BLASTX nr result
ID: Akebia24_contig00005588
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00005588
(1293 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007050597.1| Ribosome recycling factor isoform 1 [Theobro... 362 1e-97
ref|XP_007050598.1| Ribosome recycling factor isoform 2 [Theobro... 349 1e-93
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides] 339 1e-90
ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citr... 339 2e-90
ref|XP_002302112.2| Ribosome recycling factor family protein [Po... 338 3e-90
ref|XP_004290648.1| PREDICTED: ribosome-recycling factor, chloro... 331 4e-88
emb|CBI28691.3| unnamed protein product [Vitis vinifera] 328 4e-87
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro... 325 3e-86
ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloro... 317 7e-84
gb|EXB39377.1| Ribosome-recycling factor [Morus notabilis] 312 2e-82
gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea] 310 1e-81
ref|XP_007050599.1| Ribosome recycling factor isoform 3 [Theobro... 307 6e-81
sp|P82231.1|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, ... 305 3e-80
ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloro... 303 1e-79
ref|XP_007144638.1| hypothetical protein PHAVU_007G172400g [Phas... 302 2e-79
ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloro... 301 4e-79
ref|XP_004495199.1| PREDICTED: ribosome-recycling factor, chloro... 294 7e-77
sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, ... 292 2e-76
ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycin... 291 6e-76
gb|AFK38022.1| unknown [Medicago truncatula] 282 3e-73
>ref|XP_007050597.1| Ribosome recycling factor isoform 1 [Theobroma cacao]
gi|508702858|gb|EOX94754.1| Ribosome recycling factor
isoform 1 [Theobroma cacao]
Length = 277
Score = 362 bits (930), Expect = 1e-97
Identities = 194/280 (69%), Positives = 223/280 (79%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVRI 905
MA PFSS S+V S+++P NPPKS LS DS +G DC+K S +N+ SWSSAANY R+
Sbjct: 1 MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60
Query: 904 QEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENFN 725
+ G SK S KP V ++KR G+ RCAT KD K RMEKTIE+VR NFN
Sbjct: 61 RHGASKLSGKPFVV---LRKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFN 117
Query: 724 AVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSA 545
++RTGRANPA+LD+VEVEYYG+PVSLKSIAQISTPD+SSLLVQPYDKSSLKAIEKAIV++
Sbjct: 118 SIRTGRANPAILDKVEVEYYGTPVSLKSIAQISTPDSSSLLVQPYDKSSLKAIEKAIVNS 177
Query: 544 DLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXXX 365
DLG+TPNNDGEVIRLS+PQLT+ERRKELSK V+KQAEEGKVA+RNIRRDA+K Y
Sbjct: 178 DLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKE 237
Query: 364 XXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKDLSSDLQKLTDEYMKKID+I KQKEKELL V
Sbjct: 238 KKLSEDNVKDLSSDLQKLTDEYMKKIDSIFKQKEKELLTV 277
>ref|XP_007050598.1| Ribosome recycling factor isoform 2 [Theobroma cacao]
gi|508702859|gb|EOX94755.1| Ribosome recycling factor
isoform 2 [Theobroma cacao]
Length = 300
Score = 349 bits (896), Expect = 1e-93
Identities = 194/303 (64%), Positives = 223/303 (73%), Gaps = 23/303 (7%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVRI 905
MA PFSS S+V S+++P NPPKS LS DS +G DC+K S +N+ SWSSAANY R+
Sbjct: 1 MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60
Query: 904 QEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENFN 725
+ G SK S KP V ++KR G+ RCAT KD K RMEKTIE+VR NFN
Sbjct: 61 RHGASKLSGKPFVV---LRKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFN 117
Query: 724 AVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSA 545
++RTGRANPA+LD+VEVEYYG+PVSLKSIAQISTPD+SSLLVQPYDKSSLKAIEKAIV++
Sbjct: 118 SIRTGRANPAILDKVEVEYYGTPVSLKSIAQISTPDSSSLLVQPYDKSSLKAIEKAIVNS 177
Query: 544 DLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXXX 365
DLG+TPNNDGEVIRLS+PQLT+ERRKELSK V+KQAEEGKVA+RNIRRDA+K Y
Sbjct: 178 DLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKE 237
Query: 364 XXXXEDNVKDLSSDL-----------------------QKLTDEYMKKIDAINKQKEKEL 254
EDNVKDLSSDL QKLTDEYMKKID+I KQKEKEL
Sbjct: 238 KKLSEDNVKDLSSDLQISQLGGLQIPLSTQVCEIFSFMQKLTDEYMKKIDSIFKQKEKEL 297
Query: 253 LKV 245
L V
Sbjct: 298 LTV 300
>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 286
Score = 339 bits (870), Expect = 1e-90
Identities = 186/286 (65%), Positives = 218/286 (76%), Gaps = 6/286 (2%)
Frame = -3
Query: 1084 MAIPFSSASS---VRSLYQPILNPPKSPLSVRDSHYRGTDCMK---HLSPFMNMSSWSSA 923
MA PFSS ++ +RS++QP NPPK+ LS+ S +RG K + ++S WSS+
Sbjct: 1 MAAPFSSPTTPPPLRSIFQPNPNPPKALLSLTGSFHRGPHRAKVGYNSIGAASVSLWSSS 60
Query: 922 ANYVRIQEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIES 743
ANY ++ G SK S KP+ K+ +Q R G+ R AT D K RMEKTI++
Sbjct: 61 ANYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDT 120
Query: 742 VRENFNAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIE 563
+R NFN+VRTGRANP+MLD++EVEYYG+PVSLKSIAQISTPDASSLLVQPYDKSSLKAIE
Sbjct: 121 MRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIE 180
Query: 562 KAIVSADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTY 383
KAIVS+DLGLTPNNDGEVIR+S+PQLTSERRKELSK V+K AEEGKVALRNIRRDA+K Y
Sbjct: 181 KAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKAY 240
Query: 382 XXXXXXXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKDLSSDLQKLTDEYMKK+D I KQKEKELLKV
Sbjct: 241 EKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286
>ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
gi|568852089|ref|XP_006479713.1| PREDICTED:
ribosome-recycling factor, chloroplastic-like [Citrus
sinensis] gi|557546326|gb|ESR57304.1| hypothetical
protein CICLE_v10021605mg [Citrus clementina]
Length = 276
Score = 339 bits (869), Expect = 2e-90
Identities = 183/280 (65%), Positives = 215/280 (76%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVRI 905
MA FSS +RS++Q NPPK L + DS +R + + +++ WSSAANY R+
Sbjct: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
Query: 904 QEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENFN 725
K S+KPIV +Q KR G+ RCAT KDVK RME+TI+ VR NFN
Sbjct: 61 V----KLSNKPIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNFN 116
Query: 724 AVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSA 545
+VRTGR+NPAMLD++EVEYYGSPVSLKSIAQI+TPD+SSLL+QPYDKSSLK+IEKAIVS+
Sbjct: 117 SVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSS 176
Query: 544 DLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXXX 365
DLG+TPNNDGEVIRL++PQLTSERRKELSK V+KQAEEGKVA+RNIRRDA+K Y
Sbjct: 177 DLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKE 236
Query: 364 XXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKDLSSDLQKLTDEYMKKID+I KQKEKELLKV
Sbjct: 237 KKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQKEKELLKV 276
>ref|XP_002302112.2| Ribosome recycling factor family protein [Populus trichocarpa]
gi|550344331|gb|EEE81385.2| Ribosome recycling factor
family protein [Populus trichocarpa]
Length = 286
Score = 338 bits (867), Expect = 3e-90
Identities = 185/287 (64%), Positives = 218/287 (75%), Gaps = 7/287 (2%)
Frame = -3
Query: 1084 MAIPFSSASS---VRSLYQPILNPPKSPLSVRDSHYRGTD----CMKHLSPFMNMSSWSS 926
MA PFSS ++ +RS++QP NPPK+ LS+ S +RG C + ++S WSS
Sbjct: 1 MAAPFSSPTTPPPLRSIFQPNPNPPKALLSLPGSFHRGPHRAKVCYNSIGA-TSVSLWSS 59
Query: 925 AANYVRIQEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIE 746
+ANY ++ G +K S KP+ K+ +Q R G+ R AT D K RMEKTI+
Sbjct: 60 SANYSSLRNGSTKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTID 119
Query: 745 SVRENFNAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAI 566
++R NFN+VRTGRANP+MLD++EVEYYG+PVSLKSIAQISTPDASSLLVQPYDKSSLKAI
Sbjct: 120 TMRANFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAI 179
Query: 565 EKAIVSADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKT 386
EKAIVS+DLGLTPNNDGEVIR+S+PQLTSERRKELSK V+K AEEGKVALRNIRRDA+K
Sbjct: 180 EKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKA 239
Query: 385 YXXXXXXXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
Y EDNVKDLSSDLQKLTDEYMKK+D I KQKEKELLKV
Sbjct: 240 YEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286
>ref|XP_004290648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 281
Score = 331 bits (849), Expect = 4e-88
Identities = 178/281 (63%), Positives = 212/281 (75%), Gaps = 1/281 (0%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVRI 905
MA S A+ VRS+ QP NPPK+ LS+RDS+ G K +N+ SWSSAA+YV
Sbjct: 1 MATHLSPANPVRSILQPKQNPPKALLSIRDSYGAGLVWKKCQPSTVNVCSWSSAASYVTP 60
Query: 904 QEGISKFSSKPIVAK-QFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENF 728
G +KFS PIV K Q +QKR G R AT KD K RMEKTIE+VR NF
Sbjct: 61 PGGAAKFSGNPIVVKKQLLQKRAGTVRAATIEEIEAEKSVIEKDAKGRMEKTIETVRSNF 120
Query: 727 NAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVS 548
N++RTGRA+PAMLD++EV+YYGSPV LKS+AQIS+PD +SLL+ PYDKSSLK+IEKAIV+
Sbjct: 121 NSIRTGRASPAMLDKIEVDYYGSPVGLKSLAQISSPDGTSLLISPYDKSSLKSIEKAIVA 180
Query: 547 ADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXX 368
+DLG+TPNNDGEVIRL++PQLTS+RRKEL+K VSKQAEEGKVALRNIRRDA+K Y
Sbjct: 181 SDLGMTPNNDGEVIRLTLPQLTSDRRKELTKVVSKQAEEGKVALRNIRRDALKAYEKLQK 240
Query: 367 XXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
ED +KD SSDLQK TDEY+KK+D I+KQKEKELLKV
Sbjct: 241 EKKLSEDTLKDFSSDLQKWTDEYVKKLDTISKQKEKELLKV 281
>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
Length = 274
Score = 328 bits (840), Expect = 4e-87
Identities = 185/281 (65%), Positives = 215/281 (76%), Gaps = 1/281 (0%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMK-HLSPFMNMSSWSSAANYVR 908
MA+ FS A+ VR+++Q + LS + RG K HL+ + + SAANYVR
Sbjct: 1 MAMTFSPATPVRTIFQ------RKSLSPGGCYCRGPGYEKCHLNIGIAFTL-RSAANYVR 53
Query: 907 IQEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENF 728
+ +G ++S K VAK+ QKRTG++RCAT KDVK+RMEKTIE+VR NF
Sbjct: 54 LGDGAREYSGKLFVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNF 113
Query: 727 NAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVS 548
N++RTGRANPA+LDRVEVEYYG+PVSLKSIAQISTPD++SLLVQPYDKSSLK IEKAIVS
Sbjct: 114 NSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVS 173
Query: 547 ADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXX 368
+DLGLTPNNDGEVIRLS+PQLTSERRKELSK V+KQ EEGKVALRNIRRDA+K Y
Sbjct: 174 SDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEK 233
Query: 367 XXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKDLSSDLQKL DEYMKKI+ I KQKEKELLKV
Sbjct: 234 DKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 274
>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 325 bits (833), Expect = 3e-86
Identities = 181/281 (64%), Positives = 216/281 (76%), Gaps = 1/281 (0%)
Frame = -3
Query: 1084 MAIPFSSASSVR-SLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVR 908
MA PFS+ +S+R SL+Q PPKS LS+RD + G +C+K S ++ SW SA+NYVR
Sbjct: 1 MATPFSATASIRRSLFQN--PPPKSLLSLRD-YNGGLNCVKCGSITAHLCSWKSASNYVR 57
Query: 907 IQEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENF 728
+ S++ V+ + R + R AT KDVK RMEKTI++VR NF
Sbjct: 58 LNRQALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNF 117
Query: 727 NAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVS 548
N++RTGR+NPAMLD++EVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLK+IEKAIV+
Sbjct: 118 NSIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVN 177
Query: 547 ADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXX 368
+DLG+TPNNDGEVIRL++PQLTSERRKELSK V+KQAEEGKVA+RNIRRDA+K Y
Sbjct: 178 SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEK 237
Query: 367 XXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKDLSSDLQKLTD+YMKKID + KQKEKELLKV
Sbjct: 238 EKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV 278
>ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Vitis
vinifera]
Length = 280
Score = 317 bits (812), Expect = 7e-84
Identities = 183/285 (64%), Positives = 212/285 (74%), Gaps = 9/285 (3%)
Frame = -3
Query: 1072 FSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMK-HLSPFMNMSSWSSAANYVRIQEG 896
FS A+ VR+++Q + LS + RG K HL+ + + SAANYVR+ +G
Sbjct: 3 FSPATPVRTIFQ------RKSLSPGGCYCRGPGYEKCHLNIGIAFTL-RSAANYVRLGDG 55
Query: 895 ISKFSSKPIVAKQFVQKR--------TGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESV 740
++S K VAK+ QKR TG++RCAT KDVK+RMEKTIE+V
Sbjct: 56 AREYSGKLFVAKRNFQKRQVESYGYKTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETV 115
Query: 739 RENFNAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEK 560
R NFN++RTGRANPA+LDRVEVEYYG+PVSLKSIAQISTPD++SLLVQPYDKSSLK IEK
Sbjct: 116 RTNFNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEK 175
Query: 559 AIVSADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYX 380
AIVS+DLGLTPNNDGEVIRLS+PQLTSERRKELSK V+KQ EEGKVALRNIRRDA+K Y
Sbjct: 176 AIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYE 235
Query: 379 XXXXXXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKDLSSDLQKL DEYMKKI+ I KQKEKELLKV
Sbjct: 236 KLEKDKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 280
>gb|EXB39377.1| Ribosome-recycling factor [Morus notabilis]
Length = 312
Score = 312 bits (799), Expect = 2e-82
Identities = 172/272 (63%), Positives = 199/272 (73%)
Frame = -3
Query: 1075 PFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVRIQEG 896
PFS + VR +P NP + LS R S+ G C K + +N+ SW SAA+YVR+++G
Sbjct: 5 PFSPPTPVRCSLKPSQNPLRIVLSFRASYGGGPVCAKCMPSRVNVCSWGSAASYVRLRDG 64
Query: 895 ISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENFNAVR 716
K G+ R AT KDVK+RMEK+IE+VR NFN+VR
Sbjct: 65 TDK---------------VGVVRAATIEEIEAEKSLIEKDVKERMEKSIETVRTNFNSVR 109
Query: 715 TGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSADLG 536
TGRANPAMLD++EVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLK IEKAIVS+DLG
Sbjct: 110 TGRANPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKVIEKAIVSSDLG 169
Query: 535 LTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXXXXXX 356
+TPNNDG+VIRL++PQLTSERRKELSK V+KQ EEGKVALRNIRRDA+K Y
Sbjct: 170 MTPNNDGDVIRLTLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEKEKKL 229
Query: 355 XEDNVKDLSSDLQKLTDEYMKKIDAINKQKEK 260
EDNVKDLSSDLQKLTDEYMKKI+ + KQKEK
Sbjct: 230 SEDNVKDLSSDLQKLTDEYMKKIETLFKQKEK 261
>gb|AGV08376.1| ribosome recycling factor [Arachis hypogaea]
Length = 278
Score = 310 bits (793), Expect = 1e-81
Identities = 176/286 (61%), Positives = 213/286 (74%), Gaps = 6/286 (2%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPIL--NPPKSPLSVRDSHYRGTD--CMKHLSPFMNMSSWSSAAN 917
MA FS ++ S+ I NPPK LS+ + G++ C+K SW+S+++
Sbjct: 1 MATSFSPTPTLPSVRSSIFPQNPPKPLLSLPEFFRGGSNSSCVKR--------SWASSSS 52
Query: 916 YVRIQ-EGISKFSSKPIVAK-QFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIES 743
YV ++ + S++P+++K + +R G+ R AT KDVK RME++IES
Sbjct: 53 YVTLKLSNAFRVSARPLLSKGTLLHRRMGIVRAATIEEIEAEKAAIEKDVKIRMERSIES 112
Query: 742 VRENFNAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIE 563
VR NFN++RTGRANPAMLD++EVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIE
Sbjct: 113 VRANFNSIRTGRANPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIE 172
Query: 562 KAIVSADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTY 383
KAIVS+D+G+TPNNDGEVIRL++PQLTSERRKELSK V+KQAEEGKVALRNIRRDA+K Y
Sbjct: 173 KAIVSSDVGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVALRNIRRDALKAY 232
Query: 382 XXXXXXXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKDLSSDLQKLTDEYMKK+D I KQKEKELL V
Sbjct: 233 EKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKELLTV 278
>ref|XP_007050599.1| Ribosome recycling factor isoform 3 [Theobroma cacao]
gi|508702860|gb|EOX94756.1| Ribosome recycling factor
isoform 3 [Theobroma cacao]
Length = 285
Score = 307 bits (787), Expect = 6e-81
Identities = 161/234 (68%), Positives = 189/234 (80%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVRI 905
MA PFSS S+V S+++P NPPKS LS DS +G DC+K S +N+ SWSSAANY R+
Sbjct: 1 MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60
Query: 904 QEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENFN 725
+ G SK S KP V ++KR G+ RCAT KD K RMEKTIE+VR NFN
Sbjct: 61 RHGASKLSGKPFVV---LRKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFN 117
Query: 724 AVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSA 545
++RTGRANPA+LD+VEVEYYG+PVSLKSIAQISTPD+SSLLVQPYDKSSLKAIEKAIV++
Sbjct: 118 SIRTGRANPAILDKVEVEYYGTPVSLKSIAQISTPDSSSLLVQPYDKSSLKAIEKAIVNS 177
Query: 544 DLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTY 383
DLG+TPNNDGEVIRLS+PQLT+ERRKELSK V+KQAEEGKVA+RNIRRDA+K Y
Sbjct: 178 DLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRNIRRDALKAY 231
>sp|P82231.1|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor gi|4689034|emb|CAB41419.1| chloroplast
ribosome recycling factor protein [Spinacia oleracea]
Length = 271
Score = 305 bits (781), Expect = 3e-80
Identities = 157/234 (67%), Positives = 189/234 (80%)
Frame = -3
Query: 946 NMSSWSSAANYVRIQEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKK 767
N+S W S+ANYVR+ G+ KFS K +V KQ +Q R G +RCAT + K+
Sbjct: 39 NVSVWRSSANYVRMDCGVKKFSGKAVVVKQ-LQNRAGTFRCATMEEVEAEKSLIETNTKQ 97
Query: 766 RMEKTIESVRENFNAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYD 587
RMEKTIE++R NFN+VRT RA+P MLDR+EVEYYG+PVSLKSIAQISTPDASSLL+ PYD
Sbjct: 98 RMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDASSLLISPYD 157
Query: 586 KSSLKAIEKAIVSADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNI 407
KSSLKAIEKAIV++ LG++PNNDGEVIRLS+P LTS+RRKEL+K VSK AEEGKVA+RNI
Sbjct: 158 KSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNI 217
Query: 406 RRDAIKTYXXXXXXXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
RRDA+K+Y EDNVKDLS+DLQKLTDEYMKK+++I KQKE+EL+KV
Sbjct: 218 RRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELMKV 271
>ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
tuberosum]
Length = 267
Score = 303 bits (775), Expect = 1e-79
Identities = 160/234 (68%), Positives = 190/234 (81%)
Frame = -3
Query: 946 NMSSWSSAANYVRIQEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKK 767
N+ WS++ANY + G + +P+V + KR+G+ RCAT KDVK+
Sbjct: 37 NVVCWSASANYSSLWVGARRL--QPLVKPSW-GKRSGIVRCATIEEIEAEKSSIEKDVKE 93
Query: 766 RMEKTIESVRENFNAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYD 587
RMEKT+E+VR NFN++RTGRA+PAMLD++EV+YYG+PVSLKSIAQISTPDASS+LVQPYD
Sbjct: 94 RMEKTVETVRSNFNSIRTGRASPAMLDKIEVDYYGTPVSLKSIAQISTPDASSILVQPYD 153
Query: 586 KSSLKAIEKAIVSADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNI 407
KSSLKAIEKAIVS+D+G+TPNNDGEVIRL+VPQLTS+RRKELSK VSKQAEEGKVA+RNI
Sbjct: 154 KSSLKAIEKAIVSSDVGMTPNNDGEVIRLAVPQLTSDRRKELSKIVSKQAEEGKVAIRNI 213
Query: 406 RRDAIKTYXXXXXXXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
RRDA+K Y EDNVKDLSSDLQK+TDEYMKKID + KQKEKELLKV
Sbjct: 214 RRDALKAYEKLEKEKKLSEDNVKDLSSDLQKVTDEYMKKIDTVFKQKEKELLKV 267
>ref|XP_007144638.1| hypothetical protein PHAVU_007G172400g [Phaseolus vulgaris]
gi|561017828|gb|ESW16632.1| hypothetical protein
PHAVU_007G172400g [Phaseolus vulgaris]
Length = 266
Score = 302 bits (773), Expect = 2e-79
Identities = 170/281 (60%), Positives = 204/281 (72%), Gaps = 1/281 (0%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVRI 905
MA FS ++VRSL I NPPK+ LS+ S + S+SS+A+Y +
Sbjct: 1 MATSFSPTTAVRSL---IRNPPKALLSLPHSFHAVK------------LSFSSSASYATL 45
Query: 904 QEGIS-KFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENF 728
+ + S P+++K F +RT L R AT D K RME++I++VR NF
Sbjct: 46 KLPLGFSLSRTPLISKGFSHRRTPLIRAATIEEIEAEKAAIENDAKSRMERSIDNVRTNF 105
Query: 727 NAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVS 548
N++RTGRANPAMLD++EVEYYG+PVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVS
Sbjct: 106 NSIRTGRANPAMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVS 165
Query: 547 ADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXX 368
+DLG+TPNNDGE IRLS+PQLTS+RRKELSK V+KQAEEGKVALRNIRRDA+K Y
Sbjct: 166 SDLGMTPNNDGESIRLSIPQLTSDRRKELSKIVAKQAEEGKVALRNIRRDALKAYDKLEK 225
Query: 367 XXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKD SSDLQKLTD+Y+KK++ I KQKEKELL V
Sbjct: 226 EKKLSEDNVKDFSSDLQKLTDDYIKKVETILKQKEKELLTV 266
>ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 1
[Solanum lycopersicum]
Length = 267
Score = 301 bits (771), Expect = 4e-79
Identities = 159/234 (67%), Positives = 190/234 (81%)
Frame = -3
Query: 946 NMSSWSSAANYVRIQEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKK 767
N+ WS++ANY + G + +P+V + KR+G+ RCAT KDVK+
Sbjct: 37 NVVCWSASANYSSLWVGARRL--QPLVKPSW-GKRSGIVRCATIEEIEAEKSSIEKDVKE 93
Query: 766 RMEKTIESVRENFNAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYD 587
RMEKT+E+VR NFN++RTGRA+PAMLD++EV+YYG+PVSLKSIAQISTPDA+S+LVQPYD
Sbjct: 94 RMEKTVETVRSNFNSIRTGRASPAMLDKIEVDYYGTPVSLKSIAQISTPDATSILVQPYD 153
Query: 586 KSSLKAIEKAIVSADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNI 407
KSSLKAIEKAIVS+D+G+TPNNDGEVIRL+VPQLTS+RRKELSK VSKQAEEGKVA+RNI
Sbjct: 154 KSSLKAIEKAIVSSDVGMTPNNDGEVIRLAVPQLTSDRRKELSKIVSKQAEEGKVAIRNI 213
Query: 406 RRDAIKTYXXXXXXXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
RRDA+K Y EDNVKDLSSDLQK+TDEYMKKID + KQKEKELLKV
Sbjct: 214 RRDALKAYEKLEKEKKLSEDNVKDLSSDLQKVTDEYMKKIDIVFKQKEKELLKV 267
>ref|XP_004495199.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cicer
arietinum]
Length = 265
Score = 294 bits (752), Expect = 7e-77
Identities = 165/288 (57%), Positives = 206/288 (71%), Gaps = 8/288 (2%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFM-NMSSWSSAANYVR 908
MA FS ++RS++Q NPPK PF+ N S++SA++YV
Sbjct: 1 MATSFSPTPTLRSIFQ---NPPK--------------------PFLLNRYSFTSASSYVT 37
Query: 907 IQEG-----ISKFSSKPIVAKQF--VQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTI 749
+ + +P+++K F + KR G+ R AT DVK RME+T+
Sbjct: 38 LNLPRRFTLSGTLTGRPLLSKGFFTLHKRKGIVRAATIEEIEAEKASIENDVKNRMERTL 97
Query: 748 ESVRENFNAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKA 569
E+VR NF+++RTGRANP+MLD++EVEYYGSPVSLKSIAQISTPDASSLL+QPYDKSSLKA
Sbjct: 98 ENVRTNFSSIRTGRANPSMLDKIEVEYYGSPVSLKSIAQISTPDASSLLIQPYDKSSLKA 157
Query: 568 IEKAIVSADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIK 389
IEKAIV+++LG+TPNNDG++IRL++PQLTS+RRKEL+K VSKQ EEGKVALRNIRRDA+K
Sbjct: 158 IEKAIVASNLGMTPNNDGDLIRLNIPQLTSDRRKELTKIVSKQVEEGKVALRNIRRDALK 217
Query: 388 TYXXXXXXXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
Y EDNVKDLSSDLQKLTD+Y+KK+DAI KQKEKELL V
Sbjct: 218 AYEKLEKEKKLSEDNVKDLSSDLQKLTDDYIKKVDAIYKQKEKELLTV 265
>sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=Nuclear located protein D2; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor
Length = 227
Score = 292 bits (748), Expect = 2e-76
Identities = 152/230 (66%), Positives = 185/230 (80%)
Frame = -3
Query: 934 WSSAANYVRIQEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEK 755
W++AANYV+I+ G KF+ K +V Q KRTG +CAT K VK+RMEK
Sbjct: 1 WTAAANYVKIKVGTGKFARKTVVLSQ---KRTGTLKCATMEEIEAEKSLIEKSVKERMEK 57
Query: 754 TIESVRENFNAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSL 575
TIE+V+ +FN++RT R+NP MLD+++VEYYG+P SLKSIAQISTPD+SSLLV PYDKSSL
Sbjct: 58 TIENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSL 117
Query: 574 KAIEKAIVSADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDA 395
K IEKAIV++DLG+TPNNDG+VIRLS+PQLT++RRKELSK V+KQAEEGKVALRNIRRDA
Sbjct: 118 KDIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALRNIRRDA 177
Query: 394 IKTYXXXXXXXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
IK+Y EDNVKDLSSDLQK+ DEY+KK+D+I KQKEKEL+ V
Sbjct: 178 IKSYDKLEKEKKLSEDNVKDLSSDLQKVIDEYIKKVDSIFKQKEKELMTV 227
>ref|NP_001241288.1| uncharacterized protein LOC100794560 [Glycine max]
gi|255638439|gb|ACU19529.1| unknown [Glycine max]
Length = 261
Score = 291 bits (744), Expect = 6e-76
Identities = 169/281 (60%), Positives = 200/281 (71%), Gaps = 1/281 (0%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVRI 905
MA FS +SV S+ NPPK L LS S++S+A+Y +
Sbjct: 1 MATSFSPTASVGSII--FQNPPKGLLL--------------LSQQQQQRSFASSASYATL 44
Query: 904 Q-EGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENF 728
+ S +P+++K RT L R AT KD K RM++TI++VR NF
Sbjct: 45 KLPRAFALSPRPLLSKG----RTTLVRAATIEEIEAEKAAIEKDAKTRMDRTIDNVRTNF 100
Query: 727 NAVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVS 548
+++RTGRANP+MLD+++VEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVS
Sbjct: 101 SSIRTGRANPSMLDKIQVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVS 160
Query: 547 ADLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXX 368
+DLG+TPNNDGE+IRLS+PQLTS+RRKELSK V+KQAEEGKVALRNIRRDA+K Y
Sbjct: 161 SDLGMTPNNDGELIRLSIPQLTSDRRKELSKIVAKQAEEGKVALRNIRRDALKAYDKLEK 220
Query: 367 XXXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKDLSSDLQKLTDEYMKK+D I KQKEKELL V
Sbjct: 221 EKKLSEDNVKDLSSDLQKLTDEYMKKVDTIFKQKEKELLTV 261
>gb|AFK38022.1| unknown [Medicago truncatula]
Length = 262
Score = 282 bits (721), Expect = 3e-73
Identities = 158/280 (56%), Positives = 197/280 (70%)
Frame = -3
Query: 1084 MAIPFSSASSVRSLYQPILNPPKSPLSVRDSHYRGTDCMKHLSPFMNMSSWSSAANYVRI 905
MA FSS + +RS++Q + PK+ LS S +K S ++ + S + +
Sbjct: 1 MATSFSSTTPLRSIFQNLPVVPKALLSAHSSF-----TIKRSSTYVTLKLSGSGRHSL-- 53
Query: 904 QEGISKFSSKPIVAKQFVQKRTGLWRCATXXXXXXXXXXXXKDVKKRMEKTIESVRENFN 725
SK ++ + R G R AT DVK RME+T+++V+ NF+
Sbjct: 54 --------SKGLLT---LHTRKGFVRAATIEEIEAEKASIENDVKSRMERTLDNVKTNFS 102
Query: 724 AVRTGRANPAMLDRVEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSA 545
++RTGRA P+MLD++EVEYYGSPVSLK+IAQISTPDASSLLV PYDKSSLKAIEKAIV++
Sbjct: 103 SIRTGRATPSMLDKIEVEYYGSPVSLKTIAQISTPDASSLLVSPYDKSSLKAIEKAIVNS 162
Query: 544 DLGLTPNNDGEVIRLSVPQLTSERRKELSKAVSKQAEEGKVALRNIRRDAIKTYXXXXXX 365
D+G+TPNNDGEVIRLS+PQLTS+RRKEL+K VSKQ EEGKVALRNIRRDA+K Y
Sbjct: 163 DVGMTPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEGKVALRNIRRDALKAYEKLEKD 222
Query: 364 XXXXEDNVKDLSSDLQKLTDEYMKKIDAINKQKEKELLKV 245
EDNVKDLSSDLQKLTD+Y+KK+DA+ KQKEKELL V
Sbjct: 223 KKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKELLTV 262