BLASTX nr result

ID: Akebia24_contig00005557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00005557
         (5007 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, pa...  1489   0.0  
ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis s...  1417   0.0  
ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea] ...  1416   0.0  
ref|YP_004564095.1| RNA polymerase beta subunit [Nelumbo nucifer...  1415   0.0  
ref|YP_001004178.1| RNA polymerase beta subunit [Ranunculus macr...  1411   0.0  
ref|YP_740642.1| RNA polymerase beta subunit [Nandina domestica]...  1405   0.0  
sp|Q0G9M7.2|RPOB_LIRTU RecName: Full=DNA-directed RNA polymerase...  1405   0.0  
ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulip...  1405   0.0  
gb|ADD31192.1| RNA polymerase beta subunit protein [Meliosma aff...  1403   0.0  
ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [M...  1402   0.0  
ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [M...  1402   0.0  
gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast)...  1402   0.0  
gb|ADD31203.1| RNA polymerase beta subunit protein [Gunnera mani...  1402   0.0  
gb|AHE41621.1| RNA polymerase beta subunit protein (chloroplast)...  1401   0.0  
ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [M...  1400   0.0  
gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnol...  1400   0.0  
ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [M...  1400   0.0  
ref|YP_567068.1| RNA polymerase beta subunit [Vitis vinifera] gi...  1400   0.0  
ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [M...  1399   0.0  
ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [M...  1399   0.0  

>ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, partial [Medicago
            truncatula] gi|355506662|gb|AES87804.1| DNA-directed RNA
            polymerase subunit beta, partial [Medicago truncatula]
          Length = 2049

 Score = 1489 bits (3855), Expect = 0.0
 Identities = 763/964 (79%), Positives = 806/964 (83%), Gaps = 30/964 (3%)
 Frame = -1

Query: 2802 QNFSSMIDRYKHQQLRIGLVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGL 2623
            ++F      YKHQ LRIG VSP+QISAWA KILPNGEIVGEVTKPYT HYKTNKPEKDGL
Sbjct: 442  KDFQIQRKEYKHQHLRIGSVSPEQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKDGL 501

Query: 2622 FCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLTCPVTH 2443
            FCERIFGPIKSGICACGNYRVIGD+K+ PKFCEQCGVEFVDSR+RRYQMGYIKL CPVTH
Sbjct: 502  FCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRVRRYQMGYIKLACPVTH 561

Query: 2442 VWYLKRLPSYIANLLDKPLKELEGLVYCD------------------------FAFARPI 2335
            VWYLKRLPSYI +LLDKPLKELEGLVYCD                        F+FARP+
Sbjct: 562  VWYLKRLPSYITSLLDKPLKELEGLVYCDVRMRGNPHVRFSKGEIHLIGSYPNFSFARPV 621

Query: 2334 AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQLADLDLRLI 2155
             KKPTFLRLRG FEYEIQSWKYSIPLFF TQGFDTFRNREIS+GAGAIREQL DLDLR+I
Sbjct: 622  VKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIREQLVDLDLRII 681

Query: 2154 TDYSLVEWKELGEEGTAGNE----WEDRKIGRRKDFLVRRMELAKHFIRTNVEPEWMVXX 1987
             D SLVEWKELGEEG+A NE    WEDRK+GRRK+FLVRRMEL KHFIRTN+EPEWMV  
Sbjct: 682  MDSSLVEWKELGEEGSADNENENEWEDRKVGRRKNFLVRRMELVKHFIRTNIEPEWMVLS 741

Query: 1986 XXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELVMCQEKL 1807
                      PIIQIDGGKLMSSDINELYRRVIY              TPGELVMCQEKL
Sbjct: 742  LLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKL 801

Query: 1806 VQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVG 1627
            VQEAVDTLLDNGIRGQPMRDGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVIVVG
Sbjct: 802  VQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVIVVG 861

Query: 1626 PSLSLHRCGLPREIAIELFQTFVIRGLIRQHIASNIGVAKSKIREKEPIVWEILQEVMQG 1447
            PSLSLHRCGLPREIAIELFQTF+IRGLIR+H ASNIGVAKSKIREKEPIVWEILQEVM+G
Sbjct: 862  PSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWEILQEVMRG 921

Query: 1446 HPVLLNRAPTLHRLGIQAFQPILVEGRAIYLHPLVCKGFNADFDGDQMAVHVPLSLEAQA 1267
            HPVLLNRAPTLHRLGIQAFQPILVEGRAI LHPLVCKGFNADFDGDQMAVHVPLSLEAQA
Sbjct: 922  HPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQA 981

Query: 1266 EARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTIGNRRGICANRYNPCNHRNYQNEK 1087
            EARLLMFSH NLLSPAIGDPISVPTQDML+GLYVLT GNRRGICANRYNP N RN +NEK
Sbjct: 982  EARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPFNCRNSKNEK 1041

Query: 1086 IDDNNYNRYTK--EPYFCSSYDALGAYRQKRINXXXXXXXXXXXDQRVIASREVPIEVQY 913
            I +NN ++Y K  EP+FC+SYDA+GAYRQKRIN           DQ +++SREVPIEV Y
Sbjct: 1042 ISNNN-SKYMKKKEPFFCNSYDAIGAYRQKRINLDSPFWLRWRIDQCIMSSREVPIEVHY 1100

Query: 912  ESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGFCRACSYST*AK* 733
            ES GTY+EIYGHYL++R+IKKEI CIYIRTTVGHISFYREIEEAIQGF R   +S     
Sbjct: 1101 ESFGTYYEIYGHYLVIRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRKRKFS----- 1155

Query: 732  LYDTDTCGNSGLSSSTRIIIPEFLRESRSRKGSLRITDSNLLSNPTQRNMEVFMAERGDL 553
                        + S + I+                       NPT+ NMEV MAER +L
Sbjct: 1156 ------------NHSLKFIVEP---------------------NPTEWNMEVLMAERANL 1182

Query: 552  VFHNKAIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPS 373
            VFHN  I GTA+KRLISRLIDHFGMAYTSHILDQVKTLGF+QATATSISLGIDDLLTIPS
Sbjct: 1183 VFHNNVIGGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFRQATATSISLGIDDLLTIPS 1242

Query: 372  KGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPSNP 193
            KGWLVQDAEQQS ILEKH+HYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDP NP
Sbjct: 1243 KGWLVQDAEQQSSILEKHNHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNP 1302

Query: 192  VHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLMEYIISCYGARK 13
            VHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSL EYIISCYGARK
Sbjct: 1303 VHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARK 1362

Query: 12   GVVD 1
            GVVD
Sbjct: 1363 GVVD 1366



 Score =  831 bits (2146), Expect = 0.0
 Identities = 413/458 (90%), Positives = 433/458 (94%)
 Frame = -2

Query: 4169 MHQKPQVPRGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVY 3990
            MHQK +V +GKC+KKGQILADGAATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVY
Sbjct: 1    MHQKSRVHKGKCVKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVY 60

Query: 3989 GDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILV 3810
             DIYTSFHIRKYEIQTHVTS GPERITN+IPHLEAHLLRNLD+NGIV+LGSWVETGDILV
Sbjct: 61   EDIYTSFHIRKYEIQTHVTSHGPERITNKIPHLEAHLLRNLDKNGIVILGSWVETGDILV 120

Query: 3809 GKLTPQMAKESSYAPEDRLLRAILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSY 3630
            GKLTPQMAKESSYAPEDRLLRAILGIQVST+KETCLKLPIGG+GRVIDVRWIQKK GSSY
Sbjct: 121  GKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKAGSSY 180

Query: 3629 NPETIRVYILQKREIKVGDKVAGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPS 3450
            NPETI +YI QKREIKVGDKVAGRHGNKGIVSKIL  QDMPYLQDG PVDMVFNPLGVPS
Sbjct: 181  NPETIHIYISQKREIKVGDKVAGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPS 240

Query: 3449 RMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEP 3270
            RMNVG I ECSLGLAG +L+RHYRIAPFDERYEQEASRKLVFSELYEASKQT+NPW+FEP
Sbjct: 241  RMNVGHILECSLGLAGSMLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEP 300

Query: 3269 ESPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAK 3090
            E PGKS IFDGRTG+ FEQPVIIGK YILKLIHQVDDKIHGRSSGHYALVTQQPL+GRAK
Sbjct: 301  EYPGKSGIFDGRTGNLFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKGRAK 360

Query: 3089 QGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESF 2910
            QGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHI+ARQEVLGTTIIGGTIP P DAPESF
Sbjct: 361  QGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTIPKPVDAPESF 420

Query: 2909 RLLVRELRSLALELNHFLVSEKNFQINRKEA*SE*IRI 2796
            RLLVREL+SLALELNHFLVSEK+FQI RKE   + +RI
Sbjct: 421  RLLVRELQSLALELNHFLVSEKDFQIQRKEYKHQHLRI 458


>ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis saniculifolia]
            gi|226933874|gb|ACO92007.1| RNA polymerase beta subunit
            [Megaleranthis saniculifolia]
          Length = 1071

 Score = 1417 bits (3668), Expect = 0.0
 Identities = 703/730 (96%), Positives = 719/730 (98%), Gaps = 1/730 (0%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL
Sbjct: 342  GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 401

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPF+EIS++S
Sbjct: 402  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFYEISDKS 461

Query: 4643 -KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFP 4467
             KE+RVV+LSP RDEYYMVAAGNSLALNQG+QEEQVVPARYRQEFLTIAWEQIHLRSIFP
Sbjct: 462  TKELRVVYLSPSRDEYYMVAAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQIHLRSIFP 521

Query: 4466 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTI 4287
            FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGVS I
Sbjct: 522  FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAI 581

Query: 4286 AEREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILAD 4107
            AE EGKI+YTDTDKI+LSGNGDT+SIPLVMYQRSNKNTCMHQK +VPRGKCIKKGQILAD
Sbjct: 582  AEHEGKIVYTDTDKIMLSGNGDTLSIPLVMYQRSNKNTCMHQKTRVPRGKCIKKGQILAD 641

Query: 4106 GAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 3927
            GAATVGGELALGKNV+VAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEI+THVTSQ
Sbjct: 642  GAATVGGELALGKNVVVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIKTHVTSQ 701

Query: 3926 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 3747
            GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR
Sbjct: 702  GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 761

Query: 3746 AILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKV 3567
            AILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKV
Sbjct: 762  AILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKV 821

Query: 3566 AGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 3387
            AGRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR
Sbjct: 822  AGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 881

Query: 3386 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPV 3207
            HYRI+PFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPV
Sbjct: 882  HYRISPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV 941

Query: 3206 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 3027
            IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH
Sbjct: 942  IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 1001

Query: 3026 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 2847
            ILQEMLTYKSDHIRARQEVLGTTIIGGTI NPEDAPESFRLLVRELRSLALELNHFLVSE
Sbjct: 1002 ILQEMLTYKSDHIRARQEVLGTTIIGGTISNPEDAPESFRLLVRELRSLALELNHFLVSE 1061

Query: 2846 KNFQINRKEA 2817
            KNFQINRKEA
Sbjct: 1062 KNFQINRKEA 1071


>ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea]
            gi|224474126|gb|ACN49315.1| RNA polymerase beta subunit
            [Nelumbo lutea] gi|383286884|gb|AFH01533.1| RNA
            polymerase beta subunit (chloroplast) [Nelumbo lutea]
          Length = 1070

 Score = 1416 bits (3665), Expect = 0.0
 Identities = 703/730 (96%), Positives = 715/730 (97%)
 Frame = -2

Query: 5006 SGAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 4827
            SGAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG
Sbjct: 341  SGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 400

Query: 4826 LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISER 4647
            LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISER
Sbjct: 401  LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISER 460

Query: 4646 SKEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFP 4467
            SKEVR+V+LSP RDEYYMVAAGNSLALNQ +QEEQVVPARYRQEFLTIAWEQ+HLRSIFP
Sbjct: 461  SKEVRIVYLSPSRDEYYMVAAGNSLALNQSIQEEQVVPARYRQEFLTIAWEQVHLRSIFP 520

Query: 4466 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTI 4287
            FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS I
Sbjct: 521  FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAI 580

Query: 4286 AEREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILAD 4107
            AE EGKIIYTDTDKIILSGNGDT+SIPL+MYQRSNKNTCMHQKPQV RGKCIKKGQILAD
Sbjct: 581  AEHEGKIIYTDTDKIILSGNGDTLSIPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILAD 640

Query: 4106 GAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 3927
            GAATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ
Sbjct: 641  GAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 700

Query: 3926 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 3747
            GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR
Sbjct: 701  GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 760

Query: 3746 AILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKV 3567
            AILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREI+VGDKV
Sbjct: 761  AILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIRVGDKV 820

Query: 3566 AGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 3387
            AGRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR
Sbjct: 821  AGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 880

Query: 3386 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPV 3207
            HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPV
Sbjct: 881  HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV 940

Query: 3206 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 3027
            IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH
Sbjct: 941  IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 1000

Query: 3026 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 2847
            ILQEMLTYKSDHIRARQEVLGTTIIGGTI NPEDAPESFRLLVRELRSLALELNHFLVSE
Sbjct: 1001 ILQEMLTYKSDHIRARQEVLGTTIIGGTITNPEDAPESFRLLVRELRSLALELNHFLVSE 1060

Query: 2846 KNFQINRKEA 2817
            KNFQINRKEA
Sbjct: 1061 KNFQINRKEA 1070


>ref|YP_004564095.1| RNA polymerase beta subunit [Nelumbo nucifera]
            gi|224474214|gb|ACN49400.1| RNA polymerase beta subunit
            [Nelumbo nucifera] gi|290489618|gb|ADD31193.1| RNA
            polymerase beta subunit protein [Nelumbo nucifera]
            gi|383286789|gb|AFH01439.1| RNA polymerase beta subunit
            (chloroplast) [Nelumbo nucifera]
            gi|519666904|gb|AGO98516.1| RNA polymerase beta subunit
            (chloroplast) [Nelumbo nucifera]
          Length = 1070

 Score = 1415 bits (3663), Expect = 0.0
 Identities = 703/730 (96%), Positives = 715/730 (97%)
 Frame = -2

Query: 5006 SGAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 4827
            SGAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG
Sbjct: 341  SGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 400

Query: 4826 LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISER 4647
            LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISER
Sbjct: 401  LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISER 460

Query: 4646 SKEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFP 4467
            SKEVR+V+LSP RDEYYMVAAGNSLALNQ +QEEQVVPARYRQEFLTIAWEQ+HLRSIFP
Sbjct: 461  SKEVRIVYLSPSRDEYYMVAAGNSLALNQSIQEEQVVPARYRQEFLTIAWEQVHLRSIFP 520

Query: 4466 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTI 4287
            FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS I
Sbjct: 521  FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAI 580

Query: 4286 AEREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILAD 4107
            AE EGKIIYTDTDKIILSGNGDT+SIPL+MYQRSNKNTCMHQKPQV RGKCIKKGQILAD
Sbjct: 581  AEHEGKIIYTDTDKIILSGNGDTLSIPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILAD 640

Query: 4106 GAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 3927
            GAATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ
Sbjct: 641  GAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 700

Query: 3926 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 3747
            GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR
Sbjct: 701  GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 760

Query: 3746 AILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKV 3567
            AILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREI+VGDKV
Sbjct: 761  AILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIRVGDKV 820

Query: 3566 AGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 3387
            AGRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR
Sbjct: 821  AGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 880

Query: 3386 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPV 3207
            HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPV
Sbjct: 881  HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV 940

Query: 3206 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 3027
            IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH
Sbjct: 941  IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 1000

Query: 3026 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 2847
            ILQEMLTYKSDHIRARQEVLGTTIIGGTI NPEDAPESFRLLVRELRSLALELNHFLVSE
Sbjct: 1001 ILQEMLTYKSDHIRARQEVLGTTIIGGTIINPEDAPESFRLLVRELRSLALELNHFLVSE 1060

Query: 2846 KNFQINRKEA 2817
            KNFQINRKEA
Sbjct: 1061 KNFQINRKEA 1070


>ref|YP_001004178.1| RNA polymerase beta subunit [Ranunculus macranthus]
            gi|69216920|gb|AAZ03994.1| RNA polymerase beta chain
            [Ranunculus macranthus] gi|85540796|gb|ABC70748.1| RNA
            polymerase beta subunit [Ranunculus macranthus]
          Length = 1070

 Score = 1411 bits (3653), Expect = 0.0
 Identities = 697/729 (95%), Positives = 716/729 (98%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL
Sbjct: 342  GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 401

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPF+EISE+S
Sbjct: 402  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFYEISEKS 461

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEVRVV+LSP +DEYYMVAAGNSLALN+G+QEEQVVPARYRQEFLTI WEQIHLRSIFPF
Sbjct: 462  KEVRVVYLSPSKDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTITWEQIHLRSIFPF 521

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPL + EKCIVGTGLERQVALDSGVS IA
Sbjct: 522  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLCRSEKCIVGTGLERQVALDSGVSAIA 581

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKIIYTDTDKI+LSGNGDT+SIPLVMYQRSNKNTCMHQKP+VPR KCIKKGQILADG
Sbjct: 582  EHEGKIIYTDTDKIMLSGNGDTLSIPLVMYQRSNKNTCMHQKPRVPRSKCIKKGQILADG 641

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYNFEDAVLI+ERLVY DIYTSFHIRKYEIQTHVTSQG
Sbjct: 642  AATVGGELALGKNVLVAYMPWEGYNFEDAVLINERLVYRDIYTSFHIRKYEIQTHVTSQG 701

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQ+AKESSYAPEDRLLRA
Sbjct: 702  PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQIAKESSYAPEDRLLRA 761

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRV+DVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762  ILGIQVSTAKETCLKLPIGGRGRVVDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVA 821

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAG+LLDRH
Sbjct: 822  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGNLLDRH 881

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRI+PFDERYEQEASRKLVFSELY+ASKQT NPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882  YRISPFDERYEQEASRKLVFSELYQASKQTGNPWVFEPEYPGKSRIFDGRTGDPFEQPVI 941

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
            LQEMLTYKSDHIRARQEVLGTTI+GGTI NPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIMGGTISNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070


>ref|YP_740642.1| RNA polymerase beta subunit [Nandina domestica]
            gi|122165969|sp|Q09FW9.1|RPOB_NANDO RecName:
            Full=DNA-directed RNA polymerase subunit beta; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta; Short=RNA polymerase subunit beta
            gi|114054462|gb|ABI49855.1| RNA polymerase beta subunit
            [Nandina domestica]
          Length = 1070

 Score = 1405 bits (3637), Expect = 0.0
 Identities = 699/729 (95%), Positives = 709/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIR KLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 342  GAIRQKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 401

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPF+EISERS
Sbjct: 402  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFYEISERS 461

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            K VRV++LSP  DEYYMV AGNSLALN G+QEEQVVPARYRQEFLTIAWEQI LRSIFPF
Sbjct: 462  KGVRVIYLSPSIDEYYMVTAGNSLALNHGIQEEQVVPARYRQEFLTIAWEQIQLRSIFPF 521

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFS+GASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGVS IA
Sbjct: 522  QYFSVGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIA 581

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKIIYTDTDKIILSGNG T+SIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 582  EHEGKIIYTDTDKIILSGNGATLSIPLVMYQRSNKNTCMHQKPQVSRGKCIKKGQILADG 641

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642  AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQ+AKESSYAPEDRLLRA
Sbjct: 702  PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRA 761

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWI KKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIHKKGGSSYNPETIRVYISQKREIKVGDKVA 821

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRH
Sbjct: 822  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRH 881

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPF QPVI
Sbjct: 882  YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFAQPVI 941

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
            LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070


>sp|Q0G9M7.2|RPOB_LIRTU RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta; Short=RNA polymerase subunit beta
          Length = 1070

 Score = 1405 bits (3636), Expect = 0.0
 Identities = 697/729 (95%), Positives = 710/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 342  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 401

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 402  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 461

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEV++V+LSP RDEYYMVAAGNSLALN G+QEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 462  KEVQMVYLSPSRDEYYMVAAGNSLALNWGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 521

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 522  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 581

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+YTDTDKI+LSGNGDTISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 582  EHEGKIVYTDTDKIVLSGNGDTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 641

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 702  PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 761

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 762  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 821

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 822  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 881

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882  YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 941

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
             QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070


>ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulipifera]
            gi|113200986|gb|ABI32501.1| RNA polymerase beta subunit
            [Liriodendron tulipifera]
          Length = 1079

 Score = 1405 bits (3636), Expect = 0.0
 Identities = 697/729 (95%), Positives = 710/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEV++V+LSP RDEYYMVAAGNSLALN G+QEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471  KEVQMVYLSPSRDEYYMVAAGNSLALNWGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+YTDTDKI+LSGNGDTISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591  EHEGKIVYTDTDKIVLSGNGDTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711  PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891  YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
             QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079


>gb|ADD31192.1| RNA polymerase beta subunit protein [Meliosma aff. cuneifolia Moore
            333]
          Length = 1070

 Score = 1403 bits (3632), Expect = 0.0
 Identities = 695/729 (95%), Positives = 710/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHK IPTPHNLVTSTPLTTTYESFFGLHPLSQVLD+TNPLTQIVHGRKLSYLGPGGL
Sbjct: 342  GAIRHKWIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDQTNPLTQIVHGRKLSYLGPGGL 401

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISERS
Sbjct: 402  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERS 461

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            K+VR+V+LSP RDEYY+VAAGNSLALNQ VQEE+VVPARYRQEFLTIAWEQ+HLRSIFPF
Sbjct: 462  KKVRMVYLSPSRDEYYIVAAGNSLALNQNVQEEEVVPARYRQEFLTIAWEQVHLRSIFPF 521

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGVS IA
Sbjct: 522  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIA 581

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKIIYTD DKIILSGNGDT+ IPLVMYQRSNKNTCMHQKPQVPRGKC+KKGQILADG
Sbjct: 582  EHEGKIIYTDIDKIILSGNGDTLKIPLVMYQRSNKNTCMHQKPQVPRGKCMKKGQILADG 641

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVT+QG
Sbjct: 642  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTNQG 701

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLE HLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA
Sbjct: 702  PERITNEIPHLEVHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 761

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762  ILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVA 821

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 822  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 881

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGK  IFDGRTGDPFEQPVI
Sbjct: 882  YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKGIIFDGRTGDPFEQPVI 941

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
             QEMLTYKSDHIRARQEVLGTTIIGGTIPNP DAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPADAPESFRLLVRELRSLALELNHFLVSEK 1061

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070


>ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [Magnolia cathcartii]
          Length = 1079

 Score = 1402 bits (3629), Expect = 0.0
 Identities = 697/729 (95%), Positives = 710/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471  KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+ TDTDKI+LSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591  EHEGKIVSTDTDKIVLSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711  PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891  YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
            LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079


>ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [Magnolia salicifolia]
          Length = 1079

 Score = 1402 bits (3628), Expect = 0.0
 Identities = 697/729 (95%), Positives = 710/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351  GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471  KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+ TDTDKIILSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591  EHEGKIVSTDTDKIILSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711  PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891  YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
             QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070

Query: 2843 NFQINRKEA 2817
            NF+INRKEA
Sbjct: 1071 NFRINRKEA 1079


>gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast) [Hamamelis mollis]
          Length = 1070

 Score = 1402 bits (3628), Expect = 0.0
 Identities = 694/729 (95%), Positives = 710/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 342  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 401

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIH RIGHWGSLE PF+EISERS
Sbjct: 402  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHGRIGHWGSLESPFYEISERS 461

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            K+VR+++LSP RDEYYMVAAGNSLALNQG+QEEQ+VPARYRQEFLTIAWEQ+HLRSIFPF
Sbjct: 462  KKVRLLYLSPSRDEYYMVAAGNSLALNQGIQEEQIVPARYRQEFLTIAWEQVHLRSIFPF 521

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGV  +A
Sbjct: 522  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVPALA 581

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKIIYTDTDKIILSGNGDT+SIPLVMYQRSNKNTCMHQKPQV R KCIKKGQILADG
Sbjct: 582  EHEGKIIYTDTDKIILSGNGDTLSIPLVMYQRSNKNTCMHQKPQVQRSKCIKKGQILADG 641

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA
Sbjct: 702  PERITNEIPHLEAHLLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 761

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762  ILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVA 821

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRH
Sbjct: 822  GRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRH 881

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882  YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVI 941

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGK YILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942  IGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
            LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELN+FLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNYFLVSEK 1061

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070


>gb|ADD31203.1| RNA polymerase beta subunit protein [Gunnera manicata]
          Length = 1070

 Score = 1402 bits (3628), Expect = 0.0
 Identities = 695/729 (95%), Positives = 711/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL
Sbjct: 342  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 401

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISERS
Sbjct: 402  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERS 461

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            K+VR+++LSP RDEYYMVAAGNSLALNQG+QEEQVVPARYRQEFLTIAWEQ+HLRSIFPF
Sbjct: 462  KKVRMLYLSPSRDEYYMVAAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPF 521

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGVS IA
Sbjct: 522  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIA 581

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKIIYTDTDKIILSGNGDT+SIPLVMY+RSNKNTCMHQKPQV RG CIKKGQILADG
Sbjct: 582  EHEGKIIYTDTDKIILSGNGDTLSIPLVMYERSNKNTCMHQKPQVQRGNCIKKGQILADG 641

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGEL LGKN+LVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642  AATVGGELTLGKNLLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEA+LLRNLD+NGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA
Sbjct: 702  PERITNEIPHLEAYLLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 761

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVST+KETCLKLPIGG+GRVIDVRWIQKK GSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 762  ILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKRGSSYNPEMIRVYISQKREIKVGDKVA 821

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRH
Sbjct: 822  GRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRH 881

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882  YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVI 941

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
            LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070


>gb|AHE41621.1| RNA polymerase beta subunit protein (chloroplast) [Itea chinensis]
          Length = 1070

 Score = 1401 bits (3626), Expect = 0.0
 Identities = 693/730 (94%), Positives = 710/730 (97%)
 Frame = -2

Query: 5006 SGAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 4827
            SGAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG
Sbjct: 341  SGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 400

Query: 4826 LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISER 4647
            LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISER
Sbjct: 401  LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISER 460

Query: 4646 SKEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFP 4467
            SK+VR+++LSP RDEYYM+AAGNSL+LNQG+QEEQVVPARYRQEFLTIAWEQ+HLRSIFP
Sbjct: 461  SKKVRMLYLSPSRDEYYMIAAGNSLSLNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFP 520

Query: 4466 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTI 4287
            FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGV  I
Sbjct: 521  FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVPAI 580

Query: 4286 AEREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILAD 4107
            AE EGKIIYTDT KIILSGNGDT+S+PLVMYQRSNKNTCMHQKPQV RGKCIKKGQILAD
Sbjct: 581  AEHEGKIIYTDTAKIILSGNGDTLSVPLVMYQRSNKNTCMHQKPQVQRGKCIKKGQILAD 640

Query: 4106 GAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 3927
            GAA +GGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVT Q
Sbjct: 641  GAAIIGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTGQ 700

Query: 3926 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 3747
            GPERITNEIPHLEAHLLRNLD+NGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR
Sbjct: 701  GPERITNEIPHLEAHLLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 760

Query: 3746 AILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKV 3567
            AILGIQVST+KETCLKLPIGGKGRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKV
Sbjct: 761  AILGIQVSTSKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKV 820

Query: 3566 AGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 3387
            AGRHGNKGI+SKILP QDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDR
Sbjct: 821  AGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDR 880

Query: 3386 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPV 3207
            HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPV
Sbjct: 881  HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV 940

Query: 3206 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 3027
            IIGK YILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH
Sbjct: 941  IIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 1000

Query: 3026 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 2847
            ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE
Sbjct: 1001 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 1060

Query: 2846 KNFQINRKEA 2817
            K+FQINRKEA
Sbjct: 1061 KDFQINRKEA 1070


>ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [Magnolia sprengeri]
          Length = 1079

 Score = 1400 bits (3624), Expect = 0.0
 Identities = 697/729 (95%), Positives = 709/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471  KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+ TDTDKIILSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591  EHEGKIVSTDTDKIILSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711  PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891  YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
             QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079


>gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliiflora]
          Length = 1079

 Score = 1400 bits (3624), Expect = 0.0
 Identities = 697/729 (95%), Positives = 709/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471  KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+ TDTDKIILSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591  EHEGKIVSTDTDKIILSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711  PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891  YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
             QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079


>ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [Magnolia grandiflora]
            gi|372862835|gb|AEX98911.1| RNA polymerase beta subunit
            (chloroplast) [Magnolia grandiflora]
            gi|372863005|gb|AEX99079.1| RNA polymerase beta subunit
            (chloroplast) [Magnolia grandiflora]
          Length = 1079

 Score = 1400 bits (3623), Expect = 0.0
 Identities = 696/729 (95%), Positives = 709/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471  KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+ TDTDKI+LSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591  EHEGKIVSTDTDKIVLSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711  PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891  YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
             QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079


>ref|YP_567068.1| RNA polymerase beta subunit [Vitis vinifera]
            gi|595789587|ref|YP_009019783.1| RNA polymerase beta
            subunit (chloroplast) [Vitis rotundifolia]
            gi|122242805|sp|Q0ZJ28.1|RPOB_VITVI RecName:
            Full=DNA-directed RNA polymerase subunit beta; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta; Short=RNA polymerase subunit beta
            gi|91701642|gb|ABE47526.1| RNA polymerase beta subunit
            [Vitis vinifera] gi|550533640|dbj|BAO01484.1| RNA
            polymerase beta subunit (chloroplast) [Vitis vinifera
            subsp. caucasica] gi|550533726|dbj|BAO01568.1| RNA
            polymerase beta subunit (chloroplast) [Vitis vinifera
            subsp. caucasica] gi|550533811|dbj|BAO01652.1| RNA
            polymerase beta subunit (chloroplast) [Vitis vinifera
            subsp. caucasica] gi|586947404|gb|AHJ91201.1| RNA
            polymerase beta subunit (chloroplast) [Vitis
            rotundifolia]
          Length = 1070

 Score = 1400 bits (3623), Expect = 0.0
 Identities = 693/729 (95%), Positives = 711/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTP+TTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 342  GAIRHKLIPTPQNLVTSTPVTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 401

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISERS
Sbjct: 402  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERS 461

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            K+VR+++LSP RDEYYMVAAGNSLALNQG+QEEQVVPARYRQEFLTIAWEQ+HLRSIFPF
Sbjct: 462  KKVRMLYLSPSRDEYYMVAAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPF 521

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGV  IA
Sbjct: 522  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVPVIA 581

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+YTDTDKIILSGNGDT+SIPLVMYQRSNKNTCMHQK QV RGKCIKKGQILADG
Sbjct: 582  EHEGKIVYTDTDKIILSGNGDTLSIPLVMYQRSNKNTCMHQKAQVRRGKCIKKGQILADG 641

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITN+IPHLEAHLLRNLD+NGIV+LGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA
Sbjct: 702  PERITNKIPHLEAHLLRNLDKNGIVILGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 761

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762  ILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVA 821

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRH
Sbjct: 822  GRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRH 881

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDE+YEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882  YRIAPFDEKYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVI 941

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGK YILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942  IGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
            LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070


>ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis]
            gi|452848763|ref|YP_007474444.1| RNA polymerase beta
            subunit (chloroplast) [Magnolia officinalis subsp.
            biloba] gi|372862413|gb|AEX98494.1| RNA polymerase beta
            subunit (chloroplast) [Magnolia officinalis]
            gi|372862496|gb|AEX98576.1| RNA polymerase beta subunit
            (chloroplast) [Magnolia officinalis subsp. biloba]
            gi|372862581|gb|AEX98660.1| RNA polymerase beta subunit
            (chloroplast) [Magnolia officinalis subsp. biloba]
            gi|372862666|gb|AEX98744.1| RNA polymerase beta subunit
            (chloroplast) [Magnolia officinalis subsp. biloba]
          Length = 1079

 Score = 1399 bits (3622), Expect = 0.0
 Identities = 695/729 (95%), Positives = 709/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471  KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+ TDTDKI+LSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKC+KKGQILADG
Sbjct: 591  EHEGKIVSTDTDKIVLSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCVKKGQILADG 650

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711  PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891  YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
             QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079


>ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [Magnolia sinica]
          Length = 1079

 Score = 1399 bits (3621), Expect = 0.0
 Identities = 695/729 (95%), Positives = 709/729 (97%)
 Frame = -2

Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
            GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351  GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410

Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
            TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411  TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470

Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
            KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471  KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530

Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
            QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531  QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590

Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
            E EGKI+ TDTDKI+LSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591  EHEGKIVSTDTDKIVLSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650

Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
            AATVGGELALGKNVLVAYMPWEGYN EDAVLISER+VYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651  AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERIVYGDIYTSFHIRKYEIQTHVTSQG 710

Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
            PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711  PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770

Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
            ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771  ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830

Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
            GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831  GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890

Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
            YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891  YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950

Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
            IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951  IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010

Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
             QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070

Query: 2843 NFQINRKEA 2817
            NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079


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