BLASTX nr result
ID: Akebia24_contig00005655
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00005655
(1252 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 359 1e-96
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 344 5e-92
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 321 5e-85
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 313 1e-82
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The... 296 1e-77
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun... 295 4e-77
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 291 3e-76
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr... 281 3e-73
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 281 3e-73
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr... 281 3e-73
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr... 281 3e-73
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 276 1e-71
ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [A... 269 2e-69
emb|CAD20832.1| sigma factor [Spinacia oleracea] 268 5e-69
ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-... 266 1e-68
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 264 5e-68
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 257 6e-66
ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC ... 254 5e-65
ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC ... 254 5e-65
ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC ... 254 5e-65
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 359 bits (922), Expect = 1e-96
Identities = 196/384 (51%), Positives = 249/384 (64%), Gaps = 6/384 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKD 297
MG GF L+ KW FPI V+GKEAS++S R S SV E+ E LYKD
Sbjct: 1 MGMGFRLNLKWDFPISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYKD 60
Query: 298 SLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQ 477
K ++ S G+LQ EN E MKMKIG+ SH L+ ++ + I +D S S LQ
Sbjct: 61 PFKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAGLQ 120
Query: 478 VNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPT 657
+K S FS L+EN++ +EE+F D+++V+LE+DI++QLG+LGA+KLF +CLSRTL
Sbjct: 121 ASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTSTSF 180
Query: 658 LSTPIPITELPRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKSSKISSPPLSFKT 837
P TE R+ NG +DD + ++V ALEK+ I + PL KT
Sbjct: 181 DLFSAP-TEHIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKT 239
Query: 838 ISKVPQRENPS------NSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVISF 999
I K P R + S NS +RL+ AK E++MS GVK ANLERIR +LE E G V S
Sbjct: 240 IRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASL 299
Query: 1000 SCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNVG 1179
S WAEAAGVD+KVLQQ+L FGWYCRD+LLRST SLV YIARNYR +G++ ED+ QAGN+G
Sbjct: 300 SNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLG 359
Query: 1180 VLQGAERFDHTRGYRFSTYIQYWI 1251
VLQGAERFDHT+GYRFSTY+QYWI
Sbjct: 360 VLQGAERFDHTKGYRFSTYVQYWI 383
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 344 bits (882), Expect = 5e-92
Identities = 185/353 (52%), Positives = 238/353 (67%), Gaps = 6/353 (1%)
Frame = +1
Query: 211 VRGKEASYESPRMSILSVIPEESEVLYKDSLKAYSSSFGSLQIIENQSGDKEEMKMKIGR 390
++GKEAS++S R S SV E+ E LYKD K ++ S G+LQ EN E MKMKIG+
Sbjct: 82 IQGKEASFDSTRFSFPSVTSEDCESLYKDPFKPFACSSGALQTFENDYSAMEAMKMKIGK 141
Query: 391 GSHRTLYNPIDDTSVSIQDDASTSYPRLQVNKTSCFSSLMENIEKIEEIFVDADVVKLEK 570
SH L+ ++ + I +D S S LQ +K S FS L+EN++ +EE+F D+++V+LE+
Sbjct: 142 CSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLER 201
Query: 571 DILIQLGKLGAIKLFHVCLSRTLGLKEPTLSTPIPITELPRDSPINGPIDDKVGNIIVXX 750
DI++QLG+LGA+KLF +CLSRTL P TE R+ NG +DD + ++V
Sbjct: 202 DIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAP-TEHIRECQTNGTVDDHLDKVVVRS 260
Query: 751 XXXXXXXXXXXXALEKSSKISSPPLSFKTISKVPQRENPS------NSMTRRLIIAKKES 912
ALEK+ I + PL KTI K P R + S NS +RL+ AK E+
Sbjct: 261 GKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEA 320
Query: 913 KMSIGVKEAANLERIRTSLEAETGQVISFSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRS 1092
+MS GVK ANLERIR +LE E G V S S WAEAAGVD+KVLQQ+L FGWYCRD+LLRS
Sbjct: 321 EMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRS 380
Query: 1093 TRSLVFYIARNYRRLGISLEDLRQAGNVGVLQGAERFDHTRGYRFSTYIQYWI 1251
T SLV YIARNYR +G++ ED+ QAGN+GVLQGAERFDHT+GYRFSTY+QYWI
Sbjct: 381 THSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWI 433
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 321 bits (822), Expect = 5e-85
Identities = 174/383 (45%), Positives = 247/383 (64%), Gaps = 5/383 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKD 297
MG GF L KW P+ RG EAS R+S LSV+ EE ++L K
Sbjct: 1 MGVGFRLTPKWGSPMQSHSATNSTSMFSSFSARGMEASVNQARLSFLSVVSEEGDILNKH 60
Query: 298 SLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQ 477
S K+++ S + Q +EN E +KM + + SH ++ N + + VS++++ STS+ RL+
Sbjct: 61 SFKSFACS-SAAQNVENDCLQMERLKMNVDKTSHVSINNMMGNDKVSVEEEISTSHTRLR 119
Query: 478 VNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPT 657
TS S L++N++ +E++ D D +KLE+DIL+QLG+LGA++ F+ CLSRTL
Sbjct: 120 ERMTSRISFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSNVL 179
Query: 658 LSTPIPITELPRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXAL-EKSSKISSPPLSFK 834
+ +P TE +S +G + D G +V A + K +S L K
Sbjct: 180 DLSAVP-TENTGESKTDGMLGDLTGKTVVRTGKKEERKFRRERAASDNGKKTTSLSLPSK 238
Query: 835 TI-SKVPQR---ENPSNSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVISFS 1002
T+ + +P+ + S+S +RR +IA+ E+KM+ GVK A++LERIRT+LE ETGQV+S S
Sbjct: 239 TVQNNLPKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSLS 298
Query: 1003 CWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNVGV 1182
CWAEA G+D+KVLQQ+L FGWYCRD+L+++T SLV YIARNYR +GI++EDL QAGN+G+
Sbjct: 299 CWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGL 358
Query: 1183 LQGAERFDHTRGYRFSTYIQYWI 1251
LQGAERFD TRGYRFSTY+QYWI
Sbjct: 359 LQGAERFDPTRGYRFSTYVQYWI 381
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 313 bits (801), Expect = 1e-82
Identities = 182/386 (47%), Positives = 243/386 (62%), Gaps = 8/386 (2%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXX-VRGKEASYESPRMSILSVIPEESEVLYK 294
MGFGF L+ K FP VRG+EA+ R+S LSVI EE ++ ++
Sbjct: 1 MGFGFRLNLKLDFPFHSPNSPSRLSSSPSSSFVRGREATSYQSRLSFLSVISEEGDIAHR 60
Query: 295 DSLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRL 474
D LK Y+ S+ ++Q +EN+ E K+ G+ SH L N I D VS+++D S P
Sbjct: 61 DPLKTYAYSY-AVQTVENEHSQGEGFKVNFGKRSHFGL-NIIGDAEVSLKEDIFVS-PSS 117
Query: 475 QVNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEP 654
+TS FS L+EN+ +E+ F D+D KLE+DIL+QLGKLGA+KLF+ CL+RTL
Sbjct: 118 TKERTSRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLETTN- 176
Query: 655 TLSTPIPITELPRDSPINGP-IDDKVGNIIVXXXXXXXXXXXXXXALEKSSKISSPPLSF 831
L TE+ + ING I++++ ++ + K K S PL
Sbjct: 177 VLEVSDVHTEIIGECNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSPSLPLPS 236
Query: 832 KTISK------VPQRENPSNSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVI 993
+ I V + S S +RRLIIA+ E++M+ G+K A+LE+IRT+LE ET +V+
Sbjct: 237 RPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVV 296
Query: 994 SFSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGN 1173
S SCWAEAAG+D KVLQQ+L FGWYCRD+L++STRSLV Y ARNYR GI+LEDL QAGN
Sbjct: 297 SLSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGN 356
Query: 1174 VGVLQGAERFDHTRGYRFSTYIQYWI 1251
+GVL+GAERFDHTRGYRFSTY+QYWI
Sbjct: 357 LGVLEGAERFDHTRGYRFSTYVQYWI 382
>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
C, putative [Theobroma cacao]
Length = 848
Score = 296 bits (758), Expect = 1e-77
Identities = 173/342 (50%), Positives = 222/342 (64%), Gaps = 11/342 (3%)
Frame = +1
Query: 259 SVIPEESEVLYKDSLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGS--HRTLYNPIDDTS 432
S +P + KD LKAY+SS + Q +E + EEMK+ IG+GS H ID T
Sbjct: 335 SRLPSSGVLSLKDPLKAYASS-AAPQTLEKGCLEIEEMKVNIGKGSQAHSHSLTMIDKTH 393
Query: 433 VSIQDDASTSYPRLQVNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKL 612
I D S+S Q K S +S LMEN++ +EE F D+DV+ LE++IL+QLG+ GA+KL
Sbjct: 394 ELIGGDKSSSRTSPQACKASHYSLLMENLDVLEETFADSDVLTLEREILLQLGRFGALKL 453
Query: 613 FHVCLSRTLGLKEPTLSTPIPITELPRDSP---INGPIDDKVGNIIVXXXXXXXXXXXXX 783
F+ CLSRTL S + ++++P +S +N +D + NI+V
Sbjct: 454 FNTCLSRTL-----KASNILDLSDVPANSGDCNMNLSVDGQKDNIVVCSRKKKQRKKIRE 508
Query: 784 XALEKSSKISSPPLSFKTIS------KVPQRENPSNSMTRRLIIAKKESKMSIGVKEAAN 945
ALE + IS+ + T+ KV + S+S +RRL IA+ E++MS GVK AN
Sbjct: 509 RALENPTIISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVAN 568
Query: 946 LERIRTSLEAETGQVISFSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARN 1125
LERIRT+LE ETG+ S SCWAEAAGV EKVLQQ L FGWYCRD+LLRSTRSLV Y ARN
Sbjct: 569 LERIRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARN 628
Query: 1126 YRRLGISLEDLRQAGNVGVLQGAERFDHTRGYRFSTYIQYWI 1251
YR LGI+ EDL QAG++GVLQGAERFDHTRGYRFSTY+Q+WI
Sbjct: 629 YRGLGIAHEDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWI 670
>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
gi|462419859|gb|EMJ24122.1| hypothetical protein
PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 295 bits (754), Expect = 4e-77
Identities = 174/385 (45%), Positives = 232/385 (60%), Gaps = 7/385 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXX-VRGKEASYESPRMSILSVIPEESEVLYK 294
MG GF L+ K FP+ VRG+E S+ S R+S LSVI EE E K
Sbjct: 1 MGLGFRLNLKCGFPVHSSHWQTTSPSKISSTSVRGREGSFNSARLSFLSVISEEGEASSK 60
Query: 295 DSLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRL 474
D LK Y+ S QI+E+ + EE+K + R + D + + + S L
Sbjct: 61 DPLKVYTFPSASPQILEDGVSELEEVKT-----AFRRVPKSFSDNQMPVAEGKFISSKGL 115
Query: 475 QVNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEP 654
+ S FS L++N+ +EE F +DV+KLEK+IL+QL +LGA+KLF +CLSRTL
Sbjct: 116 EACTASHFSLLLQNLNVLEETFATSDVLKLEKEILLQLARLGALKLFDICLSRTLKTSSF 175
Query: 655 TLSTPIPITELPRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKSSKISSPPLSFK 834
+ IP + + + D+ VG IIV + ++ +SS L K
Sbjct: 176 LDLSDIPTVPV-EEGKMERKEDNNVGEIIVRSGKKEERRSRKRTS--DNAIVSSNSLPPK 232
Query: 835 TISK------VPQRENPSNSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVIS 996
TI K + + SN +RRL I+K E++MSIGVK A+LERI+ +LE ETG+V +
Sbjct: 233 TIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKETGKVAT 292
Query: 997 FSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNV 1176
CWAEAAGV EKVL Q L FGWYC+D+L+RSTRSLV Y+ARNYR LG++L+DL QAGN+
Sbjct: 293 LRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLMQAGNL 352
Query: 1177 GVLQGAERFDHTRGYRFSTYIQYWI 1251
G+LQGAERFDH+RGYRFSTY+QYWI
Sbjct: 353 GLLQGAERFDHSRGYRFSTYVQYWI 377
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 291 bits (746), Expect = 3e-76
Identities = 175/385 (45%), Positives = 235/385 (61%), Gaps = 7/385 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXX-VRGKEASYESPRMSILSVIPEESEVLYK 294
MG GF L+ K FPI VRG+E S+ S +S LSVI EE E K
Sbjct: 1 MGLGFRLNLKCGFPIHNSHWQTNSPSKLPSSSVRGREGSFSSAGLSFLSVISEECETSSK 60
Query: 295 DSLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRL 474
D LK Y+ S Q++++ + EE KM R S N IDD S A
Sbjct: 61 DPLKVYTCPSASPQLLDDGLSEMEE-KMNPRRMSKSGSANMIDDKEYSFMSSAGL----- 114
Query: 475 QVNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEP 654
+TS ++ L++N+ +EE F D+ V KLEK+IL+QLG+LGA+KLF +CLSRTL
Sbjct: 115 ---RTSHYTLLLQNLNVLEETFADSGVSKLEKEILLQLGRLGALKLFEICLSRTL----- 166
Query: 655 TLSTPIPITELPRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKSSKISSPPLSFK 834
S+ + ++++P + + K NI+ SK S L K
Sbjct: 167 KTSSFLDLSDIPTEPIEKHKTERK--NIV---RSGKKEEQKSRKRTSYDSKKFSGTLPVK 221
Query: 835 TISKVPQRENPS------NSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVIS 996
+ + ++ NPS NS +RRL++AK E++MS+GVK A+LER++ +LE ETG+V +
Sbjct: 222 QMREGFKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETGKVPT 281
Query: 997 FSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNV 1176
CWAEAAGVDEKVLQQ+LHFGWYC+D+L+RSTRSLV Y+ARNYR LG++L+DL QAGN+
Sbjct: 282 LRCWAEAAGVDEKVLQQQLHFGWYCQDELVRSTRSLVLYLARNYRGLGVALDDLLQAGNL 341
Query: 1177 GVLQGAERFDHTRGYRFSTYIQYWI 1251
G+LQGAERFD +RGYRFSTY+QYWI
Sbjct: 342 GLLQGAERFDPSRGYRFSTYVQYWI 366
>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553990|gb|ESR64004.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 442
Score = 281 bits (720), Expect = 3e-73
Identities = 167/385 (43%), Positives = 229/385 (59%), Gaps = 7/385 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKD 297
MG GF L+ KWV P+ VRG+E S+ S R+S LS I E+S ++D
Sbjct: 1 MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60
Query: 298 SLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQ 477
+KAY+ SF + Q +EN + EE++ K TS QD +S S RL
Sbjct: 61 PVKAYTCSFVNTQTVENDYSETEEIRQK--------------STSCIGQDASSRSDFRL- 105
Query: 478 VNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPT 657
LMEN++ +E F D+D ++LE++IL QLGKLGA+KLF+ LSR +
Sbjct: 106 ---------LMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIV-----K 151
Query: 658 LSTPIPITEL-PRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKS---SKISSPPL 825
S + ++++ + +N D +G I+V E+S S +S P
Sbjct: 152 TSNVLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSE 211
Query: 826 SFKTISKVPQRENPS---NSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVIS 996
+ + K P +P NS RRL+IA+ E++MS GV+ ANLERI+T+LE E+G+ S
Sbjct: 212 ALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAAS 271
Query: 997 FSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNV 1176
+CWA+AAGV E+VL+Q L FGWYCR++L++STR LV ++ARNYR LGI DL QAGNV
Sbjct: 272 LNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNV 331
Query: 1177 GVLQGAERFDHTRGYRFSTYIQYWI 1251
GVLQGAERFDHTRGY+FSTY+QYWI
Sbjct: 332 GVLQGAERFDHTRGYKFSTYVQYWI 356
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 281 bits (720), Expect = 3e-73
Identities = 167/385 (43%), Positives = 229/385 (59%), Gaps = 7/385 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKD 297
MG GF L+ KWV P+ VRG+E S+ S R+S LS I E+S ++D
Sbjct: 1 MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60
Query: 298 SLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQ 477
+KAY+ SF + Q +EN + EE++ K TS QD +S S RL
Sbjct: 61 PVKAYTCSFVNTQTVENDYSETEEIRQK--------------STSCIGQDASSRSDFRL- 105
Query: 478 VNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPT 657
LMEN++ +E F D+D ++LE++IL QLGKLGA+KLF+ LSR +
Sbjct: 106 ---------LMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIV-----K 151
Query: 658 LSTPIPITEL-PRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKS---SKISSPPL 825
S + ++++ + +N D +G I+V E+S S +S P
Sbjct: 152 TSNVLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSE 211
Query: 826 SFKTISKVPQRENPS---NSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVIS 996
+ + K P +P NS RRL+IA+ E++MS GV+ ANLERI+T+LE E+G+ S
Sbjct: 212 ALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAAS 271
Query: 997 FSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNV 1176
+CWA+AAGV E+VL+Q L FGWYCR++L++STR LV ++ARNYR LGI DL QAGNV
Sbjct: 272 LNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNV 331
Query: 1177 GVLQGAERFDHTRGYRFSTYIQYWI 1251
GVLQGAERFDHTRGY+FSTY+QYWI
Sbjct: 332 GVLQGAERFDHTRGYKFSTYVQYWI 356
>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917506|ref|XP_006450759.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553984|gb|ESR63998.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553985|gb|ESR63999.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 383
Score = 281 bits (720), Expect = 3e-73
Identities = 167/385 (43%), Positives = 229/385 (59%), Gaps = 7/385 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKD 297
MG GF L+ KWV P+ VRG+E S+ S R+S LS I E+S ++D
Sbjct: 1 MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60
Query: 298 SLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQ 477
+KAY+ SF + Q +EN + EE++ K TS QD +S S RL
Sbjct: 61 PVKAYTCSFVNTQTVENDYSETEEIRQK--------------STSCIGQDASSRSDFRL- 105
Query: 478 VNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPT 657
LMEN++ +E F D+D ++LE++IL QLGKLGA+KLF+ LSR +
Sbjct: 106 ---------LMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIV-----K 151
Query: 658 LSTPIPITEL-PRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKS---SKISSPPL 825
S + ++++ + +N D +G I+V E+S S +S P
Sbjct: 152 TSNVLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSE 211
Query: 826 SFKTISKVPQRENPS---NSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVIS 996
+ + K P +P NS RRL+IA+ E++MS GV+ ANLERI+T+LE E+G+ S
Sbjct: 212 ALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAAS 271
Query: 997 FSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNV 1176
+CWA+AAGV E+VL+Q L FGWYCR++L++STR LV ++ARNYR LGI DL QAGNV
Sbjct: 272 LNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNV 331
Query: 1177 GVLQGAERFDHTRGYRFSTYIQYWI 1251
GVLQGAERFDHTRGY+FSTY+QYWI
Sbjct: 332 GVLQGAERFDHTRGYKFSTYVQYWI 356
>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917512|ref|XP_006450762.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553983|gb|ESR63997.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553988|gb|ESR64002.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 381
Score = 281 bits (720), Expect = 3e-73
Identities = 167/385 (43%), Positives = 229/385 (59%), Gaps = 7/385 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKD 297
MG GF L+ KWV P+ VRG+E S+ S R+S LS I E+S ++D
Sbjct: 1 MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60
Query: 298 SLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQ 477
+KAY+ SF + Q +EN + EE++ K TS QD +S S RL
Sbjct: 61 PVKAYTCSFVNTQTVENDYSETEEIRQK--------------STSCIGQDASSRSDFRL- 105
Query: 478 VNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPT 657
LMEN++ +E F D+D ++LE++IL QLGKLGA+KLF+ LSR +
Sbjct: 106 ---------LMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIV-----K 151
Query: 658 LSTPIPITEL-PRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKS---SKISSPPL 825
S + ++++ + +N D +G I+V E+S S +S P
Sbjct: 152 TSNVLDLSDVHTEEQKMNDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSE 211
Query: 826 SFKTISKVPQRENPS---NSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVIS 996
+ + K P +P NS RRL+IA+ E++MS GV+ ANLERI+T+LE E+G+ S
Sbjct: 212 ALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAAS 271
Query: 997 FSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNV 1176
+CWA+AAGV E+VL+Q L FGWYCR++L++STR LV ++ARNYR LGI DL QAGNV
Sbjct: 272 LNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNV 331
Query: 1177 GVLQGAERFDHTRGYRFSTYIQYWI 1251
GVLQGAERFDHTRGY+FSTY+QYWI
Sbjct: 332 GVLQGAERFDHTRGYKFSTYVQYWI 356
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 276 bits (707), Expect = 1e-71
Identities = 164/385 (42%), Positives = 227/385 (58%), Gaps = 7/385 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKD 297
MG GF L+ KWV P+ VRG+E S+ S R+S LS I E+S ++D
Sbjct: 1 MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60
Query: 298 SLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQ 477
+KAY+ SF + Q +EN + EE++ K TS QD +S S RL
Sbjct: 61 PVKAYTCSFVNTQTVENDYSETEEIRQK--------------STSCIGQDASSRSDFRL- 105
Query: 478 VNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPT 657
LMEN++ +E F D+D ++LE++IL QLGKLGA+KLF+ LSR +
Sbjct: 106 ---------LMENLDVLESTFADSDALRLEREILQQLGKLGALKLFNSHLSRIV-----K 151
Query: 658 LSTPIPITEL-PRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKSSK---ISSPPL 825
S + ++++ + ++ D +G I+V E+S + +S P
Sbjct: 152 TSNVLDLSDVHTEEQKMDDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETYLLSLPSE 211
Query: 826 SFKTISKVP---QRENPSNSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVIS 996
+ + K P E NS RRL+IA+ E++MS GV+ ANLERI+T+LE E+G+
Sbjct: 212 ALQEGLKQPTIFSAERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAAR 271
Query: 997 FSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNV 1176
+CWA+AAGV E+VL+Q L FGWYCR++L++STR LV ++ARNYR LGI DL QAGNV
Sbjct: 272 LNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSDLLQAGNV 331
Query: 1177 GVLQGAERFDHTRGYRFSTYIQYWI 1251
GVLQGAERFDHTRGY+FSTY+QYWI
Sbjct: 332 GVLQGAERFDHTRGYKFSTYVQYWI 356
>ref|XP_006853783.1| hypothetical protein AMTR_s00056p00209700 [Amborella trichopoda]
gi|548857444|gb|ERN15250.1| hypothetical protein
AMTR_s00056p00209700 [Amborella trichopoda]
Length = 529
Score = 269 bits (688), Expect = 2e-69
Identities = 158/355 (44%), Positives = 213/355 (60%), Gaps = 8/355 (2%)
Frame = +1
Query: 211 VRGKEASYESPRMSILSVIPEESEVLYKDSLKAYSSSFGSLQIIENQSGDKEEMKMKIGR 390
V+ K+ S ES + S LSVIPEE+E L D K + FG +Q + EEMKM I +
Sbjct: 7 VKSKQPSIESAKASTLSVIPEETERLLGDCTKDFPYFFGDIQNANSSHDITEEMKMNINK 66
Query: 391 GSHRTLYNPIDDTSVSIQDDASTSYPRLQVNKTSCFSSLMENIEKIEEIFVDADVVKLEK 570
ID + I +D ++ L FS L EN+EKIE I VD+ +LE+
Sbjct: 67 NKPDASLYVIDKAELPIAEDTFSNVAGLPH-----FSFLFENLEKIEGIIVDSGNARLER 121
Query: 571 DILIQLGKLGAIKLFHVCLSRTLGLKEPTLSTPIPITELPRDSPINGPIDDKVGNIIVXX 750
+IL+ + +LGA+KLFH LSRTL K+P + + +T + + P+D++ IV
Sbjct: 122 EILLHIERLGALKLFHAFLSRTL--KDPKI---LDVTGTCPEHAMVQPMDEQADGYIVSS 176
Query: 751 XXXXXXXXXXXXALEKSSKISSPPLSFKTISK--------VPQRENPSNSMTRRLIIAKK 906
AL+K + S K + K + + +P NS +R + A+
Sbjct: 177 GKKVERKAQRERALKKVTDEPIVCSSLKRVKKSTKSINAALTHKGHPGNSKSRSHLRAQS 236
Query: 907 ESKMSIGVKEAANLERIRTSLEAETGQVISFSCWAEAAGVDEKVLQQRLHFGWYCRDKLL 1086
E +MS GV+E A LE+IR +LE G+ SFS WAEAAG++EKVL+Q+LHFGW+CRDKLL
Sbjct: 237 EVEMSRGVQEVAKLEKIRANLEENLGRDASFSVWAEAAGINEKVLKQQLHFGWFCRDKLL 296
Query: 1087 RSTRSLVFYIARNYRRLGISLEDLRQAGNVGVLQGAERFDHTRGYRFSTYIQYWI 1251
RSTR LV Y+A++YR GI EDL QAG++GVLQGAERFDHTRGYRFSTY+QYWI
Sbjct: 297 RSTRPLVMYLAKSYRGRGIGFEDLLQAGSLGVLQGAERFDHTRGYRFSTYVQYWI 351
>emb|CAD20832.1| sigma factor [Spinacia oleracea]
Length = 548
Score = 268 bits (684), Expect = 5e-69
Identities = 161/384 (41%), Positives = 222/384 (57%), Gaps = 6/384 (1%)
Frame = +1
Query: 118 MGFGFMLDS-KWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYK 294
MGFG L+ + V P RGKE + S R+S+L++ +ESE L K
Sbjct: 1 MGFGCKLNMMRCVLPSLRSPFTTNSSPPCSTSFRGKELDFGSARLSLLTIGFDESETLRK 60
Query: 295 DSLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRL 474
D+L+ ++ S +EN D ++ I + S + L I DT V D S +
Sbjct: 61 DTLRPHAGSSSVPLTVEN---DYSNLETTISKRSCKDL---ISDTEVLSDRDVSVYVRSV 114
Query: 475 QVNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEP 654
Q S F +LM NI +E D++++KLEKDIL+QLG+LGA++LFH CLSR + + +
Sbjct: 115 QSCSASHFHTLMANINLLENKVSDSELLKLEKDILVQLGRLGALQLFHACLSRIIDMSD- 173
Query: 655 TLSTPIPITELPRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKSSKISSPPLSFK 834
P ITE D N D+++ +V L+ S+ S
Sbjct: 174 ---LPGLITE---DGKANVRKDNELKKKLVFSKRKEERKLRQERRLQASTSKRCACKSES 227
Query: 835 TISK-----VPQRENPSNSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVISF 999
+I V + + RR IIAK E++MS G+K A LE+++ +LE ETG+ +S
Sbjct: 228 SIESSIHHVVSTAAKKTKARGRRAIIAKNEAEMSRGIKVVAQLEKVKLTLEKETGKAVSL 287
Query: 1000 SCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNVG 1179
+CWAEAAG+DEKVLQ LHFGWYCRD+LL+S RSLV Y++R YR LG++ EDL QAGN+G
Sbjct: 288 NCWAEAAGIDEKVLQHDLHFGWYCRDELLKSGRSLVLYLSRYYRGLGVAHEDLMQAGNIG 347
Query: 1180 VLQGAERFDHTRGYRFSTYIQYWI 1251
+LQGAERFDHTRGY+FSTY+QYWI
Sbjct: 348 ILQGAERFDHTRGYQFSTYVQYWI 371
>ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus]
gi|449507267|ref|XP_004162982.1| PREDICTED: RNA
polymerase sigma factor sigC-like [Cucumis sativus]
Length = 559
Score = 266 bits (680), Expect = 1e-68
Identities = 159/384 (41%), Positives = 224/384 (58%), Gaps = 6/384 (1%)
Frame = +1
Query: 118 MGFGFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKD 297
MG F + +W F I +G+EA++ S R+S S I EE E + ++
Sbjct: 1 MGTSFRPNLRWGFQIQTHSLKNSPSKLSPHASKGREAAFNSGRLSFFSSICEEGESIPRE 60
Query: 298 SLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQ 477
+LK Y+ + Q N + EE++M G S ++ I T S +D +S L
Sbjct: 61 TLKTYTCLSEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKSTRPSKVEDNFSSCTSLP 120
Query: 478 VNKTSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPT 657
K S F LMEN++ +EE F ++ ++ LE+DI++QL KLGA++ F+ CLSRTL
Sbjct: 121 TGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFH 180
Query: 658 LSTPIPITELPRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKSSKISSPPLSFKT 837
S+ +PI E D +N +D+ N+ V A++ + KI+S L+ +
Sbjct: 181 DSSGLPI-EGGEDHNVNQKTNDQNDNVTVYSAKKAGRRSVKKRAMDNADKIASRLLTTRA 239
Query: 838 I------SKVPQRENPSNSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVISF 999
+ S V R+ SNS RRLI+A E++MS GVK ANLERIR +LE E+G++ S
Sbjct: 240 VKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIRETLEKESGRIASM 299
Query: 1000 SCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNVG 1179
SCWAEAA VD K LQ++L FG +CRD+LLRST SLV ++A+ YR G+ +EDL QAG +G
Sbjct: 300 SCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSGLPMEDLVQAGALG 359
Query: 1180 VLQGAERFDHTRGYRFSTYIQYWI 1251
VLQG ERFD RG+R STYIQYWI
Sbjct: 360 VLQGVERFDPKRGFRISTYIQYWI 383
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
Length = 555
Score = 264 bits (675), Expect = 5e-68
Identities = 157/385 (40%), Positives = 218/385 (56%), Gaps = 10/385 (2%)
Frame = +1
Query: 127 GFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKDSLK 306
GF L KW F + +G+EA Y+ P S+ I + E + D +
Sbjct: 2 GFRLHLKWGFSVQPPFSSNSSSWPSSHSFKGREALYD-PARSLKPFITGDCEPSHSDPFR 60
Query: 307 AYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQVNK 486
+ Q+ + + E+K + GRGS +Y I + I D L K
Sbjct: 61 V-QTCLSDPQLWTSDTSVTTEIKTRNGRGSPSNVYGDIGSHKIGISPDGEKP-TYLNTTK 118
Query: 487 TSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPTLST 666
+ FS LM+N++ +E +F D+++ +LE+DIL+QL KLGA++ FH CLSRT ST
Sbjct: 119 SLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRT-----HHSST 173
Query: 667 PIPITELPRDSPINGPIDDKVGNIIVXXXXXXXXXXXXXXALEKSSKISSPPLSFKTISK 846
+ ++PR+ DD VGN I ++S+ ++ ++ + +K
Sbjct: 174 FPKVLDVPRELIKEVEKDDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTK 233
Query: 847 VPQRE----------NPSNSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVIS 996
Q + S +R IAK E++MS GVK A LERIR+ LE ETG+V +
Sbjct: 234 NIQEDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVAT 293
Query: 997 FSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNV 1176
FS WAEAAG+++K LQQRLHFGWYCRD+LL+STRSLV Y+ARNYR LG++ EDL QAGN+
Sbjct: 294 FSSWAEAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNM 353
Query: 1177 GVLQGAERFDHTRGYRFSTYIQYWI 1251
GVLQGA RFDHTRGY+FSTY+QYWI
Sbjct: 354 GVLQGAVRFDHTRGYKFSTYVQYWI 378
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 257 bits (657), Expect = 6e-66
Identities = 158/385 (41%), Positives = 218/385 (56%), Gaps = 10/385 (2%)
Frame = +1
Query: 127 GFMLDSKWVFPIXXXXXXXXXXXXXXXXVRGKEASYESPRMSILSVIPEESEVLYKDSLK 306
GF L KW F + +G+E Y+ P S+ I + E + D +
Sbjct: 2 GFRLHLKWGFSLQPPFSSNSSSWPSSHSFKGRETLYD-PARSLKPFINGDCEPSHSDPFR 60
Query: 307 AYSSSFGSLQIIENQSGDKEEMKMKIGRGSHRTLYNPIDDTSVSIQDDASTSYPRLQVNK 486
+ Q+ + + E K + GRGS +Y I + D +Y L K
Sbjct: 61 V-QTCLSDPQLWTSDASVTTETKTRNGRGSPSNVYGDIGSYKI---DGEKPTY--LNTTK 114
Query: 487 TSCFSSLMENIEKIEEIFVDADVVKLEKDILIQLGKLGAIKLFHVCLSRTLGLKEPTLST 666
+ FS LM+N++ +E +F D+++ +LE+DIL+QL KLGA++ FH CLSRT + S
Sbjct: 115 SLHFSLLMKNLDLLENMFADSEMSRLERDILVQLEKLGALEFFHTCLSRT----HHSSSF 170
Query: 667 PIPITELPRDSPINGPIDDKVGN----IIVXXXXXXXXXXXXXXALEKSSKISSPPLSFK 834
P + ++PR+ DD VGN ++V A ++ I + K
Sbjct: 171 P-KVLDVPRELIKEVEKDDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTK 229
Query: 835 TISKVPQR------ENPSNSMTRRLIIAKKESKMSIGVKEAANLERIRTSLEAETGQVIS 996
I + Q+ + S T+R IAK E++MS GVK A LERIR+ LE ETGQV +
Sbjct: 230 NIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVAT 289
Query: 997 FSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRSTRSLVFYIARNYRRLGISLEDLRQAGNV 1176
FS WA+AAG+++K LQQ LHFGWYCRD+LL+STRSLV Y+ARNYR LG++ EDL QAGN+
Sbjct: 290 FSSWAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNM 349
Query: 1177 GVLQGAERFDHTRGYRFSTYIQYWI 1251
GVLQGA RFDHTRGY+FSTY+QYWI
Sbjct: 350 GVLQGAVRFDHTRGYKFSTYVQYWI 374
>ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC isoform X3 [Glycine max]
Length = 459
Score = 254 bits (649), Expect = 5e-65
Identities = 151/353 (42%), Positives = 217/353 (61%), Gaps = 9/353 (2%)
Frame = +1
Query: 220 KEASYESPRMSILSVIPEESEVLYKDSLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSH 399
+E + R+S S EE E L KD + ++ S +L+ +EN S +EE ++ G+ S
Sbjct: 40 RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99
Query: 400 RTLYNPIDDTSVSIQDDASTSYPRLQVNKTSCFSSLMENIEKIEEIFVDADVVKLEKDIL 579
+++ ID+T + + ST + + + F LMEN+ +EE FVD++ ++LEK I+
Sbjct: 100 SSVHKMIDNTQMPF-GEVSTVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAII 158
Query: 580 IQLGKLGAIKLFHVCLSRTLGLKEPTLSTPIPITELPRDSPINGPIDDKVGNIIVXXXXX 759
+QLGKLGA++LF+VCLSR+LG T L S +DD ++V
Sbjct: 159 LQLGKLGALELFNVCLSRSLG------------TSLV--SNYADKVDDYKDKVVVQSSKK 204
Query: 760 XXXXXXXXXALEKSSKISSPPLSFK---------TISKVPQRENPSNSMTRRLIIAKKES 912
S+ +SS L+ K + S V + N N +R+++AK+E+
Sbjct: 205 KENKTRRKREFV-STAVSSQSLTLKANQEDLLGFSASLVKRAPNTKN---KRILVAKREA 260
Query: 913 KMSIGVKEAANLERIRTSLEAETGQVISFSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRS 1092
+MS GVK A LE+IRT++E +T +V S S WAEA+GVDEKVLQ+ LH G+YC+D+L+RS
Sbjct: 261 EMSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGVDEKVLQKLLHRGYYCQDELIRS 320
Query: 1093 TRSLVFYIARNYRRLGISLEDLRQAGNVGVLQGAERFDHTRGYRFSTYIQYWI 1251
TRSLV Y+AR YR +GI+L+DL QAG VGVLQGAERFD TRGY+FSTY+QYWI
Sbjct: 321 TRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWI 373
>ref|XP_006601059.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Glycine max]
Length = 476
Score = 254 bits (649), Expect = 5e-65
Identities = 151/353 (42%), Positives = 217/353 (61%), Gaps = 9/353 (2%)
Frame = +1
Query: 220 KEASYESPRMSILSVIPEESEVLYKDSLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSH 399
+E + R+S S EE E L KD + ++ S +L+ +EN S +EE ++ G+ S
Sbjct: 40 RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99
Query: 400 RTLYNPIDDTSVSIQDDASTSYPRLQVNKTSCFSSLMENIEKIEEIFVDADVVKLEKDIL 579
+++ ID+T + + ST + + + F LMEN+ +EE FVD++ ++LEK I+
Sbjct: 100 SSVHKMIDNTQMPF-GEVSTVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAII 158
Query: 580 IQLGKLGAIKLFHVCLSRTLGLKEPTLSTPIPITELPRDSPINGPIDDKVGNIIVXXXXX 759
+QLGKLGA++LF+VCLSR+LG T L S +DD ++V
Sbjct: 159 LQLGKLGALELFNVCLSRSLG------------TSLV--SNYADKVDDYKDKVVVQSSKK 204
Query: 760 XXXXXXXXXALEKSSKISSPPLSFK---------TISKVPQRENPSNSMTRRLIIAKKES 912
S+ +SS L+ K + S V + N N +R+++AK+E+
Sbjct: 205 KENKTRRKREFV-STAVSSQSLTLKANQEDLLGFSASLVKRAPNTKN---KRILVAKREA 260
Query: 913 KMSIGVKEAANLERIRTSLEAETGQVISFSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRS 1092
+MS GVK A LE+IRT++E +T +V S S WAEA+GVDEKVLQ+ LH G+YC+D+L+RS
Sbjct: 261 EMSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGVDEKVLQKLLHRGYYCQDELIRS 320
Query: 1093 TRSLVFYIARNYRRLGISLEDLRQAGNVGVLQGAERFDHTRGYRFSTYIQYWI 1251
TRSLV Y+AR YR +GI+L+DL QAG VGVLQGAERFD TRGY+FSTY+QYWI
Sbjct: 321 TRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWI 373
>ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Glycine max]
Length = 551
Score = 254 bits (649), Expect = 5e-65
Identities = 151/353 (42%), Positives = 217/353 (61%), Gaps = 9/353 (2%)
Frame = +1
Query: 220 KEASYESPRMSILSVIPEESEVLYKDSLKAYSSSFGSLQIIENQSGDKEEMKMKIGRGSH 399
+E + R+S S EE E L KD + ++ S +L+ +EN S +EE ++ G+ S
Sbjct: 40 RETCFNFTRLSFPSTFYEEGEALQKDFGRVFAFSSSALETLENDSLGREETQVNKGKRSL 99
Query: 400 RTLYNPIDDTSVSIQDDASTSYPRLQVNKTSCFSSLMENIEKIEEIFVDADVVKLEKDIL 579
+++ ID+T + + ST + + + F LMEN+ +EE FVD++ ++LEK I+
Sbjct: 100 SSVHKMIDNTQMPF-GEVSTVSKKFESFRAQHFRLLMENLCVLEETFVDSEALRLEKAII 158
Query: 580 IQLGKLGAIKLFHVCLSRTLGLKEPTLSTPIPITELPRDSPINGPIDDKVGNIIVXXXXX 759
+QLGKLGA++LF+VCLSR+LG T L S +DD ++V
Sbjct: 159 LQLGKLGALELFNVCLSRSLG------------TSLV--SNYADKVDDYKDKVVVQSSKK 204
Query: 760 XXXXXXXXXALEKSSKISSPPLSFK---------TISKVPQRENPSNSMTRRLIIAKKES 912
S+ +SS L+ K + S V + N N +R+++AK+E+
Sbjct: 205 KENKTRRKREFV-STAVSSQSLTLKANQEDLLGFSASLVKRAPNTKN---KRILVAKREA 260
Query: 913 KMSIGVKEAANLERIRTSLEAETGQVISFSCWAEAAGVDEKVLQQRLHFGWYCRDKLLRS 1092
+MS GVK A LE+IRT++E +T +V S S WAEA+GVDEKVLQ+ LH G+YC+D+L+RS
Sbjct: 261 EMSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGVDEKVLQKLLHRGYYCQDELIRS 320
Query: 1093 TRSLVFYIARNYRRLGISLEDLRQAGNVGVLQGAERFDHTRGYRFSTYIQYWI 1251
TRSLV Y+AR YR +GI+L+DL QAG VGVLQGAERFD TRGY+FSTY+QYWI
Sbjct: 321 TRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTRGYKFSTYVQYWI 373