BLASTX nr result

ID: Akebia24_contig00004920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00004920
         (429 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS68105.1| 40S ribosomal protein S28 [Triticum urartu]            101   9e-20
tpg|DAA43568.1| TPA: 40S ribosomal protein S28, partial [Zea mays]    101   9e-20
gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indi...   101   9e-20
gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticu...   101   9e-20
ref|XP_003575874.1| PREDICTED: uncharacterized protein LOC100831...   101   1e-19
ref|XP_003575873.1| PREDICTED: 40S ribosomal protein S28-like [B...   101   1e-19
gb|EMT05432.1| 40S ribosomal protein S28 [Aegilops tauschii]          100   3e-19
tpg|DAA43569.1| TPA: 40S ribosomal protein S28 [Zea mays]             100   3e-19
gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japo...   100   3e-19
gb|EEC66929.1| hypothetical protein OsI_33537 [Oryza sativa Indi...   100   3e-19
gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays]                   100   3e-19
ref|NP_001064584.1| Os10g0411700 [Oryza sativa Japonica Group] g...   100   3e-19
ref|XP_003574115.1| PREDICTED: 40S ribosomal protein S28-like [B...   100   4e-19
emb|CAA04565.1| rpS28 [Hordeum vulgare subsp. vulgare]                 97   2e-18
ref|NP_001105548.1| 40S ribosomal protein S28 [Zea mays] gi|1173...    97   2e-18
ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [C...    97   3e-18
ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citr...    97   3e-18
gb|ACG26633.1| 40S ribosomal protein S28 [Zea mays]                    97   3e-18
ref|XP_007029134.1| Nucleic acid-binding, OB-fold-like protein [...    96   4e-18
ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus com...    96   4e-18

>gb|EMS68105.1| 40S ribosomal protein S28 [Triticum urartu]
          Length = 115

 Score =  101 bits (252), Expect = 9e-20
 Identities = 52/55 (94%), Positives = 54/55 (98%), Gaps = 1/55 (1%)
 Frame = -1

Query: 369 LW-SMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           LW +MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 47  LWCNMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 101


>tpg|DAA43568.1| TPA: 40S ribosomal protein S28, partial [Zea mays]
          Length = 103

 Score =  101 bits (252), Expect = 9e-20
 Identities = 51/52 (98%), Positives = 52/52 (100%)
 Frame = -1

Query: 363 SMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           SMD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 38  SMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 89


>gb|EEC74585.1| hypothetical protein OsI_10164 [Oryza sativa Indica Group]
          Length = 101

 Score =  101 bits (252), Expect = 9e-20
 Identities = 51/52 (98%), Positives = 52/52 (100%)
 Frame = -1

Query: 363 SMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           SMD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 36  SMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 87


>gb|AAP80664.1|AF479045_1 S28 ribosomal protein, partial [Triticum aestivum]
          Length = 86

 Score =  101 bits (252), Expect = 9e-20
 Identities = 51/52 (98%), Positives = 52/52 (100%)
 Frame = -1

Query: 363 SMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           SMD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 21  SMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 72


>ref|XP_003575874.1| PREDICTED: uncharacterized protein LOC100831577 [Brachypodium
           distachyon]
          Length = 554

 Score =  101 bits (251), Expect = 1e-19
 Identities = 50/52 (96%), Positives = 52/52 (100%)
 Frame = -1

Query: 363 SMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           SMD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDI
Sbjct: 489 SMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDI 540


>ref|XP_003575873.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium distachyon]
          Length = 115

 Score =  101 bits (251), Expect = 1e-19
 Identities = 50/52 (96%), Positives = 52/52 (100%)
 Frame = -1

Query: 363 SMDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           SMD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDI
Sbjct: 50  SMDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDI 101


>gb|EMT05432.1| 40S ribosomal protein S28 [Aegilops tauschii]
          Length = 107

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 43  MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 93


>tpg|DAA43569.1| TPA: 40S ribosomal protein S28 [Zea mays]
          Length = 68

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 4   MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 54


>gb|EEE58387.1| hypothetical protein OsJ_09549 [Oryza sativa Japonica Group]
          Length = 93

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 29  MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 79


>gb|EEC66929.1| hypothetical protein OsI_33537 [Oryza sativa Indica Group]
          Length = 400

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 336 MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 386


>gb|ACG31085.1| 40S ribosomal protein S28 [Zea mays]
          Length = 65

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1   MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51


>ref|NP_001064584.1| Os10g0411700 [Oryza sativa Japonica Group]
           gi|226492207|ref|NP_001147283.1| 40S ribosomal protein
           S28 [Zea mays] gi|226528567|ref|NP_001147474.1| 40S
           ribosomal protein S28 [Zea mays]
           gi|226530547|ref|NP_001147106.1| 40S ribosomal protein
           S28 [Zea mays] gi|297600386|ref|NP_001049079.2|
           Os03g0167100 [Oryza sativa Japonica Group]
           gi|242042107|ref|XP_002468448.1| hypothetical protein
           SORBIDRAFT_01g046070 [Sorghum bicolor]
           gi|514816860|ref|XP_004983165.1| PREDICTED: 40S
           ribosomal protein S28-like [Setaria italica]
           gi|514821804|ref|XP_004985578.1| PREDICTED: 40S
           ribosomal protein S28-like [Setaria italica]
           gi|582044877|pdb|3J60|CC Chain c, Localization Of The
           Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-em
           Map Of Triticum Aestivum Translating 80s Ribosome
           gi|113639193|dbj|BAF26498.1| Os10g0411700 [Oryza sativa
           Japonica Group] gi|194704454|gb|ACF86311.1| unknown [Zea
           mays] gi|195605026|gb|ACG24343.1| 40S ribosomal protein
           S28 [Zea mays] gi|195605034|gb|ACG24347.1| 40S ribosomal
           protein S28 [Zea mays] gi|195607258|gb|ACG25459.1| 40S
           ribosomal protein S28 [Zea mays]
           gi|195609472|gb|ACG26566.1| 40S ribosomal protein S28
           [Zea mays] gi|195609816|gb|ACG26738.1| 40S ribosomal
           protein S28 [Zea mays] gi|195610066|gb|ACG26863.1| 40S
           ribosomal protein S28 [Zea mays]
           gi|195611640|gb|ACG27650.1| 40S ribosomal protein S28
           [Zea mays] gi|195618106|gb|ACG30883.1| 40S ribosomal
           protein S28 [Zea mays] gi|195618338|gb|ACG30999.1| 40S
           ribosomal protein S28 [Zea mays]
           gi|195618690|gb|ACG31175.1| 40S ribosomal protein S28
           [Zea mays] gi|195619662|gb|ACG31661.1| 40S ribosomal
           protein S28 [Zea mays] gi|195620148|gb|ACG31904.1| 40S
           ribosomal protein S28 [Zea mays]
           gi|195655603|gb|ACG47269.1| 40S ribosomal protein S28
           [Zea mays] gi|195655989|gb|ACG47462.1| 40S ribosomal
           protein S28 [Zea mays] gi|222612816|gb|EEE50948.1|
           hypothetical protein OsJ_31495 [Oryza sativa Japonica
           Group] gi|241922302|gb|EER95446.1| hypothetical protein
           SORBIDRAFT_01g046070 [Sorghum bicolor]
           gi|255674234|dbj|BAF10993.2| Os03g0167100 [Oryza sativa
           Japonica Group] gi|326509929|dbj|BAJ87180.1| predicted
           protein [Hordeum vulgare subsp. vulgare]
           gi|326526071|dbj|BAJ93212.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|413956006|gb|AFW88655.1| 40S
           ribosomal protein S28 isoform 1 [Zea mays]
           gi|413956007|gb|AFW88656.1| 40S ribosomal protein S28
           isoform 2 [Zea mays] gi|414865013|tpg|DAA43570.1| TPA:
           40S ribosomal protein S28 [Zea mays]
           gi|414866364|tpg|DAA44921.1| TPA: 40S ribosomal protein
           S28 isoform 1 [Zea mays] gi|414866365|tpg|DAA44922.1|
           TPA: 40S ribosomal protein S28 isoform 2 [Zea mays]
           gi|414866366|tpg|DAA44923.1| TPA: 40S ribosomal protein
           S28 isoform 3 [Zea mays] gi|414866367|tpg|DAA44924.1|
           TPA: 40S ribosomal protein S28 isoform 4 [Zea mays]
           gi|474386341|gb|EMS64988.1| 40S ribosomal protein S28
           [Triticum urartu] gi|475553296|gb|EMT11959.1| 40S
           ribosomal protein S28 [Aegilops tauschii]
          Length = 65

 Score =  100 bits (248), Expect = 3e-19
 Identities = 50/51 (98%), Positives = 51/51 (100%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI
Sbjct: 1   MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 51


>ref|XP_003574115.1| PREDICTED: 40S ribosomal protein S28-like [Brachypodium distachyon]
          Length = 65

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 49/51 (96%), Positives = 51/51 (100%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGP+REGDI
Sbjct: 1   MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPIREGDI 51


>emb|CAA04565.1| rpS28 [Hordeum vulgare subsp. vulgare]
          Length = 65

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLD QNRLIMRNVKGPVREGDI
Sbjct: 1   MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDHQNRLIMRNVKGPVREGDI 51


>ref|NP_001105548.1| 40S ribosomal protein S28 [Zea mays]
           gi|1173237|sp|P46302.1|RS28_MAIZE RecName: Full=40S
           ribosomal protein S28 gi|557682|emb|CAA57636.1| small
           subunit ribosomal protein S28 [Zea mays]
          Length = 65

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPV EGDI
Sbjct: 1   MDTQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVCEGDI 51


>ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [Citrus sinensis]
          Length = 65

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/51 (94%), Positives = 49/51 (96%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MDSQ+K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 1   MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 51


>ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citrus clementina]
           gi|557532022|gb|ESR43205.1| hypothetical protein
           CICLE_v10013157mg [Citrus clementina]
          Length = 114

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/51 (94%), Positives = 49/51 (96%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MDSQ+K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 50  MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 100


>gb|ACG26633.1| 40S ribosomal protein S28 [Zea mays]
          Length = 65

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MD+QVKLAVVVKVMGRTGSRGQVTQV+VKFLDDQNRLIMRNV GPVREGDI
Sbjct: 1   MDTQVKLAVVVKVMGRTGSRGQVTQVKVKFLDDQNRLIMRNVXGPVREGDI 51


>ref|XP_007029134.1| Nucleic acid-binding, OB-fold-like protein [Theobroma cacao]
           gi|508717739|gb|EOY09636.1| Nucleic acid-binding,
           OB-fold-like protein [Theobroma cacao]
          Length = 65

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 48/51 (94%), Positives = 49/51 (96%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MDSQ+K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDI
Sbjct: 1   MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDI 51


>ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis]
           gi|255581574|ref|XP_002531592.1| ribosomal protein S28,
           putative [Ricinus communis] gi|223528788|gb|EEF30795.1|
           ribosomal protein S28, putative [Ricinus communis]
           gi|223539919|gb|EEF41497.1| ribosomal protein S28,
           putative [Ricinus communis] gi|313586485|gb|ADR71253.1|
           40S ribosomal protein S28A [Hevea brasiliensis]
           gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B
           [Hevea brasiliensis]
          Length = 65

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = -1

Query: 360 MDSQVKLAVVVKVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVREGDI 208
           MDSQ+K AVVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGD+
Sbjct: 1   MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 51


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