BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00005466
         (855 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD ...   248   3e-63
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   233   5e-59
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   230   5e-58
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro...   224   2e-56
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g...   206   7e-51
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun...   203   6e-50
ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prun...   203   6e-50
ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,...   202   1e-49
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,...   199   1e-48
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t...   191   4e-46
ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,...   190   5e-46
gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]     186   7e-45
ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [...   185   2e-44
ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glyci...   184   5e-44
ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phas...   183   6e-44
ref|XP_007137569.1| hypothetical protein PHAVU_009G1376001g, par...   183   6e-44
ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citr...   182   2e-43
ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,...   181   3e-43
ref|XP_006394670.1| hypothetical protein EUTSA_v10004166mg [Eutr...   177   3e-42
dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]     177   3e-42

>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|302143685|emb|CBI22546.3| unnamed protein product
           [Vitis vinifera]
          Length = 518

 Score =  248 bits (632), Expect = 3e-63
 Identities = 137/249 (55%), Positives = 175/249 (70%), Gaps = 4/249 (1%)
 Frame = +2

Query: 119 MGVVTVPSSAS--QTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSD 292
           MGVVTV SSAS  +TP GL+A+FS H++PL+RP++LAF  DK KN AL+T HEPI LP +
Sbjct: 1   MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60

Query: 293 TPKEHKI-LRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSE 469
           T K+HK  LR+++K SKRVKAV              Y+EAAAKLENIYKLS  TD+S++E
Sbjct: 61  TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELD-YNEAAAKLENIYKLSPATDVSEAE 119

Query: 470 DTDRLMXXXXXTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVI 646
           D +R++      +K+V  +D++ EKE+  NVVR H KK KRL+L+             V 
Sbjct: 120 DLERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVA 179

Query: 647 SSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKAL 826
           S   K ++  E  +++ L+REYS STDLVSLDWKKMKIP VLP SEHAWLFKLMQPMK L
Sbjct: 180 SIQKKRDSKNEDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239

Query: 827 LQVKENLKK 853
           L+VK+NL+K
Sbjct: 240 LEVKDNLQK 248


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 516

 Score =  233 bits (595), Expect = 5e-59
 Identities = 135/247 (54%), Positives = 169/247 (68%), Gaps = 3/247 (1%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV SSAS++PLGLS+RFST   PLKRPVI++F  DKTKNT LI   E ISL  +T 
Sbjct: 1   MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60

Query: 299 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDT 475
           KE+ K  R+ +K S+RV AV              YSEAAAKLE+IYK S  T  S++E  
Sbjct: 61  KENEKRSRRVSKRSERVHAVAIEASPSTLELD--YSEAAAKLESIYKRSLETASSNTEVQ 118

Query: 476 DRLMXXXXXTKKKVEESDEQVEKEIFHNVVRSHKK-AKRLNLDXXXXXXXXXXXXMVISS 652
           D L+     T+K++ E DE+ +KE+  NVV++ +K +KRLNLD            MV SS
Sbjct: 119 DHLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASS 178

Query: 653 DGKE-NNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALL 829
           + ++   D E   +++L+REYSG+TDL SLDWKKMKIP VLPSSEH WLFKLMQPMKA+L
Sbjct: 179 ERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAIL 238

Query: 830 QVKENLK 850
           QVKENL+
Sbjct: 239 QVKENLQ 245


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform 1 [Solanum
           lycopersicum]
          Length = 516

 Score =  230 bits (587), Expect = 5e-58
 Identities = 132/247 (53%), Positives = 169/247 (68%), Gaps = 3/247 (1%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV SSAS++PLGLS+RFS    PLKRPVI++F  D TKNT L++  E IS P +T 
Sbjct: 1   MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 299 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDT 475
           KE+ K  R+ +K ++RV AV              YSEAAAKLE+IYK S  T   ++E  
Sbjct: 61  KENEKRSRRVSKRTERVHAVTIEAPPSTLELD--YSEAAAKLESIYKRSLETASPNTEVK 118

Query: 476 DRLMXXXXXTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVISS 652
           D L+     T+K++ ESDE+ +KE+  NVV++  KK+KRLNLD            M+ SS
Sbjct: 119 DHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASS 178

Query: 653 DGKE-NNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALL 829
           + ++ N D E   +++L+REYSG+TDL SLDWKKMKIP VLPSSEH WLFKLMQPMKA+L
Sbjct: 179 ERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAIL 238

Query: 830 QVKENLK 850
           QVKENL+
Sbjct: 239 QVKENLQ 245


>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
           trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
           sigma subunit SigE family protein [Populus trichocarpa]
          Length = 512

 Score =  224 bits (572), Expect = 2e-56
 Identities = 128/246 (52%), Positives = 162/246 (65%), Gaps = 1/246 (0%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVV+V SSAS+TPLGLS +FST+ S  KRP+I+AF  +K+ NT+L+  HE I LP +T 
Sbjct: 1   MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60

Query: 299 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDTD 478
           K  K L KS KSS R+KAV              Y+EAAAKLENIYKLS  TD SD ED  
Sbjct: 61  KGKKRLGKSKKSSNRLKAVRTEVSPCTLLVD--YNEAAAKLENIYKLSPGTDTSDVEDAS 118

Query: 479 RLMXXXXXTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVISSD 655
            ++      K+K+ E D++ E      +VR+  KKAKRL+L+            +V S+ 
Sbjct: 119 GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178

Query: 656 GKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQV 835
            +++   E   ++ L+REYS STDLVSLDWKKMKIP VL SSEH WLFKLMQPMKALLQV
Sbjct: 179 KRKDRKNENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQV 238

Query: 836 KENLKK 853
           KE+L++
Sbjct: 239 KEHLQE 244


>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
           gi|590673674|ref|XP_007038960.1| Sigma factor E isoform
           1 [Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
           factor E isoform 1 [Theobroma cacao]
           gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
           [Theobroma cacao]
          Length = 516

 Score =  206 bits (525), Expect = 7e-51
 Identities = 118/246 (47%), Positives = 152/246 (61%), Gaps = 1/246 (0%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVV+V SSA++TPLGLS +FST R   +RP+ +AF  DK+ NTAL+T  E I LP +T 
Sbjct: 1   MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60

Query: 299 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDTD 478
           KEH   R   K   ++                 Y+EAAAKLENIYKLS  T  SD E+ +
Sbjct: 61  KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120

Query: 479 RLMXXXXXTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVISSD 655
             +      +K+ +ESDE+        VVR+   + KRL+LD             V+S  
Sbjct: 121 GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180

Query: 656 GKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQV 835
            K++++ E   ++RL+R+YS STDLVSLDW+KMKIP VLPS EH WLFKLMQPMKALLQ 
Sbjct: 181 RKKSSENESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQA 240

Query: 836 KENLKK 853
           KENL+K
Sbjct: 241 KENLQK 246


>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
           gi|462415472|gb|EMJ20209.1| hypothetical protein
           PRUPE_ppa004259mg [Prunus persica]
          Length = 519

 Score =  203 bits (517), Expect = 6e-50
 Identities = 127/250 (50%), Positives = 159/250 (63%), Gaps = 5/250 (2%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV SSAS+TPLGLS + +  RS L++P+I+AF TD+   TAL+   E I LP +T 
Sbjct: 1   MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 299 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDI-SDSED 472
           K+H K L K+ K +K VK+               Y+EAAAKLEN+YK S  T+  SD ED
Sbjct: 61  KKHQKRLGKARKLAKSVKSATTDVASPCTLEVD-YNEAAAKLENLYKRSPETEANSDVED 119

Query: 473 TDRLMXXXXXTKKKVEESD-EQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVI 646
            D LM      +KK  ESD ++ E    + VVR+  KKAKRL+L+            ++ 
Sbjct: 120 VDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVIS 179

Query: 647 SSDGK-ENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 823
           S   K ++   E   +E L+REYS STDLVSLDWKKMKIP VL SSEHAWLFKLMQPMK 
Sbjct: 180 SIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKG 239

Query: 824 LLQVKENLKK 853
           LL+VKENL+K
Sbjct: 240 LLEVKENLQK 249


>ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
           gi|462415471|gb|EMJ20208.1| hypothetical protein
           PRUPE_ppa004259mg [Prunus persica]
          Length = 390

 Score =  203 bits (517), Expect = 6e-50
 Identities = 127/250 (50%), Positives = 159/250 (63%), Gaps = 5/250 (2%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV SSAS+TPLGLS + +  RS L++P+I+AF TD+   TAL+   E I LP +T 
Sbjct: 1   MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60

Query: 299 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDI-SDSED 472
           K+H K L K+ K +K VK+               Y+EAAAKLEN+YK S  T+  SD ED
Sbjct: 61  KKHQKRLGKARKLAKSVKSATTDVASPCTLEVD-YNEAAAKLENLYKRSPETEANSDVED 119

Query: 473 TDRLMXXXXXTKKKVEESD-EQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVI 646
            D LM      +KK  ESD ++ E    + VVR+  KKAKRL+L+            ++ 
Sbjct: 120 VDGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVIS 179

Query: 647 SSDGK-ENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 823
           S   K ++   E   +E L+REYS STDLVSLDWKKMKIP VL SSEHAWLFKLMQPMK 
Sbjct: 180 SIVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKG 239

Query: 824 LLQVKENLKK 853
           LL+VKENL+K
Sbjct: 240 LLEVKENLQK 249


>ref|XP_004234180.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform 2 [Solanum
           lycopersicum]
          Length = 487

 Score =  202 bits (514), Expect = 1e-49
 Identities = 123/246 (50%), Positives = 153/246 (62%), Gaps = 2/246 (0%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV SSAS++PLGLS+RFS    PLKRPVI++F  D TKNT L++  E IS P +T 
Sbjct: 1   MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60

Query: 299 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDT 475
           KE+ K  R+ +K ++RV AV              YSEAAAKLE+IYK S  T   ++E  
Sbjct: 61  KENEKRSRRVSKRTERVHAVTIEAPPSTLELD--YSEAAAKLESIYKRSLETASPNTEVK 118

Query: 476 DRLMXXXXXTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVISS 652
           D L+     T+K++ ESDE+ +KE+  NVV++  KK+KRLNLD                 
Sbjct: 119 DHLVKRRPRTRKRIVESDEEAKKEVVDNVVKNRRKKSKRLNLDQRIA------------- 165

Query: 653 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 832
                          LL+   G+TDL SLDWKKMKIP VLPSSEH WLFKLMQPMKA+LQ
Sbjct: 166 ---------------LLKNKEGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQ 210

Query: 833 VKENLK 850
           VKENL+
Sbjct: 211 VKENLQ 216


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X1 [Glycine
           max] gi|571496981|ref|XP_006593757.1| PREDICTED: RNA
           polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X2 [Glycine
           max]
          Length = 512

 Score =  199 bits (505), Expect = 1e-48
 Identities = 118/247 (47%), Positives = 158/247 (63%), Gaps = 2/247 (0%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGV+TV +SA++TPL L+ R  +H+   KRP+ILAF  +K+  T L++  E I LP +T 
Sbjct: 1   MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60

Query: 299 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDT 475
           K+H K + K+++S KRV+AV              Y+EAAAKLENIYKLS  +D  + ED 
Sbjct: 61  KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVD-YNEAAAKLENIYKLSPVSDTCNVEDI 119

Query: 476 DRLMXXXXXTKKKVEESDEQVEKEIFHNVVRS-HKKAKRLNLDXXXXXXXXXXXXMVISS 652
           D  +      +KKV E  +    +   NVVR+ +KKAKRL+LD            ++  +
Sbjct: 120 DSKIERVLRRRKKVSEERDDGNCD---NVVRNQNKKAKRLSLDKRIALKNNAKEEVIDQT 176

Query: 653 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 832
             K N      +++ L+R+YS STDLVS+DWKKMKIP VLPSSEHAWLFKLMQPMKALLQ
Sbjct: 177 QKKRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMQPMKALLQ 236

Query: 833 VKENLKK 853
            KE+LK+
Sbjct: 237 AKEDLKE 243


>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
           gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
           rpoD [Medicago truncatula]
          Length = 514

 Score =  191 bits (484), Expect = 4e-46
 Identities = 121/247 (48%), Positives = 148/247 (59%), Gaps = 2/247 (0%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV SSA++TPLGL+A+FSTH   LKRP+ +AF  DK  +TAL+   E I       
Sbjct: 1   MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60

Query: 299 KEHKI-LRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDT 475
           K HK  + K+ K  K+ +AV              Y+EAAA LENIYKLS  TDI D++  
Sbjct: 61  KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVD-YNEAAAILENIYKLSPTTDICDADYI 119

Query: 476 DRLMXXXXXTKKKVEESDEQVEKEIFHNVVRSHK-KAKRLNLDXXXXXXXXXXXXMVISS 652
           +R +       KK+   D   E      VVR+ K KAKR+NLD             VI +
Sbjct: 120 ERKIKRVSRRGKKI--GDVSKEDSNSDRVVRNQKTKAKRMNLDERIALKTSENSEDVIPT 177

Query: 653 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 832
             K N       ++ LLREYS   DLVSLDWKKMKIP VLPSSEHA+LFKLMQPMKALLQ
Sbjct: 178 RKKRNPRSRVEKIDELLREYSVPADLVSLDWKKMKIPPVLPSSEHAFLFKLMQPMKALLQ 237

Query: 833 VKENLKK 853
           VK++L+K
Sbjct: 238 VKDDLQK 244


>ref|XP_004308009.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 520

 Score =  190 bits (483), Expect = 5e-46
 Identities = 125/251 (49%), Positives = 154/251 (61%), Gaps = 6/251 (2%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARF-STHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDT 295
           MGVVTV SS S+TPLGLS    S+ RS L++P+I+AF TDK+   AL+   E + LP +T
Sbjct: 1   MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET 60

Query: 296 PKE-HKILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSED 472
            K+  K L K+ K  K VKA               Y+EAAAKLEN+YK S  T+ SD E+
Sbjct: 61  GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELD-YNEAAAKLENLYKRSPETEASDVEN 119

Query: 473 TDRLMXXXXXTK-KKVEESDEQVEKEIFHN-VVRS-HKKAKRLNLDXXXXXXXXXXXXMV 643
            D LM      + KK+ E D++VEK    + VVRS  KKAKRL+LD            + 
Sbjct: 120 VDGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVA 179

Query: 644 ISSDGKENND-VEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMK 820
            S   K  +   E   +E L+REYS STDLVSLDWKKM+IP VL SSEH WLFKLMQPMK
Sbjct: 180 ASVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMK 239

Query: 821 ALLQVKENLKK 853
            LL+VKE L+K
Sbjct: 240 GLLEVKEILQK 250


>gb|EXB72455.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 517

 Score =  186 bits (473), Expect = 7e-45
 Identities = 126/252 (50%), Positives = 156/252 (61%), Gaps = 7/252 (2%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSP-LKRPVILAFNTDKTKNTALITNHEPISLPSDT 295
           MGVVTV SSAS+TPLGLS +FS++RS  LK+P+I+AF  DK+  T L+   + I LP +T
Sbjct: 1   MGVVTVSSSASRTPLGLSLKFSSNRSSVLKKPLIVAFKGDKSNKTVLVAPQDQIILPVET 60

Query: 296 PKEHKI-LRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSED 472
            KE K  + K+ KSS RVKAV              Y+EAAAKLENI+KLSS    +D ED
Sbjct: 61  RKEVKSRVGKAKKSSNRVKAVATDEASTSTMEVD-YNEAAAKLENIFKLSS----ADVED 115

Query: 473 TDRLMXXXXXTKKKV-EESDEQVEKE--IFHNVVRSHKK-AKRLNLDXXXXXXXXXXXXM 640
              L       + KV  ESDE+  K+      VVR+ KK AKRL+L             +
Sbjct: 116 AVGLTSRGRRRRSKVIGESDERAGKKSTTSDTVVRNRKKKAKRLSLHKRVELKRDKEENV 175

Query: 641 VISSDGKENNDV-EGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPM 817
            +    K    + E   +E+L+REYS STDLVSLDWKKMKIP VLPSSEH WLFKLMQP+
Sbjct: 176 AVVLVRKRRESLNEEEKIEKLVREYSASTDLVSLDWKKMKIPPVLPSSEHTWLFKLMQPL 235

Query: 818 KALLQVKENLKK 853
           K L QV E+L+K
Sbjct: 236 KQLFQVGEDLQK 247


>ref|XP_002513587.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223547495|gb|EEF48990.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 501

 Score =  185 bits (470), Expect = 2e-44
 Identities = 112/246 (45%), Positives = 148/246 (60%), Gaps = 1/246 (0%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVT  SSA++TPLGLS +FST+RS +KR +++AF  DK  +  L+   E   LP +T 
Sbjct: 1   MGVVTASSSAARTPLGLSLKFSTYRSTVKRSLVVAFKEDKANDIILVPPRERTPLPIETS 60

Query: 299 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDTD 478
           K  K   +  K+++ V +               Y+EAAAKLENIYKLS  TD SD  D +
Sbjct: 61  KGKK---RRGKTNREVSS---------GTLEVDYNEAAAKLENIYKLSPATDTSDV-DIN 107

Query: 479 RLMXXXXXTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVISSD 655
            L+      K+K  E DE+ E      +VR+  KK KRL+LD            +V    
Sbjct: 108 GLIRKGRQRKRKTGEGDEKAENRTSRTIVRNRAKKTKRLSLDKRIALKKNEEEEVVGPIR 167

Query: 656 GKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQV 835
            K+++  +   +E L+R YS ST+LVSLDW+KMKIP VLPS+EHAWLFKLMQPMK LL V
Sbjct: 168 KKKDSKDDNEKIEELVRTYSASTNLVSLDWRKMKIPPVLPSTEHAWLFKLMQPMKTLLPV 227

Query: 836 KENLKK 853
           K +L+K
Sbjct: 228 KADLQK 233


>ref|NP_001254001.1| RNA polymerase sigma factor rpoD-like [Glycine max]
           gi|382365028|dbj|BAM05477.1| sigma-like factor 5A
           [Glycine max]
          Length = 512

 Score =  184 bits (466), Expect = 5e-44
 Identities = 112/246 (45%), Positives = 153/246 (62%), Gaps = 2/246 (0%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV + A++TPL L+ R ++H+   KRP+I+AF  +K    AL++  E I LP +T 
Sbjct: 1   MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA 60

Query: 299 K-EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDT 475
           K + K + K+++S KRV+AV              Y+EAAAKLENIYKLS  +D  + ED 
Sbjct: 61  KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMD-YNEAAAKLENIYKLSPVSDTCNMEDI 119

Query: 476 DRLMXXXXXTKKKVEESDEQVEKEIFHNVVRS-HKKAKRLNLDXXXXXXXXXXXXMVISS 652
           D  +      ++KV    +    +I   VVR+ +KKAKRL+LD            ++  +
Sbjct: 120 DSKVERVLWRRRKVGNEHDDENCDI---VVRNQNKKAKRLSLDKRITLKNNAKEEVIDQT 176

Query: 653 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 832
               N      +++ L+R+YS STDLVS+DWKKMKIP VLPSSEHAWLFKLMQPMKALLQ
Sbjct: 177 QKIRNVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQ 236

Query: 833 VKENLK 850
            KE+L+
Sbjct: 237 AKEDLQ 242


>ref|XP_007161346.1| hypothetical protein PHAVU_001G061400g [Phaseolus vulgaris]
           gi|561034810|gb|ESW33340.1| hypothetical protein
           PHAVU_001G061400g [Phaseolus vulgaris]
          Length = 511

 Score =  183 bits (465), Expect = 6e-44
 Identities = 112/248 (45%), Positives = 156/248 (62%), Gaps = 3/248 (1%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV +SA++TPL LS +  + +   KR +I+AF  +K   T L++  E I LP +T 
Sbjct: 1   MGVVTVSTSAARTPLRLSTKLISLQQAHKRLLIVAFKGNKLNKTTLVSPKEQIPLPLETA 60

Query: 299 KEH-KILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDT 475
           K+H K + K+  S KRV+AV              Y+EAAAKLENIYKLSS +   D+ED 
Sbjct: 61  KKHRKRIGKTNDSVKRVRAVSTDETTPFTLDVD-YNEAAAKLENIYKLSSVSSTCDTEDI 119

Query: 476 DRLMXXXXXTKKKV-EESDEQVEKEIFHNVVRSHKKAKRLNLDXXXXXXXXXXXXMVISS 652
           D         +K V +E D++ +  +  N    +KKAKRL+LD            +++ +
Sbjct: 120 DSKTKRVLRRRKNVGDEHDDRNDGSVVRN---QNKKAKRLSLDKRIALKRNPKQEVIVQA 176

Query: 653 DGKEN-NDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALL 829
             K + N +E  +++ L+REYS STDLVS+DWKK+KIP VLPSSEHAWLFKLM+PMK LL
Sbjct: 177 QKKRDVNRIE--NIDALIREYSASTDLVSMDWKKIKIPPVLPSSEHAWLFKLMEPMKELL 234

Query: 830 QVKENLKK 853
           QV+E+L++
Sbjct: 235 QVREDLQE 242


>ref|XP_007137569.1| hypothetical protein PHAVU_009G1376001g, partial [Phaseolus
           vulgaris] gi|561010656|gb|ESW09563.1| hypothetical
           protein PHAVU_009G1376001g, partial [Phaseolus vulgaris]
          Length = 398

 Score =  183 bits (465), Expect = 6e-44
 Identities = 106/245 (43%), Positives = 144/245 (58%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV SSA++TPLGL+ +FS +R  LKRP+I+AF  DK  ++AL+   E I +P +T 
Sbjct: 1   MGVVTVSSSAARTPLGLNTKFSCNR--LKRPLIIAFKGDKHDDSALVATQEKIPVPVETS 58

Query: 299 KEHKILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDTD 478
           K  K      K   + + V              Y+EAAA LENIYKLS  +D +++E  D
Sbjct: 59  KTQKKKMGKAKKLPKRERVAFVEENSQTSLDVDYNEAAAMLENIYKLSPASDTANAECMD 118

Query: 479 RLMXXXXXTKKKVEESDEQVEKEIFHNVVRSHKKAKRLNLDXXXXXXXXXXXXMVISSDG 658
             +      +KK+ +  E+ +      V   +KKAKRL LD             V+ +  
Sbjct: 119 GKIKRVSRRRKKIVDDCEEKDVNDDRVVRNQNKKAKRLGLDQRISLKSNTDGDEVVPTQK 178

Query: 659 KENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQVK 838
           K N +     +E L+REYS STD V +DW++MKIP VL SSEHAWLFKLMQP+K +LQVK
Sbjct: 179 KRNANNSVEKIEELIREYSASTDFVGMDWRRMKIPPVLSSSEHAWLFKLMQPVKTILQVK 238

Query: 839 ENLKK 853
           E+L+K
Sbjct: 239 EDLQK 243


>ref|XP_006422121.1| hypothetical protein CICLE_v10004760mg [Citrus clementina]
           gi|567858878|ref|XP_006422122.1| hypothetical protein
           CICLE_v10004760mg [Citrus clementina]
           gi|568874930|ref|XP_006490565.1| PREDICTED: RNA
           polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X1 [Citrus
           sinensis] gi|568874932|ref|XP_006490566.1| PREDICTED:
           RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X2 [Citrus
           sinensis] gi|568874934|ref|XP_006490567.1| PREDICTED:
           RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like isoform X3 [Citrus
           sinensis] gi|557523994|gb|ESR35361.1| hypothetical
           protein CICLE_v10004760mg [Citrus clementina]
           gi|557523995|gb|ESR35362.1| hypothetical protein
           CICLE_v10004760mg [Citrus clementina]
          Length = 513

 Score =  182 bits (461), Expect = 2e-43
 Identities = 112/247 (45%), Positives = 151/247 (61%), Gaps = 2/247 (0%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVT+ SS +++P+GLS    +HRS  KRP+I+AF  DK+ N AL +  E I LP +TP
Sbjct: 1   MGVVTISSSPARSPIGLST--ISHRSTSKRPLIVAFKADKSNNQALFSPQEQIPLPIETP 58

Query: 299 KEHKILRK-STKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSEDT 475
           K H+  R+ S K  +RVK V              Y+EAAAKLENIYKLS     S+ +  
Sbjct: 59  KRHQKRRENSRKRLERVKGVFSDEASPCTLDVD-YNEAAAKLENIYKLSPAVTTSEVKYA 117

Query: 476 DRLMXXXXXTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVISS 652
           D ++      +K++ E +++ +      VVR+  K+ KRL+LD            +V  +
Sbjct: 118 DGVVKRGRQRRKRIGEVEKKSDDVSGKPVVRNQVKRPKRLSLDKRIELRKNEDEKVVTKT 177

Query: 653 DGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKALLQ 832
              ++ D E   +E+L+REYS STDLVSLDWKKMKIP VL S+EH WLFKLMQPMK  +Q
Sbjct: 178 RKTDSKD-EHEKIEKLVREYSYSTDLVSLDWKKMKIPPVLSSTEHTWLFKLMQPMKVFVQ 236

Query: 833 VKENLKK 853
           VKE L+K
Sbjct: 237 VKEQLQK 243


>ref|XP_006578934.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Glycine max]
          Length = 509

 Score =  181 bits (459), Expect = 3e-43
 Identities = 118/251 (47%), Positives = 150/251 (59%), Gaps = 6/251 (2%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVVTV  SAS+TPLG + +FSTHR  LKRP+I+AF  DK  ++AL+   E I +P +T 
Sbjct: 1   MGVVTVSGSASRTPLGFNTKFSTHR--LKRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58

Query: 299 K--EHKILRKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSED 472
           K  + K + KS K  KR  +               Y+EAAA LENIYKLS  +   ++E 
Sbjct: 59  KKTQKKRIGKSNKLPKRESS--------PSSMDVDYNEAAAMLENIYKLSPASHTGNAEC 110

Query: 473 TD-RLMXXXXXTKKKVEESDEQVEKEIFHNVVR---SHKKAKRLNLDXXXXXXXXXXXXM 640
            D ++       KK V+ES+E+  K     VVR    +KKAKRL LD             
Sbjct: 111 IDDKIKRVSRRGKKVVDESEEKELKG--DRVVRRQNKNKKAKRLTLDQRISLKNNKRGDE 168

Query: 641 VISSDGKENNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMK 820
           VI +  K N       +E L+REYS S D +S+DWK+M+IP VL SSEHAWLFKLMQPMK
Sbjct: 169 VIPTRKKRNFRNRIEKIEELIREYSVSNDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMK 228

Query: 821 ALLQVKENLKK 853
           ALLQVKE+L+K
Sbjct: 229 ALLQVKEDLQK 239


>ref|XP_006394670.1| hypothetical protein EUTSA_v10004166mg [Eutrema salsugineum]
           gi|557091309|gb|ESQ31956.1| hypothetical protein
           EUTSA_v10004166mg [Eutrema salsugineum]
          Length = 463

 Score =  177 bits (450), Expect = 3e-42
 Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 5/250 (2%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVV + SSA+++PLGLS+   THRS LK+P I+AF  D + N+ALI   E I +P++  
Sbjct: 1   MGVVYISSSAARSPLGLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAEKQ 60

Query: 299 KEHKIL--RKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSED 472
           KE +++  RK  K+ K+  ++              Y+EAAA+LE+IYKLS  T + D  D
Sbjct: 61  KEKRVVTKRKPCKTPKKPSSLDHNLAPSCSLGVD-YNEAAARLESIYKLSPATSVEDDID 119

Query: 473 TDRLMXXXXXTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVIS 649
             ++       +K+  E     EK++   VVR++  K KRL+LD             ++ 
Sbjct: 120 GSKVKVSRRRRRKEGGE-----EKKV---VVRNNGMKEKRLSLDKRIALKRNIQEKPLVP 171

Query: 650 SDGKE--NNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 823
           S  K+      E   +ERL+R+YS S D+VSLDWKKMKIP VLPS+EHAWLFKLMQPMKA
Sbjct: 172 SAQKKVTKKQQEEEKIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKA 231

Query: 824 LLQVKENLKK 853
           LLQVK+ L+K
Sbjct: 232 LLQVKDELQK 241


>dbj|BAJ34205.1| unnamed protein product [Thellungiella halophila]
          Length = 511

 Score =  177 bits (450), Expect = 3e-42
 Identities = 111/250 (44%), Positives = 153/250 (61%), Gaps = 5/250 (2%)
 Frame = +2

Query: 119 MGVVTVPSSASQTPLGLSARFSTHRSPLKRPVILAFNTDKTKNTALITNHEPISLPSDTP 298
           MGVV + SSA+++PLGLS+   THRS LK+P I+AF  D + N+ALI   E I +P++  
Sbjct: 1   MGVVFISSSAARSPLGLSSDLLTHRSSLKKPSIVAFKADDSTNSALIIPSEQILIPAEKQ 60

Query: 299 KEHKIL--RKSTKSSKRVKAVXXXXXXXXXXXXXXYSEAAAKLENIYKLSSPTDISDSED 472
           KE +++  RK  K+ K+  ++              Y+EAAA+LE+IYKLS  T + D  D
Sbjct: 61  KEKRVVTKRKPCKTPKKPSSLDHNLAPSCSLGVD-YNEAAARLESIYKLSPATSVEDDID 119

Query: 473 TDRLMXXXXXTKKKVEESDEQVEKEIFHNVVRSH-KKAKRLNLDXXXXXXXXXXXXMVIS 649
             ++       +K+  E     EK++   VVR++  K KRL+LD             ++ 
Sbjct: 120 GSKVKVSRRRRRKEGGE-----EKKV---VVRNNGMKEKRLSLDKRIALKRNIQEKPLVP 171

Query: 650 SDGKE--NNDVEGGDVERLLREYSGSTDLVSLDWKKMKIPHVLPSSEHAWLFKLMQPMKA 823
           S  K+      E   +ERL+R+YS S D+VSLDWKKMKIP VLPS+EHAWLFKLMQPMKA
Sbjct: 172 SAQKKVTKKQQEEEKIERLVRDYSASHDIVSLDWKKMKIPPVLPSTEHAWLFKLMQPMKA 231

Query: 824 LLQVKENLKK 853
           LLQVK+ L+K
Sbjct: 232 LLQVKDELQK 241