BLASTX nr result

ID: Akebia24_contig00002312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00002312
         (203 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007041733.1| Transducin/WD40 repeat-like superfamily prot...    60   2e-07
ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communi...    60   2e-07
ref|XP_007041732.1| Transducin/WD40 repeat-like superfamily prot...    60   3e-07
ref|XP_007199802.1| hypothetical protein PRUPE_ppa004717mg [Prun...    57   3e-06
ref|XP_006486680.1| PREDICTED: DDB1- and CUL4-associated factor ...    55   8e-06
ref|XP_006364512.1| PREDICTED: DDB1- and CUL4-associated factor ...    55   8e-06
ref|XP_006364511.1| PREDICTED: DDB1- and CUL4-associated factor ...    55   8e-06

>ref|XP_007041733.1| Transducin/WD40 repeat-like superfamily protein isoform 2
           [Theobroma cacao] gi|508705668|gb|EOX97564.1|
           Transducin/WD40 repeat-like superfamily protein isoform
           2 [Theobroma cacao]
          Length = 491

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = -2

Query: 202 QLKSKRNDYGLHRFASPEDLMLQLFPVQRWRSRSGRNGEDDDMVSGTELLELLMAFNGNR 23
           Q K K   + ++R  +P+DLML LF +QRW S   RNGE+    +G ELL+L++ FN N 
Sbjct: 417 QFKPKPRGW-MYRVTTPQDLMLHLFSLQRWGSSPERNGENSS-AAGGELLDLMLTFNDNS 474

Query: 22  DNSSGGG 2
           D SS GG
Sbjct: 475 DASSDGG 481


>ref|XP_002521240.1| WD-repeat protein, putative [Ricinus communis]
           gi|223539508|gb|EEF41096.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 482

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = -2

Query: 202 QLKSKRNDYGLHRFASPEDLMLQLFPVQRWRSRSGRNGEDDDMVSGTELLELLMAFNGNR 23
           +LK K   + ++R ASP+DLMLQLF +QRWR+   R   ++   +G ELLEL++ FN N 
Sbjct: 410 RLKPKARGW-MYRIASPQDLMLQLFSLQRWRTSPER--IEESSAAGRELLELMLTFNANS 466

Query: 22  DNSSGG 5
           D+  GG
Sbjct: 467 DSDDGG 472


>ref|XP_007041732.1| Transducin/WD40 repeat-like superfamily protein isoform 1
           [Theobroma cacao] gi|508705667|gb|EOX97563.1|
           Transducin/WD40 repeat-like superfamily protein isoform
           1 [Theobroma cacao]
          Length = 579

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = -2

Query: 172 LHRFASPEDLMLQLFPVQRWRSRSGRNGEDDDMVSGTELLELLMAFNGNRDNSSGGG 2
           ++R  +P+DLML LF +QRW S   RNGE+    +G ELL+L++ FN N D SS GG
Sbjct: 514 MYRVTTPQDLMLHLFSLQRWGSSPERNGENSS-AAGGELLDLMLTFNDNSDASSDGG 569


>ref|XP_007199802.1| hypothetical protein PRUPE_ppa004717mg [Prunus persica]
           gi|462395202|gb|EMJ01001.1| hypothetical protein
           PRUPE_ppa004717mg [Prunus persica]
          Length = 494

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/57 (52%), Positives = 40/57 (70%)
 Frame = -2

Query: 172 LHRFASPEDLMLQLFPVQRWRSRSGRNGEDDDMVSGTELLELLMAFNGNRDNSSGGG 2
           ++R +SPEDLMLQLF +QR R    R+GE+ +   G +LLEL+MAF  N D+SS  G
Sbjct: 429 MYRLSSPEDLMLQLFSLQRQRISPERDGENSN--DGQDLLELIMAFQRNSDDSSEDG 483


>ref|XP_006486680.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X3
           [Citrus sinensis]
          Length = 492

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/64 (46%), Positives = 41/64 (64%)
 Frame = -2

Query: 202 QLKSKRNDYGLHRFASPEDLMLQLFPVQRWRSRSGRNGEDDDMVSGTELLELLMAFNGNR 23
           Q K K   + +H   SPEDLM+QLF +QR R+   RN  D++  +G ELL+L++ FN N 
Sbjct: 428 QFKPKATRW-MHHVLSPEDLMMQLFSLQRRRTSPERN--DENSAAGRELLQLILTFNANS 484

Query: 22  DNSS 11
           D SS
Sbjct: 485 DGSS 488


>ref|XP_006364512.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X3
           [Solanum tuberosum]
          Length = 493

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/57 (50%), Positives = 37/57 (64%)
 Frame = -2

Query: 172 LHRFASPEDLMLQLFPVQRWRSRSGRNGEDDDMVSGTELLELLMAFNGNRDNSSGGG 2
           +H  ASPEDLMLQL   QR R+  G   E+ ++  G ELL+L++ FN N DNSS  G
Sbjct: 428 MHHMASPEDLMLQLLSQQRQRTNLGSIEENSEV--GRELLQLILTFNANSDNSSDDG 482


>ref|XP_006364511.1| PREDICTED: DDB1- and CUL4-associated factor 8-like isoform X2
           [Solanum tuberosum]
          Length = 494

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/57 (50%), Positives = 37/57 (64%)
 Frame = -2

Query: 172 LHRFASPEDLMLQLFPVQRWRSRSGRNGEDDDMVSGTELLELLMAFNGNRDNSSGGG 2
           +H  ASPEDLMLQL   QR R+  G   E+ ++  G ELL+L++ FN N DNSS  G
Sbjct: 429 MHHMASPEDLMLQLLSQQRQRTNLGSIEENSEV--GRELLQLILTFNANSDNSSDDG 483


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