BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00004743
         (993 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              279   1e-72
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   254   3e-65
ref|XP_007018443.1| Pre-mRNA-processing protein 40A isoform 8 [T...   229   1e-57
ref|XP_007018442.1| Pre-mRNA-processing protein 40A isoform 7 [T...   229   1e-57
ref|XP_007018441.1| Pre-mRNA-processing protein 40A isoform 6 [T...   229   1e-57
ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [T...   229   1e-57
ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [T...   229   1e-57
ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [T...   229   1e-57
ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [T...   229   1e-57
ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prun...   229   1e-57
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A...   227   5e-57
ref|XP_002320019.2| FF domain-containing family protein [Populus...   192   2e-46
ref|XP_007160940.1| hypothetical protein PHAVU_001G029800g [Phas...   190   7e-46
ref|XP_007160939.1| hypothetical protein PHAVU_001G029800g [Phas...   190   7e-46
ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [T...   184   4e-44
ref|XP_002522113.1| protein binding protein, putative [Ricinus c...   182   2e-43
gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Mor...   179   1e-42
ref|XP_002300284.2| hypothetical protein POPTR_0001s29710g [Popu...   178   3e-42
ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-l...   175   3e-41
ref|XP_006606005.1| PREDICTED: pre-mRNA-processing protein 40A-l...   171   6e-40

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  279 bits (714), Expect = 1e-72
 Identities = 154/257 (59%), Positives = 174/257 (67%), Gaps = 9/257 (3%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHH-VAQQQTQPFISVASQQFRPVGQG 644
           MA NPQSSGAQPLRPP  GS GPQNFGPP+SMQF   V  QQ  PFI  ASQQFRP+GQ 
Sbjct: 1   MANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQN 60

Query: 643 ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQP 464
           IS  NVG P                           PSSQ IPMPY+Q +RP+TS SPQP
Sbjct: 61  ISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQP 120

Query: 463 N--TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQLI-----PAGGQPW 305
           N    PL+++M G+ G G P SSSYTFAP+S+GQPQ+ +N S+Q+Q I     P GGQPW
Sbjct: 121 NQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTINASAQFQPISQMHAPVGGQPW 180

Query: 304 LLSGSQNAPPVSQVQQIGQQLS-SATVAVTNVQPNSTMLSSSDWQEHTSANGRRYYYNKK 128
           L SGSQ+   V+ V Q GQQ S +A +   NV PN T  SSSDWQEHTSA+GRRYYYNKK
Sbjct: 181 LSSGSQSGALVTPVHQAGQQPSVTADIPAGNV-PNPTHQSSSDWQEHTSADGRRYYYNKK 239

Query: 127 TRQSSWEKPLELMTPIE 77
           TR SSWEKPLELMTPIE
Sbjct: 240 TRLSSWEKPLELMTPIE 256


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score =  254 bits (650), Expect = 3e-65
 Identities = 148/269 (55%), Positives = 168/269 (62%), Gaps = 11/269 (4%)
 Frame = -3

Query: 850 VFAAVWLLVEMAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHH-VAQQQTQPFISVA 674
           +F    L   MA NPQSSGAQPLRPP  GS GPQNFGPP+SMQF   V  QQ  PFI  A
Sbjct: 5   LFEEACLCAGMANNPQSSGAQPLRPPAVGSMGPQNFGPPLSMQFRPAVPGQQGHPFIPAA 64

Query: 673 SQQFRPVGQGISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPS 494
           SQQFRP+GQ IS  NVG P                           PSSQ IPMPY+Q +
Sbjct: 65  SQQFRPIGQNISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQN 124

Query: 493 RPITSGSPQPN--TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQLI-- 326
           RP+TS SPQPN    PL+++M G+            FAP+S+GQPQ+ +N S+Q+Q I  
Sbjct: 125 RPLTSSSPQPNQTAPPLNSHMPGL------------FAPASFGQPQSTINASAQFQPISQ 172

Query: 325 ---PAGGQPWLLSGSQNAPPVSQVQQIGQQLSSAT---VAVTNVQPNSTMLSSSDWQEHT 164
              P GGQPWL SGSQ+   V+ V Q GQQ S      V+  NV PN T  SSSDWQEHT
Sbjct: 173 MHAPVGGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPVSAGNV-PNPTHQSSSDWQEHT 231

Query: 163 SANGRRYYYNKKTRQSSWEKPLELMTPIE 77
           SA+GRRYYYNKKTR SSWEKPLELMTPIE
Sbjct: 232 SADGRRYYYNKKTRLSSWEKPLELMTPIE 260


>ref|XP_007018443.1| Pre-mRNA-processing protein 40A isoform 8 [Theobroma cacao]
           gi|508723771|gb|EOY15668.1| Pre-mRNA-processing protein
           40A isoform 8 [Theobroma cacao]
          Length = 789

 Score =  229 bits (584), Expect = 1e-57
 Identities = 133/262 (50%), Positives = 162/262 (61%), Gaps = 14/262 (5%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVA-QQQTQPFISVASQQFRPVGQG 644
           MA N Q S AQP  PP  GS GPQ++G P+S QF  V   QQ Q F+  ASQQFRPVGQ 
Sbjct: 1   MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 643 ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQP 464
           +  SNVG+P                           PS+Q + +P+ Q +RP+TSGSPQ 
Sbjct: 60  VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 463 N--TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQ--------LIPAGG 314
           +    PL+++M G+G  G P SSSY++ PSS+GQPQN V+ SSQ+Q        + P  G
Sbjct: 120 HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 313 QPWLLSGSQNAPPVSQVQQIGQQ---LSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRY 143
           QPWL SG+Q+      +QQ GQQ   +SSA  A     P  T  S+SDWQEHTSA+GRRY
Sbjct: 180 QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAAN--APIHTPPSASDWQEHTSADGRRY 237

Query: 142 YYNKKTRQSSWEKPLELMTPIE 77
           YYNKKTRQSSWEKPLELMTPIE
Sbjct: 238 YYNKKTRQSSWEKPLELMTPIE 259


>ref|XP_007018442.1| Pre-mRNA-processing protein 40A isoform 7 [Theobroma cacao]
           gi|508723770|gb|EOY15667.1| Pre-mRNA-processing protein
           40A isoform 7 [Theobroma cacao]
          Length = 787

 Score =  229 bits (584), Expect = 1e-57
 Identities = 133/262 (50%), Positives = 162/262 (61%), Gaps = 14/262 (5%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVA-QQQTQPFISVASQQFRPVGQG 644
           MA N Q S AQP  PP  GS GPQ++G P+S QF  V   QQ Q F+  ASQQFRPVGQ 
Sbjct: 1   MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 643 ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQP 464
           +  SNVG+P                           PS+Q + +P+ Q +RP+TSGSPQ 
Sbjct: 60  VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 463 N--TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQ--------LIPAGG 314
           +    PL+++M G+G  G P SSSY++ PSS+GQPQN V+ SSQ+Q        + P  G
Sbjct: 120 HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 313 QPWLLSGSQNAPPVSQVQQIGQQ---LSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRY 143
           QPWL SG+Q+      +QQ GQQ   +SSA  A     P  T  S+SDWQEHTSA+GRRY
Sbjct: 180 QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAAN--APIHTPPSASDWQEHTSADGRRY 237

Query: 142 YYNKKTRQSSWEKPLELMTPIE 77
           YYNKKTRQSSWEKPLELMTPIE
Sbjct: 238 YYNKKTRQSSWEKPLELMTPIE 259


>ref|XP_007018441.1| Pre-mRNA-processing protein 40A isoform 6 [Theobroma cacao]
           gi|508723769|gb|EOY15666.1| Pre-mRNA-processing protein
           40A isoform 6 [Theobroma cacao]
          Length = 774

 Score =  229 bits (584), Expect = 1e-57
 Identities = 133/262 (50%), Positives = 162/262 (61%), Gaps = 14/262 (5%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVA-QQQTQPFISVASQQFRPVGQG 644
           MA N Q S AQP  PP  GS GPQ++G P+S QF  V   QQ Q F+  ASQQFRPVGQ 
Sbjct: 1   MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 643 ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQP 464
           +  SNVG+P                           PS+Q + +P+ Q +RP+TSGSPQ 
Sbjct: 60  VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 463 N--TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQ--------LIPAGG 314
           +    PL+++M G+G  G P SSSY++ PSS+GQPQN V+ SSQ+Q        + P  G
Sbjct: 120 HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 313 QPWLLSGSQNAPPVSQVQQIGQQ---LSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRY 143
           QPWL SG+Q+      +QQ GQQ   +SSA  A     P  T  S+SDWQEHTSA+GRRY
Sbjct: 180 QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAAN--APIHTPPSASDWQEHTSADGRRY 237

Query: 142 YYNKKTRQSSWEKPLELMTPIE 77
           YYNKKTRQSSWEKPLELMTPIE
Sbjct: 238 YYNKKTRQSSWEKPLELMTPIE 259


>ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
           gi|508723768|gb|EOY15665.1| Pre-mRNA-processing protein
           40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  229 bits (584), Expect = 1e-57
 Identities = 133/262 (50%), Positives = 162/262 (61%), Gaps = 14/262 (5%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVA-QQQTQPFISVASQQFRPVGQG 644
           MA N Q S AQP  PP  GS GPQ++G P+S QF  V   QQ Q F+  ASQQFRPVGQ 
Sbjct: 1   MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 643 ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQP 464
           +  SNVG+P                           PS+Q + +P+ Q +RP+TSGSPQ 
Sbjct: 60  VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 463 N--TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQ--------LIPAGG 314
           +    PL+++M G+G  G P SSSY++ PSS+GQPQN V+ SSQ+Q        + P  G
Sbjct: 120 HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 313 QPWLLSGSQNAPPVSQVQQIGQQ---LSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRY 143
           QPWL SG+Q+      +QQ GQQ   +SSA  A     P  T  S+SDWQEHTSA+GRRY
Sbjct: 180 QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAAN--APIHTPPSASDWQEHTSADGRRY 237

Query: 142 YYNKKTRQSSWEKPLELMTPIE 77
           YYNKKTRQSSWEKPLELMTPIE
Sbjct: 238 YYNKKTRQSSWEKPLELMTPIE 259


>ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
           gi|508723767|gb|EOY15664.1| Pre-mRNA-processing protein
           40A isoform 4 [Theobroma cacao]
          Length = 844

 Score =  229 bits (584), Expect = 1e-57
 Identities = 133/262 (50%), Positives = 162/262 (61%), Gaps = 14/262 (5%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVA-QQQTQPFISVASQQFRPVGQG 644
           MA N Q S AQP  PP  GS GPQ++G P+S QF  V   QQ Q F+  ASQQFRPVGQ 
Sbjct: 1   MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 643 ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQP 464
           +  SNVG+P                           PS+Q + +P+ Q +RP+TSGSPQ 
Sbjct: 60  VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 463 N--TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQ--------LIPAGG 314
           +    PL+++M G+G  G P SSSY++ PSS+GQPQN V+ SSQ+Q        + P  G
Sbjct: 120 HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 313 QPWLLSGSQNAPPVSQVQQIGQQ---LSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRY 143
           QPWL SG+Q+      +QQ GQQ   +SSA  A     P  T  S+SDWQEHTSA+GRRY
Sbjct: 180 QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAAN--APIHTPPSASDWQEHTSADGRRY 237

Query: 142 YYNKKTRQSSWEKPLELMTPIE 77
           YYNKKTRQSSWEKPLELMTPIE
Sbjct: 238 YYNKKTRQSSWEKPLELMTPIE 259


>ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
           gi|508723766|gb|EOY15663.1| Pre-mRNA-processing protein
           40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  229 bits (584), Expect = 1e-57
 Identities = 133/262 (50%), Positives = 162/262 (61%), Gaps = 14/262 (5%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVA-QQQTQPFISVASQQFRPVGQG 644
           MA N Q S AQP  PP  GS GPQ++G P+S QF  V   QQ Q F+  ASQQFRPVGQ 
Sbjct: 1   MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 643 ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQP 464
           +  SNVG+P                           PS+Q + +P+ Q +RP+TSGSPQ 
Sbjct: 60  VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 463 N--TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQ--------LIPAGG 314
           +    PL+++M G+G  G P SSSY++ PSS+GQPQN V+ SSQ+Q        + P  G
Sbjct: 120 HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 313 QPWLLSGSQNAPPVSQVQQIGQQ---LSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRY 143
           QPWL SG+Q+      +QQ GQQ   +SSA  A     P  T  S+SDWQEHTSA+GRRY
Sbjct: 180 QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAAN--APIHTPPSASDWQEHTSADGRRY 237

Query: 142 YYNKKTRQSSWEKPLELMTPIE 77
           YYNKKTRQSSWEKPLELMTPIE
Sbjct: 238 YYNKKTRQSSWEKPLELMTPIE 259


>ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
           gi|590596803|ref|XP_007018437.1| Pre-mRNA-processing
           protein 40A isoform 1 [Theobroma cacao]
           gi|508723764|gb|EOY15661.1| Pre-mRNA-processing protein
           40A isoform 1 [Theobroma cacao]
           gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
           40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score =  229 bits (584), Expect = 1e-57
 Identities = 133/262 (50%), Positives = 162/262 (61%), Gaps = 14/262 (5%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVA-QQQTQPFISVASQQFRPVGQG 644
           MA N Q S AQP  PP  GS GPQ++G P+S QF  V   QQ Q F+  ASQQFRPVGQ 
Sbjct: 1   MANNSQPSSAQPHWPPAVGSLGPQSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ- 59

Query: 643 ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQP 464
           +  SNVG+P                           PS+Q + +P+ Q +RP+TSGSPQ 
Sbjct: 60  VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQS 119

Query: 463 N--TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQ--------LIPAGG 314
           +    PL+++M G+G  G P SSSY++ PSS+GQPQN V+ SSQ+Q        + P  G
Sbjct: 120 HQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVAG 179

Query: 313 QPWLLSGSQNAPPVSQVQQIGQQ---LSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRY 143
           QPWL SG+Q+      +QQ GQQ   +SSA  A     P  T  S+SDWQEHTSA+GRRY
Sbjct: 180 QPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAAN--APIHTPPSASDWQEHTSADGRRY 237

Query: 142 YYNKKTRQSSWEKPLELMTPIE 77
           YYNKKTRQSSWEKPLELMTPIE
Sbjct: 238 YYNKKTRQSSWEKPLELMTPIE 259


>ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
           gi|462423966|gb|EMJ28229.1| hypothetical protein
           PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  229 bits (584), Expect = 1e-57
 Identities = 134/259 (51%), Positives = 157/259 (60%), Gaps = 11/259 (4%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVAQ-QQTQPFISVASQQFRPVGQG 644
           MA NPQSS AQP RPP   S GPQ+FG   S+Q+  V   QQ Q FI  ASQQF+PVGQG
Sbjct: 1   MANNPQSSAAQPFRPPPVASLGPQSFGSSPSLQYRPVVPTQQGQQFIQSASQQFQPVGQG 60

Query: 643 ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQP 464
           I  SNVG+P                           PSSQA+PM Y+Q +RPITS   Q 
Sbjct: 61  IPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQALPMQYMQ-TRPITSAPSQS 119

Query: 463 NTQ--PLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQLIP-------AGGQ 311
                P +N M G+ G G P SSSY FAP SY QPQN V+ SSQ+Q I          GQ
Sbjct: 120 QQPALPFNNQMPGLAGGGMPYSSSYIFAPPSYAQPQNNVSSSSQFQPISQVQAHVSVTGQ 179

Query: 310 PWLLSGSQNAPPVSQVQQIGQQLSSATVAVTNVQ-PNSTMLSSSDWQEHTSANGRRYYYN 134
           PW+ SG+Q A   + V Q GQQ SS T   + V  P+ T  SSSDWQEHTS +GRRYY+N
Sbjct: 180 PWVSSGNQGAAVPTPVPQSGQQPSSTTFTDSAVNVPSQTQQSSSDWQEHTSGDGRRYYFN 239

Query: 133 KKTRQSSWEKPLELMTPIE 77
           ++T+QSSWEKPLELMTP+E
Sbjct: 240 RRTKQSSWEKPLELMTPME 258


>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
           gi|548831471|gb|ERM94279.1| hypothetical protein
           AMTR_s00010p00227470 [Amborella trichopoda]
          Length = 985

 Score =  227 bits (579), Expect = 5e-57
 Identities = 134/247 (54%), Positives = 154/247 (62%), Gaps = 17/247 (6%)
 Frame = -3

Query: 766 GSTGPQNFGPPMSMQFHH-VAQQQTQPFISVASQQFRPVGQGISVSNVGIP-XXXXXXXX 593
           G  GPQN+G PMSMQF   V  QQ+QPFIS  SQQFRPVGQGI  SN+G P         
Sbjct: 2   GPGGPQNYGTPMSMQFRPMVPTQQSQPFISAPSQQFRPVGQGIPASNIGSPSPVQAQQAQ 61

Query: 592 XXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQ--PNTQPLSNNMTGVGGM 419
                              PS Q +P+ Y+QP+RP+TSG  Q   N Q ++ +  G+GG 
Sbjct: 62  YALGMQQLPPRPAQTAQVAPSPQTVPLSYIQPNRPMTSGPLQIPQNPQHVNIHPPGLGGP 121

Query: 418 GAPLSSSYTF-APSSYGQPQNGVNFSSQYQ-----LIP-----AGGQPWLLSGSQNAPPV 272
           G  LSSSYTF APSSY  PQN +N SSQYQ      +P     +GGQPWL SGSQ+   +
Sbjct: 122 GTVLSSSYTFTAPSSYVHPQNNINISSQYQPSSQMQVPGVPSGSGGQPWLSSGSQSTTVI 181

Query: 271 SQVQQIGQQLS--SATVAVTNVQPNSTMLSSSDWQEHTSANGRRYYYNKKTRQSSWEKPL 98
             V Q  QQ S  ++T  V   QPN T  SSSDWQEHTSA+GRRYYYNKKTRQSSWEKPL
Sbjct: 182 PPVVQASQQSSFAASTAPVATPQPNPTSQSSSDWQEHTSADGRRYYYNKKTRQSSWEKPL 241

Query: 97  ELMTPIE 77
           ELMTPIE
Sbjct: 242 ELMTPIE 248


>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
           gi|550323102|gb|EEE98334.2| FF domain-containing family
           protein [Populus trichocarpa]
          Length = 1019

 Score =  192 bits (488), Expect = 2e-46
 Identities = 118/258 (45%), Positives = 144/258 (55%), Gaps = 10/258 (3%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVAQQQTQPFISVASQQFRPVGQGI 641
           MA NPQSSG Q  RP +P                     QQ QPFI VASQQFRPVGQG+
Sbjct: 1   MASNPQSSGGQ-FRPMVP--------------------TQQGQPFIQVASQQFRPVGQGM 39

Query: 640 SVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQPN 461
             S+VG+P                           PS+QA+ MPY Q +RP+TS  PQ N
Sbjct: 40  PSSHVGMP--AAQSQHLQFSQPIQQLPPWPNQPGAPSAQALSMPYGQLNRPLTSSQPQQN 97

Query: 460 TQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQY--------QLIPAGGQPW 305
             PLSN+M  VG  G P SS Y FAPSS+G  QN  +   Q+         ++P GGQPW
Sbjct: 98  APPLSNHMHVVGTSGVPNSSPYAFAPSSFGLTQNSASALPQFPPMSQMHAHVVPMGGQPW 157

Query: 304 LLSGSQNAPPVSQVQQ--IGQQLSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRYYYNK 131
           L SGS  A  V  VQ   +   +SS++ +   V  NS   S SDWQEHT+++GRRYYYN+
Sbjct: 158 LSSGSHGASLVPPVQPAVVQPSISSSSDSTVAVSSNSQQ-SLSDWQEHTASDGRRYYYNR 216

Query: 130 KTRQSSWEKPLELMTPIE 77
           +T+QSSW+KP ELMTPIE
Sbjct: 217 RTKQSSWDKPFELMTPIE 234


>ref|XP_007160940.1| hypothetical protein PHAVU_001G029800g [Phaseolus vulgaris]
           gi|561034404|gb|ESW32934.1| hypothetical protein
           PHAVU_001G029800g [Phaseolus vulgaris]
          Length = 1000

 Score =  190 bits (483), Expect = 7e-46
 Identities = 116/233 (49%), Positives = 135/233 (57%), Gaps = 9/233 (3%)
 Frame = -3

Query: 748 NFGPPMSMQFHHVAQ-QQTQPFISVASQQFRPVGQGISVSNVGIPXXXXXXXXXXXXXXX 572
           N   P SMQF  V Q QQ QPF+ + SQQF P G  I  SN G+P               
Sbjct: 3   NNSQPSSMQFRPVIQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQ 62

Query: 571 XXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQPNT-QPLSNNMTGVGGMGAPLSSSY 395
                       PSSQ IPMPY+Q +RP++S  P   +  PLSN+M G+   GA   SSY
Sbjct: 63  LTPRPMQPGHLAPSSQPIPMPYIQTNRPMSSIPPHSQSVPPLSNHMPGLPVSGAAPHSSY 122

Query: 394 TFAPSSYGQPQNGVNFSSQYQ-----LIPAGGQPWLLSGSQNAPPVSQVQQIGQQLSSAT 230
           TF PS YGQ  +  N  +QYQ     L P GGQPWL S SQ+  P + VQ  G Q S AT
Sbjct: 123 TFTPS-YGQQHDNANALAQYQHPPQMLAPPGGQPWLSSASQSVAPSTSVQPAGLQSSGAT 181

Query: 229 V--AVTNVQPNSTMLSSSDWQEHTSANGRRYYYNKKTRQSSWEKPLELMTPIE 77
           +  AVTN    +   S SDWQEHTS +GRRYYYNK+TRQSSWEKPLELM+PIE
Sbjct: 182 LTDAVTNA---TNQHSLSDWQEHTSGDGRRYYYNKRTRQSSWEKPLELMSPIE 231


>ref|XP_007160939.1| hypothetical protein PHAVU_001G029800g [Phaseolus vulgaris]
           gi|561034403|gb|ESW32933.1| hypothetical protein
           PHAVU_001G029800g [Phaseolus vulgaris]
          Length = 887

 Score =  190 bits (483), Expect = 7e-46
 Identities = 116/233 (49%), Positives = 135/233 (57%), Gaps = 9/233 (3%)
 Frame = -3

Query: 748 NFGPPMSMQFHHVAQ-QQTQPFISVASQQFRPVGQGISVSNVGIPXXXXXXXXXXXXXXX 572
           N   P SMQF  V Q QQ QPF+ + SQQF P G  I  SN G+P               
Sbjct: 3   NNSQPSSMQFRPVIQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQ 62

Query: 571 XXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSPQPNT-QPLSNNMTGVGGMGAPLSSSY 395
                       PSSQ IPMPY+Q +RP++S  P   +  PLSN+M G+   GA   SSY
Sbjct: 63  LTPRPMQPGHLAPSSQPIPMPYIQTNRPMSSIPPHSQSVPPLSNHMPGLPVSGAAPHSSY 122

Query: 394 TFAPSSYGQPQNGVNFSSQYQ-----LIPAGGQPWLLSGSQNAPPVSQVQQIGQQLSSAT 230
           TF PS YGQ  +  N  +QYQ     L P GGQPWL S SQ+  P + VQ  G Q S AT
Sbjct: 123 TFTPS-YGQQHDNANALAQYQHPPQMLAPPGGQPWLSSASQSVAPSTSVQPAGLQSSGAT 181

Query: 229 V--AVTNVQPNSTMLSSSDWQEHTSANGRRYYYNKKTRQSSWEKPLELMTPIE 77
           +  AVTN    +   S SDWQEHTS +GRRYYYNK+TRQSSWEKPLELM+PIE
Sbjct: 182 LTDAVTNA---TNQHSLSDWQEHTSGDGRRYYYNKRTRQSSWEKPLELMSPIE 231


>ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [Theobroma cacao]
           gi|508706620|gb|EOX98516.1| Pre-mRNA-processing protein
           40B, putative [Theobroma cacao]
          Length = 1025

 Score =  184 bits (468), Expect = 4e-44
 Identities = 119/261 (45%), Positives = 147/261 (56%), Gaps = 13/261 (4%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGP-QNFGPPMSMQFHHVA-QQQTQPFISVASQQFRPVGQ 647
           MA NPQ SG QP  PPL GS  P +NF PPMS QF  V   QQ Q F+ VA Q F+PV +
Sbjct: 1   MANNPQFSGVQPHPPPLVGSMDPPRNFPPPMSAQFRPVVPSQQPQQFVPVAPQLFQPVAR 60

Query: 646 GISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGS-- 473
           G++V N G                              ++  I +P  QP   ++ G+  
Sbjct: 61  GVTVMNSGFSPQTQQPQFPQVMQQLPARPVQPGHIPP-AALGISLPTAQPHCHVSPGASL 119

Query: 472 PQPNTQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQLIPAGGQPWLLSG 293
           PQPN Q  +N ++G  G  + LSSSY FA SSYGQ     N  +QYQ +P    P +  G
Sbjct: 120 PQPNIQTPNNYVSG--GPASHLSSSYPFASSSYGQASVSQNAMAQYQPMPQLQAPSVSVG 177

Query: 292 -------SQNAPPVSQVQQIGQQ--LSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRYY 140
                  SQ++  V  V QI +Q  +S+ATV   ++QP  T  +S+DW EHTSANGRRYY
Sbjct: 178 GHVGIHVSQSSSSVIPVHQIVEQPSVSTATVPAPSIQPKPTEEASTDWIEHTSANGRRYY 237

Query: 139 YNKKTRQSSWEKPLELMTPIE 77
           YNKKTRQSSWEKPLELMTPIE
Sbjct: 238 YNKKTRQSSWEKPLELMTPIE 258


>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
           gi|223538712|gb|EEF40313.1| protein binding protein,
           putative [Ricinus communis]
          Length = 956

 Score =  182 bits (461), Expect = 2e-43
 Identities = 112/237 (47%), Positives = 136/237 (57%), Gaps = 11/237 (4%)
 Frame = -3

Query: 754 PQNFGPPMSMQFHHVAQ-QQTQPFISVASQQFRPVGQGISVSNVGIPXXXXXXXXXXXXX 578
           P+NF PPM MQF  V   QQ+Q FI VAS  F+PVG+G+ + N G+P             
Sbjct: 4   PRNFVPPMPMQFRPVVPAQQSQQFIPVASPHFQPVGRGVPLMNAGLP-SQPPQSQFPPSV 62

Query: 577 XXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGS--PQPNTQPLSNNMTGVGGMGAPLS 404
                         P SQ I +P  Q +R +TSGS  P P+     N   G+GG GAPLS
Sbjct: 63  QQFPSRPGQPGHGPPPSQVISLPNAQANRHVTSGSSLPPPSVPTSINYAPGLGGPGAPLS 122

Query: 403 SSYTFAPSSYGQPQNGVNFSSQYQ--------LIPAGGQPWLLSGSQNAPPVSQVQQIGQ 248
           SSYTF PSSYGQP    N  SQYQ         IPAGG     S +Q+  PV+ +Q  G+
Sbjct: 123 SSYTFVPSSYGQPPVAANTVSQYQPISQMRPPSIPAGGLAGSSSVNQSITPVTPMQLNGE 182

Query: 247 QLSSATVAVTNVQPNSTMLSSSDWQEHTSANGRRYYYNKKTRQSSWEKPLELMTPIE 77
           Q SS T  +   +PN    ++ DW+EH +ANGRRYYYNK+TRQSSWEKP ELMTPIE
Sbjct: 183 Q-SSVTNDLHPTKPNEE--TTMDWKEHLAANGRRYYYNKRTRQSSWEKPFELMTPIE 236


>gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
          Length = 994

 Score =  179 bits (455), Expect = 1e-42
 Identities = 108/224 (48%), Positives = 136/224 (60%), Gaps = 12/224 (5%)
 Frame = -3

Query: 712 VAQQQTQPFISVASQQFRPVGQGISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXP 533
           V  Q  QPFI  +SQQF+PVGQGI   N+G+                            P
Sbjct: 2   VPNQHGQPFIP-SSQQFQPVGQGIPPPNLGMHPAHSQPVQFSQQMQQYPPRPSQPGHPMP 60

Query: 532 SSQAIPMPYVQPSRPITSGSPQP--NTQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQN 359
           SSQ +PM Y+Q +RPI  G PQ   +  P +N M   G M  P SSSY++APSS+ QPQN
Sbjct: 61  SSQGLPMSYIQ-TRPIAPGPPQSQQHAAPFTNQMPPGGAM--PFSSSYSYAPSSFVQPQN 117

Query: 358 GVNFSSQYQLI--------PAGGQPWLLSGSQNAPPVSQVQQIGQQLSSATVA--VTNVQ 209
             +  SQ+Q +        P  GQPWL SG  +APPV+  QQ+GQ  S+A+ A   TNV 
Sbjct: 118 NASSVSQFQQMSQMQAPTAPGPGQPWLSSGIHSAPPVAPGQQVGQPPSAASSADAATNV- 176

Query: 208 PNSTMLSSSDWQEHTSANGRRYYYNKKTRQSSWEKPLELMTPIE 77
           P++T  SSSDWQEHTS++GRRYYYNK+T+QS W+KP+ELMTPIE
Sbjct: 177 PSTTQQSSSDWQEHTSSDGRRYYYNKRTKQSVWDKPVELMTPIE 220


>ref|XP_002300284.2| hypothetical protein POPTR_0001s29710g [Populus trichocarpa]
           gi|550348497|gb|EEE85089.2| hypothetical protein
           POPTR_0001s29710g [Populus trichocarpa]
          Length = 972

 Score =  178 bits (451), Expect = 3e-42
 Identities = 114/260 (43%), Positives = 144/260 (55%), Gaps = 12/260 (4%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGPQNFGPPMSMQFHHVAQQQTQPFISVASQQFRPVGQGI 641
           MA NPQ SG Q  RP      GP                Q +Q FI V+S  F+PVG+G+
Sbjct: 1   MANNPQFSGMQ-FRP-----VGPV---------------QPSQQFIPVSSPHFQPVGRGV 39

Query: 640 SVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSGSP--Q 467
           +V N G+P                           P  QAIP+P  QP+R + SGSP   
Sbjct: 40  TVMNPGLPPQPPQPQFPHPMQQLPARPNQPSLGPPPP-QAIPLPNAQPNRHVMSGSPLPP 98

Query: 466 PNTQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQL--------IPAGGQ 311
           P+ Q  ++ M G+GG G PLSSSYTFAPSSYGQP    N  +Q+Q         IP GG 
Sbjct: 99  PSVQTPNSYMPGLGGPGVPLSSSYTFAPSSYGQPPVTFNAVTQFQPMPQMHVQPIPTGGH 158

Query: 310 PWLLSGSQNAPPVSQVQQIGQQLSSAT--VAVTNVQPNSTMLSSSDWQEHTSANGRRYYY 137
           P   S + N  PV+ +Q+ G+Q S  T  V  T++QP  T  + ++W+EHTSANGRR+YY
Sbjct: 159 P-ASSMNHNTAPVTPIQRNGEQSSVTTTNVRATSIQPKPTEEALTEWKEHTSANGRRFYY 217

Query: 136 NKKTRQSSWEKPLELMTPIE 77
           NK+TRQSSWEKP EL+TPIE
Sbjct: 218 NKRTRQSSWEKPYELLTPIE 237


>ref|XP_006595998.1| PREDICTED: pre-mRNA-processing protein 40A-like [Glycine max]
          Length = 997

 Score =  175 bits (443), Expect = 3e-41
 Identities = 111/227 (48%), Positives = 131/227 (57%), Gaps = 10/227 (4%)
 Frame = -3

Query: 727 MQFHHVAQ-QQTQPFISVASQQFRPVGQGISVSNVGIPXXXXXXXXXXXXXXXXXXXXXX 551
           +QF  V Q QQ QPF+ + SQQF P G  I  SN G+P                      
Sbjct: 5   LQFRPVTQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQLTQRPMQ 64

Query: 550 XXXXXPSSQAIPMPYVQPSRPITSGSP--QPNTQPLSNNMTGVG-GMGAPLSSSYTFAPS 380
                PSSQAIPM Y+Q +RP+TS  P  Q N  PLSN+M G+   + AP SS +T    
Sbjct: 65  PGHPAPSSQAIPMQYIQTNRPLTSIPPHSQQNVPPLSNHMPGLAVSVAAPHSSYFTL--- 121

Query: 379 SYGQPQNGVNFSSQYQ-----LIPAGGQPWLLSGSQNAPPVSQVQQIGQQLSSATVAVTN 215
           SYGQ Q+  N  +QYQ       P  GQPW  S SQ+A  V+ VQ  G Q S AT   T+
Sbjct: 122 SYGQQQDNANALAQYQHPPQMFAPPSGQPWPSSASQSAVAVTSVQPAGVQSSGATS--TD 179

Query: 214 VQPNSTMLSS-SDWQEHTSANGRRYYYNKKTRQSSWEKPLELMTPIE 77
              N+T   S SDWQEHTSA+GRRYYYNK+TRQSSWEKPLELM+PIE
Sbjct: 180 AVINATNQQSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIE 226


>ref|XP_006606005.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Glycine
           max] gi|571567022|ref|XP_006606006.1| PREDICTED:
           pre-mRNA-processing protein 40A-like isoform X2 [Glycine
           max]
          Length = 1008

 Score =  171 bits (432), Expect = 6e-40
 Identities = 117/263 (44%), Positives = 143/263 (54%), Gaps = 15/263 (5%)
 Frame = -3

Query: 820 MAGNPQSSGAQPLRPPLPGSTGP-QNFGPPMSMQFHH-VAQQQTQPFISVASQ--QFRPV 653
           M+ NPQ  G QPLRPP+ GS  P +NF PPM +QF   V  QQ+Q FIS+ SQ  Q +PV
Sbjct: 1   MSNNPQYPGLQPLRPPIAGSLDPPRNFVPPMPVQFRPAVPTQQSQQFISMPSQHYQHQPV 60

Query: 652 GQG-ISVSNVGIPXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSQAIPMPYVQPSRPITSG 476
           G G + +  VGIP                             SQAIPMP  +P+  I S 
Sbjct: 61  GPGGVPLIGVGIPPQNQQPQFSQPIQQLPPRPSPQLPPP---SQAIPMPVARPNMHIPSE 117

Query: 475 S------PQPNTQPLSNNMTGVGGMGAPLSSSYTFAPSSYGQPQNGVNFSSQYQLIPAGG 314
           S       Q ++Q  +    G+GG G PLSSSYTFAPS+YGQ Q   N + Q+Q +P   
Sbjct: 118 SMMQQSDSQAHSQAPNGYTPGLGGPGMPLSSSYTFAPSTYGQVQANFNSTGQFQPVP--- 174

Query: 313 QPWLLSGS--QNAPPVSQVQQIGQQLSSATVA--VTNVQPNSTMLSSSDWQEHTSANGRR 146
           Q   L+GS  Q+    + +Q  G Q    TV    T  QP  T    +DW EHTSA GR 
Sbjct: 175 QIHALTGSSSQSITTGATLQSNGGQPLVTTVMPLATIAQPQLTKNGPTDWIEHTSATGRT 234

Query: 145 YYYNKKTRQSSWEKPLELMTPIE 77
           +YYNKKT+ SSWEKP ELMTPIE
Sbjct: 235 FYYNKKTKVSSWEKPFELMTPIE 257