BLASTX nr result
ID: Akebia24_contig00003343
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00003343
(756 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU45801.1| hypothetical protein MIMGU_mgv1a020037mg, partial... 196 1e-47
ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi... 126 7e-27
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera] 126 9e-27
ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containi... 124 4e-26
ref|XP_007023277.1| Pentatricopeptide repeat superfamily protein... 123 6e-26
ref|XP_004233586.1| PREDICTED: pentatricopeptide repeat-containi... 121 2e-25
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen... 121 2e-25
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi... 121 2e-25
ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat... 121 3e-25
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat... 121 3e-25
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ... 120 4e-25
ref|XP_007029178.1| Pentatricopeptide repeat (PPR) superfamily p... 120 5e-25
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t... 119 1e-24
ref|XP_004951868.1| PREDICTED: pentatricopeptide repeat-containi... 118 2e-24
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc... 118 2e-24
ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [S... 118 2e-24
ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containi... 118 2e-24
ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat... 117 4e-24
ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containi... 117 4e-24
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,... 117 4e-24
>gb|EYU45801.1| hypothetical protein MIMGU_mgv1a020037mg, partial [Mimulus
guttatus]
Length = 522
Score = 196 bits (497), Expect = 1e-47
Identities = 104/195 (53%), Positives = 133/195 (68%), Gaps = 2/195 (1%)
Frame = -2
Query: 587 SISTSNGVGCVSENTNWVSENKLFQKYPRLLSLEHQCK-SLNQLIQILSYVFVSGLHRNP 411
+I+ S+ S ++ WV N+LFQ++ RL LE C+ S N + +LSYVFVSGLHRNP
Sbjct: 1 TINFSSQTNSSSSSSTWVHHNQLFQRHTRLKLLEETCRRSSNHIKHLLSYVFVSGLHRNP 60
Query: 410 FVMSRVLYSCAVGLENEDCGLKL-EFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFH 234
FVMSR+LY + E + EFGIR+F+QI++PN F+WNTMIR F+ D I
Sbjct: 61 FVMSRLLYLTLIQSERTSAESDISEFGIRVFDQIEKPNTFSWNTMIRFFSARD-PITASD 119
Query: 233 YYIEMLRRELLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYL 54
YYI+ML RE++PDK+TFPFLLQAC + DL KQVH H +K F NLFV+NS+L VYL
Sbjct: 120 YYIKMLSREMVPDKYTFPFLLQACGTISDLVSVKQVHCHVLKLHFADNLFVENSLLTVYL 179
Query: 53 ICGSVVDARRVFDEM 9
C S DA +VFDEM
Sbjct: 180 ACNSAADAWQVFDEM 194
>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 126 bits (317), Expect = 7e-27
Identities = 68/168 (40%), Positives = 98/168 (58%)
Frame = -2
Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
PR L +C S++QL QI + + VS + + SR+L CA+ + L + +R
Sbjct: 27 PRFSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGD-----LSYALR 81
Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
+FN EPN F WNT+IRA A+S N Y++M R +++P K TFPFLL+AC +
Sbjct: 82 LFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQS 141
Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
L QVH H +KFG ++NL V N ++ Y + V +ARRVFDE+ E
Sbjct: 142 LQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSE 189
Score = 64.7 bits (156), Expect = 3e-08
Identities = 40/169 (23%), Positives = 85/169 (50%)
Frame = -2
Query: 509 YPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGI 330
+P LL +SL IQ+ ++V GL N V++ ++ + +V + +
Sbjct: 129 FPFLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNAR------- 181
Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
R+F+++ E ++ W TMI +A + S + +M+ L P+ T +L AC +
Sbjct: 182 RVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQSG 241
Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
L L +++H + G + + + +++H+Y G+++ A+++FD + E
Sbjct: 242 CLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDTISE 290
>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 126 bits (316), Expect = 9e-27
Identities = 68/168 (40%), Positives = 98/168 (58%)
Frame = -2
Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
PR L +C S++QL QI + + VS + + SR+L CA+ + L + +R
Sbjct: 29 PRXSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGD-----LSYALR 83
Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
+FN EPN F WNT+IRA A+S N Y++M R +++P K TFPFLL+AC +
Sbjct: 84 LFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQS 143
Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
L QVH H +KFG ++NL V N ++ Y + V +ARRVFDE+ E
Sbjct: 144 LQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSE 191
Score = 64.7 bits (156), Expect = 3e-08
Identities = 40/169 (23%), Positives = 85/169 (50%)
Frame = -2
Query: 509 YPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGI 330
+P LL +SL IQ+ ++V GL N V++ ++ + +V + +
Sbjct: 131 FPFLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNAR------- 183
Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
R+F+++ E ++ W TMI +A + S + +M+ L P+ T +L AC +
Sbjct: 184 RVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQSG 243
Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
L L +++H + G + + + +++H+Y G+++ A+++FD + E
Sbjct: 244 CLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDXISE 292
>ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Cicer arietinum]
Length = 523
Score = 124 bits (311), Expect = 4e-26
Identities = 63/165 (38%), Positives = 99/165 (60%)
Frame = -2
Query: 503 RLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRI 324
R L L +CK++NQL Q + VF +GL N F +SRVL C+ + L + R+
Sbjct: 7 RCLVLLEKCKNMNQLKQAHAQVFTTGLENNTFALSRVLAFCSSHSHHHG---SLAYAFRV 63
Query: 323 FNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDL 144
F +I +P + +NT+I+AF + N H +++ML++ L PD +T P++L+AC + D
Sbjct: 64 FERIHDPTVCIYNTIIKAFLLNGKFNNTLHVFVKMLQKGLRPDNYTVPYVLKACAALHDC 123
Query: 143 GLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
L K VH + K G ++FV NS++ +Y++ G VV AR VFDE+
Sbjct: 124 SLGKLVHGYGSKLGLVFDIFVGNSLMSMYVVFGDVVAARYVFDEI 168
>ref|XP_007023277.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508778643|gb|EOY25899.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 723
Score = 123 bits (309), Expect = 6e-26
Identities = 62/162 (38%), Positives = 96/162 (59%), Gaps = 1/162 (0%)
Frame = -2
Query: 497 LSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFN 318
L L CKS++QL QI SGL R P ++++ C + + +++FN
Sbjct: 21 LFLIENCKSMDQLQQIHCQTVKSGLIRKPISQNKLISFCCTNESGD-----MNHALQMFN 75
Query: 317 QIDEP-NIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLG 141
QI EP ++F WNTMI+ ++ D + Y+ ML++++ PD +TFPFLL+ + L
Sbjct: 76 QISEPKSVFLWNTMIKGYSRVDCPKHGISMYLNMLKQDVKPDDYTFPFLLKGFDRDVGLS 135
Query: 140 LAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
K++H H VKFGF N+FVQN+++H+Y +CG + AR VFD
Sbjct: 136 CGKKLHGHAVKFGFGSNVFVQNALIHMYSLCGQMEMARAVFD 177
Score = 62.0 bits (149), Expect = 2e-07
Identities = 38/140 (27%), Positives = 67/140 (47%)
Frame = -2
Query: 428 GLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFNQIDEPNIFTWNTMIRAFATSDNS 249
G N FV + +++ ++ CG ++E +F+ + ++ TWN +I +
Sbjct: 148 GFGSNVFVQNALIHMYSL------CG-QMEMARAVFDVSCKRDVITWNVIITGYNRMKQY 200
Query: 248 INPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSV 69
+ EM R ++P T LL AC DL + K+VH + K NL ++N++
Sbjct: 201 DETNKLFDEMERNGMVPTSVTLVSLLSACSKLKDLEVGKRVHKYIQKCKVESNLTLENAL 260
Query: 68 LHVYLICGSVVDARRVFDEM 9
+ +Y CG + A R+FD M
Sbjct: 261 MDMYAACGEMDVAVRIFDRM 280
>ref|XP_004233586.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Solanum lycopersicum]
Length = 477
Score = 121 bits (304), Expect = 2e-25
Identities = 66/168 (39%), Positives = 99/168 (58%)
Frame = -2
Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
P L L QC SL+QL QI + + V + F SR+L A+ L + +R
Sbjct: 30 PHLSLLADQCTSLHQLKQIHAQMIVRARIHDNFAASRLLSFSALSQSGS-----LSYAVR 84
Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
+F+ I+EPN F WNT+IRA A S N +Y++M RR + P K TFPF+L+AC +
Sbjct: 85 LFDSINEPNSFMWNTLIRAQAGSSNPRQALLFYVKMRRRCVAPGKHTFPFVLKACSNVMC 144
Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
+ +++QVH H++KFG +++L V N ++ Y + + DAR VFDE+ E
Sbjct: 145 IYVSRQVHCHSIKFGLDLDLHVVNGLIRAYSVSRVLRDAREVFDEVPE 192
Score = 60.1 bits (144), Expect = 8e-07
Identities = 29/108 (26%), Positives = 57/108 (52%)
Frame = -2
Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
+F+++ E N+ W TMI FA +D + + ML + P+ T +L AC +
Sbjct: 186 VFDEVPERNLSIWTTMICGFAQNDRYADAIQLFECMLEDGMAPNGATLVSVLSACAESGS 245
Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
L L +Q+H + + G + + + +++++Y G++V A++ F M E
Sbjct: 246 LQLGEQIHAYVEENGIELGVILGTALVNMYAKNGAIVKAKKCFSSMRE 293
>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 121 bits (304), Expect = 2e-25
Identities = 66/200 (33%), Positives = 106/200 (53%)
Frame = -2
Query: 614 IHTPNHFSTSISTSNGVGCVSENTNWVSENKLFQKYPRLLSLEHQCKSLNQLIQILSYVF 435
+ P +T +TS+ + S T+ L+SL C+S++QL Q+
Sbjct: 16 VKKPKQMTTIAATSSALKSFSPPTH------------PLISLLETCESMDQLQQVHCQAI 63
Query: 434 VSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFNQIDEPNIFTWNTMIRAFATSD 255
GL+ NP + +RV+ C + ++ R+F++I EPN+F WNTMIR ++ D
Sbjct: 64 KKGLNANPVLQNRVMTFCCTHEYGD-----FQYARRLFDEIPEPNLFIWNTMIRGYSRLD 118
Query: 254 NSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQN 75
Y+EMLRR + PD++TFPFL + + L +Q+H H +K G N+FV
Sbjct: 119 FPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHT 178
Query: 74 SVLHVYLICGSVVDARRVFD 15
+++ +YL+CG + AR VFD
Sbjct: 179 ALVQMYLLCGQLDTARGVFD 198
Score = 58.2 bits (139), Expect = 3e-06
Identities = 42/171 (24%), Positives = 79/171 (46%)
Frame = -2
Query: 521 LFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKL 342
LF+ + R ++LE+ Q+ +V GL N FV + ++ + CG +L
Sbjct: 145 LFKGFTRDIALEYGR-------QLHGHVLKHGLQYNVFVHTALVQMYLL------CG-QL 190
Query: 341 EFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQAC 162
+ +F+ + ++ TWN +I A+ ++ M +++LP T +L AC
Sbjct: 191 DTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSAC 250
Query: 161 RSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
DL K+VH++ NL ++N+++ +Y CG + A +F M
Sbjct: 251 SKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 301
>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 121 bits (304), Expect = 2e-25
Identities = 62/165 (37%), Positives = 94/165 (56%)
Frame = -2
Query: 503 RLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRI 324
R L L +CK++N L Q + VF +GL N F +SR+L C+ + L + R+
Sbjct: 7 RCLVLLEKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGS-----LTYACRV 61
Query: 323 FNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDL 144
F +I P + NT+I+ F + N FH + +ML L PD +T P++L+AC + D
Sbjct: 62 FERIHHPTLCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALRDC 121
Query: 143 GLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
L K VH ++ K G ++FV NS++ +Y +CG V+ AR VFDEM
Sbjct: 122 SLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEM 166
>ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Citrus sinensis]
Length = 741
Score = 121 bits (303), Expect = 3e-25
Identities = 64/178 (35%), Positives = 107/178 (60%)
Frame = -2
Query: 548 NTNWVSENKLFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGL 369
N++ + L Q+ P L+SL C+S++QL QI S GL NP V ++++ C
Sbjct: 25 NSSISPPSTLTQETP-LISLIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCS-- 81
Query: 368 ENEDCGLKLEFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKF 189
E D +++ ++F +I P++F WNTMI+ ++ D+ N Y++ML+ ++ PD +
Sbjct: 82 EKGD----MKYACKVFRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNY 137
Query: 188 TFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
TFPFLL+ + + K++H H VKFGF+ ++FVQN+++ Y +CG V AR +FD
Sbjct: 138 TFPFLLKGFTRDIAVEFGKELHCHVVKFGFDSSVFVQNALISTYCLCGEVDMARGIFD 195
>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 121 bits (303), Expect = 3e-25
Identities = 60/162 (37%), Positives = 94/162 (58%)
Frame = -2
Query: 500 LLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIF 321
L+SL C+S++QL Q+ GL+ NP + +RV+ C + ++ R+F
Sbjct: 21 LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD-----FQYARRLF 75
Query: 320 NQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLG 141
++I EPN+F WNTMIR ++ D Y+EMLRR + PD++TFPFL + + L
Sbjct: 76 DEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALE 135
Query: 140 LAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
+Q+H H +K G N+FV +++ +YL+CG + AR VFD
Sbjct: 136 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFD 177
Score = 58.2 bits (139), Expect = 3e-06
Identities = 42/171 (24%), Positives = 79/171 (46%)
Frame = -2
Query: 521 LFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKL 342
LF+ + R ++LE+ Q+ +V GL N FV + ++ + CG +L
Sbjct: 124 LFKGFTRDIALEYGR-------QLHGHVLKHGLQYNVFVHTALVQMYLL------CG-QL 169
Query: 341 EFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQAC 162
+ +F+ + ++ TWN +I A+ ++ M +++LP T +L AC
Sbjct: 170 DTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSAC 229
Query: 161 RSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
DL K+VH++ NL ++N+++ +Y CG + A +F M
Sbjct: 230 SKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 280
>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338275|gb|EFH68692.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 741
Score = 120 bits (302), Expect = 4e-25
Identities = 59/161 (36%), Positives = 94/161 (58%)
Frame = -2
Query: 497 LSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFN 318
LSL H CK+L L I + + +GLH + +S++L C + + L + I +F
Sbjct: 37 LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDG----LPYAISVFE 92
Query: 317 QIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGL 138
I EPN+ WNTM R A S + ++ Y+ M+ LLP+ +TFPFLL++C +
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKE 152
Query: 137 AKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
+Q+H H +K G++++LFV S++ VY+ G + DAR+VFD
Sbjct: 153 GQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFD 193
Score = 66.6 bits (161), Expect = 9e-09
Identities = 32/113 (28%), Positives = 61/113 (53%)
Frame = -2
Query: 344 LEFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQA 165
+E ++F++I ++ +WN MI +A + N + EM++ + PD+ T ++ A
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275
Query: 164 CRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEML 6
C + + L +QVH+ GF NL + NS++ +Y CG + A +F+ +L
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLL 328
>ref|XP_007029178.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508717783|gb|EOY09680.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 626
Score = 120 bits (301), Expect = 5e-25
Identities = 66/186 (35%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
Frame = -2
Query: 557 VSENTNWVSE--NKLFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYS 384
+S N++ S+ N L K P+LL LE CK+L+QL I ++ + + + F SR++
Sbjct: 3 ISSNSSSSSKVLNTLRLKNPKLLLLE-SCKNLSQLKIIHGHMIRTHIIFDIFAASRLISL 61
Query: 383 CAVGLENEDCGLKL-EFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRE 207
C + G L ++ +IF+QI+ PN+F +N +I+ F+ N FH+Y ++LR
Sbjct: 62 CT----DPSFGTALLDYAFKIFSQIETPNLFIFNALIKGFSACQNPHQSFHFYTQLLRAN 117
Query: 206 LLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDAR 27
+LPD +FPFL++AC L + Q H +K GF N++VQNS++H+Y CG + A
Sbjct: 118 ILPDNLSFPFLVRACAQLESLDMGIQAHGQIIKHGFESNVYVQNSLVHMYSTCGDIKAAN 177
Query: 26 RVFDEM 9
+F M
Sbjct: 178 AIFQRM 183
>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 525
Score = 119 bits (297), Expect = 1e-24
Identities = 59/165 (35%), Positives = 96/165 (58%)
Frame = -2
Query: 503 RLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRI 324
R L L +CKS+ L Q + VF +GL N F +SRVL C+ + + L + R+
Sbjct: 7 RCLVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHE---SLTYACRV 63
Query: 323 FNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDL 144
F QI P + +NT+I+AF ++ + +++ML+ EL PD +T P++L+AC + D
Sbjct: 64 FEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDC 123
Query: 143 GLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
K +H ++ K G +++V NS++ +Y + G VV AR VFDE+
Sbjct: 124 SFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEI 168
>ref|XP_004951868.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Setaria italica]
Length = 473
Score = 118 bits (296), Expect = 2e-24
Identities = 68/179 (37%), Positives = 105/179 (58%), Gaps = 2/179 (1%)
Frame = -2
Query: 539 WVSENKLFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENE 360
W + N LF+++ RLL L SL L+ +LSY VSGL RNPFV SR+L + +
Sbjct: 13 WATANALFRRHRRLLPLLLPAASLRDLLPVLSYCLVSGLARNPFVASRLLLTSS------ 66
Query: 359 DCGLKLEFGIRIFNQIDEPNI--FTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFT 186
GL L F + + + + ++ F++N++IRA S+ + +M RR + D +T
Sbjct: 67 --GLSLPFSLLLLSHLPASSLSSFSFNSLIRA----SPSVLALRLFDQMRRRGVPADPYT 120
Query: 185 FPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
PFL++AC + D L K +H V+ G+ +LF Q +++++Y CGSVV ARRVF+EM
Sbjct: 121 LPFLIRACNGS-DPPLCKSLHGQGVRLGYGCHLFTQTALMNMYFACGSVVAARRVFEEM 178
>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 118 bits (296), Expect = 2e-24
Identities = 56/162 (34%), Positives = 96/162 (59%)
Frame = -2
Query: 497 LSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFN 318
LSL H CK+L L I + + +GLH + +S+++ C + + L + I +F
Sbjct: 6 LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDG----LPYAISVFE 61
Query: 317 QIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGL 138
I EPN+ WNTM R A S + ++ + Y+ M+ LLP+ +TFPFLL++C +
Sbjct: 62 TIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFRE 121
Query: 137 AKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDE 12
+Q+H H +K G++++L+V S++ +Y+ G + DAR+VFD+
Sbjct: 122 GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQ 163
Score = 66.2 bits (160), Expect = 1e-08
Identities = 30/105 (28%), Positives = 59/105 (56%)
Frame = -2
Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
++F++I ++ +WN MI +A + N+ + EM++ + PD+ T ++ AC +
Sbjct: 190 KMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSA 249
Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
+ L +QVH+ GF NL + N+++ +Y+ CG V A +F+
Sbjct: 250 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFE 294
>ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein
SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 118 bits (296), Expect = 2e-24
Identities = 58/147 (39%), Positives = 90/147 (61%)
Frame = -2
Query: 446 SYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFNQIDEPNIFTWNTMIRAF 267
+++ VSGLH + MS+V+ S A L+ D L F ++F QI+ P F WNT++R
Sbjct: 332 AHLVVSGLHNCQYAMSKVIRSYA--LQQSD----LVFAHKVFEQIESPTTFLWNTLLRGL 385
Query: 266 ATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINL 87
A SD + +Y + + + PD TFPF+L+AC + +Q+H+H +K GF +++
Sbjct: 386 AQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDI 445
Query: 86 FVQNSVLHVYLICGSVVDARRVFDEML 6
FV NS++H+Y CG +V AR +FDEML
Sbjct: 446 FVSNSLIHLYAACGDLVCARSIFDEML 472
Score = 60.5 bits (145), Expect = 6e-07
Identities = 29/109 (26%), Positives = 60/109 (55%)
Frame = -2
Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
+IF+QI ++ +W++MI A++ + + + + +M R ++ PD +L AC
Sbjct: 598 KIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLG 657
Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
L L K +H++ + + ++NS++ ++ CG + +A +VF EM E
Sbjct: 658 ALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEE 706
>ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 118 bits (296), Expect = 2e-24
Identities = 66/168 (39%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Frame = -2
Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
P L L CKS Q +QI + V+GLH F +SR++ ++ L ++D L+
Sbjct: 10 PSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSL-LGSKD---GLDHSRL 65
Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLP-DKFTFPFLLQACRSNF 150
+F+QID PN+F WNTMIR ++ SDN Y+ M+ + + P + FTFPFLL +C
Sbjct: 66 LFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLS 125
Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEML 6
L +VH+H +K GF +LFV+N+++H+Y + G++ AR +FDE L
Sbjct: 126 SLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESL 173
>ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Solanum tuberosum]
Length = 752
Score = 117 bits (293), Expect = 4e-24
Identities = 62/162 (38%), Positives = 94/162 (58%)
Frame = -2
Query: 500 LLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIF 321
L SL +CKS++QL QI S + GL +P + S ++ C+ N + G +++ +F
Sbjct: 50 LQSLIERCKSMDQLRQIHSVIIQKGLISDPKLCSNIIAFCS----NNELG-DMKYARSVF 104
Query: 320 NQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLG 141
+ + E +F WNTMI+ ++ ++ N Y EML + PD +TFPFLL+ L
Sbjct: 105 DIMPERGVFIWNTMIKGYSRENSPQNGVSIYREMLNNNVQPDNYTFPFLLKGFTREVSLK 164
Query: 140 LAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
L K +H H KFGF +N FV ++++HVY +CG V AR VFD
Sbjct: 165 LGKSMHAHVCKFGFELNEFVHHALIHVYGLCGQVDMARGVFD 206
>ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Solanum tuberosum]
Length = 477
Score = 117 bits (293), Expect = 4e-24
Identities = 64/168 (38%), Positives = 98/168 (58%)
Frame = -2
Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
P L L QC SL+QL QI + + +S + + SR+L A+ L + +R
Sbjct: 30 PHLSLLADQCTSLHQLKQIHAQMIISARIHDNYAASRLLSFSALSESGS-----LSYAVR 84
Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
+F+ I+EPN F WNT+IRA A S N Y++M R + P K TFPF+L+AC +
Sbjct: 85 LFDSINEPNSFMWNTLIRAQAGSSNPRQALLLYVKMQRLCVAPGKHTFPFVLKACSNVMC 144
Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
+ +++QVH H +KFG +++L V N ++ Y + + DAR+VFDE+ E
Sbjct: 145 IYVSRQVHCHAIKFGLDLDLHVVNGLIRAYSVSRVLRDARQVFDEVPE 192
Score = 60.8 bits (146), Expect = 5e-07
Identities = 29/109 (26%), Positives = 58/109 (53%)
Frame = -2
Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
++F+++ E N+ W TMI FA +D + + ML + P+ T +L AC +
Sbjct: 185 QVFDEVPERNLSIWTTMICGFAQNDRYGDVIQLFERMLEDGMTPNGATLASVLSACAQSG 244
Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
L L +Q+H + + G + + + +++++Y G++V+A + F M E
Sbjct: 245 SLQLGEQIHAYMEENGMELGVILGTALVNMYAKNGAIVEANKCFSSMRE 293
>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 413
Score = 117 bits (293), Expect = 4e-24
Identities = 61/166 (36%), Positives = 97/166 (58%)
Frame = -2
Query: 500 LLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIF 321
++ + +C S+ QL QI + + ++ + F SR+L CA+ + + + I++F
Sbjct: 52 IMDMVDKCTSMTQLKQIHAQMILTSRISDHFAASRLLSFCALSNSRD-----INYAIKLF 106
Query: 320 NQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLG 141
I +PNIF WNT+IRA A S N +YI+MLR + P+K+TFPFLL+ C S +
Sbjct: 107 KSIQDPNIFMWNTIIRALANSSNPDQALFFYIQMLRLGVCPNKYTFPFLLKGC-SFCSIQ 165
Query: 140 LAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
KQ+H H +KFG +++L V N ++ VY I + DA ++F E E
Sbjct: 166 SCKQIHTHVLKFGSDLDLHVVNRLVRVYSIFSDLTDAWKLFGEFPE 211