 64
Query: 178 SAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSN----------VGATFP 327
+ GV+ G D+ + + G S+ + IPGV IE K SN + P
Sbjct: 65 APSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNPHFHEKKEGPMAVKGP 124
Query: 328 DQITKGIGDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQ---------- 477
+ + D P VSQKG V M + QV N F+G +P+P K+G +P+
Sbjct: 125 EMGSTSHLDGPS-VSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHGKIANEST 183
Query: 478 --MSLGPGAPRGVTQMPINQV--NLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDA 645
++ G G PR V QM NQ+ N+N NRPM+NEN IRP V+NG +MLFVGELHWWTTDA
Sbjct: 184 PVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGELHWWTTDA 243
Query: 646 ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVT 825
ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEF+++ AA+ACKEGMNG+ FNGRACVV
Sbjct: 244 ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFNGRACVVA 303
Query: 826 FASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
FASPQTLKQMGASY+NKTQ Q+QSQ GRRPMNDGVGRGGGMN QGG D GRN+G+ GW
Sbjct: 304 FASPQTLKQMGASYMNKTQAQSQSQ--GRRPMNDGVGRGGGMNMQGG-DAGRNYGRGGW 359
>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Citrus sinensis]
Length = 655
Score = 400 bits (1029), Expect = e-109
Identities = 220/361 (60%), Positives = 254/361 (70%), Gaps = 27/361 (7%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+DY ++EYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYNDVNVG+G +Q QQ E P
Sbjct: 5 QIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAP 64
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI------ 336
+ GV N +Q + D R+ G S+ IPGV +E K +N G+ FP Q
Sbjct: 65 PPSAGVGNGRLQVKKTDVPEQRVQVGG-SQGSNIPGVSVEGKYTNAGSHFPAQNDVQVAV 123
Query: 337 ---TKGIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS------ 483
G G+YPD VSQKGSV +A V N F+G + P ++GVDP+ M
Sbjct: 124 NRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVANE 183
Query: 484 ----LGPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTT 639
L PGA P+G +P NQ VN N NR M+NEN IRP +ENG +MLFVGELHWWTT
Sbjct: 184 PAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELHWWTT 242
Query: 640 DAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACV 819
DAELESVLSQYGR KEIKFFDERASGKSKGYCQVEFF++ AA+ACK+GMNGH FNGR CV
Sbjct: 243 DAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCV 302
Query: 820 VTFASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVG 999
V FASPQTLKQMGASY+NK Q Q QSQ G RPMNDG GRGG NYQ G D GRNFG+ G
Sbjct: 303 VAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSG-DGGRNFGRGG 361
Query: 1000 W 1002
W
Sbjct: 362 W 362
>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
gi|567891321|ref|XP_006438181.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540376|gb|ESR51420.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
gi|557540377|gb|ESR51421.1| hypothetical protein
CICLE_v10030917mg [Citrus clementina]
Length = 655
Score = 400 bits (1029), Expect = e-109
Identities = 219/361 (60%), Positives = 254/361 (70%), Gaps = 27/361 (7%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+DY ++EYG +QK+QYQG GAIPALA+EELMGEDDEYDDLYND+NVG+G +Q QQ E P
Sbjct: 5 QIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQPEAP 64
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQI------ 336
+ GV N +Q + D R+ G S+ IPGV +E K +N G+ FP Q
Sbjct: 65 PPSAGVGNGRLQVKKTDVPEQRVQVGG-SQGSNIPGVSVEGKYTNAGSDFPAQNDVQVAV 123
Query: 337 ---TKGIGDYPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS------ 483
G G+YPD VSQKGSV +A V N F+G + P ++GVDP+ M
Sbjct: 124 NRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRAANE 183
Query: 484 ----LGPGA--PRGVTQMPINQ--VNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTT 639
L PGA P+G +P NQ VN N NR M+NEN IRP +ENG +MLFVGELHWWTT
Sbjct: 184 PAPVLNPGAAGPQGAL-IPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELHWWTT 242
Query: 640 DAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACV 819
DAELESVLSQYGR KEIKFFDERASGKSKGYCQVEFF++ AA+ACK+GMNGH FNGR CV
Sbjct: 243 DAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCV 302
Query: 820 VTFASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVG 999
V FASPQTLKQMGASY+NK Q Q QSQ G RPMNDG GRGG NYQ G D GRNFG+ G
Sbjct: 303 VAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGGGRGGNTNYQSG-DGGRNFGRGG 361
Query: 1000 W 1002
W
Sbjct: 362 W 362
>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
gi|508708844|gb|EOY00741.1| RNA-binding family protein
isoform 6 [Theobroma cacao]
Length = 602
Score = 400 bits (1029), Expect = e-109
Identities = 209/358 (58%), Positives = 262/358 (73%), Gaps = 24/358 (6%)
Frame = +1
Query: 1 QLDYGDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+D+GDEEYG QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P
Sbjct: 8 QIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAP 67
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI-- 348
+ GG+ + G++AQ N+ R+ G S+ + IPGV ++ K NV A +P++ +
Sbjct: 68 LQPGGLGSTGLKAQRNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVN 126
Query: 349 ------GDYPD--EVSQKGSVSAMGSEAQVGNTEFRG-----------PSPMPPKSGVDP 471
G YP +SQKGSV+ + QV N F+G PS +P K DP
Sbjct: 127 RPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDP 186
Query: 472 NQ-MSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAE 648
Q ++ G G P+G +P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAE
Sbjct: 187 AQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAE 246
Query: 649 LESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTF 828
LESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF++ +A+ CKEGMNG+ FNGRACVV F
Sbjct: 247 LESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAF 306
Query: 829 ASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
ASPQTLKQMGASY+NK Q Q+Q+Q GRRP N+G+GRGG +NYQ G D GRN+G+ GW
Sbjct: 307 ASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSG-DAGRNYGRGGW 362
>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
gi|508708843|gb|EOY00740.1| RNA-binding family protein
isoform 5, partial [Theobroma cacao]
Length = 656
Score = 400 bits (1029), Expect = e-109
Identities = 209/358 (58%), Positives = 262/358 (73%), Gaps = 24/358 (6%)
Frame = +1
Query: 1 QLDYGDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+D+GDEEYG QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P
Sbjct: 8 QIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAP 67
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI-- 348
+ GG+ + G++AQ N+ R+ G S+ + IPGV ++ K NV A +P++ +
Sbjct: 68 LQPGGLGSTGLKAQRNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVN 126
Query: 349 ------GDYPD--EVSQKGSVSAMGSEAQVGNTEFRG-----------PSPMPPKSGVDP 471
G YP +SQKGSV+ + QV N F+G PS +P K DP
Sbjct: 127 RPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDP 186
Query: 472 NQ-MSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAE 648
Q ++ G G P+G +P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAE
Sbjct: 187 AQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAE 246
Query: 649 LESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTF 828
LESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF++ +A+ CKEGMNG+ FNGRACVV F
Sbjct: 247 LESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAF 306
Query: 829 ASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
ASPQTLKQMGASY+NK Q Q+Q+Q GRRP N+G+GRGG +NYQ G D GRN+G+ GW
Sbjct: 307 ASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSG-DAGRNYGRGGW 362
>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
gi|508708842|gb|EOY00739.1| RNA-binding family protein
isoform 4 [Theobroma cacao]
Length = 697
Score = 400 bits (1029), Expect = e-109
Identities = 209/358 (58%), Positives = 262/358 (73%), Gaps = 24/358 (6%)
Frame = +1
Query: 1 QLDYGDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+D+GDEEYG QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P
Sbjct: 8 QIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAP 67
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI-- 348
+ GG+ + G++AQ N+ R+ G S+ + IPGV ++ K NV A +P++ +
Sbjct: 68 LQPGGLGSTGLKAQRNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVN 126
Query: 349 ------GDYPD--EVSQKGSVSAMGSEAQVGNTEFRG-----------PSPMPPKSGVDP 471
G YP +SQKGSV+ + QV N F+G PS +P K DP
Sbjct: 127 RPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDP 186
Query: 472 NQ-MSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAE 648
Q ++ G G P+G +P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAE
Sbjct: 187 AQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAE 246
Query: 649 LESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTF 828
LESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF++ +A+ CKEGMNG+ FNGRACVV F
Sbjct: 247 LESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAF 306
Query: 829 ASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
ASPQTLKQMGASY+NK Q Q+Q+Q GRRP N+G+GRGG +NYQ G D GRN+G+ GW
Sbjct: 307 ASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSG-DAGRNYGRGGW 362
>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590695496|ref|XP_007044905.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590695500|ref|XP_007044906.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508708839|gb|EOY00736.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508708841|gb|EOY00738.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 652
Score = 400 bits (1029), Expect = e-109
Identities = 209/358 (58%), Positives = 262/358 (73%), Gaps = 24/358 (6%)
Frame = +1
Query: 1 QLDYGDEEYGS-QKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+D+GDEEYG QK+QYQGSGAIPALA+EE+MGEDDEYDDLYNDVNVGEGF+Q+Q+SE P
Sbjct: 8 QIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQLQRSEAP 67
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKGI-- 348
+ GG+ + G++AQ N+ R+ G S+ + IPGV ++ K NV A +P++ +
Sbjct: 68 LQPGGLGSTGLKAQRNEAPEPRVEAGG-SQGLNIPGVSVQGKHPNVSARYPEKEEQPAVN 126
Query: 349 ------GDYPD--EVSQKGSVSAMGSEAQVGNTEFRG-----------PSPMPPKSGVDP 471
G YP +SQKGSV+ + QV N F+G PS +P K DP
Sbjct: 127 RPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVPQKIANDP 186
Query: 472 NQ-MSLGPGAPRGVTQMPINQVNLNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAE 648
Q ++ G G P+G +P NQ+ N N P+MNEN ++P +ENG +MLFVGELHWWTTDAE
Sbjct: 187 AQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVGELHWWTTDAE 246
Query: 649 LESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTF 828
LESVLSQYGR+KEIKFFDE+ASGKSKGYCQVEF++ +A+ CKEGMNG+ FNGRACVV F
Sbjct: 247 LESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFNGRACVVAF 306
Query: 829 ASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
ASPQTLKQMGASY+NK Q Q+Q+Q GRRP N+G+GRGG +NYQ G D GRN+G+ GW
Sbjct: 307 ASPQTLKQMGASYMNKNQGQSQAQPQGRRP-NEGLGRGGNLNYQSG-DAGRNYGRGGW 362
>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
gi|223546091|gb|EEF47594.1| RNA binding protein, putative
[Ricinus communis]
Length = 644
Score = 397 bits (1021), Expect = e-108
Identities = 221/354 (62%), Positives = 260/354 (73%), Gaps = 20/354 (5%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
Q+DY DEEYG +QKLQYQGSGAIPALAEEE MGEDDEYDDLYNDVN+GE F+QM +SE P
Sbjct: 5 QIDYEDEEYGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHRSEAP 63
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKG--I 348
+ V N G Q + ++DL R+ G S+ + IPGV +E K S G FP+Q KG I
Sbjct: 64 PAPPSVGNGGFQPRNSNDL--RVESGG-SQGLNIPGVAVESKYST-GTHFPEQNVKGPEI 119
Query: 349 GD--YPD--EVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDP----NQMSLGP---- 492
G YPD ++QK V M +++Q N F+G + P GVDP N++S P
Sbjct: 120 GSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPTPVP 179
Query: 493 --GAPRGVTQMPINQVNLN--ANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESV 660
G PR + Q+P +Q+N+N NR NEN IRP +ENG++ML+VGELHWWTTDAELE+V
Sbjct: 180 NAGVPRVIPQLPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDAELENV 239
Query: 661 LSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQ 840
LSQYG VKEIKFFDERASGKSKGYCQVEF+++ AA+ACKEGMNGH FNGRACVV FAS Q
Sbjct: 240 LSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVAFASQQ 299
Query: 841 TLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
TLKQMGASY+NK Q Q QSQ GRRPMNDG GRGG MNYQGG D GRNFG+ GW
Sbjct: 300 TLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGG-DAGRNFGRGGW 352
>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185-like isoform X1 [Solanum tuberosum]
gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit CG7185-like
isoform X2 [Solanum tuberosum]
Length = 648
Score = 384 bits (987), Expect = e-104
Identities = 211/359 (58%), Positives = 250/359 (69%), Gaps = 25/359 (6%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-P 174
QLDYGDEEYG S K+QY GSG IPALAE+E+MGEDDEYDDLYNDVN+GEGF+Q+Q+SE P
Sbjct: 8 QLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQLQRSEVP 67
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQ----ITK 342
V + N QAQ + SR G S+E IPG+ E K + FP Q + +
Sbjct: 68 VPSVDAGNGNFQAQKDSFPASRAGGLG-SEEAKIPGIATEGKYAGTEVQFPQQKGEPVVE 126
Query: 343 GIGDYPDEVSQKGSVSA--MGSEAQVGNTEFRGPSPMPPKSGVDPNQM------------ 480
+ P + +QK SA M +Q GN+ ++G PMP K G DP M
Sbjct: 127 RETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMPEKNASEATPLM 186
Query: 481 -SLGPGAPRGVTQMPINQVN----LNANRPMMNENVIRPVVENGNSMLFVGELHWWTTDA 645
S+ PG PR V MP NQ+N +N N P+++E RP +ENGN+MLFVGELHWWTTDA
Sbjct: 187 NSVVPG-PRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFVGELHWWTTDA 245
Query: 646 ELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVT 825
ELESVL+QYG VKEIKFFDERASGKSKGYCQVEFF+ +A+ACKEGMNG+NFNGRACVV
Sbjct: 246 ELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGYNFNGRACVVA 305
Query: 826 FASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
FA+PQT+KQMG+SY NKTQ Q QSQ GRRPMN+GVGR GG NY G D GRNFG+ W
Sbjct: 306 FATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNEGVGR-GGPNYTPG-DAGRNFGRGSW 362
>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
subsp. vesca]
Length = 646
Score = 383 bits (984), Expect = e-104
Identities = 209/348 (60%), Positives = 249/348 (71%), Gaps = 17/348 (4%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEP- 174
Q+DY +EEYG +QKLQYQ SGAIPALA+EE M EDDEYDDLYNDVNVGEGF+QM + EP
Sbjct: 8 QIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQMHRPEPP 67
Query: 175 VSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKG-IG 351
+ GV N G+QAQ N+ R+ + G S+EV PG +E K S+V P+Q + +
Sbjct: 68 LPPAGVGNGGLQAQKNNVPEQRV-QGGASQEVKNPGFSVEGKYSSV----PEQKDQPPVS 122
Query: 352 DYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQ------------MSLGPG 495
P+ SQKG V M +AQV N F+G + M D + M+ G
Sbjct: 123 VVPEMASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKIANGPIPSMNSGSN 182
Query: 496 APRGVTQMPINQVNL--NANRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQ 669
P V QMP NQ+N+ N NRPM+NEN IRP VENG++ LFVGELHWWTTDAELE VLSQ
Sbjct: 183 GPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHWWTTDAELEGVLSQ 242
Query: 670 YGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLK 849
+GR+KEIKFFDERASGKSKGYCQV+F++ AASACKEGM+G+ FNGRACVV FAS QTLK
Sbjct: 243 FGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGRACVVAFASSQTLK 302
Query: 850 QMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGK 993
QMG SY+NK+Q Q Q+Q GRRPMNDG GRGG MN+QGG D GRNFG+
Sbjct: 303 QMGDSYVNKSQGQVQTQPQGRRPMNDGAGRGGNMNFQGG-DTGRNFGR 349
>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
notabilis]
Length = 636
Score = 372 bits (955), Expect = e-100
Identities = 211/357 (59%), Positives = 253/357 (70%), Gaps = 24/357 (6%)
Frame = +1
Query: 4 LDYGDEEYG-SQKLQYQGSG-AIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-- 171
+D+ DEEYG +QK QYQGSG AI ALA+EELMG+DDEYDDLYNDVNVGEGF+Q+Q+SE
Sbjct: 6 IDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQRSEAP 65
Query: 172 --PVSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITKG 345
P +AG V G+QAQ + R + G S++ IPGV E + S+ G+ FP Q
Sbjct: 66 SLPAAAG--VGNGLQAQKRNFPEPR-EEIGGSQQPNIPGVSAEGRFSSAGSQFPGQQD-- 120
Query: 346 IGDYPDEVSQKGSV----SAMGSEAQVGNTEFRGPSPMPPKSGVD----PNQM------- 480
G D+ S+ GS+ A GS+ F+G PM GVD P +M
Sbjct: 121 -GLKVDKKSEAGSMVYPDGASGSQKGRIVAGFQGSKPMLHSVGVDSSDIPGKMVNEPIQA 179
Query: 481 -SLGPGAPRGVTQMPINQVNLNAN--RPMMNENVIRPVVENGNSMLFVGELHWWTTDAEL 651
+ G PRG+ M NQ +NAN P++NEN IRP +ENG++MLFVGELHWWTTDAEL
Sbjct: 180 PNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGELHWWTTDAEL 239
Query: 652 ESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFA 831
ESVLSQYGRVKEIKFFDERASGKSKGYCQVE++++ AA ACKEGM+GH FNGRACVV FA
Sbjct: 240 ESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVFNGRACVVAFA 299
Query: 832 SPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
SPQTLKQMGA+Y++K QVQ QSQ GRRP+NDGVGRGG N+Q G D GRNFG+ GW
Sbjct: 300 SPQTLKQMGAAYMSKNQVQNQSQPQGRRPINDGVGRGGNPNFQSG-DGGRNFGRGGW 355
>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222852472|gb|EEE90019.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 619
Score = 363 bits (931), Expect = 9e-98
Identities = 201/357 (56%), Positives = 240/357 (67%), Gaps = 24/357 (6%)
Frame = +1
Query: 4 LDYGDEEYGSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE-PVS 180
+DY +EE K+QYQGSGAIPALAEEE MGEDDEYDDLYNDVNVGE F+QM SE P
Sbjct: 1 MDYEEEE----KMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55
Query: 181 AGGVVNEGVQAQMNDDLGSRIPKHGVSK-EVTIPGVEIEKKDSNVGATFPDQITKGIGDY 357
V N G Q + + SRI G +T G +E SN A FP+Q +
Sbjct: 56 PATVGNGGFQTRNAHE--SRIETGGSQALAITGGGPAVEGIYSNAKAHFPEQKQVAVAVE 113
Query: 358 PDEV--------SQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMS---------- 483
+V +QKG V M + QV N F+ +P+PP GVDP+ MS
Sbjct: 114 AQDVGPVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEPEPL 173
Query: 484 --LGPGAPRGVTQMPINQVNLNA--NRPMMNENVIRPVVENGNSMLFVGELHWWTTDAEL 651
G PRG QM +NQ++++A NRP++NEN +RP +ENG++ L+VGELHWWTTDAEL
Sbjct: 174 PITGSAGPRGAPQMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTDAEL 233
Query: 652 ESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFA 831
ES SQ+GRVKEIKFFDERASGKSKGYCQV+F+E+ AA+ACKEGMNGH FNGR CVV FA
Sbjct: 234 ESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVVAFA 293
Query: 832 SPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
SPQTLKQMGASY+NKTQ Q Q+Q GR MNDG GRGG N+Q G D GRN+G+ W
Sbjct: 294 SPQTLKQMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSG-DGGRNYGRGAW 349
>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
gi|550329195|gb|ERP56065.1| hypothetical protein
POPTR_0010s06150g [Populus trichocarpa]
Length = 591
Score = 343 bits (881), Expect = 6e-92
Identities = 195/340 (57%), Positives = 227/340 (66%), Gaps = 7/340 (2%)
Frame = +1
Query: 4 LDYGDEEYGSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE---- 171
+D+ +EE K+QYQGSGAIPALAEEEL GEDDEYDDLYNDVNVGE F+QM SE
Sbjct: 1 MDFEEEE----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55
Query: 172 PVSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTI-PGVEIEKKDSNVGATFPDQITKGI 348
P +AG N G Q + + SR+ G T GV +E K SN GA FP+Q GI
Sbjct: 56 PATAG---NGGFQTRNAHE--SRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGI 110
Query: 349 GDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMSLGPGAPRGVTQMPIN 528
G ++V G G + V G PRGV QM +N
Sbjct: 111 GVEANDVGSIG----YGDGSSVAQK---------------------GSAGPRGVPQMQVN 145
Query: 529 QVNLNA--NRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFFD 702
Q+N+NA NRP++NEN +RP +ENG + L+VGELHWWTTDAELESV SQYGRVKEIKFFD
Sbjct: 146 QMNMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFD 205
Query: 703 ERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQMGASYLNKTQ 882
ERASGKSKGYCQV+F+E+ AA+ACKEGMN H FNGR CVV FAS QTLKQMGASY++KTQ
Sbjct: 206 ERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQ 265
Query: 883 VQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
Q Q Q GR MNDG+GRGG NYQ G D GRN+G+ GW
Sbjct: 266 GQPQPQSQGRGSMNDGMGRGGNANYQSG-DGGRNYGRGGW 304
>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
gi|222864687|gb|EEF01818.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 573
Score = 343 bits (881), Expect = 6e-92
Identities = 195/340 (57%), Positives = 227/340 (66%), Gaps = 7/340 (2%)
Frame = +1
Query: 4 LDYGDEEYGSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSE---- 171
+D+ +EE K+QYQGSGAIPALAEEEL GEDDEYDDLYNDVNVGE F+QM SE
Sbjct: 1 MDFEEEE----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55
Query: 172 PVSAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTI-PGVEIEKKDSNVGATFPDQITKGI 348
P +AG N G Q + + SR+ G T GV +E K SN GA FP+Q GI
Sbjct: 56 PATAG---NGGFQTRNAHE--SRVETGGSQVLATSGAGVAVEGKYSNAGAHFPEQKQAGI 110
Query: 349 GDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMSLGPGAPRGVTQMPIN 528
G ++V G G + V G PRGV QM +N
Sbjct: 111 GVEANDVGSIG----YGDGSSVAQK---------------------GSAGPRGVPQMQVN 145
Query: 529 QVNLNA--NRPMMNENVIRPVVENGNSMLFVGELHWWTTDAELESVLSQYGRVKEIKFFD 702
Q+N+NA NRP++NEN +RP +ENG + L+VGELHWWTTDAELESV SQYGRVKEIKFFD
Sbjct: 146 QMNMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAELESVASQYGRVKEIKFFD 205
Query: 703 ERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQMGASYLNKTQ 882
ERASGKSKGYCQV+F+E+ AA+ACKEGMN H FNGR CVV FAS QTLKQMGASY++KTQ
Sbjct: 206 ERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAFASAQTLKQMGASYMSKTQ 265
Query: 883 VQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVGW 1002
Q Q Q GR MNDG+GRGG NYQ G D GRN+G+ GW
Sbjct: 266 GQPQPQSQGRGSMNDGMGRGGNANYQSG-DGGRNYGRGGW 304
>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
Length = 639
Score = 332 bits (852), Expect = 1e-88
Identities = 191/357 (53%), Positives = 228/357 (63%), Gaps = 24/357 (6%)
Frame = +1
Query: 1 QLDYGDEEYG-SQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQMQQSEPV 177
QLDYGDEEYG +QK+QY GAIPALAE+E++G+DDEYDDLYNDVNVGEGFMQMQ+SE
Sbjct: 8 QLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQMQRSEAP 67
Query: 178 SAGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQITK----G 345
V N N G+R S+EV V E + G DQ G
Sbjct: 68 PPSAVGNNSFSISKNTAPGTRAEAIA-SQEVNNGRVGNEGSYAPNGVQLSDQKNNLTAVG 126
Query: 346 IGDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMSLG------------ 489
P + SQ+ + + + +Q + ++G M K+ D S
Sbjct: 127 GPAQPVDASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSENIVGEPASLVYPN 186
Query: 490 PGAPRGVTQMPIN------QVNLNANRPMMNENVIRPVV-ENGNSMLFVGELHWWTTDAE 648
G+ +GV Q P N VN+N NR M +E +IRP ENGN M++VGELHWWTTDAE
Sbjct: 187 TGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIYVGELHWWTTDAE 246
Query: 649 LESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTF 828
+ESVL QYGRVKEIKFFDERASGKSKGYCQVEF++ AA+ACK+GM GH FNGRACVVT+
Sbjct: 247 VESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQGHIFNGRACVVTY 306
Query: 829 ASPQTLKQMGASYLNKTQVQAQSQVSGRRPMNDGVGRGGGMNYQGGADNGRNFGKVG 999
A+PQT KQMGASY NK Q Q+QSQ+ GR PMNDG GRG G NY G D GRNFG+ G
Sbjct: 307 ANPQTSKQMGASY-NKNQGQSQSQLQGRNPMNDGAGRGNGTNYPSG-DAGRNFGRGG 361
>ref|XP_002889992.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297335834|gb|EFH66251.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 573
Score = 301 bits (771), Expect = 3e-79
Identities = 176/352 (50%), Positives = 230/352 (65%), Gaps = 19/352 (5%)
Frame = +1
Query: 7 DYGDEEYGSQKLQYQGSGAIPALAEEELMGEDDEYDDLYNDVNVGEGFMQM--QQSEPVS 180
DYG G+QK+ +QGSG IPALA+EELMG+DDEYDDLY+DVNVGE F Q Q P
Sbjct: 6 DYG----GNQKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFFQAHNQPQPPAQ 61
Query: 181 AGGVVNEGVQAQMNDDLGSRIPKHGVSKEVTIPGVEIEKKDSNVGATFPDQIT------- 339
GG N +QAQ + P+ G+ T+ G + + G + PD +
Sbjct: 62 VGGTGNASLQAQTSHVAAE--PRMGIVSGGTVEG-KYRNDGGHNGISGPDTRSDVYPQAS 118
Query: 340 ----KG--IGDYPDEVSQKGSVSAMGSEAQVGNTEFRGPSPMPPKSGVDPNQMSLGPGAP 501
KG I +++ Q+GS S + + N F G + P+ P G P
Sbjct: 119 SFGAKGLNIDIQSNKIGQQGSTSVV-----LNNHGFSGNAVNVPEL---PVHNPYG-APP 169
Query: 502 RGVTQMPINQVNLNANRPMMNENVIRP-VVENGNSMLFVGELHWWTTDAELESVLSQYGR 678
+G Q+P++Q+++N N MMN++ +P VV+NGN+MLFVGELHWWTTDAE+ESVLSQYGR
Sbjct: 170 QGAQQIPVSQMSVNPN-VMMNKSPTQPFVVDNGNTMLFVGELHWWTTDAEIESVLSQYGR 228
Query: 679 VKEIKFFDERASGKSKGYCQVEFFESVAASACKEGMNGHNFNGRACVVTFASPQTLKQMG 858
VKEIKFFDER SGKSKGYCQVEF++S AA++CKEGMNG+ FNG+ACVV FASP+TLKQMG
Sbjct: 229 VKEIKFFDERVSGKSKGYCQVEFYDSAAAASCKEGMNGYIFNGKACVVAFASPETLKQMG 288
Query: 859 ASYLNKTQVQAQSQVSGRRPMNDGVGRG---GGMNYQGGADNGRNFGKVGWA 1005
A++ + Q Q+Q+ RRP+N+G+GRG MN Q G D GRN+G+ G+A
Sbjct: 289 ANFTGRN--QGQNQIQNRRPLNEGMGRGNNNNNMNTQNG-DGGRNYGRGGFA 337