BLASTX nr result
ID: Akebia24_contig00002189
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia24_contig00002189
(510 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 167 1e-39
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 150 1e-34
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 145 4e-33
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 145 4e-33
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 145 4e-33
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The... 144 1e-32
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 142 6e-32
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 141 8e-32
ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 140 2e-31
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 137 1e-30
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 137 1e-30
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 134 2e-29
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 133 2e-29
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 130 2e-28
ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theob... 129 3e-28
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob... 129 3e-28
ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Popu... 129 5e-28
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 128 9e-28
ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutr... 127 2e-27
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 126 4e-27
>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
gi|462411068|gb|EMJ16117.1| hypothetical protein
PRUPE_ppa000719mg [Prunus persica]
Length = 1024
Score = 167 bits (424), Expect = 1e-39
Identities = 89/165 (53%), Positives = 119/165 (72%), Gaps = 6/165 (3%)
Frame = +3
Query: 33 NLMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRN-GVLLSQEEQMGRRNFRYFRNPISF 209
+L+ Q S+ + FEL SS FS++G R G + S E+ M + +F RNPI F
Sbjct: 63 SLLGICQESVFPGNFKPFELSSCSSLRFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWF 122
Query: 210 -----KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMG 374
KG+ASVAEAVSSTD EE+VSVVDE+Q LL++MS E+K+ + Q+ +QN GMG
Sbjct: 123 NGFCPKGYASVAEAVSSTDVEEEVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMG 182
Query: 375 PGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
GKYH+L++RQ+KIETEAW++AA+EY+EL+ DMC+QKLAPNLPYM
Sbjct: 183 QGKYHMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYM 227
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial [Vitis vinifera]
gi|298204431|emb|CBI16911.3| unnamed protein product
[Vitis vinifera]
Length = 1035
Score = 150 bits (380), Expect = 1e-34
Identities = 88/167 (52%), Positives = 113/167 (67%), Gaps = 8/167 (4%)
Frame = +3
Query: 33 NLMRFSQNSIIQK--KTRSFELKIQSSFDFSKMGIRN-GVLLSQEEQMGRRNFRYFRNPI 203
+ + FSQ+ I + K +FE SS FS+MG R G + S+E+ +GR +F RN +
Sbjct: 69 SFLGFSQDLIFPEIMKFGTFEPSSCSSSGFSEMGFRRIGEISSREDAVGRPSFGCLRNQM 128
Query: 204 SFKGF-----ASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGG 368
F GF ASVAEAVSSTD EEDVS DEIQ LL +M KE+K+ ++++ + G
Sbjct: 129 GFSGFCPKSYASVAEAVSSTDVEEDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERG 188
Query: 369 MGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
M G+Y LR+RQVKIETEAW+ AA+EYKELL DMC+QKLAPNLPYM
Sbjct: 189 MEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYM 235
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 145 bits (367), Expect = 4e-33
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Frame = +3
Query: 3 NVAKHVASSRNLMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRNGVLLSQEEQMGRRNF 182
++ K + + + + SQ+SI+++K + L + R G +L+ E+ MGR +F
Sbjct: 59 HLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSF 118
Query: 183 RYFRNPISF--KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQN 356
+N + +G+A+VAEAVSSTD EEDVS+V+EIQ LL++M KE+++ E G + +
Sbjct: 119 GVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRR 178
Query: 357 LVG-GMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
V GMG GKY +L+ RQVKIETEAW+QAA EY+ELL DMC+QKLAPNLPYM
Sbjct: 179 RVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYM 230
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 145 bits (367), Expect = 4e-33
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Frame = +3
Query: 3 NVAKHVASSRNLMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRNGVLLSQEEQMGRRNF 182
++ K + + + + SQ+SI+++K + L + R G +L+ E+ MGR +F
Sbjct: 59 HLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSF 118
Query: 183 RYFRNPISF--KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQN 356
+N + +G+A+VAEAVSSTD EEDVS+V+EIQ LL++M KE+++ E G + +
Sbjct: 119 GVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRR 178
Query: 357 LVG-GMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
V GMG GKY +L+ RQVKIETEAW+QAA EY+ELL DMC+QKLAPNLPYM
Sbjct: 179 RVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYM 230
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 145 bits (367), Expect = 4e-33
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Frame = +3
Query: 3 NVAKHVASSRNLMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRNGVLLSQEEQMGRRNF 182
++ K + + + + SQ+SI+++K + L + R G +L+ E+ MGR +F
Sbjct: 59 HLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSF 118
Query: 183 RYFRNPISF--KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQN 356
+N + +G+A+VAEAVSSTD EEDVS+V+EIQ LL++M KE+++ E G + +
Sbjct: 119 GVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRR 178
Query: 357 LVG-GMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
V GMG GKY +L+ RQVKIETEAW+QAA EY+ELL DMC+QKLAPNLPYM
Sbjct: 179 RVARGMGSGKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYM 230
>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1100
Score = 144 bits (363), Expect = 1e-32
Identities = 87/189 (46%), Positives = 119/189 (62%), Gaps = 20/189 (10%)
Frame = +3
Query: 3 NVAKHVASSR-----------NLMRFSQNSIIQKKTRSFELKIQSSFDFSKM----GIRN 137
N+AKH S R + + SQ+SI +K++ LK S S+ G R
Sbjct: 45 NIAKHAISRRTHSFQCFARTYSFLGTSQDSIFHEKSKFRGLKFGSFCSNSRFLDMGGRRI 104
Query: 138 GVLLSQEEQMGRRNFRYFRNPISF-----KGFASVAEAVSSTDTEEDVSVVDEIQGLLEK 302
G +L+ E +G+++F RN I +G+ SVAEAVSSTD EEDVSVV+EI+ LL++
Sbjct: 105 GEVLTNVEYIGKQSFGSPRNEIGCSGLCPRGYVSVAEAVSSTDVEEDVSVVEEIKELLDE 164
Query: 303 MSKEDKKFFELGQQKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQ 482
M KE ++ +++ Q + GMG KY LR+RQVKIETEAW+QAA+EY+ELL DMC+
Sbjct: 165 MKKEQRRETGNRRRRCQIIERGMGESKYRFLRRRQVKIETEAWEQAAKEYRELLMDMCEH 224
Query: 483 KLAPNLPYM 509
KLAPNLPY+
Sbjct: 225 KLAPNLPYI 233
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 142 bits (357), Expect = 6e-32
Identities = 79/171 (46%), Positives = 115/171 (67%), Gaps = 2/171 (1%)
Frame = +3
Query: 3 NVAKHVASSRNLMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRNGVLLSQEEQMGRRNF 182
++ K + + + + SQ+SI+++K + L + R G +L+ E+ MGR +F
Sbjct: 59 HLKKPFSRAYSFLGISQDSILREKVKFGCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSF 118
Query: 183 RYFRNPISF--KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQN 356
+N + +G+A+VAEAVSSTD EEDVS+V+EIQ LL++M KE + G + ++
Sbjct: 119 GVLKNDNFWCPRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEQQSG---GGRNRRR 175
Query: 357 LVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
+ GMG GKY +L+ RQVKIETEAW++AA EY+ELL DMC+QKLAPNLPYM
Sbjct: 176 VARGMGSGKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYM 226
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and
chloroplast RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 141 bits (356), Expect = 8e-32
Identities = 88/176 (50%), Positives = 114/176 (64%), Gaps = 10/176 (5%)
Frame = +3
Query: 12 KHVASSRN----LMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRN-GVLLSQEEQMGRR 176
K + SS+N + F Q+S+ + T+ F I S MG +N G L +E + R
Sbjct: 50 KLLFSSKNRTYSFLGFGQDSVFKDNTK-FRSLIPISCSNIVMGFQNLGEYLPGDEFLSRP 108
Query: 177 NFRYFRNPISF---KGFASVAEAV--SSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQ 341
+ N F K +ASVAEAV SSTD EEDVSVVDE+Q LL ++ KE+KK F +
Sbjct: 109 LLKNQVNSNDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEEKKQFAFRR 168
Query: 342 QKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
+KQ+ L GMG KY L++RQVK+ETEAW+QAA+EYKELL DMC+QKLAPNLPY+
Sbjct: 169 RKQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 224
>ref|XP_004509767.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Cicer arietinum]
Length = 1002
Score = 140 bits (353), Expect = 2e-31
Identities = 81/171 (47%), Positives = 110/171 (64%), Gaps = 8/171 (4%)
Frame = +3
Query: 21 ASSRNLMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRNGVLLSQEEQMGRRNFRYFRNP 200
+SS + +RFSQ+S +K I S F G + + E ++GR N + +P
Sbjct: 22 SSSSSSLRFSQHSNFPEKILPQTRIINSRHPF--FGFSQVSIFNSENKLGRSNLSFSEDP 79
Query: 201 ISF--------KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQN 356
+F +G+ SVAEA+ S+DTE+D S +E+Q LLE+M KE+KK EL QK N
Sbjct: 80 FTFSSTSVAHFRGYGSVAEAIESSDTEDDHSGCEEVQKLLEEMVKEEKKKPELENQKN-N 138
Query: 357 LVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
GGM KY +L++RQ+KIETEAW++AAREY+ELLEDM +QKLAPNLPYM
Sbjct: 139 SGGGMASYKYKMLKRRQIKIETEAWEEAAREYQELLEDMREQKLAPNLPYM 189
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 137 bits (346), Expect = 1e-30
Identities = 87/175 (49%), Positives = 112/175 (64%), Gaps = 9/175 (5%)
Frame = +3
Query: 12 KHVASSRN----LMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRN-GVLLSQEEQMGRR 176
K + SS+N + F Q+SI + T+ F I S MG +N G L +E + R
Sbjct: 50 KLLFSSKNRTYSFLGFGQDSIFKDNTK-FRSLIPISCSNIVMGFQNLGEYLPGDEFLSRP 108
Query: 177 NFR--YFRNPISFKGFASVAEAV--SSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQ 344
+ N K +ASVAEAV SSTD EEDVSVVDE+ LL ++ KE+KK F ++
Sbjct: 109 LIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRR 168
Query: 345 KQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
KQ+ L GMG KY L++RQVK+ETEAW+QAA+EYKELL DMC+QKLAPNLPY+
Sbjct: 169 KQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 223
>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
AltName: Full=T7 bacteriophage-type single subunit RNA
polymerase 2; Flags: Precursor
gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 137 bits (346), Expect = 1e-30
Identities = 87/175 (49%), Positives = 112/175 (64%), Gaps = 9/175 (5%)
Frame = +3
Query: 12 KHVASSRN----LMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRN-GVLLSQEEQMGRR 176
K + SS+N + F Q+SI + T+ F I S MG +N G L +E + R
Sbjct: 50 KLLFSSKNRTYSFLGFGQDSIFKDNTK-FRSLIPISCSNIVMGFQNLGEYLPGDEFLSRP 108
Query: 177 NFR--YFRNPISFKGFASVAEAV--SSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQ 344
+ N K +ASVAEAV SSTD EEDVSVVDE+ LL ++ KE+KK F ++
Sbjct: 109 LIKNQVNNNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRR 168
Query: 345 KQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
KQ+ L GMG KY L++RQVK+ETEAW+QAA+EYKELL DMC+QKLAPNLPY+
Sbjct: 169 KQRMLTSGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYV 223
>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
gi|462422319|gb|EMJ26582.1| hypothetical protein
PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 134 bits (336), Expect = 2e-29
Identities = 86/191 (45%), Positives = 114/191 (59%), Gaps = 22/191 (11%)
Frame = +3
Query: 3 NVAKHVAS--------------SRNLMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRN- 137
N+AK VAS S M FSQ S K R FE + + MG R
Sbjct: 4 NLAKQVASRKTNLSSQSHFGSPSSTSMIFSQESSFLDKARHFEARKCINNRILVMGFRQV 63
Query: 138 GVLLSQEEQMGRRNFRYFRNPISF-------KGFASVAEAVSSTDTEEDVSVVDEIQGLL 296
G + SQ+E++GR + P KG+ASVAEA++STD EED S +EIQ +L
Sbjct: 64 GDMASQKEELGRCSSLNPSYPYGISGFCNYAKGYASVAEAIASTDGEEDSSGSEEIQEML 123
Query: 297 EKMSKEDKKFFELGQQKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMC 476
E + +E+ E ++ + +V GMG GKY+LLRKRQ+K+ETEAW +AA+EY+ELL DMC
Sbjct: 124 EDLIRENN-MVESHFKQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLADMC 182
Query: 477 KQKLAPNLPYM 509
+QKLAPNLPY+
Sbjct: 183 EQKLAPNLPYI 193
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 133 bits (335), Expect = 2e-29
Identities = 81/188 (43%), Positives = 119/188 (63%), Gaps = 19/188 (10%)
Frame = +3
Query: 3 NVAKHVASSRNLMRFSQNSIIQK-----------KTRSFELKIQSSFDFSKMGIRN-GVL 146
N+AKH A +R L SQ+S K R+ E + + G+R GVL
Sbjct: 4 NLAKH-AYTRRLQLSSQHSSFSPSNCTSRFYFPDKARALESQDHVNSLRPVAGLRRIGVL 62
Query: 147 LSQEEQMGRRNFRYFRNPISF-------KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKM 305
Q++++GR F + P++F KG+AS AEA++S EED+S VDE+Q L+E++
Sbjct: 63 SFQQDELGRPGFGVTKTPVNFFGLFGYQKGYASAAEAIAS---EEDMSGVDEVQELVEEV 119
Query: 306 SKEDKKFFELGQQKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQK 485
+K DK +KQ L+GG+ GK+++LR+RQ+K+ETEAW++AA+EY+ELL DMC+QK
Sbjct: 120 NKGDKL------EKQPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQK 173
Query: 486 LAPNLPYM 509
LAPNLPY+
Sbjct: 174 LAPNLPYI 181
>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like [Solanum lycopersicum]
Length = 1022
Score = 130 bits (326), Expect = 2e-28
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 10/165 (6%)
Frame = +3
Query: 45 FSQNSIIQKKT--RSFELKIQSSFDFSKMGIRN-GVLLSQEEQMGR-----RNFRYFRNP 200
F +S+ + K RSF S+ F +MG +N G L +E + R + N
Sbjct: 61 FGLHSVFKDKRTLRSFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMKSQVSNND 120
Query: 201 ISFKGFASVAEAV--SSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGMG 374
I K +ASVAEAV SSTD EEDVSVV E+Q LL ++ KE+KK F ++KQ+ L G+
Sbjct: 121 ICRKNYASVAEAVAVSSTDAEEDVSVVGEVQELLTELKKEEKKQFTFRRRKQRMLTSGID 180
Query: 375 PGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
KY L +RQVKIET+AW+QAA+EY+ELL DMC+QKLAPNLPY+
Sbjct: 181 RRKYPALMRRQVKIETQAWEQAAKEYRELLFDMCEQKLAPNLPYV 225
>ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
gi|508709658|gb|EOY01555.1| DNA-directed RNA polymerase
isoform 3 [Theobroma cacao]
Length = 932
Score = 129 bits (325), Expect = 3e-28
Identities = 77/170 (45%), Positives = 108/170 (63%), Gaps = 8/170 (4%)
Frame = +3
Query: 24 SSRNLMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRN-GVLLSQEEQMGRRNFRYFRNP 200
SS + FSQ+S+ K R+ E + + G R GV SQ++ +G+ + +P
Sbjct: 27 SSCSATGFSQDSVFANKVRASEARANGFYGCLFPGFRQIGVFSSQKDDLGKFSLNQPGDP 86
Query: 201 ISF-------KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNL 359
+ F KG+AS AEAV ST EED+S +EI L+E M++E+KK L Q K+ +
Sbjct: 87 LRFSGKFWNLKGYASAAEAVIST--EEDMSGSEEIHELMEAMAREEKKMSFLVQPKK--V 142
Query: 360 VGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
GMG KY+ L+KRQ+KIETEAW++AA+EY+ELL DMC+ KLAPNLPY+
Sbjct: 143 AEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLMDMCEHKLAPNLPYI 192
>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|590698457|ref|XP_007045722.1| DNA-directed RNA
polymerase isoform 1 [Theobroma cacao]
gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 996
Score = 129 bits (325), Expect = 3e-28
Identities = 77/170 (45%), Positives = 108/170 (63%), Gaps = 8/170 (4%)
Frame = +3
Query: 24 SSRNLMRFSQNSIIQKKTRSFELKIQSSFDFSKMGIRN-GVLLSQEEQMGRRNFRYFRNP 200
SS + FSQ+S+ K R+ E + + G R GV SQ++ +G+ + +P
Sbjct: 27 SSCSATGFSQDSVFANKVRASEARANGFYGCLFPGFRQIGVFSSQKDDLGKFSLNQPGDP 86
Query: 201 ISF-------KGFASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNL 359
+ F KG+AS AEAV ST EED+S +EI L+E M++E+KK L Q K+ +
Sbjct: 87 LRFSGKFWNLKGYASAAEAVIST--EEDMSGSEEIHELMEAMAREEKKMSFLVQPKK--V 142
Query: 360 VGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
GMG KY+ L+KRQ+KIETEAW++AA+EY+ELL DMC+ KLAPNLPY+
Sbjct: 143 AEGMGVAKYNTLKKRQIKIETEAWEEAAKEYQELLMDMCEHKLAPNLPYI 192
>ref|XP_006384251.1| hypothetical protein POPTR_0004s11060g [Populus trichocarpa]
gi|550340797|gb|ERP62048.1| hypothetical protein
POPTR_0004s11060g [Populus trichocarpa]
Length = 475
Score = 129 bits (323), Expect = 5e-28
Identities = 68/136 (50%), Positives = 94/136 (69%), Gaps = 10/136 (7%)
Frame = +3
Query: 132 RNGVLLSQEEQMGRRNFRYFRNPISF----------KGFASVAEAVSSTDTEEDVSVVDE 281
R G + + E+ MG+ +F + RN S +G+ SVAEAVSSTD E++V V +E
Sbjct: 95 RIGEISTHEDYMGKPSFGFLRNGDSSNGNLCSGLCPRGYVSVAEAVSSTDVEDNVVVDEE 154
Query: 282 IQGLLEKMSKEDKKFFELGQQKQQNLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKEL 461
+Q LL+ KE++K + ++++ + GMG GKY LR+RQVKIE EAW+QAA+EYKEL
Sbjct: 155 LQELLQDTRKEEEKEKDFRRRRRLHANRGMGSGKYKALRRRQVKIEAEAWEQAAKEYKEL 214
Query: 462 LEDMCKQKLAPNLPYM 509
L+DMC+ KLAPNLPYM
Sbjct: 215 LKDMCEHKLAPNLPYM 230
>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Solanum tuberosum]
Length = 1019
Score = 128 bits (321), Expect = 9e-28
Identities = 79/169 (46%), Positives = 108/169 (63%), Gaps = 10/169 (5%)
Frame = +3
Query: 33 NLMRFSQNSIIQKKT--RSFELKIQSSFDFSKMGIRNGVLLSQEEQMGRRNF------RY 188
+ + F Q+S+ + K RSF S+ F +MG +N L + ++ RR +
Sbjct: 57 SFLGFGQDSVFKDKRILRSFIPVSCSNSGFLEMGFQN---LGEFDEFLRRPLLCAMKSQV 113
Query: 189 FRNPISFKGFASVAEAV--SSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLV 362
N I K +ASVAEAV SSTD EEDVSVV E+Q LL ++ KE+KK F ++ Q+ L
Sbjct: 114 SNNDICRKSYASVAEAVAVSSTDAEEDVSVVGEVQELLTELKKEEKKQFTFRRRNQRLLT 173
Query: 363 GGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
G+ KY L++RQVKIET+AW+ AA+EY+ELL DMC+QKLAPNLPY+
Sbjct: 174 SGIDRRKYPALKRRQVKIETQAWELAAKEYRELLFDMCEQKLAPNLPYV 222
>ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutrema salsugineum]
gi|557101180|gb|ESQ41543.1| hypothetical protein
EUTSA_v10012544mg [Eutrema salsugineum]
Length = 1030
Score = 127 bits (319), Expect = 2e-27
Identities = 78/172 (45%), Positives = 104/172 (60%), Gaps = 9/172 (5%)
Frame = +3
Query: 21 ASSRNLMRFSQNSIIQKKTRSFELKIQSSFDFS---KMGI-RNGVLLSQEEQMGRRNFRY 188
+ +R + SQ S + KK R F + SF S +MG R + EE GR R+
Sbjct: 61 SQTRGFLASSQESSLSKKLR-FRCSVFGSFSDSGCHEMGFSRLSGVTRPEELPGRVGLRF 119
Query: 189 FRNPISFKG-----FASVAEAVSSTDTEEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQ 353
+N F G + SVAE +SSTD EE+ SVVDE+Q LL++M KE K+ + ++
Sbjct: 120 SKNDSYFNGSFARRYTSVAEEISSTDVEEEPSVVDEVQELLKEMKKEQKREDHRSWRMKK 179
Query: 354 NLVGGMGPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
GMG GKY L +RQVKIETE W++AA EY+ELL DMC++KLAPNLPY+
Sbjct: 180 QEHVGMGRGKYRNLWRRQVKIETEEWERAANEYRELLTDMCEKKLAPNLPYV 231
>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Fragaria vesca subsp.
vesca]
Length = 1262
Score = 126 bits (316), Expect = 4e-27
Identities = 65/106 (61%), Positives = 82/106 (77%), Gaps = 6/106 (5%)
Frame = +3
Query: 210 KGFASVAEAVSSTDT------EEDVSVVDEIQGLLEKMSKEDKKFFELGQQKQQNLVGGM 371
KG+ASVAEA+SSTD EE+V VVDE+Q +L++M KEDK+ + +Q V GM
Sbjct: 363 KGYASVAEAISSTDASSSTDAEEEVCVVDELQEILKEMKKEDKRQSAYRWRIEQARVRGM 422
Query: 372 GPGKYHLLRKRQVKIETEAWDQAAREYKELLEDMCKQKLAPNLPYM 509
G GKY +LR+RQ+KIETEAW++AA EY+ELL DMC+QKLAPNLPYM
Sbjct: 423 GEGKYLMLRRRQIKIETEAWERAADEYRELLMDMCEQKLAPNLPYM 468