BLASTX nr result
ID: Akebia24_contig00002465
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia24_contig00002465 (1064 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] 288 2e-75 ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta... 273 7e-71 ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Popu... 265 2e-68 ref|XP_006452381.1| hypothetical protein CICLE_v10008936mg [Citr... 263 1e-67 ref|XP_007020796.1| Geranyl-diphosphate synthase, putative [Theo... 261 5e-67 gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate syntha... 260 6e-67 gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] 259 2e-66 ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyro... 253 9e-65 gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa] 251 5e-64 gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antir... 246 1e-62 ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synt... 245 2e-62 emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera] 243 1e-61 ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medic... 240 8e-61 gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavan... 238 3e-60 gb|AFK47692.1| unknown [Medicago truncatula] 238 3e-60 pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Syn... 238 3e-60 gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I... 233 8e-59 ref|XP_007214528.1| hypothetical protein PRUPE_ppa015010mg [Prun... 233 1e-58 gb|EXB38722.1| Heterodimeric geranylgeranyl pyrophosphate syntha... 226 2e-56 gb|ACQ90681.1| geranyl diphosphate synthase small subunit [Humul... 224 4e-56 >dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis] Length = 306 Score = 288 bits (738), Expect = 2e-75 Identities = 149/302 (49%), Positives = 206/302 (68%), Gaps = 2/302 (0%) Frame = +1 Query: 82 VTNSLSFSSLSRTNLQCPLQSYRPMRVTMAQNQSYWATINTDLESHLERAIPLRAPLSVF 261 + +L ++S +N + PL S+RPM V M+ +QSYW+++N DL++HL++AIP+R PL+VF Sbjct: 9 IHGNLIARAVSSSNPKHPLFSHRPMVVAMSTDQSYWSSVNADLDTHLKQAIPIRQPLAVF 68 Query: 262 EPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPK 441 EPM HL+ +AP+ APALCIAACELVGG R Q THE+LPLTDRP+ Sbjct: 69 EPMRHLILSAPQTSAPALCIAACELVGGHRNQAMAAASALRLVHASASTHENLPLTDRPR 128 Query: 442 P--KSKPTAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAMGS 615 P +++PT + NIELL DGI+P+GFELLAR DD NNS+++LR I+EI+RAMGS Sbjct: 129 PMPRTRPTL---YGPNIELLIADGIIPYGFELLARDDDAAENNSNRVLRAIIEISRAMGS 185 Query: 616 EGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKL 795 +G+++GQY + SEG E+ GW+ V +KKEG L++ SE+EIEKL Sbjct: 186 QGVIEGQYNESQYEESEGEEIFHVGWLQNVCRKKEGTLHACAGACGAILGGGSEDEIEKL 245 Query: 796 RKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLVDTSY 975 R+YGLYVGM+ G++ E K ++ V +LR LALKEL+ F +A V+TIS LV+T + Sbjct: 246 RRYGLYVGMVQGIL--SKVDERKEWPVKEVNKLRDLALKELKDFNQAKVKTISILVETRF 303 Query: 976 CN 981 CN Sbjct: 304 CN 305 >ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] gi|223527725|gb|EEF29831.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis] Length = 308 Score = 273 bits (699), Expect = 7e-71 Identities = 144/280 (51%), Positives = 186/280 (66%), Gaps = 3/280 (1%) Frame = +1 Query: 136 LQSYRPMRVTMAQNQS--YWATINTDLESHLERAIPLRAPLSVFEPMHHLVFAAPRNMAP 309 L S RP+ M+ + YW IN D+E+HL+ AIP+R P+ VFEPMHHL FAAPR+ AP Sbjct: 30 LFSRRPVACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAP 89 Query: 310 ALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPKPKSKPTAHHAFSANIE 489 ALCIAACELVGG R+Q FTHE++PLTDRP+P ++P HH F NIE Sbjct: 90 ALCIAACELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIE 149 Query: 490 LLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAMGSEGMLDGQYIQMLCTRSEG 669 LLTGDG++PF FELLA+ ++P +NSD+ILRV++EI+RAMGS+GM++GQY + +S G Sbjct: 150 LLTGDGMIPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVG 209 Query: 670 GELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGV 849 EL W+ V KKKEG ++ +EEEIEKLR+YGLYVG I G+ Sbjct: 210 DELFHVAWLRDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGIYNKVE 269 Query: 850 GREDKVGLLEMVERLRSLALKELESF-KEANVETISSLVD 966 G E+ L+ V +LR LALKEL+ F +E V I SLV+ Sbjct: 270 GNEE--WSLKEVNKLRDLALKELKDFNEEEKVRAICSLVE 307 >ref|XP_002322072.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa] gi|550321901|gb|EEF06199.2| hypothetical protein POPTR_0015s04050g [Populus trichocarpa] Length = 312 Score = 265 bits (677), Expect = 2e-68 Identities = 144/292 (49%), Positives = 190/292 (65%), Gaps = 7/292 (2%) Frame = +1 Query: 109 LSRTNLQCPLQSYRPMRVTMAQ-------NQSYWATINTDLESHLERAIPLRAPLSVFEP 267 L R+N PL S+RPM V + N+SYW ++N ++++HL++AIP+R PLSVFEP Sbjct: 20 LPRSNTNRPLLSHRPMTVAVTATSNGTTYNKSYWTSVNDEIDAHLKQAIPIRPPLSVFEP 79 Query: 268 MHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPKPK 447 MHHL FAAPR APALCIAACELVGG R+Q THEH+ T Sbjct: 80 MHHLTFAAPRTTAPALCIAACELVGGNRDQAMAAASALRLMHAAALTHEHILSTG----- 134 Query: 448 SKPTAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAMGSEGML 627 ++ H+F +NIELLTGDG++PFG ELLA+SDD T NNS++ILRVI+EIT+AMGS+GM Sbjct: 135 NRARIGHSFGSNIELLTGDGMVPFGLELLAKSDDLTQNNSERILRVIIEITQAMGSQGMA 194 Query: 628 DGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYG 807 GQY Q + Q ++D V KKKEG L+S +EEEIEKLR+YG Sbjct: 195 LGQYNQF--------QHGQSDYIDHVCKKKEGELHSCAGAVGAILGGGTEEEIEKLRRYG 246 Query: 808 LYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLV 963 LYVG++ G++ V R+++V + +++ L +LALKELE F V+ ISSLV Sbjct: 247 LYVGLMQGVLSNWVERKEEVSMEKVLNELENLALKELEGFDRGKVQAISSLV 298 >ref|XP_006452381.1| hypothetical protein CICLE_v10008936mg [Citrus clementina] gi|568842242|ref|XP_006475060.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Citrus sinensis] gi|557555607|gb|ESR65621.1| hypothetical protein CICLE_v10008936mg [Citrus clementina] Length = 320 Score = 263 bits (671), Expect = 1e-67 Identities = 143/298 (47%), Positives = 190/298 (63%), Gaps = 14/298 (4%) Frame = +1 Query: 115 RTNLQCPLQSYRPMRVTMA-----QNQSYWATINTDLESHLERAIPLRAPLSVFEPMHHL 279 R N P SYRPM VTMA +N+SYW +++ D+ +HL +A+ ++ P+ V+EPM H Sbjct: 17 RRNHSRPSLSYRPMMVTMAMSTPNKNKSYWTSVHEDIGAHLRQAVVVKEPVEVYEPMRHF 76 Query: 280 VFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPK--PKSK 453 VFAAP NMAPALC+AACELVGG REQ F HE+LPL+DR PKSK Sbjct: 77 VFAAPVNMAPALCVAACELVGGHREQAIVAAAALHVMHAASFIHENLPLSDRTSLIPKSK 136 Query: 454 PTAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAMGSEGMLDG 633 PT +HAF N ELL D +LPFG ELLA SD+P GNNS +ILRV++E+TRAMGS+G+++G Sbjct: 137 PTMYHAFKPNTELLVADAMLPFGLELLASSDNPAGNNSGRILRVMVEMTRAMGSQGVVEG 196 Query: 634 QYIQMLCTRSEGGELCQEGWMD-----QVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLR 798 QY ++ C++ + + G D + YKKKEG L++ SE+EIE LR Sbjct: 197 QYNELQCSQCDDDDRKLNGITDVEMTYETYKKKEGRLHACGAACGAILGGGSEKEIELLR 256 Query: 799 KYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLA--LKELESFKEANVETISSLVD 966 +YG YVGMI G++ ++G E +E L+ LA L+E+ SF + N E I SLVD Sbjct: 257 RYGFYVGMIQGIV------SRRLGPTEEIEELKKLAFKLREVNSFNDENAEVIFSLVD 308 >ref|XP_007020796.1| Geranyl-diphosphate synthase, putative [Theobroma cacao] gi|508720424|gb|EOY12321.1| Geranyl-diphosphate synthase, putative [Theobroma cacao] Length = 300 Score = 261 bits (666), Expect = 5e-67 Identities = 135/277 (48%), Positives = 184/277 (66%) Frame = +1 Query: 145 YRPMRVTMAQNQSYWATINTDLESHLERAIPLRAPLSVFEPMHHLVFAAPRNMAPALCIA 324 Y+PM VTM+ NQSYWA+IN D+E+HL++AIP+R PLSV +PMHHL FA P+N APALC+A Sbjct: 25 YKPMMVTMSCNQSYWASINADIEAHLKQAIPVREPLSVSQPMHHLTFACPKNTAPALCVA 84 Query: 325 ACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPKPKSKPTAHHAFSANIELLTGD 504 ACELVGG R+Q FTHE LPLT +P+S T HA+ NIELL GD Sbjct: 85 ACELVGGHRDQALPAASALHLMYAASFTHEQLPLTQSSRPRS--TIQHAYGPNIELLIGD 142 Query: 505 GILPFGFELLARSDDPTGNNSDKILRVILEITRAMGSEGMLDGQYIQMLCTRSEGGELCQ 684 ++P G ELLARSDDP +S+++LRV++EITRA GS+GM+ GQY ++ +S E Sbjct: 143 AMIPSGLELLARSDDPAHTDSERVLRVMVEITRATGSQGMIHGQYYEVERCQSGNKEASY 202 Query: 685 EGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDK 864 ++++ +K EG L++ SEEEIEK+R+YGLY+G I GM+ R Sbjct: 203 MVEIERISEKYEGALHACAAACGAIVGGGSEEEIEKMRRYGLYIGKIQGML--NRIRSHD 260 Query: 865 VGLLEMVERLRSLALKELESFKEANVETISSLVDTSY 975 L ++VE LR+LA +EL+ F EA + ISS ++++ Sbjct: 261 QELNKLVEELRNLASRELQGFYEAKIAAISSCFESNF 297 >gb|EXB38724.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Morus notabilis] Length = 306 Score = 260 bits (665), Expect = 6e-67 Identities = 139/289 (48%), Positives = 193/289 (66%), Gaps = 3/289 (1%) Frame = +1 Query: 106 SLSRTNLQCPLQSYRPMRVTMAQNQS-YWATINTDLESHLERAIPLRAPLSVFEPMHHLV 282 +LS + + P+ + P ++T +Q+QS Y A+I D+E+HL++AIPL++PLSV+ PMHH+ Sbjct: 18 TLSSFSYRQPILCHAPRKMTTSQDQSSYRASITADIEAHLKQAIPLKSPLSVYAPMHHMT 77 Query: 283 FAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPKPKSKP-- 456 F+AP N APALC+AACELVGG R + FTHEHLPLTDRPKPK KP Sbjct: 78 FSAPPNPAPALCVAACELVGGDRSKAMAAASALHLMHAASFTHEHLPLTDRPKPKPKPKP 137 Query: 457 TAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAMGSEGMLDGQ 636 T H F+ NIELL D ++PF +EL A SDDPT + S ++LRVI+E+ R MGS+G++D Q Sbjct: 138 TVDHPFNPNIELLIPDAMVPFAYELSAVSDDPTQDTSGRVLRVIVELARVMGSQGIVDAQ 197 Query: 637 YIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYV 816 Y ++L + +G EL W+D + ++KEG L++ +EEE+E+LRKYGLYV Sbjct: 198 YREVLVSPLDGRELNDIEWVDDMCRRKEGRLHACAAACGAILGGANEEEVERLRKYGLYV 257 Query: 817 GMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLV 963 G++ G +GR +V LE V LR+LA+KEL+ FK VE ISS + Sbjct: 258 GIMQG-YTNRLGR--RVKELERVVELRNLAMKELDHFKGRKVEEISSFI 303 >gb|AGL91646.1| geranyl diphosphate synthase [Catharanthus roseus] Length = 299 Score = 259 bits (661), Expect = 2e-66 Identities = 143/295 (48%), Positives = 199/295 (67%) Frame = +1 Query: 97 SFSSLSRTNLQCPLQSYRPMRVTMAQNQSYWATINTDLESHLERAIPLRAPLSVFEPMHH 276 +F S+SR++L +RP V ++ S WA I +D+++HL+++IP+RAP VFEPMH+ Sbjct: 15 TFLSISRSDLSPTTPPHRPNSVICMKSNS-WANIESDIQTHLKKSIPIRAPEDVFEPMHY 73 Query: 277 LVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPKPKSKP 456 L FAAPR APALCIAACE+VGG +Q + HE+LPLTDR +P KP Sbjct: 74 LTFAAPRTTAPALCIAACEVVGGDGDQAMAAAAAIHLVHAAAYAHENLPLTDRRRP--KP 131 Query: 457 TAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAMGSEGMLDGQ 636 H F++NIELLTGDGI+P+GFELLA+S D NNSD+ILRVI+EIT+A GS+G++DGQ Sbjct: 132 PIQHKFNSNIELLTGDGIVPYGFELLAKSMD--SNNSDRILRVIIEITQAAGSKGIIDGQ 189 Query: 637 YIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYV 816 + ++ SE G ++ V KKKEG L + SEEEI KLRK+GLY Sbjct: 190 FRELDVIDSE----INMGLIEYVCKKKEGELNACGAACGAILGGGSEEEIGKLRKFGLYA 245 Query: 817 GMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLVDTSYCN 981 GMI G +++GVG+ ++ + E+V +LR LA++EL+S K ++TISSL++T C+ Sbjct: 246 GMIQG-LVHGVGK-NREEIQELVRKLRYLAMEELKSLKNRKIDTISSLLETDLCS 298 >ref|XP_004491403.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cicer arietinum] Length = 302 Score = 253 bits (646), Expect = 9e-65 Identities = 137/301 (45%), Positives = 192/301 (63%), Gaps = 5/301 (1%) Frame = +1 Query: 79 HVTNSLSFSSLSRTNLQCPLQSYRPMRVTMAQNQS-----YWATINTDLESHLERAIPLR 243 +V +++ FS +S++N +P V M+ Q+ YWA++ D+E+HL+++I ++ Sbjct: 10 NVKSTVHFSCISKSNQYRSHLPLKPTTVRMSMTQTHHTHPYWASLQADIEAHLKQSITIK 69 Query: 244 APLSVFEPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLP 423 PL VFEPMHHLVF AP+ PALC+AACELVGGQR Q +THEHL Sbjct: 70 EPLVVFEPMHHLVFNAPKTTVPALCLAACELVGGQRNQAISAASALLLMEAATYTHEHLL 129 Query: 424 LTDRPKPKSKPTAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITR 603 L+DRPKP KP HA+ N+ELLTGDGI+PFGFELLARS+ G NS++ILRV++EI+R Sbjct: 130 LSDRPKP--KPVITHAYGPNVELLTGDGIVPFGFELLARSNG--GENSERILRVMVEISR 185 Query: 604 AMGSEGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEE 783 A+GS G++D QY + + + S+G E+C + +V +K EG L++ SEEE Sbjct: 186 AVGSGGVIDAQYRKTMDSGSDGDEMCHVEGIRRVVEKYEGELHACGAVCGGVLGGGSEEE 245 Query: 784 IEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLV 963 IE+LR YG YVGMI GM+ G ++K VE R AL EL+ FK+ V+ IS+ + Sbjct: 246 IERLRNYGFYVGMIQGMLQRGFKDDNK-----EVEETRKFALHELQFFKDREVDAISTFL 300 Query: 964 D 966 + Sbjct: 301 N 301 >gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa] Length = 301 Score = 251 bits (640), Expect = 5e-64 Identities = 135/301 (44%), Positives = 195/301 (64%), Gaps = 5/301 (1%) Frame = +1 Query: 79 HVTN---SLSFSSLSRTNLQCPLQSYRPMRVTMAQNQS-YWATINTDLESHLERAIPLRA 246 H+TN ++ FS +S + +P V M+ Q+ YWA+++ D+E+HL++ I ++ Sbjct: 7 HLTNVKSTVHFSCISNQHRSHLTTKLKPTTVRMSMTQTPYWASLHADVEAHLKQTITIKE 66 Query: 247 PLSVFEPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPL 426 PL VFEPMHHL+F AP+ PALC+AACELVGGQR++ +THEHLPL Sbjct: 67 PLLVFEPMHHLIFTAPKTTVPALCLAACELVGGQRQEAISAASALLLMEAATYTHEHLPL 126 Query: 427 TDRPKPKSKPTAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRA 606 +DRP PK P H + N+ELLTGDGI+PFGFELLARSD G NS++IL+V++EI+RA Sbjct: 127 SDRPGPKPGPMIDHVYGPNVELLTGDGIVPFGFELLARSDG--GENSERILKVMVEISRA 184 Query: 607 MGS-EGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEE 783 +GS G++D QY++ L S+G E+C + +V +K EG L+S EEE Sbjct: 185 VGSGGGVIDAQYMKTLGGGSDGDEICHVEEIRRVVEKYEGRLHSCGAVCGGVLGGGCEEE 244 Query: 784 IEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLV 963 IE+LRK+G YVG+I GM+ +G + K E+VE R+LA++EL+ FK+ V+ I + + Sbjct: 245 IERLRKFGFYVGIIQGMIKWGFKEDHK----EVVE-ARNLAIQELKFFKDKEVDAIKTFL 299 Query: 964 D 966 + Sbjct: 300 N 300 >gb|AAS82859.1| geranyl diphosphate synthase small subunit [Antirrhinum majus] Length = 297 Score = 246 bits (628), Expect = 1e-62 Identities = 136/297 (45%), Positives = 187/297 (62%) Frame = +1 Query: 85 TNSLSFSSLSRTNLQCPLQSYRPMRVTMAQNQSYWATINTDLESHLERAIPLRAPLSVFE 264 T S F S++++ P S RP+ + M + Q+Y ATI +D+ES+L++AIP+RAP SVFE Sbjct: 10 TKSGLFPSITKSKTTRP--STRPVILAMTRTQTYRATIESDIESYLKKAIPIRAPESVFE 67 Query: 265 PMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPKP 444 PMHHL FAAPR A ALC+AACELVGG R +THE+LPLTD P Sbjct: 68 PMHHLTFAAPRTSASALCVAACELVGGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMS 127 Query: 445 KSKPTAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAMGSEGM 624 KS+ H F NIELLTGDGI+PFG EL+ARS DPT NN D+ILR I+E+TR MGSEG+ Sbjct: 128 KSE--IQHKFDPNIELLTGDGIIPFGLELMARSMDPTRNNPDRILRAIIELTRVMGSEGI 185 Query: 625 LDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKY 804 ++GQY ++ + EL ++ V KKKEG L++ E++IEKLR++ Sbjct: 186 VEGQYHELGLNQLNDLEL-----IEYVCKKKEGTLHACGAACGAILGGCDEDKIEKLRRF 240 Query: 805 GLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLVDTSY 975 GLYVG + G++ +++ G ++ L+ LA+KELESF +E I + + + Sbjct: 241 GLYVGTVQGLL-----GKNRSGFEGRIKELKELAVKELESFGGEKIELIRGVFELEH 292 >ref|XP_002278023.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein, chloroplastic [Vitis vinifera] Length = 298 Score = 245 bits (626), Expect = 2e-62 Identities = 138/298 (46%), Positives = 181/298 (60%), Gaps = 2/298 (0%) Frame = +1 Query: 79 HVTNSLSFSSLSRTNLQCPLQSYRPMRVTMAQNQSYWATINTDLESHLERAIPLRAPLSV 258 H+ S+L R+N + P S P+RVTMAQ SYW +IN D+++HL R I +R P SV Sbjct: 7 HINGQNFISTLHRSNHRRP--SGGPIRVTMAQKSSYWTSINDDIDAHLRRVIAIREPFSV 64 Query: 259 FEPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRP 438 F+PMHHL FAAP APALCIAACELVGG+RE + HEH+PLTD+P Sbjct: 65 FKPMHHLTFAAPETTAPALCIAACELVGGRRELAIAAASALHLMHAASYFHEHIPLTDQP 124 Query: 439 KPKSKPTAHHAFSANIELLTGDGILPFGFELLARSD--DPTGNNSDKILRVILEITRAMG 612 + S P F NIELLTGDG++PFG ELLA+S+ D +SD+IL+VI+E+TR +G Sbjct: 125 RANSPPRPGPTFGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRTIG 184 Query: 613 SEGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEK 792 S+G+++GQYIQ C S + + G V KK L++ E+EIEK Sbjct: 185 SQGVVNGQYIQAQCDES-SPSVGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEK 243 Query: 793 LRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLVD 966 LRKYG Y G I M +++ E++E +R LALKELE F E VE ISS ++ Sbjct: 244 LRKYGFYAGTIQKMSKLEEVEKNR----EVIEEMRRLALKELEYFDEEKVEPISSFIN 297 >emb|CAN63418.1| hypothetical protein VITISV_007690 [Vitis vinifera] Length = 298 Score = 243 bits (619), Expect = 1e-61 Identities = 138/298 (46%), Positives = 180/298 (60%), Gaps = 2/298 (0%) Frame = +1 Query: 79 HVTNSLSFSSLSRTNLQCPLQSYRPMRVTMAQNQSYWATINTDLESHLERAIPLRAPLSV 258 HV S+L R+N + P S P+RVTMAQ SYW +IN D+++HL R I +R P SV Sbjct: 7 HVNGQNFISTLHRSNHRRP--SGGPIRVTMAQKSSYWNSINDDIDAHLRRVITIREPFSV 64 Query: 259 FEPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRP 438 F+PMHHL FAAP APALCIAACEL GG+RE + HEH+PLTD+ Sbjct: 65 FKPMHHLTFAAPETTAPALCIAACELFGGRRELAIAAASALHLMHAASYFHEHIPLTDQT 124 Query: 439 KPKSKPTAHHAFSANIELLTGDGILPFGFELLARSD--DPTGNNSDKILRVILEITRAMG 612 +P S P F NIELLTGDG++PFG ELLA+S+ D +SD+IL+VI+E+TR +G Sbjct: 125 RPNSPPRPGPTFGPNIELLTGDGMIPFGLELLAKSNNLDDDDEHSDRILQVIIELTRXIG 184 Query: 613 SEGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEK 792 S+G+++GQYIQ C S + + G V KK L++ E+EIEK Sbjct: 185 SQGVVNGQYIQAQCDES-SPSVGKAGSTRIVTDKKGTELHACGAACGAILGGGKEKEIEK 243 Query: 793 LRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLVD 966 LRKYG Y G I M +++ E++E +R LALKELE F E VE ISS ++ Sbjct: 244 LRKYGFYAGTIQKMSKLEEVEKNR----EVIEEMRRLALKELEYFDEEKVEPISSFIN 297 >ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula] gi|355518891|gb|AET00515.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula] Length = 297 Score = 240 bits (612), Expect = 8e-61 Identities = 135/300 (45%), Positives = 196/300 (65%), Gaps = 4/300 (1%) Frame = +1 Query: 79 HVTNSLSFSSLS---RTNLQCPLQSYRPMRVTMAQNQSYWATINTDLESHLERAIPLRAP 249 +V +++ FS +S R++L L+S +R++M Q YWA+++ D+E+HL++ I ++ P Sbjct: 10 NVKSTVHFSCISNQHRSHLNTKLKS-TTLRMSMTQTP-YWASLHADIEAHLKQTITIKEP 67 Query: 250 LSVFEPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLT 429 L VFEPMHHL+F AP+ PALC+A CELVGGQR Q +THEHLPLT Sbjct: 68 LVVFEPMHHLIFTAPKTTVPALCLATCELVGGQRHQAISAASALLLMEAATYTHEHLPLT 127 Query: 430 DRPKPKSKPTAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAM 609 DRP +P +H + N+ELLTGDGI+PFGFELLARSD G NS++IL+V++EI+RA+ Sbjct: 128 DRP----RPMINHVYGPNMELLTGDGIVPFGFELLARSDG--GENSERILKVMVEISRAV 181 Query: 610 GS-EGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEI 786 GS G++D QY ++L + S+G E C + V +K EG L+S EEEI Sbjct: 182 GSGGGVIDAQYGKILYSGSDGEEKCHVEEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEEI 241 Query: 787 EKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLVD 966 E+LRK+G YVG+I GM+ +G + K E+VE R+LA++EL+ FK+ V+ I + ++ Sbjct: 242 ERLRKFGYYVGIIQGMIKWGFKEDHK----EVVE-ARNLAIQELKFFKDKEVDAIKTFLN 296 >gb|AGH33891.1| geranyl diphsophate synthase small subunit [Lavandula x intermedia] Length = 295 Score = 238 bits (607), Expect = 3e-60 Identities = 127/272 (46%), Positives = 179/272 (65%), Gaps = 4/272 (1%) Frame = +1 Query: 160 VTMAQNQSYWATINTDLESHLERAIPLRAPLSVFEPMHHLVFAAPRNMAPALCIAACELV 339 V+ AQN SYW++I+ D+ ++L++AIP+R+P +VFEPMHHL FAAP A ALC+AACEL Sbjct: 24 VSAAQNASYWSSIDADINTYLKKAIPIRSPETVFEPMHHLTFAAPTTTASALCVAACELF 83 Query: 340 GGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPKPKSKPTAHHAFSANIELLTGDGILPF 519 GG R Q +TH+HLPLTDRP+P+SKP H F+ NIELLTGDGI PF Sbjct: 84 GGNRTQALPAASAIHLIHAAAYTHDHLPLTDRPRPESKPDIQHKFNPNIELLTGDGIAPF 143 Query: 520 GFELLARSDDPTGNNSDKILRVILEITRAMGSEGMLDGQY--IQMLCTRSEGGELCQEGW 693 GFELLA S D T + D+ILRV++EI+RA GS+G++DG Y Q++ RS + + Sbjct: 144 GFELLANSVDTT--HPDRILRVVIEISRASGSQGLVDGLYREKQIVDQRS------RFEF 195 Query: 694 MDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGM--MLYGVGREDKV 867 ++ V KKK G +++ EE+I+KLR +GLY G + GM M G+ +++ Sbjct: 196 IEYVSKKKYGEMHACGAASGVILAGGDEEQIQKLRNFGLYAGTVRGMIEMKSGLEKKNIA 255 Query: 868 GLLEMVERLRSLALKELESFKEANVETISSLV 963 + +++ + + LA+KE+E F+ N E ISSLV Sbjct: 256 QIEKIIIKFQQLAMKEMEGFQGKNAELISSLV 287 >gb|AFK47692.1| unknown [Medicago truncatula] Length = 297 Score = 238 bits (607), Expect = 3e-60 Identities = 134/300 (44%), Positives = 194/300 (64%), Gaps = 4/300 (1%) Frame = +1 Query: 79 HVTNSLSFSSLS---RTNLQCPLQSYRPMRVTMAQNQSYWATINTDLESHLERAIPLRAP 249 +V +++ FS +S R++L L+S +R +M Q YWA+++ D+E+HL++ I ++ P Sbjct: 10 NVKSTVHFSCISNQHRSHLNTKLKS-TTLRTSMTQTP-YWASLHADIEAHLKQTITIKEP 67 Query: 250 LSVFEPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLT 429 L VFEPMHHL+F AP+ PALC+A CE VGGQR Q +THEHLPLT Sbjct: 68 LVVFEPMHHLIFTAPKTTVPALCLATCEFVGGQRHQAISAASALLLMEAATYTHEHLPLT 127 Query: 430 DRPKPKSKPTAHHAFSANIELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAM 609 DRP +P +H + N+ELLTGDGI+PFGFELLARSD G NS++IL+V++EI+RA+ Sbjct: 128 DRP----RPMINHVYGPNMELLTGDGIVPFGFELLARSDG--GENSERILKVMVEISRAV 181 Query: 610 GS-EGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEI 786 GS G++D QY ++L + S+G E C + V +K EG L+S EEEI Sbjct: 182 GSGGGVIDAQYGKILYSGSDGEEKCHVEEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEEI 241 Query: 787 EKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLVD 966 E+LRK+G YVG+I GM+ +G + K E+VE R+LA++EL+ FK+ V+ I + ++ Sbjct: 242 ERLRKFGYYVGIIQGMIKWGFKEDHK----EVVE-ARNLAIQELKFFKDKEVDAIKTFLN 296 >pdb|3QKC|B Chain B, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus gi|323463188|pdb|3QKC|A Chain A, Crystal Structure Of Geranyl Diphosphate Synthase Small Subunit From Antirrhinum Majus Length = 273 Score = 238 bits (607), Expect = 3e-60 Identities = 127/272 (46%), Positives = 175/272 (64%) Frame = +1 Query: 160 VTMAQNQSYWATINTDLESHLERAIPLRAPLSVFEPMHHLVFAAPRNMAPALCIAACELV 339 +++ + Q+Y ATI +D+ES+L++AIP+RAP SVFEPMHHL FAAPR A ALC+AACELV Sbjct: 1 MSLTRTQTYRATIESDIESYLKKAIPIRAPESVFEPMHHLTFAAPRTSASALCVAACELV 60 Query: 340 GGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRPKPKSKPTAHHAFSANIELLTGDGILPF 519 GG R +THE+LPLTD P KS+ H F NIELLTGDGI+PF Sbjct: 61 GGDRSDAMAAAAAVHLMHVAAYTHENLPLTDGPMSKSE--IQHKFDPNIELLTGDGIIPF 118 Query: 520 GFELLARSDDPTGNNSDKILRVILEITRAMGSEGMLDGQYIQMLCTRSEGGELCQEGWMD 699 G EL+ARS DPT NN D+ILR I+E+TR MGSEG+++GQY ++ + EL ++ Sbjct: 119 GLELMARSMDPTRNNPDRILRAIIELTRVMGSEGIVEGQYHELGLNQLNDLEL-----IE 173 Query: 700 QVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLE 879 V KKKEG L++ E++IEKLR++GLYVG + G++ +++ G Sbjct: 174 YVCKKKEGTLHACGAACGAILGGCDEDKIEKLRRFGLYVGTVQGLL-----GKNRSGFEG 228 Query: 880 MVERLRSLALKELESFKEANVETISSLVDTSY 975 ++ L+ LA+KELESF +E I + + + Sbjct: 229 RIKELKELAVKELESFGGEKIELIRGVFELEH 260 >gb|AEZ55678.1| geranyl diphosphate synthase small subunit type I [Salvia miltiorrhiza] Length = 314 Score = 233 bits (595), Expect = 8e-59 Identities = 132/304 (43%), Positives = 185/304 (60%), Gaps = 4/304 (1%) Frame = +1 Query: 79 HVTNSLSFSSLSRTNLQCPLQSYRPMRVTMAQNQSYWATINTDLESHLERAIPLRAPLSV 258 +V SF +R+NL +S R +AQN SYWA I D++++L+++I +R+P +V Sbjct: 18 YVNTKSSFPFKTRSNLS---RSSRACTAVVAQNHSYWAAIEADIDTYLKKSIAIRSPETV 74 Query: 259 FEPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDRP 438 FEPMHHL FAAPR A A+C+AACELVGG+R Q + HEHLPLTDRP Sbjct: 75 FEPMHHLTFAAPRTAASAICVAACELVGGERSQAIATASAIHIMHAAAYAHEHLPLTDRP 134 Query: 439 KPKSKPTAHHAFSANIELLTGDGILPFGFELLA---RSDDPTGNNSDKILRVILEITRAM 609 +P SKP H + NIELLTGDG+ FGFELLA RSD P N ++ILRVI+EI+RA Sbjct: 135 RPNSKPAIQHKYGPNIELLTGDGMASFGFELLAGSIRSDHP---NPERILRVIIEISRAS 191 Query: 610 GSEGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIE 789 GSEG++DG Y + + + + +++ + +KK G +++ +EEEI+ Sbjct: 192 GSEGIIDGFYRE----KEIVDQHSRFDFIEYLCRKKYGEMHACAAASGAILAGGAEEEIQ 247 Query: 790 KLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSLV-D 966 KLR +G Y G + G++ + D + ++ +L+ LALKELE F NVE + SLV D Sbjct: 248 KLRNFGHYAGTLIGLLHKKI---DTPQIQNVIGKLKDLALKELEGFHGKNVELLCSLVAD 304 Query: 967 TSYC 978 S C Sbjct: 305 ASLC 308 >ref|XP_007214528.1| hypothetical protein PRUPE_ppa015010mg [Prunus persica] gi|462410393|gb|EMJ15727.1| hypothetical protein PRUPE_ppa015010mg [Prunus persica] Length = 296 Score = 233 bits (593), Expect = 1e-58 Identities = 138/276 (50%), Positives = 173/276 (62%), Gaps = 7/276 (2%) Frame = +1 Query: 148 RPMRVTMA---QNQSYWATINTDLESHLERAIPLRAPLSVFEPMHHLVFAAPRNMAPALC 318 RP R TMA Q+ YWA+++ ++E HL++ I +R PLSVFEPMHHLVF+AP + PALC Sbjct: 25 RPSRTTMAIMSQDHPYWASVHAEIEVHLKQHILVRPPLSVFEPMHHLVFSAPPSPGPALC 84 Query: 319 IAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLTDR--PKPKSKPTAHHAFSANIEL 492 +AACELVGG R+Q HE L TDR KPK +P H S IEL Sbjct: 85 VAACELVGGHRDQAIAAAAALHLMHAAAVIHEQLLSTDRLKTKPKPRPMVH---SPGIEL 141 Query: 493 LTGDGILPFGFELLARSDDPTGNNSDKILRVILEITRAMGSEGMLDGQY--IQMLCTRSE 666 LTGDG+ FG+ELLA+S DP NNSD+ILRVI+E+TRAMGS+GM+DGQY I MLC +S Sbjct: 142 LTGDGMFAFGYELLAKSMDPAQNNSDRILRVIVEMTRAMGSQGMVDGQYHEILMLCKQSR 201 Query: 667 GGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMMLYG 846 V +KKEGGL++ SEEEIE+LR+YGL VG++ Sbjct: 202 --------HYKYVCEKKEGGLHACGAACGAILGGASEEEIERLRRYGLCVGVMIAFS-NR 252 Query: 847 VGREDKVGLLEMVERLRSLALKELESFKEANVETIS 954 V +++ E+V+ LRSLALKELE F E E IS Sbjct: 253 VEEGNEMETTEVVKELRSLALKELEFFHEGKAEAIS 288 >gb|EXB38722.1| Heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Morus notabilis] Length = 306 Score = 226 bits (575), Expect = 2e-56 Identities = 134/301 (44%), Positives = 190/301 (63%), Gaps = 6/301 (1%) Frame = +1 Query: 79 HVTNSLSFSSLSRTNLQC-PLQSYRPMRV-TMAQNQS-YWATINTDLESHLERAIPLRAP 249 H T++L ++ + ++ C PL P ++ TM ++QS Y A+I ++E+HL++AIPL+ P Sbjct: 7 HNTSALRLNNPTLSSFSCRPLLCQVPRKIITMCRDQSSYCASITAEIEAHLKQAIPLKPP 66 Query: 250 LSVFEPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXXXXXXXXXXXXXFTHEHLPLT 429 L+VFEPMHH+ F+AP N APALC+AACEL+GG R Q THE L + Sbjct: 67 LTVFEPMHHMTFSAPLNSAPALCVAACELIGGSRSQAMAAASALYLMLAASVTHEKLHIP 126 Query: 430 DRPKPKSKPTAHHAFSAN---IELLTGDGILPFGFELLARSDDPTGNNSDKILRVILEIT 600 +R KPK KP A SAN +L+ D ++PFG+ELLA SDDP + S ++LRVI+E+ Sbjct: 127 NRLKPKPKP-APGVCSANGPMFDLMFLDAMVPFGYELLAISDDPDQDTSGRVLRVIVELA 185 Query: 601 RAMGSEGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGLYSXXXXXXXXXXXXSEE 780 RAMGS+G++ QY ++ ++ +GG +D + +KKEG +++ +EE Sbjct: 186 RAMGSQGIIHAQYQGVIVSQLDGGGSNNIELIDDMCRKKEGRVHACAAACGAILGGANEE 245 Query: 781 EIEKLRKYGLYVGMIHGMMLYGVGREDKVGLLEMVERLRSLALKELESFKEANVETISSL 960 EIEKLRKYGLYVG+I G +GR KV +E V LR+LALKEL+ FK VE ISS Sbjct: 246 EIEKLRKYGLYVGIIQG-YTNRLGR--KVKEIERVVELRNLALKELDHFKGQKVEEISSF 302 Query: 961 V 963 + Sbjct: 303 I 303 >gb|ACQ90681.1| geranyl diphosphate synthase small subunit [Humulus lupulus] Length = 279 Score = 224 bits (572), Expect = 4e-56 Identities = 123/264 (46%), Positives = 168/264 (63%), Gaps = 1/264 (0%) Frame = +1 Query: 190 ATINTDLESHLERAIPLRAPLSVFEPMHHLVFAAPRNMAPALCIAACELVGGQREQXXXX 369 A+I D+E+HL+++I L+ PLSV EPM++LVF+AP N AP+LC+AACELVGG R + Sbjct: 20 ASITADIEAHLKQSITLKPPLSVHEPMYNLVFSAPPNSAPSLCVAACELVGGHRSKAIAA 79 Query: 370 XXXXXXXXXXXFTHEHLPLTDRPKPKSKPTAHHAFSANIELLTGDGILPFGFELLARSDD 549 FTHEHLPLTD P P P H+++ +I+LL D ILP GFELLA+S + Sbjct: 80 ASALRLLHAANFTHEHLPLTDSPSPS--PVIHNSYDPSIQLLMPDAILPLGFELLAQSYN 137 Query: 550 PTGNNSDKILRVILEITRAMGSEGMLDGQYIQMLCTRSEGGELCQEGWMDQVYKKKEGGL 729 P NNSD++LRVI+E RA GS+G+LDGQY Q + + S G E+ +D ++KEG + Sbjct: 138 PAQNNSDRVLRVIVEFARAFGSKGILDGQYRQRVVSISNGDEVDNAERVDCSGREKEGKM 197 Query: 730 YSXXXXXXXXXXXXSEEEIEKLRKYGLYVGMIHGMML-YGVGREDKVGLLEMVERLRSLA 906 ++ +EEE EKLR +GLYVGMI G + + RE++ ++ LR+LA Sbjct: 198 HACAAACGAILGDANEEETEKLRTFGLYVGMIQGYSIKFMREREEEKEAERTIKELRNLA 257 Query: 907 LKELESFKEANVETISSLVDTSYC 978 LKELE F +E ISS + YC Sbjct: 258 LKELEHFHGRKLEPISSFI---YC 278