BLASTX nr result
ID: Akebia24_contig00005557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00005557
(5007 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, pa... 1489 0.0
ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis s... 1417 0.0
ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea] ... 1416 0.0
ref|YP_004564095.1| RNA polymerase beta subunit [Nelumbo nucifer... 1415 0.0
ref|YP_001004178.1| RNA polymerase beta subunit [Ranunculus macr... 1411 0.0
ref|YP_740642.1| RNA polymerase beta subunit [Nandina domestica]... 1405 0.0
sp|Q0G9M7.2|RPOB_LIRTU RecName: Full=DNA-directed RNA polymerase... 1405 0.0
ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulip... 1405 0.0
gb|ADD31192.1| RNA polymerase beta subunit protein [Meliosma aff... 1403 0.0
ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [M... 1402 0.0
ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [M... 1402 0.0
gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast)... 1402 0.0
gb|ADD31203.1| RNA polymerase beta subunit protein [Gunnera mani... 1402 0.0
gb|AHE41621.1| RNA polymerase beta subunit protein (chloroplast)... 1401 0.0
ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [M... 1400 0.0
gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnol... 1400 0.0
ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [M... 1400 0.0
ref|YP_567068.1| RNA polymerase beta subunit [Vitis vinifera] gi... 1400 0.0
ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [M... 1399 0.0
ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [M... 1399 0.0
>ref|XP_003605607.1| DNA-directed RNA polymerase subunit beta, partial [Medicago
truncatula] gi|355506662|gb|AES87804.1| DNA-directed RNA
polymerase subunit beta, partial [Medicago truncatula]
Length = 2049
Score = 1489 bits (3855), Expect = 0.0
Identities = 763/964 (79%), Positives = 806/964 (83%), Gaps = 30/964 (3%)
Frame = -1
Query: 2802 QNFSSMIDRYKHQQLRIGLVSPQQISAWANKILPNGEIVGEVTKPYTFHYKTNKPEKDGL 2623
++F YKHQ LRIG VSP+QISAWA KILPNGEIVGEVTKPYT HYKTNKPEKDGL
Sbjct: 442 KDFQIQRKEYKHQHLRIGSVSPEQISAWAKKILPNGEIVGEVTKPYTLHYKTNKPEKDGL 501
Query: 2622 FCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLTCPVTH 2443
FCERIFGPIKSGICACGNYRVIGD+K+ PKFCEQCGVEFVDSR+RRYQMGYIKL CPVTH
Sbjct: 502 FCERIFGPIKSGICACGNYRVIGDKKDQPKFCEQCGVEFVDSRVRRYQMGYIKLACPVTH 561
Query: 2442 VWYLKRLPSYIANLLDKPLKELEGLVYCD------------------------FAFARPI 2335
VWYLKRLPSYI +LLDKPLKELEGLVYCD F+FARP+
Sbjct: 562 VWYLKRLPSYITSLLDKPLKELEGLVYCDVRMRGNPHVRFSKGEIHLIGSYPNFSFARPV 621
Query: 2334 AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQLADLDLRLI 2155
KKPTFLRLRG FEYEIQSWKYSIPLFF TQGFDTFRNREIS+GAGAIREQL DLDLR+I
Sbjct: 622 VKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIREQLVDLDLRII 681
Query: 2154 TDYSLVEWKELGEEGTAGNE----WEDRKIGRRKDFLVRRMELAKHFIRTNVEPEWMVXX 1987
D SLVEWKELGEEG+A NE WEDRK+GRRK+FLVRRMEL KHFIRTN+EPEWMV
Sbjct: 682 MDSSLVEWKELGEEGSADNENENEWEDRKVGRRKNFLVRRMELVKHFIRTNIEPEWMVLS 741
Query: 1986 XXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELVMCQEKL 1807
PIIQIDGGKLMSSDINELYRRVIY TPGELVMCQEKL
Sbjct: 742 LLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRSTPGELVMCQEKL 801
Query: 1806 VQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVG 1627
VQEAVDTLLDNGIRGQPMRDGHNKVYKSFSD+IEGKEGRFRETLLGKRVDYSGRSVIVVG
Sbjct: 802 VQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDIIEGKEGRFRETLLGKRVDYSGRSVIVVG 861
Query: 1626 PSLSLHRCGLPREIAIELFQTFVIRGLIRQHIASNIGVAKSKIREKEPIVWEILQEVMQG 1447
PSLSLHRCGLPREIAIELFQTF+IRGLIR+H ASNIGVAKSKIREKEPIVWEILQEVM+G
Sbjct: 862 PSLSLHRCGLPREIAIELFQTFLIRGLIRKHFASNIGVAKSKIREKEPIVWEILQEVMRG 921
Query: 1446 HPVLLNRAPTLHRLGIQAFQPILVEGRAIYLHPLVCKGFNADFDGDQMAVHVPLSLEAQA 1267
HPVLLNRAPTLHRLGIQAFQPILVEGRAI LHPLVCKGFNADFDGDQMAVHVPLSLEAQA
Sbjct: 922 HPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQA 981
Query: 1266 EARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTIGNRRGICANRYNPCNHRNYQNEK 1087
EARLLMFSH NLLSPAIGDPISVPTQDML+GLYVLT GNRRGICANRYNP N RN +NEK
Sbjct: 982 EARLLMFSHTNLLSPAIGDPISVPTQDMLIGLYVLTSGNRRGICANRYNPFNCRNSKNEK 1041
Query: 1086 IDDNNYNRYTK--EPYFCSSYDALGAYRQKRINXXXXXXXXXXXDQRVIASREVPIEVQY 913
I +NN ++Y K EP+FC+SYDA+GAYRQKRIN DQ +++SREVPIEV Y
Sbjct: 1042 ISNNN-SKYMKKKEPFFCNSYDAIGAYRQKRINLDSPFWLRWRIDQCIMSSREVPIEVHY 1100
Query: 912 ESLGTYHEIYGHYLIVRNIKKEILCIYIRTTVGHISFYREIEEAIQGFCRACSYST*AK* 733
ES GTY+EIYGHYL++R+IKKEI CIYIRTTVGHISFYREIEEAIQGF R +S
Sbjct: 1101 ESFGTYYEIYGHYLVIRSIKKEIRCIYIRTTVGHISFYREIEEAIQGFSRKRKFS----- 1155
Query: 732 LYDTDTCGNSGLSSSTRIIIPEFLRESRSRKGSLRITDSNLLSNPTQRNMEVFMAERGDL 553
+ S + I+ NPT+ NMEV MAER +L
Sbjct: 1156 ------------NHSLKFIVEP---------------------NPTEWNMEVLMAERANL 1182
Query: 552 VFHNKAIDGTAMKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPS 373
VFHN I GTA+KRLISRLIDHFGMAYTSHILDQVKTLGF+QATATSISLGIDDLLTIPS
Sbjct: 1183 VFHNNVIGGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFRQATATSISLGIDDLLTIPS 1242
Query: 372 KGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPSNP 193
KGWLVQDAEQQS ILEKH+HYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDP NP
Sbjct: 1243 KGWLVQDAEQQSSILEKHNHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNP 1302
Query: 192 VHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLMEYIISCYGARK 13
VHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSL EYIISCYGARK
Sbjct: 1303 VHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARK 1362
Query: 12 GVVD 1
GVVD
Sbjct: 1363 GVVD 1366
Score = 831 bits (2146), Expect = 0.0
Identities = 413/458 (90%), Positives = 433/458 (94%)
Frame = -2
Query: 4169 MHQKPQVPRGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVY 3990
MHQK +V +GKC+KKGQILADGAATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVY
Sbjct: 1 MHQKSRVHKGKCVKKGQILADGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVY 60
Query: 3989 GDIYTSFHIRKYEIQTHVTSQGPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILV 3810
DIYTSFHIRKYEIQTHVTS GPERITN+IPHLEAHLLRNLD+NGIV+LGSWVETGDILV
Sbjct: 61 EDIYTSFHIRKYEIQTHVTSHGPERITNKIPHLEAHLLRNLDKNGIVILGSWVETGDILV 120
Query: 3809 GKLTPQMAKESSYAPEDRLLRAILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSY 3630
GKLTPQMAKESSYAPEDRLLRAILGIQVST+KETCLKLPIGG+GRVIDVRWIQKK GSSY
Sbjct: 121 GKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKAGSSY 180
Query: 3629 NPETIRVYILQKREIKVGDKVAGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPS 3450
NPETI +YI QKREIKVGDKVAGRHGNKGIVSKIL QDMPYLQDG PVDMVFNPLGVPS
Sbjct: 181 NPETIHIYISQKREIKVGDKVAGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPS 240
Query: 3449 RMNVGQIFECSLGLAGDLLDRHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEP 3270
RMNVG I ECSLGLAG +L+RHYRIAPFDERYEQEASRKLVFSELYEASKQT+NPW+FEP
Sbjct: 241 RMNVGHILECSLGLAGSMLNRHYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEP 300
Query: 3269 ESPGKSRIFDGRTGDPFEQPVIIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAK 3090
E PGKS IFDGRTG+ FEQPVIIGK YILKLIHQVDDKIHGRSSGHYALVTQQPL+GRAK
Sbjct: 301 EYPGKSGIFDGRTGNLFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLKGRAK 360
Query: 3089 QGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESF 2910
QGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHI+ARQEVLGTTIIGGTIP P DAPESF
Sbjct: 361 QGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKARQEVLGTTIIGGTIPKPVDAPESF 420
Query: 2909 RLLVRELRSLALELNHFLVSEKNFQINRKEA*SE*IRI 2796
RLLVREL+SLALELNHFLVSEK+FQI RKE + +RI
Sbjct: 421 RLLVRELQSLALELNHFLVSEKDFQIQRKEYKHQHLRI 458
>ref|YP_002836082.1| RNA polymerase beta subunit [Megaleranthis saniculifolia]
gi|226933874|gb|ACO92007.1| RNA polymerase beta subunit
[Megaleranthis saniculifolia]
Length = 1071
Score = 1417 bits (3668), Expect = 0.0
Identities = 703/730 (96%), Positives = 719/730 (98%), Gaps = 1/730 (0%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL
Sbjct: 342 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 401
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPF+EIS++S
Sbjct: 402 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFYEISDKS 461
Query: 4643 -KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFP 4467
KE+RVV+LSP RDEYYMVAAGNSLALNQG+QEEQVVPARYRQEFLTIAWEQIHLRSIFP
Sbjct: 462 TKELRVVYLSPSRDEYYMVAAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQIHLRSIFP 521
Query: 4466 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTI 4287
FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGVS I
Sbjct: 522 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAI 581
Query: 4286 AEREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILAD 4107
AE EGKI+YTDTDKI+LSGNGDT+SIPLVMYQRSNKNTCMHQK +VPRGKCIKKGQILAD
Sbjct: 582 AEHEGKIVYTDTDKIMLSGNGDTLSIPLVMYQRSNKNTCMHQKTRVPRGKCIKKGQILAD 641
Query: 4106 GAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 3927
GAATVGGELALGKNV+VAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEI+THVTSQ
Sbjct: 642 GAATVGGELALGKNVVVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIKTHVTSQ 701
Query: 3926 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 3747
GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR
Sbjct: 702 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 761
Query: 3746 AILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKV 3567
AILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKV
Sbjct: 762 AILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKV 821
Query: 3566 AGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 3387
AGRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR
Sbjct: 822 AGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 881
Query: 3386 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPV 3207
HYRI+PFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPV
Sbjct: 882 HYRISPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV 941
Query: 3206 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 3027
IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH
Sbjct: 942 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 1001
Query: 3026 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 2847
ILQEMLTYKSDHIRARQEVLGTTIIGGTI NPEDAPESFRLLVRELRSLALELNHFLVSE
Sbjct: 1002 ILQEMLTYKSDHIRARQEVLGTTIIGGTISNPEDAPESFRLLVRELRSLALELNHFLVSE 1061
Query: 2846 KNFQINRKEA 2817
KNFQINRKEA
Sbjct: 1062 KNFQINRKEA 1071
>ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea]
gi|224474126|gb|ACN49315.1| RNA polymerase beta subunit
[Nelumbo lutea] gi|383286884|gb|AFH01533.1| RNA
polymerase beta subunit (chloroplast) [Nelumbo lutea]
Length = 1070
Score = 1416 bits (3665), Expect = 0.0
Identities = 703/730 (96%), Positives = 715/730 (97%)
Frame = -2
Query: 5006 SGAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 4827
SGAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG
Sbjct: 341 SGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 400
Query: 4826 LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISER 4647
LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISER
Sbjct: 401 LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISER 460
Query: 4646 SKEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFP 4467
SKEVR+V+LSP RDEYYMVAAGNSLALNQ +QEEQVVPARYRQEFLTIAWEQ+HLRSIFP
Sbjct: 461 SKEVRIVYLSPSRDEYYMVAAGNSLALNQSIQEEQVVPARYRQEFLTIAWEQVHLRSIFP 520
Query: 4466 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTI 4287
FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS I
Sbjct: 521 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAI 580
Query: 4286 AEREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILAD 4107
AE EGKIIYTDTDKIILSGNGDT+SIPL+MYQRSNKNTCMHQKPQV RGKCIKKGQILAD
Sbjct: 581 AEHEGKIIYTDTDKIILSGNGDTLSIPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILAD 640
Query: 4106 GAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 3927
GAATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ
Sbjct: 641 GAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 700
Query: 3926 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 3747
GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR
Sbjct: 701 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 760
Query: 3746 AILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKV 3567
AILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREI+VGDKV
Sbjct: 761 AILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIRVGDKV 820
Query: 3566 AGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 3387
AGRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR
Sbjct: 821 AGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 880
Query: 3386 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPV 3207
HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPV
Sbjct: 881 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV 940
Query: 3206 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 3027
IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH
Sbjct: 941 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 1000
Query: 3026 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 2847
ILQEMLTYKSDHIRARQEVLGTTIIGGTI NPEDAPESFRLLVRELRSLALELNHFLVSE
Sbjct: 1001 ILQEMLTYKSDHIRARQEVLGTTIIGGTITNPEDAPESFRLLVRELRSLALELNHFLVSE 1060
Query: 2846 KNFQINRKEA 2817
KNFQINRKEA
Sbjct: 1061 KNFQINRKEA 1070
>ref|YP_004564095.1| RNA polymerase beta subunit [Nelumbo nucifera]
gi|224474214|gb|ACN49400.1| RNA polymerase beta subunit
[Nelumbo nucifera] gi|290489618|gb|ADD31193.1| RNA
polymerase beta subunit protein [Nelumbo nucifera]
gi|383286789|gb|AFH01439.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|519666904|gb|AGO98516.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
Length = 1070
Score = 1415 bits (3663), Expect = 0.0
Identities = 703/730 (96%), Positives = 715/730 (97%)
Frame = -2
Query: 5006 SGAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 4827
SGAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG
Sbjct: 341 SGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 400
Query: 4826 LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISER 4647
LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISER
Sbjct: 401 LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISER 460
Query: 4646 SKEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFP 4467
SKEVR+V+LSP RDEYYMVAAGNSLALNQ +QEEQVVPARYRQEFLTIAWEQ+HLRSIFP
Sbjct: 461 SKEVRIVYLSPSRDEYYMVAAGNSLALNQSIQEEQVVPARYRQEFLTIAWEQVHLRSIFP 520
Query: 4466 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTI 4287
FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS I
Sbjct: 521 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAI 580
Query: 4286 AEREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILAD 4107
AE EGKIIYTDTDKIILSGNGDT+SIPL+MYQRSNKNTCMHQKPQV RGKCIKKGQILAD
Sbjct: 581 AEHEGKIIYTDTDKIILSGNGDTLSIPLIMYQRSNKNTCMHQKPQVRRGKCIKKGQILAD 640
Query: 4106 GAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 3927
GAATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ
Sbjct: 641 GAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 700
Query: 3926 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 3747
GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR
Sbjct: 701 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 760
Query: 3746 AILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKV 3567
AILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREI+VGDKV
Sbjct: 761 AILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIRVGDKV 820
Query: 3566 AGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 3387
AGRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR
Sbjct: 821 AGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 880
Query: 3386 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPV 3207
HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPV
Sbjct: 881 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV 940
Query: 3206 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 3027
IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH
Sbjct: 941 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 1000
Query: 3026 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 2847
ILQEMLTYKSDHIRARQEVLGTTIIGGTI NPEDAPESFRLLVRELRSLALELNHFLVSE
Sbjct: 1001 ILQEMLTYKSDHIRARQEVLGTTIIGGTIINPEDAPESFRLLVRELRSLALELNHFLVSE 1060
Query: 2846 KNFQINRKEA 2817
KNFQINRKEA
Sbjct: 1061 KNFQINRKEA 1070
>ref|YP_001004178.1| RNA polymerase beta subunit [Ranunculus macranthus]
gi|69216920|gb|AAZ03994.1| RNA polymerase beta chain
[Ranunculus macranthus] gi|85540796|gb|ABC70748.1| RNA
polymerase beta subunit [Ranunculus macranthus]
Length = 1070
Score = 1411 bits (3653), Expect = 0.0
Identities = 697/729 (95%), Positives = 716/729 (98%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL
Sbjct: 342 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 401
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPF+EISE+S
Sbjct: 402 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFYEISEKS 461
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEVRVV+LSP +DEYYMVAAGNSLALN+G+QEEQVVPARYRQEFLTI WEQIHLRSIFPF
Sbjct: 462 KEVRVVYLSPSKDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTITWEQIHLRSIFPF 521
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPL + EKCIVGTGLERQVALDSGVS IA
Sbjct: 522 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLCRSEKCIVGTGLERQVALDSGVSAIA 581
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKIIYTDTDKI+LSGNGDT+SIPLVMYQRSNKNTCMHQKP+VPR KCIKKGQILADG
Sbjct: 582 EHEGKIIYTDTDKIMLSGNGDTLSIPLVMYQRSNKNTCMHQKPRVPRSKCIKKGQILADG 641
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYNFEDAVLI+ERLVY DIYTSFHIRKYEIQTHVTSQG
Sbjct: 642 AATVGGELALGKNVLVAYMPWEGYNFEDAVLINERLVYRDIYTSFHIRKYEIQTHVTSQG 701
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQ+AKESSYAPEDRLLRA
Sbjct: 702 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQIAKESSYAPEDRLLRA 761
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRV+DVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762 ILGIQVSTAKETCLKLPIGGRGRVVDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVA 821
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAG+LLDRH
Sbjct: 822 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGNLLDRH 881
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRI+PFDERYEQEASRKLVFSELY+ASKQT NPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882 YRISPFDERYEQEASRKLVFSELYQASKQTGNPWVFEPEYPGKSRIFDGRTGDPFEQPVI 941
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
LQEMLTYKSDHIRARQEVLGTTI+GGTI NPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIMGGTISNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070
>ref|YP_740642.1| RNA polymerase beta subunit [Nandina domestica]
gi|122165969|sp|Q09FW9.1|RPOB_NANDO RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|114054462|gb|ABI49855.1| RNA polymerase beta subunit
[Nandina domestica]
Length = 1070
Score = 1405 bits (3637), Expect = 0.0
Identities = 699/729 (95%), Positives = 709/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIR KLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 342 GAIRQKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 401
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPF+EISERS
Sbjct: 402 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFYEISERS 461
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
K VRV++LSP DEYYMV AGNSLALN G+QEEQVVPARYRQEFLTIAWEQI LRSIFPF
Sbjct: 462 KGVRVIYLSPSIDEYYMVTAGNSLALNHGIQEEQVVPARYRQEFLTIAWEQIQLRSIFPF 521
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFS+GASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGVS IA
Sbjct: 522 QYFSVGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIA 581
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKIIYTDTDKIILSGNG T+SIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 582 EHEGKIIYTDTDKIILSGNGATLSIPLVMYQRSNKNTCMHQKPQVSRGKCIKKGQILADG 641
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQ+AKESSYAPEDRLLRA
Sbjct: 702 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQVAKESSYAPEDRLLRA 761
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWI KKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIHKKGGSSYNPETIRVYISQKREIKVGDKVA 821
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRH
Sbjct: 822 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRH 881
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPF QPVI
Sbjct: 882 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFAQPVI 941
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070
>sp|Q0G9M7.2|RPOB_LIRTU RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
Length = 1070
Score = 1405 bits (3636), Expect = 0.0
Identities = 697/729 (95%), Positives = 710/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 342 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 401
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 402 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 461
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEV++V+LSP RDEYYMVAAGNSLALN G+QEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 462 KEVQMVYLSPSRDEYYMVAAGNSLALNWGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 521
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 522 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 581
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+YTDTDKI+LSGNGDTISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 582 EHEGKIVYTDTDKIVLSGNGDTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 641
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 702 PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 761
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 762 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 821
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 822 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 881
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882 YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 941
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070
>ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulipifera]
gi|113200986|gb|ABI32501.1| RNA polymerase beta subunit
[Liriodendron tulipifera]
Length = 1079
Score = 1405 bits (3636), Expect = 0.0
Identities = 697/729 (95%), Positives = 710/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEV++V+LSP RDEYYMVAAGNSLALN G+QEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471 KEVQMVYLSPSRDEYYMVAAGNSLALNWGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+YTDTDKI+LSGNGDTISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591 EHEGKIVYTDTDKIVLSGNGDTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711 PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891 YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079
>gb|ADD31192.1| RNA polymerase beta subunit protein [Meliosma aff. cuneifolia Moore
333]
Length = 1070
Score = 1403 bits (3632), Expect = 0.0
Identities = 695/729 (95%), Positives = 710/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHK IPTPHNLVTSTPLTTTYESFFGLHPLSQVLD+TNPLTQIVHGRKLSYLGPGGL
Sbjct: 342 GAIRHKWIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDQTNPLTQIVHGRKLSYLGPGGL 401
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISERS
Sbjct: 402 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERS 461
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
K+VR+V+LSP RDEYY+VAAGNSLALNQ VQEE+VVPARYRQEFLTIAWEQ+HLRSIFPF
Sbjct: 462 KKVRMVYLSPSRDEYYIVAAGNSLALNQNVQEEEVVPARYRQEFLTIAWEQVHLRSIFPF 521
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGVS IA
Sbjct: 522 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIA 581
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKIIYTD DKIILSGNGDT+ IPLVMYQRSNKNTCMHQKPQVPRGKC+KKGQILADG
Sbjct: 582 EHEGKIIYTDIDKIILSGNGDTLKIPLVMYQRSNKNTCMHQKPQVPRGKCMKKGQILADG 641
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVT+QG
Sbjct: 642 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTNQG 701
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLE HLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA
Sbjct: 702 PERITNEIPHLEVHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 761
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762 ILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVA 821
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 822 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 881
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGK IFDGRTGDPFEQPVI
Sbjct: 882 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKGIIFDGRTGDPFEQPVI 941
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
QEMLTYKSDHIRARQEVLGTTIIGGTIPNP DAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPADAPESFRLLVRELRSLALELNHFLVSEK 1061
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070
>ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [Magnolia cathcartii]
Length = 1079
Score = 1402 bits (3629), Expect = 0.0
Identities = 697/729 (95%), Positives = 710/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471 KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+ TDTDKI+LSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591 EHEGKIVSTDTDKIVLSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711 PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891 YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079
>ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [Magnolia salicifolia]
Length = 1079
Score = 1402 bits (3628), Expect = 0.0
Identities = 697/729 (95%), Positives = 710/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471 KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+ TDTDKIILSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591 EHEGKIVSTDTDKIILSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711 PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891 YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070
Query: 2843 NFQINRKEA 2817
NF+INRKEA
Sbjct: 1071 NFRINRKEA 1079
>gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast) [Hamamelis mollis]
Length = 1070
Score = 1402 bits (3628), Expect = 0.0
Identities = 694/729 (95%), Positives = 710/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 342 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 401
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIH RIGHWGSLE PF+EISERS
Sbjct: 402 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHGRIGHWGSLESPFYEISERS 461
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
K+VR+++LSP RDEYYMVAAGNSLALNQG+QEEQ+VPARYRQEFLTIAWEQ+HLRSIFPF
Sbjct: 462 KKVRLLYLSPSRDEYYMVAAGNSLALNQGIQEEQIVPARYRQEFLTIAWEQVHLRSIFPF 521
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGV +A
Sbjct: 522 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVPALA 581
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKIIYTDTDKIILSGNGDT+SIPLVMYQRSNKNTCMHQKPQV R KCIKKGQILADG
Sbjct: 582 EHEGKIIYTDTDKIILSGNGDTLSIPLVMYQRSNKNTCMHQKPQVQRSKCIKKGQILADG 641
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA
Sbjct: 702 PERITNEIPHLEAHLLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 761
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762 ILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVA 821
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRH
Sbjct: 822 GRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRH 881
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVI 941
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGK YILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942 IGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELN+FLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNYFLVSEK 1061
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070
>gb|ADD31203.1| RNA polymerase beta subunit protein [Gunnera manicata]
Length = 1070
Score = 1402 bits (3628), Expect = 0.0
Identities = 695/729 (95%), Positives = 711/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL
Sbjct: 342 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 401
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISERS
Sbjct: 402 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERS 461
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
K+VR+++LSP RDEYYMVAAGNSLALNQG+QEEQVVPARYRQEFLTIAWEQ+HLRSIFPF
Sbjct: 462 KKVRMLYLSPSRDEYYMVAAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPF 521
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGVS IA
Sbjct: 522 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAIA 581
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKIIYTDTDKIILSGNGDT+SIPLVMY+RSNKNTCMHQKPQV RG CIKKGQILADG
Sbjct: 582 EHEGKIIYTDTDKIILSGNGDTLSIPLVMYERSNKNTCMHQKPQVQRGNCIKKGQILADG 641
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGEL LGKN+LVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642 AATVGGELTLGKNLLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEA+LLRNLD+NGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA
Sbjct: 702 PERITNEIPHLEAYLLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 761
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVST+KETCLKLPIGG+GRVIDVRWIQKK GSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 762 ILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKRGSSYNPEMIRVYISQKREIKVGDKVA 821
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRH
Sbjct: 822 GRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRH 881
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVI 941
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070
>gb|AHE41621.1| RNA polymerase beta subunit protein (chloroplast) [Itea chinensis]
Length = 1070
Score = 1401 bits (3626), Expect = 0.0
Identities = 693/730 (94%), Positives = 710/730 (97%)
Frame = -2
Query: 5006 SGAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 4827
SGAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG
Sbjct: 341 SGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGG 400
Query: 4826 LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISER 4647
LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISER
Sbjct: 401 LTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISER 460
Query: 4646 SKEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFP 4467
SK+VR+++LSP RDEYYM+AAGNSL+LNQG+QEEQVVPARYRQEFLTIAWEQ+HLRSIFP
Sbjct: 461 SKKVRMLYLSPSRDEYYMIAAGNSLSLNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFP 520
Query: 4466 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTI 4287
FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGV I
Sbjct: 521 FQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVPAI 580
Query: 4286 AEREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILAD 4107
AE EGKIIYTDT KIILSGNGDT+S+PLVMYQRSNKNTCMHQKPQV RGKCIKKGQILAD
Sbjct: 581 AEHEGKIIYTDTAKIILSGNGDTLSVPLVMYQRSNKNTCMHQKPQVQRGKCIKKGQILAD 640
Query: 4106 GAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQ 3927
GAA +GGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVT Q
Sbjct: 641 GAAIIGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTGQ 700
Query: 3926 GPERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 3747
GPERITNEIPHLEAHLLRNLD+NGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR
Sbjct: 701 GPERITNEIPHLEAHLLRNLDKNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLR 760
Query: 3746 AILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKV 3567
AILGIQVST+KETCLKLPIGGKGRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKV
Sbjct: 761 AILGIQVSTSKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKV 820
Query: 3566 AGRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDR 3387
AGRHGNKGI+SKILP QDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDR
Sbjct: 821 AGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDR 880
Query: 3386 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPV 3207
HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPV
Sbjct: 881 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPV 940
Query: 3206 IIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 3027
IIGK YILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH
Sbjct: 941 IIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAH 1000
Query: 3026 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 2847
ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE
Sbjct: 1001 ILQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSE 1060
Query: 2846 KNFQINRKEA 2817
K+FQINRKEA
Sbjct: 1061 KDFQINRKEA 1070
>ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [Magnolia sprengeri]
Length = 1079
Score = 1400 bits (3624), Expect = 0.0
Identities = 697/729 (95%), Positives = 709/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471 KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+ TDTDKIILSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591 EHEGKIVSTDTDKIILSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711 PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891 YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079
>gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliiflora]
Length = 1079
Score = 1400 bits (3624), Expect = 0.0
Identities = 697/729 (95%), Positives = 709/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471 KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+ TDTDKIILSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591 EHEGKIVSTDTDKIILSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711 PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891 YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079
>ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [Magnolia grandiflora]
gi|372862835|gb|AEX98911.1| RNA polymerase beta subunit
(chloroplast) [Magnolia grandiflora]
gi|372863005|gb|AEX99079.1| RNA polymerase beta subunit
(chloroplast) [Magnolia grandiflora]
Length = 1079
Score = 1400 bits (3623), Expect = 0.0
Identities = 696/729 (95%), Positives = 709/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471 KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+ TDTDKI+LSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591 EHEGKIVSTDTDKIVLSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711 PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891 YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079
>ref|YP_567068.1| RNA polymerase beta subunit [Vitis vinifera]
gi|595789587|ref|YP_009019783.1| RNA polymerase beta
subunit (chloroplast) [Vitis rotundifolia]
gi|122242805|sp|Q0ZJ28.1|RPOB_VITVI RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|91701642|gb|ABE47526.1| RNA polymerase beta subunit
[Vitis vinifera] gi|550533640|dbj|BAO01484.1| RNA
polymerase beta subunit (chloroplast) [Vitis vinifera
subsp. caucasica] gi|550533726|dbj|BAO01568.1| RNA
polymerase beta subunit (chloroplast) [Vitis vinifera
subsp. caucasica] gi|550533811|dbj|BAO01652.1| RNA
polymerase beta subunit (chloroplast) [Vitis vinifera
subsp. caucasica] gi|586947404|gb|AHJ91201.1| RNA
polymerase beta subunit (chloroplast) [Vitis
rotundifolia]
Length = 1070
Score = 1400 bits (3623), Expect = 0.0
Identities = 693/729 (95%), Positives = 711/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTP+TTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 342 GAIRHKLIPTPQNLVTSTPVTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 401
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLE PF+EISERS
Sbjct: 402 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLESPFYEISERS 461
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
K+VR+++LSP RDEYYMVAAGNSLALNQG+QEEQVVPARYRQEFLTIAWEQ+HLRSIFPF
Sbjct: 462 KKVRMLYLSPSRDEYYMVAAGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHLRSIFPF 521
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLERQ ALDSGV IA
Sbjct: 522 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVPVIA 581
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+YTDTDKIILSGNGDT+SIPLVMYQRSNKNTCMHQK QV RGKCIKKGQILADG
Sbjct: 582 EHEGKIVYTDTDKIILSGNGDTLSIPLVMYQRSNKNTCMHQKAQVRRGKCIKKGQILADG 641
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 642 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 701
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITN+IPHLEAHLLRNLD+NGIV+LGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA
Sbjct: 702 PERITNKIPHLEAHLLRNLDKNGIVILGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 761
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVST+KETCLKLPIGG+GRVIDVRWIQKKGGSSYNPETIRVYI QKREIKVGDKVA
Sbjct: 762 ILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREIKVGDKVA 821
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG LLDRH
Sbjct: 822 GRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDRH 881
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDE+YEQEASRKLVFSELYEASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 882 YRIAPFDEKYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVI 941
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGK YILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 942 IGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1001
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1002 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1061
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1062 NFQINRKEA 1070
>ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis]
gi|452848763|ref|YP_007474444.1| RNA polymerase beta
subunit (chloroplast) [Magnolia officinalis subsp.
biloba] gi|372862413|gb|AEX98494.1| RNA polymerase beta
subunit (chloroplast) [Magnolia officinalis]
gi|372862496|gb|AEX98576.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862581|gb|AEX98660.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862666|gb|AEX98744.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
Length = 1079
Score = 1399 bits (3622), Expect = 0.0
Identities = 695/729 (95%), Positives = 709/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471 KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+ TDTDKI+LSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKC+KKGQILADG
Sbjct: 591 EHEGKIVSTDTDKIVLSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCVKKGQILADG 650
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 710
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711 PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891 YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079
>ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [Magnolia sinica]
Length = 1079
Score = 1399 bits (3621), Expect = 0.0
Identities = 695/729 (95%), Positives = 709/729 (97%)
Frame = -2
Query: 5003 GAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGL 4824
GAIRHKLIPTP NLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRK SYLGPGGL
Sbjct: 351 GAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGL 410
Query: 4823 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSLERPFFEISERS 4644
TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGS+E PF+EISERS
Sbjct: 411 TGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISERS 470
Query: 4643 KEVRVVFLSPGRDEYYMVAAGNSLALNQGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 4464
KEV++V+LSP RDEYYMVAAGNSLALN GVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF
Sbjct: 471 KEVQMVYLSPSRDEYYMVAAGNSLALNWGVQEEQVVPARYRQEFLTIAWEQIHLRSIFPF 530
Query: 4463 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQPEKCIVGTGLERQVALDSGVSTIA 4284
QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLS+ EKCIVGTGLE Q ALDSGVS IA
Sbjct: 531 QYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLECQAALDSGVSAIA 590
Query: 4283 EREGKIIYTDTDKIILSGNGDTISIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADG 4104
E EGKI+ TDTDKI+LSGNG+TISIPLVMYQRSNKNTCMHQKPQV RGKCIKKGQILADG
Sbjct: 591 EHEGKIVSTDTDKIVLSGNGNTISIPLVMYQRSNKNTCMHQKPQVRRGKCIKKGQILADG 650
Query: 4103 AATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYGDIYTSFHIRKYEIQTHVTSQG 3924
AATVGGELALGKNVLVAYMPWEGYN EDAVLISER+VYGDIYTSFHIRKYEIQTHVTSQG
Sbjct: 651 AATVGGELALGKNVLVAYMPWEGYNSEDAVLISERIVYGDIYTSFHIRKYEIQTHVTSQG 710
Query: 3923 PERITNEIPHLEAHLLRNLDRNGIVMLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRA 3744
PERITNEIPHLEAHLLRNLD+NGIVMLGSW+ETGDILVGKLTPQ AKESSYAPEDRLLRA
Sbjct: 711 PERITNEIPHLEAHLLRNLDKNGIVMLGSWIETGDILVGKLTPQTAKESSYAPEDRLLRA 770
Query: 3743 ILGIQVSTAKETCLKLPIGGKGRVIDVRWIQKKGGSSYNPETIRVYILQKREIKVGDKVA 3564
ILGIQVSTAKETCLKLPIGG+GRVIDVRWIQKKGGSSYNPE IRVYI QKREIKVGDKVA
Sbjct: 771 ILGIQVSTAKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVA 830
Query: 3563 GRHGNKGIVSKILPIQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 3384
GRHGNKGI+SKILP QDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH
Sbjct: 831 GRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLDRH 890
Query: 3383 YRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPESPGKSRIFDGRTGDPFEQPVI 3204
YRIAPFDERYEQEASRKLVFSELY ASKQTANPWVFEPE PGKSRIFDGRTGDPFEQPVI
Sbjct: 891 YRIAPFDERYEQEASRKLVFSELYSASKQTANPWVFEPECPGKSRIFDGRTGDPFEQPVI 950
Query: 3203 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 3024
IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI
Sbjct: 951 IGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHI 1010
Query: 3023 LQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 2844
QEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK
Sbjct: 1011 SQEMLTYKSDHIRARQEVLGTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSEK 1070
Query: 2843 NFQINRKEA 2817
NFQINRKEA
Sbjct: 1071 NFQINRKEA 1079