BLASTX nr result

ID: Akebia24_contig00003343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00003343
         (756 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU45801.1| hypothetical protein MIMGU_mgv1a020037mg, partial...   196   1e-47
ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...   126   7e-27
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]   126   9e-27
ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containi...   124   4e-26
ref|XP_007023277.1| Pentatricopeptide repeat superfamily protein...   123   6e-26
ref|XP_004233586.1| PREDICTED: pentatricopeptide repeat-containi...   121   2e-25
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   121   2e-25
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...   121   2e-25
ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat...   121   3e-25
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat...   121   3e-25
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ...   120   4e-25
ref|XP_007029178.1| Pentatricopeptide repeat (PPR) superfamily p...   120   5e-25
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t...   119   1e-24
ref|XP_004951868.1| PREDICTED: pentatricopeptide repeat-containi...   118   2e-24
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc...   118   2e-24
ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [S...   118   2e-24
ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containi...   118   2e-24
ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat...   117   4e-24
ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containi...   117   4e-24
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...   117   4e-24

>gb|EYU45801.1| hypothetical protein MIMGU_mgv1a020037mg, partial [Mimulus
           guttatus]
          Length = 522

 Score =  196 bits (497), Expect = 1e-47
 Identities = 104/195 (53%), Positives = 133/195 (68%), Gaps = 2/195 (1%)
 Frame = -2

Query: 587 SISTSNGVGCVSENTNWVSENKLFQKYPRLLSLEHQCK-SLNQLIQILSYVFVSGLHRNP 411
           +I+ S+     S ++ WV  N+LFQ++ RL  LE  C+ S N +  +LSYVFVSGLHRNP
Sbjct: 1   TINFSSQTNSSSSSSTWVHHNQLFQRHTRLKLLEETCRRSSNHIKHLLSYVFVSGLHRNP 60

Query: 410 FVMSRVLYSCAVGLENEDCGLKL-EFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFH 234
           FVMSR+LY   +  E       + EFGIR+F+QI++PN F+WNTMIR F+  D  I    
Sbjct: 61  FVMSRLLYLTLIQSERTSAESDISEFGIRVFDQIEKPNTFSWNTMIRFFSARD-PITASD 119

Query: 233 YYIEMLRRELLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYL 54
           YYI+ML RE++PDK+TFPFLLQAC +  DL   KQVH H +K  F  NLFV+NS+L VYL
Sbjct: 120 YYIKMLSREMVPDKYTFPFLLQACGTISDLVSVKQVHCHVLKLHFADNLFVENSLLTVYL 179

Query: 53  ICGSVVDARRVFDEM 9
            C S  DA +VFDEM
Sbjct: 180 ACNSAADAWQVFDEM 194


>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score =  126 bits (317), Expect = 7e-27
 Identities = 68/168 (40%), Positives = 98/168 (58%)
 Frame = -2

Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
           PR   L  +C S++QL QI + + VS    + +  SR+L  CA+    +     L + +R
Sbjct: 27  PRFSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGD-----LSYALR 81

Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
           +FN   EPN F WNT+IRA A+S N       Y++M R +++P K TFPFLL+AC +   
Sbjct: 82  LFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQS 141

Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
           L    QVH H +KFG ++NL V N ++  Y +   V +ARRVFDE+ E
Sbjct: 142 LQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSE 189



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 40/169 (23%), Positives = 85/169 (50%)
 Frame = -2

Query: 509 YPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGI 330
           +P LL      +SL   IQ+ ++V   GL  N  V++ ++ + +V  +  +         
Sbjct: 129 FPFLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNAR------- 181

Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
           R+F+++ E ++  W TMI  +A +  S      + +M+   L P+  T   +L AC  + 
Sbjct: 182 RVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQSG 241

Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
            L L +++H    + G  + + +  +++H+Y   G+++ A+++FD + E
Sbjct: 242 CLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDTISE 290


>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
          Length = 476

 Score =  126 bits (316), Expect = 9e-27
 Identities = 68/168 (40%), Positives = 98/168 (58%)
 Frame = -2

Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
           PR   L  +C S++QL QI + + VS    + +  SR+L  CA+    +     L + +R
Sbjct: 29  PRXSLLADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGD-----LSYALR 83

Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
           +FN   EPN F WNT+IRA A+S N       Y++M R +++P K TFPFLL+AC +   
Sbjct: 84  LFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKACSNFQS 143

Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
           L    QVH H +KFG ++NL V N ++  Y +   V +ARRVFDE+ E
Sbjct: 144 LQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSE 191



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 40/169 (23%), Positives = 85/169 (50%)
 Frame = -2

Query: 509 YPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGI 330
           +P LL      +SL   IQ+ ++V   GL  N  V++ ++ + +V  +  +         
Sbjct: 131 FPFLLKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNAR------- 183

Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
           R+F+++ E ++  W TMI  +A +  S      + +M+   L P+  T   +L AC  + 
Sbjct: 184 RVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLEPNGATLASVLSACAQSG 243

Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
            L L +++H    + G  + + +  +++H+Y   G+++ A+++FD + E
Sbjct: 244 CLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDXISE 292


>ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cicer arietinum]
          Length = 523

 Score =  124 bits (311), Expect = 4e-26
 Identities = 63/165 (38%), Positives = 99/165 (60%)
 Frame = -2

Query: 503 RLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRI 324
           R L L  +CK++NQL Q  + VF +GL  N F +SRVL  C+    +      L +  R+
Sbjct: 7   RCLVLLEKCKNMNQLKQAHAQVFTTGLENNTFALSRVLAFCSSHSHHHG---SLAYAFRV 63

Query: 323 FNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDL 144
           F +I +P +  +NT+I+AF  +    N  H +++ML++ L PD +T P++L+AC +  D 
Sbjct: 64  FERIHDPTVCIYNTIIKAFLLNGKFNNTLHVFVKMLQKGLRPDNYTVPYVLKACAALHDC 123

Query: 143 GLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
            L K VH +  K G   ++FV NS++ +Y++ G VV AR VFDE+
Sbjct: 124 SLGKLVHGYGSKLGLVFDIFVGNSLMSMYVVFGDVVAARYVFDEI 168


>ref|XP_007023277.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508778643|gb|EOY25899.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 723

 Score =  123 bits (309), Expect = 6e-26
 Identities = 62/162 (38%), Positives = 96/162 (59%), Gaps = 1/162 (0%)
 Frame = -2

Query: 497 LSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFN 318
           L L   CKS++QL QI      SGL R P   ++++  C      +     +   +++FN
Sbjct: 21  LFLIENCKSMDQLQQIHCQTVKSGLIRKPISQNKLISFCCTNESGD-----MNHALQMFN 75

Query: 317 QIDEP-NIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLG 141
           QI EP ++F WNTMI+ ++  D   +    Y+ ML++++ PD +TFPFLL+    +  L 
Sbjct: 76  QISEPKSVFLWNTMIKGYSRVDCPKHGISMYLNMLKQDVKPDDYTFPFLLKGFDRDVGLS 135

Query: 140 LAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
             K++H H VKFGF  N+FVQN+++H+Y +CG +  AR VFD
Sbjct: 136 CGKKLHGHAVKFGFGSNVFVQNALIHMYSLCGQMEMARAVFD 177



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 38/140 (27%), Positives = 67/140 (47%)
 Frame = -2

Query: 428 GLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFNQIDEPNIFTWNTMIRAFATSDNS 249
           G   N FV + +++  ++      CG ++E    +F+   + ++ TWN +I  +      
Sbjct: 148 GFGSNVFVQNALIHMYSL------CG-QMEMARAVFDVSCKRDVITWNVIITGYNRMKQY 200

Query: 248 INPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSV 69
                 + EM R  ++P   T   LL AC    DL + K+VH +  K     NL ++N++
Sbjct: 201 DETNKLFDEMERNGMVPTSVTLVSLLSACSKLKDLEVGKRVHKYIQKCKVESNLTLENAL 260

Query: 68  LHVYLICGSVVDARRVFDEM 9
           + +Y  CG +  A R+FD M
Sbjct: 261 MDMYAACGEMDVAVRIFDRM 280


>ref|XP_004233586.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Solanum lycopersicum]
          Length = 477

 Score =  121 bits (304), Expect = 2e-25
 Identities = 66/168 (39%), Positives = 99/168 (58%)
 Frame = -2

Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
           P L  L  QC SL+QL QI + + V     + F  SR+L   A+          L + +R
Sbjct: 30  PHLSLLADQCTSLHQLKQIHAQMIVRARIHDNFAASRLLSFSALSQSGS-----LSYAVR 84

Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
           +F+ I+EPN F WNT+IRA A S N      +Y++M RR + P K TFPF+L+AC +   
Sbjct: 85  LFDSINEPNSFMWNTLIRAQAGSSNPRQALLFYVKMRRRCVAPGKHTFPFVLKACSNVMC 144

Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
           + +++QVH H++KFG +++L V N ++  Y +   + DAR VFDE+ E
Sbjct: 145 IYVSRQVHCHSIKFGLDLDLHVVNGLIRAYSVSRVLRDAREVFDEVPE 192



 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 29/108 (26%), Positives = 57/108 (52%)
 Frame = -2

Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
           +F+++ E N+  W TMI  FA +D   +    +  ML   + P+  T   +L AC  +  
Sbjct: 186 VFDEVPERNLSIWTTMICGFAQNDRYADAIQLFECMLEDGMAPNGATLVSVLSACAESGS 245

Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
           L L +Q+H +  + G  + + +  +++++Y   G++V A++ F  M E
Sbjct: 246 LQLGEQIHAYVEENGIELGVILGTALVNMYAKNGAIVKAKKCFSSMRE 293


>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  121 bits (304), Expect = 2e-25
 Identities = 66/200 (33%), Positives = 106/200 (53%)
 Frame = -2

Query: 614 IHTPNHFSTSISTSNGVGCVSENTNWVSENKLFQKYPRLLSLEHQCKSLNQLIQILSYVF 435
           +  P   +T  +TS+ +   S  T+             L+SL   C+S++QL Q+     
Sbjct: 16  VKKPKQMTTIAATSSALKSFSPPTH------------PLISLLETCESMDQLQQVHCQAI 63

Query: 434 VSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFNQIDEPNIFTWNTMIRAFATSD 255
             GL+ NP + +RV+  C      +      ++  R+F++I EPN+F WNTMIR ++  D
Sbjct: 64  KKGLNANPVLQNRVMTFCCTHEYGD-----FQYARRLFDEIPEPNLFIWNTMIRGYSRLD 118

Query: 254 NSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQN 75
                   Y+EMLRR + PD++TFPFL +    +  L   +Q+H H +K G   N+FV  
Sbjct: 119 FPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHT 178

Query: 74  SVLHVYLICGSVVDARRVFD 15
           +++ +YL+CG +  AR VFD
Sbjct: 179 ALVQMYLLCGQLDTARGVFD 198



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 42/171 (24%), Positives = 79/171 (46%)
 Frame = -2

Query: 521 LFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKL 342
           LF+ + R ++LE+         Q+  +V   GL  N FV + ++    +      CG +L
Sbjct: 145 LFKGFTRDIALEYGR-------QLHGHVLKHGLQYNVFVHTALVQMYLL------CG-QL 190

Query: 341 EFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQAC 162
           +    +F+   + ++ TWN +I A+            ++ M  +++LP   T   +L AC
Sbjct: 191 DTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSAC 250

Query: 161 RSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
               DL   K+VH++        NL ++N+++ +Y  CG +  A  +F  M
Sbjct: 251 SKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 301


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score =  121 bits (304), Expect = 2e-25
 Identities = 62/165 (37%), Positives = 94/165 (56%)
 Frame = -2

Query: 503 RLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRI 324
           R L L  +CK++N L Q  + VF +GL  N F +SR+L  C+   +       L +  R+
Sbjct: 7   RCLVLLEKCKNVNHLKQAHAQVFTTGLDTNTFALSRLLAFCSHPYQGS-----LTYACRV 61

Query: 323 FNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDL 144
           F +I  P +   NT+I+ F  + N    FH + +ML   L PD +T P++L+AC +  D 
Sbjct: 62  FERIHHPTLCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALRDC 121

Query: 143 GLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
            L K VH ++ K G   ++FV NS++ +Y +CG V+ AR VFDEM
Sbjct: 122 SLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEM 166


>ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Citrus sinensis]
          Length = 741

 Score =  121 bits (303), Expect = 3e-25
 Identities = 64/178 (35%), Positives = 107/178 (60%)
 Frame = -2

Query: 548 NTNWVSENKLFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGL 369
           N++    + L Q+ P L+SL   C+S++QL QI S     GL  NP V ++++  C    
Sbjct: 25  NSSISPPSTLTQETP-LISLIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCS-- 81

Query: 368 ENEDCGLKLEFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKF 189
           E  D    +++  ++F +I  P++F WNTMI+ ++  D+  N    Y++ML+ ++ PD +
Sbjct: 82  EKGD----MKYACKVFRKIPRPSVFLWNTMIKGYSRIDSHKNGVLMYLDMLKSDVRPDNY 137

Query: 188 TFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
           TFPFLL+    +  +   K++H H VKFGF+ ++FVQN+++  Y +CG V  AR +FD
Sbjct: 138 TFPFLLKGFTRDIAVEFGKELHCHVVKFGFDSSVFVQNALISTYCLCGEVDMARGIFD 195


>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  121 bits (303), Expect = 3e-25
 Identities = 60/162 (37%), Positives = 94/162 (58%)
 Frame = -2

Query: 500 LLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIF 321
           L+SL   C+S++QL Q+       GL+ NP + +RV+  C      +      ++  R+F
Sbjct: 21  LISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGD-----FQYARRLF 75

Query: 320 NQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLG 141
           ++I EPN+F WNTMIR ++  D        Y+EMLRR + PD++TFPFL +    +  L 
Sbjct: 76  DEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALE 135

Query: 140 LAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
             +Q+H H +K G   N+FV  +++ +YL+CG +  AR VFD
Sbjct: 136 YGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFD 177



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 42/171 (24%), Positives = 79/171 (46%)
 Frame = -2

Query: 521 LFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKL 342
           LF+ + R ++LE+         Q+  +V   GL  N FV + ++    +      CG +L
Sbjct: 124 LFKGFTRDIALEYGR-------QLHGHVLKHGLQYNVFVHTALVQMYLL------CG-QL 169

Query: 341 EFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQAC 162
           +    +F+   + ++ TWN +I A+            ++ M  +++LP   T   +L AC
Sbjct: 170 DTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSAC 229

Query: 161 RSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
               DL   K+VH++        NL ++N+++ +Y  CG +  A  +F  M
Sbjct: 230 SKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSM 280


>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338275|gb|EFH68692.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  120 bits (302), Expect = 4e-25
 Identities = 59/161 (36%), Positives = 94/161 (58%)
 Frame = -2

Query: 497 LSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFN 318
           LSL H CK+L  L  I + +  +GLH   + +S++L  C +    +     L + I +F 
Sbjct: 37  LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDG----LPYAISVFE 92

Query: 317 QIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGL 138
            I EPN+  WNTM R  A S + ++    Y+ M+   LLP+ +TFPFLL++C  +     
Sbjct: 93  TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKE 152

Query: 137 AKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
            +Q+H H +K G++++LFV  S++ VY+  G + DAR+VFD
Sbjct: 153 GQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFD 193



 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 32/113 (28%), Positives = 61/113 (53%)
 Frame = -2

Query: 344 LEFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQA 165
           +E   ++F++I   ++ +WN MI  +A + N       + EM++  + PD+ T   ++ A
Sbjct: 216 IESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSA 275

Query: 164 CRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEML 6
           C  +  + L +QVH+     GF  NL + NS++ +Y  CG +  A  +F+ +L
Sbjct: 276 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLL 328


>ref|XP_007029178.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508717783|gb|EOY09680.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 626

 Score =  120 bits (301), Expect = 5e-25
 Identities = 66/186 (35%), Positives = 107/186 (57%), Gaps = 3/186 (1%)
 Frame = -2

Query: 557 VSENTNWVSE--NKLFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYS 384
           +S N++  S+  N L  K P+LL LE  CK+L+QL  I  ++  + +  + F  SR++  
Sbjct: 3   ISSNSSSSSKVLNTLRLKNPKLLLLE-SCKNLSQLKIIHGHMIRTHIIFDIFAASRLISL 61

Query: 383 CAVGLENEDCGLKL-EFGIRIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRE 207
           C     +   G  L ++  +IF+QI+ PN+F +N +I+ F+   N    FH+Y ++LR  
Sbjct: 62  CT----DPSFGTALLDYAFKIFSQIETPNLFIFNALIKGFSACQNPHQSFHFYTQLLRAN 117

Query: 206 LLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDAR 27
           +LPD  +FPFL++AC     L +  Q H   +K GF  N++VQNS++H+Y  CG +  A 
Sbjct: 118 ILPDNLSFPFLVRACAQLESLDMGIQAHGQIIKHGFESNVYVQNSLVHMYSTCGDIKAAN 177

Query: 26  RVFDEM 9
            +F  M
Sbjct: 178 AIFQRM 183


>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 525

 Score =  119 bits (297), Expect = 1e-24
 Identities = 59/165 (35%), Positives = 96/165 (58%)
 Frame = -2

Query: 503 RLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRI 324
           R L L  +CKS+  L Q  + VF +GL  N F +SRVL  C+    + +    L +  R+
Sbjct: 7   RCLVLLEKCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHE---SLTYACRV 63

Query: 323 FNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDL 144
           F QI  P +  +NT+I+AF  ++   +    +++ML+ EL PD +T P++L+AC +  D 
Sbjct: 64  FEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDC 123

Query: 143 GLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
              K +H ++ K G   +++V NS++ +Y + G VV AR VFDE+
Sbjct: 124 SFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEI 168


>ref|XP_004951868.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Setaria italica]
          Length = 473

 Score =  118 bits (296), Expect = 2e-24
 Identities = 68/179 (37%), Positives = 105/179 (58%), Gaps = 2/179 (1%)
 Frame = -2

Query: 539 WVSENKLFQKYPRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENE 360
           W + N LF+++ RLL L     SL  L+ +LSY  VSGL RNPFV SR+L + +      
Sbjct: 13  WATANALFRRHRRLLPLLLPAASLRDLLPVLSYCLVSGLARNPFVASRLLLTSS------ 66

Query: 359 DCGLKLEFGIRIFNQIDEPNI--FTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFT 186
             GL L F + + + +   ++  F++N++IRA      S+     + +M RR +  D +T
Sbjct: 67  --GLSLPFSLLLLSHLPASSLSSFSFNSLIRA----SPSVLALRLFDQMRRRGVPADPYT 120

Query: 185 FPFLLQACRSNFDLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEM 9
            PFL++AC  + D  L K +H   V+ G+  +LF Q +++++Y  CGSVV ARRVF+EM
Sbjct: 121 LPFLIRACNGS-DPPLCKSLHGQGVRLGYGCHLFTQTALMNMYFACGSVVAARRVFEEM 178


>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  118 bits (296), Expect = 2e-24
 Identities = 56/162 (34%), Positives = 96/162 (59%)
 Frame = -2

Query: 497 LSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFN 318
           LSL H CK+L  L  I + +  +GLH   + +S+++  C +    +     L + I +F 
Sbjct: 6   LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDG----LPYAISVFE 61

Query: 317 QIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGL 138
            I EPN+  WNTM R  A S + ++  + Y+ M+   LLP+ +TFPFLL++C  +     
Sbjct: 62  TIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFRE 121

Query: 137 AKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDE 12
            +Q+H H +K G++++L+V  S++ +Y+  G + DAR+VFD+
Sbjct: 122 GQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQ 163



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 30/105 (28%), Positives = 59/105 (56%)
 Frame = -2

Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
           ++F++I   ++ +WN MI  +A + N+      + EM++  + PD+ T   ++ AC  + 
Sbjct: 190 KMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSA 249

Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
            + L +QVH+     GF  NL + N+++ +Y+ CG V  A  +F+
Sbjct: 250 SIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFE 294


>ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
           gi|241930650|gb|EES03795.1| hypothetical protein
           SORBIDRAFT_03g037910 [Sorghum bicolor]
          Length = 894

 Score =  118 bits (296), Expect = 2e-24
 Identities = 58/147 (39%), Positives = 90/147 (61%)
 Frame = -2

Query: 446 SYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIFNQIDEPNIFTWNTMIRAF 267
           +++ VSGLH   + MS+V+ S A  L+  D    L F  ++F QI+ P  F WNT++R  
Sbjct: 332 AHLVVSGLHNCQYAMSKVIRSYA--LQQSD----LVFAHKVFEQIESPTTFLWNTLLRGL 385

Query: 266 ATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLGLAKQVHNHTVKFGFNINL 87
           A SD   +   +Y +   + + PD  TFPF+L+AC   +     +Q+H+H +K GF +++
Sbjct: 386 AQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDI 445

Query: 86  FVQNSVLHVYLICGSVVDARRVFDEML 6
           FV NS++H+Y  CG +V AR +FDEML
Sbjct: 446 FVSNSLIHLYAACGDLVCARSIFDEML 472



 Score = 60.5 bits (145), Expect = 6e-07
 Identities = 29/109 (26%), Positives = 60/109 (55%)
 Frame = -2

Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
           +IF+QI   ++ +W++MI A++ + +  +    + +M R ++ PD      +L AC    
Sbjct: 598 KIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLG 657

Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
            L L K +H++  +     +  ++NS++ ++  CG + +A +VF EM E
Sbjct: 658 ALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEE 706


>ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  118 bits (296), Expect = 2e-24
 Identities = 66/168 (39%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
 Frame = -2

Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
           P  L L   CKS  Q +QI +   V+GLH   F +SR++   ++ L ++D    L+    
Sbjct: 10  PSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSL-LGSKD---GLDHSRL 65

Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLP-DKFTFPFLLQACRSNF 150
           +F+QID PN+F WNTMIR ++ SDN       Y+ M+ + + P + FTFPFLL +C    
Sbjct: 66  LFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLS 125

Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEML 6
            L    +VH+H +K GF  +LFV+N+++H+Y + G++  AR +FDE L
Sbjct: 126 SLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESL 173


>ref|XP_006341682.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Solanum tuberosum]
          Length = 752

 Score =  117 bits (293), Expect = 4e-24
 Identities = 62/162 (38%), Positives = 94/162 (58%)
 Frame = -2

Query: 500 LLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIF 321
           L SL  +CKS++QL QI S +   GL  +P + S ++  C+    N + G  +++   +F
Sbjct: 50  LQSLIERCKSMDQLRQIHSVIIQKGLISDPKLCSNIIAFCS----NNELG-DMKYARSVF 104

Query: 320 NQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLG 141
           + + E  +F WNTMI+ ++  ++  N    Y EML   + PD +TFPFLL+       L 
Sbjct: 105 DIMPERGVFIWNTMIKGYSRENSPQNGVSIYREMLNNNVQPDNYTFPFLLKGFTREVSLK 164

Query: 140 LAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFD 15
           L K +H H  KFGF +N FV ++++HVY +CG V  AR VFD
Sbjct: 165 LGKSMHAHVCKFGFELNEFVHHALIHVYGLCGQVDMARGVFD 206


>ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Solanum tuberosum]
          Length = 477

 Score =  117 bits (293), Expect = 4e-24
 Identities = 64/168 (38%), Positives = 98/168 (58%)
 Frame = -2

Query: 506 PRLLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIR 327
           P L  L  QC SL+QL QI + + +S    + +  SR+L   A+          L + +R
Sbjct: 30  PHLSLLADQCTSLHQLKQIHAQMIISARIHDNYAASRLLSFSALSESGS-----LSYAVR 84

Query: 326 IFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFD 147
           +F+ I+EPN F WNT+IRA A S N       Y++M R  + P K TFPF+L+AC +   
Sbjct: 85  LFDSINEPNSFMWNTLIRAQAGSSNPRQALLLYVKMQRLCVAPGKHTFPFVLKACSNVMC 144

Query: 146 LGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
           + +++QVH H +KFG +++L V N ++  Y +   + DAR+VFDE+ E
Sbjct: 145 IYVSRQVHCHAIKFGLDLDLHVVNGLIRAYSVSRVLRDARQVFDEVPE 192



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 29/109 (26%), Positives = 58/109 (53%)
 Frame = -2

Query: 329 RIFNQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNF 150
           ++F+++ E N+  W TMI  FA +D   +    +  ML   + P+  T   +L AC  + 
Sbjct: 185 QVFDEVPERNLSIWTTMICGFAQNDRYGDVIQLFERMLEDGMTPNGATLASVLSACAQSG 244

Query: 149 DLGLAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
            L L +Q+H +  + G  + + +  +++++Y   G++V+A + F  M E
Sbjct: 245 SLQLGEQIHAYMEENGMELGVILGTALVNMYAKNGAIVEANKCFSSMRE 293


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score =  117 bits (293), Expect = 4e-24
 Identities = 61/166 (36%), Positives = 97/166 (58%)
 Frame = -2

Query: 500 LLSLEHQCKSLNQLIQILSYVFVSGLHRNPFVMSRVLYSCAVGLENEDCGLKLEFGIRIF 321
           ++ +  +C S+ QL QI + + ++    + F  SR+L  CA+    +     + + I++F
Sbjct: 52  IMDMVDKCTSMTQLKQIHAQMILTSRISDHFAASRLLSFCALSNSRD-----INYAIKLF 106

Query: 320 NQIDEPNIFTWNTMIRAFATSDNSINPFHYYIEMLRRELLPDKFTFPFLLQACRSNFDLG 141
             I +PNIF WNT+IRA A S N      +YI+MLR  + P+K+TFPFLL+ C S   + 
Sbjct: 107 KSIQDPNIFMWNTIIRALANSSNPDQALFFYIQMLRLGVCPNKYTFPFLLKGC-SFCSIQ 165

Query: 140 LAKQVHNHTVKFGFNINLFVQNSVLHVYLICGSVVDARRVFDEMLE 3
             KQ+H H +KFG +++L V N ++ VY I   + DA ++F E  E
Sbjct: 166 SCKQIHTHVLKFGSDLDLHVVNRLVRVYSIFSDLTDAWKLFGEFPE 211


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