BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia24_contig00002006
         (1342 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma ...   401   e-109
ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [...   386   e-104
ref|XP_007144255.1| hypothetical protein PHAVU_007G141100g [Phas...   385   e-104
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like i...   385   e-104
gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis]           385   e-104
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [...   384   e-104
emb|CBI31382.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutr...   382   e-103
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [...   382   e-103
ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like i...   380   e-103
ref|XP_006288156.1| hypothetical protein CARUB_v10001394mg [Caps...   380   e-102
ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Popu...   379   e-102
ref|XP_002532622.1| Far upstream element-binding protein, putati...   377   e-102
ref|XP_006843101.1| hypothetical protein AMTR_s00140p00057330 [A...   376   e-101
ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]...   376   e-101
ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arab...   376   e-101
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i...   375   e-101
gb|ABQ23585.1| putative KH-domain containing protein [Medicago t...   374   e-101
ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6...   364   4e-98
ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1...   362   2e-97

>ref|XP_007010064.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
            gi|508726977|gb|EOY18874.1| Binding to TOMV RNA 1L
            isoform 2 [Theobroma cacao]
          Length = 334

 Score =  401 bits (1030), Expect = e-109
 Identities = 211/310 (68%), Positives = 248/310 (80%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P KS  ++  EK T+IRFLVSNAAAGSVIGKGG+TITEFQS+SGARI LSRNHEFFPGTS
Sbjct: 22   PPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFFPGTS 81

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIMISG  +E LKAMELIL+KLL+E++ ED DDV+PR++VRLIVPN            
Sbjct: 82   DRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGA 141

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIEDSQAGIKISPQD+N+ GLNDRLVTL+G+L++QMRAI LILSKL ED HY Q+M
Sbjct: 142  TIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAM 201

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            HAP SYAG  FSGFHG+ Y Y++PSV    Y++M+Y  N AGGKFQN+KE R  S+ IG+
Sbjct: 202  HAPFSYAGIFFSGFHGIPYAYVLPSVATATYNSMSYPSNGAGGKFQNHKEDRSNSVTIGV 261

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
             D HI        RNIMEI+Q++GARIKISDRGDFMSGT+DRKVTITGS  AIR AE++I
Sbjct: 262  ADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMI 321

Query: 316  MQKVASASER 287
            MQKVA A++R
Sbjct: 322  MQKVAYATDR 331


>ref|XP_004307014.1| PREDICTED: RNA-binding protein Nova-2-like [Fragaria vesca subsp.
            vesca]
          Length = 344

 Score =  386 bits (992), Expect = e-104
 Identities = 207/319 (64%), Positives = 247/319 (77%), Gaps = 9/319 (2%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P KS  +D  EKPT++RFLVSNAAAGSVIGKGGATIT+FQSQSGARI LSRNHEFFPGT+
Sbjct: 23   PPKSPASDTTEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNHEFFPGTT 82

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIMISG  NE LKA+EL+L+KLL+E++SE+ +DV+PR+++RLIVPN            
Sbjct: 83   DRIIMISGTINEILKAVELVLAKLLNELYSEESEDVEPRTKLRLIVPNSSCGGIIGKQGS 142

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIE+SQAGIKISPQD+NY G+NDRLVTL+G+L++QMRA  LILSKL EDSHY+QSM
Sbjct: 143  TIKSFIEESQAGIKISPQDNNYFGVNDRLVTLTGTLDEQMRAADLILSKLSEDSHYTQSM 202

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYG-------RNRAGGKFQNNKEGR- 521
            +AP SY G  FSGFHG+ Y Y++PSV   AY+ ++YG        N A GKFQNNKE R 
Sbjct: 203  NAPFSYPGVFFSGFHGIPYTYVLPSVSTAAYNAVSYGPPPPNGPPNGAAGKFQNNKEDRN 262

Query: 520  -GKSMVIGINDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLA 344
               S+ IG+ D HI        R IMEI+Q +GARIKISDRGDFMSGT+DRKVTITGS  
Sbjct: 263  NNNSVTIGVADSHIGLVVGRGGRTIMEISQGSGARIKISDRGDFMSGTTDRKVTITGSQR 322

Query: 343  AIRAAETIIMQKVASASER 287
            +I+ AET+IMQKV  ASER
Sbjct: 323  SIQVAETMIMQKVNYASER 341


>ref|XP_007144255.1| hypothetical protein PHAVU_007G141100g [Phaseolus vulgaris]
            gi|561017445|gb|ESW16249.1| hypothetical protein
            PHAVU_007G141100g [Phaseolus vulgaris]
          Length = 335

 Score =  385 bits (990), Expect = e-104
 Identities = 203/313 (64%), Positives = 245/313 (78%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P KS   D +EKPT+IRFLVSN+AAGSVIGKGG+TITEFQSQSGARI LSRNHEFFPGT+
Sbjct: 23   PPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITEFQSQSGARIQLSRNHEFFPGTT 82

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIM+SG  NE L A+ LILSKLLSE+H+ED ++ +P+++VRLIVPN            
Sbjct: 83   DRIIMVSGAINEILTAVGLILSKLLSELHTEDDNEAEPKTKVRLIVPNGSCGGIIGKGGA 142

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIEDSQAGIKISPQD+NY G NDRLVTL+G+LE+Q+RAI LI+SKL ED  YSQSM
Sbjct: 143  TIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGTLEEQIRAIELIVSKLAEDPQYSQSM 202

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            ++P SY G  FSG+ GV Y Y++PSV   AY+ +NY  N AG KFQN+KE R  SM +G+
Sbjct: 203  NSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAGAKFQNSKEERSNSMTMGV 262

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
             DEHI        RNI+EI+QV+GARIKISDRGD++SGT+DRKVTITG+  AIR AE++I
Sbjct: 263  ADEHIGLVVGRGGRNIIEISQVSGARIKISDRGDYISGTTDRKVTITGAQRAIRTAESMI 322

Query: 316  MQKVASASERESE 278
            +QKVA A+ER  E
Sbjct: 323  LQKVAYATERVIE 335


>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Glycine max]
          Length = 337

 Score =  385 bits (990), Expect = e-104
 Identities = 202/311 (64%), Positives = 244/311 (78%), Gaps = 1/311 (0%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P KS   D +EKPT+IRFLVSN+AAGSVIGKGG+TIT+FQSQSGARI LSRNHEFFPGT+
Sbjct: 23   PPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTT 82

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIM+SG  NE  +A+ELILSKLLSE+HSED +D +P+++VRL+VPN            
Sbjct: 83   DRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGA 142

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIEDSQAGIKISPQD+NY G NDRLVTL+GS ++QMRAI LI+SKL ED HY+QSM
Sbjct: 143  TIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSM 202

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRN-RAGGKFQNNKEGRGKSMVIG 500
            ++P SY G  FSG+ GV Y Y++PSV   AY+ +NY  N  AGGK QN+KE R  S+ +G
Sbjct: 203  NSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMG 262

Query: 499  INDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETI 320
            + DEHI        RNIMEI+Q +GARIKISDRGD++SGT+DRKVTITGS  AIR AE++
Sbjct: 263  VADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESM 322

Query: 319  IMQKVASASER 287
            I+QKVA A+ER
Sbjct: 323  ILQKVAYATER 333


>gb|EXB39447.1| RNA-binding protein Nova-1 [Morus notabilis]
          Length = 349

 Score =  385 bits (989), Expect = e-104
 Identities = 202/316 (63%), Positives = 245/316 (77%)
 Frame = -1

Query: 1225 RAVPIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFP 1046
            ++ P  +   +  E+P +I+FLVSNAAAGSVIGKGGATIT+FQS+SGARI LSRNHEFFP
Sbjct: 34   KSTPALTDPLESMERPAYIKFLVSNAAAGSVIGKGGATITDFQSKSGARIQLSRNHEFFP 93

Query: 1045 GTSDRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXX 866
            GT+DRIIMISG  NE +KAMEL+L+KLLSE+ +E+ +DVDPR ++RL+VPN         
Sbjct: 94   GTTDRIIMISGAINEIIKAMELVLAKLLSELQTEEENDVDPRKKLRLVVPNGSCGGIIGK 153

Query: 865  XXXXXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYS 686
                  SFIE+SQAGIKISPQD+NY G+NDRLVTL+G+L++QMRAI LILSKL ED HY+
Sbjct: 154  GGSTIKSFIEESQAGIKISPQDNNYLGINDRLVTLTGTLDEQMRAIDLILSKLAEDPHYT 213

Query: 685  QSMHAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMV 506
            QSM+AP SY  G FSG HG  Y +++PSV   +Y+   YG N AGGKFQNNKE R  S+ 
Sbjct: 214  QSMNAPFSYP-GVFSGIHGTPYPHVLPSVATASYNQTGYGPNGAGGKFQNNKEDRSNSVT 272

Query: 505  IGINDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAE 326
            IG+ D HI        RNIMEI+Q +GARIKISDRGDF+SGT+DRKVTITGS  AI AAE
Sbjct: 273  IGVADGHIGFVVGRGGRNIMEISQASGARIKISDRGDFLSGTTDRKVTITGSQRAICAAE 332

Query: 325  TIIMQKVASASERESE 278
            ++IMQKVA ASER +E
Sbjct: 333  SMIMQKVAYASERIAE 348


>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
          Length = 309

 Score =  384 bits (986), Expect = e-104
 Identities = 211/314 (67%), Positives = 237/314 (75%)
 Frame = -1

Query: 1228 KRAVPIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFF 1049
            KR+ P +S  +D  EK T+IRFLVSNAAAGSVIGKGG+TI +FQSQSGARI LSRNHEFF
Sbjct: 17   KRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 76

Query: 1048 PGTSDRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXX 869
            PGTSDRIIMISG  NE +KAMELIL+KLLSE+H+EDGD+ DPRS+VRLIVPN        
Sbjct: 77   PGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIG 136

Query: 868  XXXXXXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHY 689
                   SFIEDSQA IKISPQD+NY GL DRLVTL GSLE+QMRAI LILSKL ED HY
Sbjct: 137  KGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHY 196

Query: 688  SQSMHAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSM 509
            +Q M+AP SY                     A AY++MNYG N AGGKFQNNKE R  S+
Sbjct: 197  TQFMNAPFSY---------------------AAAYNSMNYGPNGAGGKFQNNKEDRSNSV 235

Query: 508  VIGINDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAA 329
             IG+ DEHI        RNIM+I+Q +GARIKISDRGDFMSGT+DRKVTITGS  AIRAA
Sbjct: 236  TIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAA 295

Query: 328  ETIIMQKVASASER 287
            E++IMQKVASASER
Sbjct: 296  ESMIMQKVASASER 309


>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score =  384 bits (986), Expect = e-104
 Identities = 211/314 (67%), Positives = 237/314 (75%)
 Frame = -1

Query: 1228 KRAVPIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFF 1049
            KR+ P +S  +D  EK T+IRFLVSNAAAGSVIGKGG+TI +FQSQSGARI LSRNHEFF
Sbjct: 65   KRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 124

Query: 1048 PGTSDRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXX 869
            PGTSDRIIMISG  NE +KAMELIL+KLLSE+H+EDGD+ DPRS+VRLIVPN        
Sbjct: 125  PGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIG 184

Query: 868  XXXXXXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHY 689
                   SFIEDSQA IKISPQD+NY GL DRLVTL GSLE+QMRAI LILSKL ED HY
Sbjct: 185  KGGSTIKSFIEDSQASIKISPQDNNYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDPHY 244

Query: 688  SQSMHAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSM 509
            +Q M+AP SY                     A AY++MNYG N AGGKFQNNKE R  S+
Sbjct: 245  TQFMNAPFSY---------------------AAAYNSMNYGPNGAGGKFQNNKEDRSNSV 283

Query: 508  VIGINDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAA 329
             IG+ DEHI        RNIM+I+Q +GARIKISDRGDFMSGT+DRKVTITGS  AIRAA
Sbjct: 284  TIGVADEHIGLVVGRGGRNIMDISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAA 343

Query: 328  ETIIMQKVASASER 287
            E++IMQKVASASER
Sbjct: 344  ESMIMQKVASASER 357


>ref|XP_006398902.1| hypothetical protein EUTSA_v10014068mg [Eutrema salsugineum]
            gi|557099992|gb|ESQ40355.1| hypothetical protein
            EUTSA_v10014068mg [Eutrema salsugineum]
          Length = 334

 Score =  382 bits (982), Expect = e-103
 Identities = 199/313 (63%), Positives = 239/313 (76%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P  SS AD  EKPTHIRFLVSNAAAGSVIGKGG+TITEFQ++SGARI LSRN EFFPGT+
Sbjct: 22   PHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIMISG   E +  +ELIL KL SE+H+EDG+DV+PR  +RL+VPN            
Sbjct: 82   DRIIMISGSIKEVVNGLELILDKLHSELHAEDGNDVEPRRRIRLVVPNSSCGGIIGKGGA 141

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIE+S+AGIKISP D+ Y GL+DRLVTLSG+ E+QMRAI LIL+KL  D HYSQ++
Sbjct: 142  TIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILAKLTSDDHYSQNV 201

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            H+P SYAG  +SGFHG  Y Y++PSV    Y+++NY  N +GGK+QN+KE    +  IG+
Sbjct: 202  HSPYSYAGLFYSGFHGHPYAYVLPSVATAGYNSVNYAPNGSGGKYQNHKEEASTTKTIGV 261

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
            +DEHI        RNIMEI Q+TGARIKISDRGDFMSGT+DRKV+ITGS  AI+ AET+I
Sbjct: 262  SDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGSQRAIQQAETMI 321

Query: 316  MQKVASASERESE 278
             QKV SASER +E
Sbjct: 322  KQKVDSASERATE 334


>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [Glycine max]
          Length = 337

 Score =  382 bits (980), Expect = e-103
 Identities = 200/311 (64%), Positives = 243/311 (78%), Gaps = 1/311 (0%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P K    D +EKPT+IRFLVSN+AAGSVIGKGG+TIT+FQSQSGARI LSRNHEFFPGT+
Sbjct: 23   PPKPPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTT 82

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIM+SG  NE  +A+ELILSKLLSE+HSED +D +P+++VRL+VPN            
Sbjct: 83   DRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGV 142

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIEDSQAGIKISPQD+NY G NDRLV L+G+ ++QMRAI LI+SKL ED HY+QSM
Sbjct: 143  TIRSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYAQSM 202

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRN-RAGGKFQNNKEGRGKSMVIG 500
            ++P SY G  FSG+ GV Y Y++PSV   AY+ +NY  N  AGGK QN+KE R  S+ +G
Sbjct: 203  NSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGTAGGKLQNSKEERSNSLTMG 262

Query: 499  INDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETI 320
            + DEHI        RNIMEI+QV+GARIKISDRGD++SGT+DRKVTITGS  AIR AE++
Sbjct: 263  VADEHIGLVVGRGGRNIMEISQVSGARIKISDRGDYISGTTDRKVTITGSQRAIRTAESM 322

Query: 319  IMQKVASASER 287
            I+QKVA A+ER
Sbjct: 323  ILQKVAYATER 333


>ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Cicer
            arietinum]
          Length = 337

 Score =  380 bits (976), Expect = e-103
 Identities = 200/314 (63%), Positives = 247/314 (78%), Gaps = 1/314 (0%)
 Frame = -1

Query: 1216 PIKSSIADDK-EKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGT 1040
            P KS   DD  EKPT++RFLVSN+AAGSVIGKGG+TIT+FQSQSGARI LSRN+EFFPGT
Sbjct: 24   PPKSPSQDDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGT 83

Query: 1039 SDRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXX 860
            +DRIIM+SG  NE L+A+ELILSKLL+E+HSED +DV+P+++VRLIVPN           
Sbjct: 84   TDRIIMVSGAINEILRAVELILSKLLTELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGG 143

Query: 859  XXXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQS 680
                SFIEDSQAGIKISPQD++Y G NDR+V+++G+L++QMRA+ LI+SKL ED HYSQS
Sbjct: 144  ATIRSFIEDSQAGIKISPQDNSYYGQNDRIVSVTGTLDEQMRAVDLIVSKLAEDPHYSQS 203

Query: 679  MHAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIG 500
            M++P SY+G    G+ GV Y Y++PSV   AY+++NY  N A GKFQN+KE R  SM IG
Sbjct: 204  MNSPFSYSGVYVPGYQGVPYTYVLPSVAPPAYNSVNYRPNGAAGKFQNSKEERSNSMTIG 263

Query: 499  INDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETI 320
            I DEHI        RNI +I QV+GA+IKISDRGD++SGT+DRKVTITGS  AIR AE++
Sbjct: 264  IADEHIGLVVGRGGRNIADITQVSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESM 323

Query: 319  IMQKVASASERESE 278
            IMQKVA A+ER  E
Sbjct: 324  IMQKVAYATERVVE 337



 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 35/93 (37%), Positives = 54/93 (58%)
 Frame = -1

Query: 1228 KRAVPIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFF 1049
            K    + S   +D E  T +R +V N + G +IGKGGATI  F   S A I +S     +
Sbjct: 107  KLLTELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNSY 166

Query: 1048 PGTSDRIIMISGGFNETLKAMELILSKLLSEVH 950
             G +DRI+ ++G  +E ++A++LI+SKL  + H
Sbjct: 167  YGQNDRIVSVTGTLDEQMRAVDLIVSKLAEDPH 199


>ref|XP_006288156.1| hypothetical protein CARUB_v10001394mg [Capsella rubella]
            gi|482556862|gb|EOA21054.1| hypothetical protein
            CARUB_v10001394mg [Capsella rubella]
          Length = 334

 Score =  380 bits (975), Expect = e-102
 Identities = 196/313 (62%), Positives = 240/313 (76%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P  SS AD  EKPTHIRFLVSNAAAGSVIGKGG+TITEFQ++SGARI LSRN EFFPGT+
Sbjct: 22   PHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIMISG   E +  +ELIL KL SE+H+EDG++V+PR  +RL+VPN            
Sbjct: 82   DRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGA 141

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIE+S+AGIKISP D+ Y GL+DRLVTLSG+ E+QMRAI LIL+KL ED HYSQ++
Sbjct: 142  TIKSFIEESKAGIKISPLDNTYYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNV 201

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            H+P SYAG  +SGFHG  Y Y++PSV    Y+++NY  N +GGK+QN+KE    ++ IG+
Sbjct: 202  HSPYSYAGLFYSGFHGPPYAYVLPSVATAGYNSVNYAPNGSGGKYQNHKEEPSNTVTIGV 261

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
            +DEHI        RNIMEI Q+TGARIKISDRGDF+SGTSDRKV+ITG   AI+ AET+I
Sbjct: 262  SDEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFISGTSDRKVSITGPQRAIQQAETMI 321

Query: 316  MQKVASASERESE 278
             QKV SA+ER ++
Sbjct: 322  KQKVESATERATD 334


>ref|XP_002316405.1| hypothetical protein POPTR_0010s23710g [Populus trichocarpa]
            gi|222865445|gb|EEF02576.1| hypothetical protein
            POPTR_0010s23710g [Populus trichocarpa]
          Length = 334

 Score =  379 bits (972), Expect = e-102
 Identities = 198/313 (63%), Positives = 241/313 (76%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P  S  +D +EKPT+ RFLVSNAAAGSVIGKGGATIT+FQSQSGARI LSRN+EFFPGTS
Sbjct: 22   PPASPPSDSEEKPTYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTS 81

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIM+SGG ++ LKA+ELI++KLLSE+ +EDGD+ +PR  VRL+VPN            
Sbjct: 82   DRIIMVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIGKGGS 141

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIE+S AGIKISP D  + GL DRLVT++G+LE+QM AI LILSKL +D HYSQ+M
Sbjct: 142  IIKSFIEESHAGIKISPLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDPHYSQTM 201

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            HAP SYAG  FSGF G+ Y  ++P V   AY++MN+G N A  KFQ+NK+    S+ IG+
Sbjct: 202  HAPFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGPNGAAVKFQHNKDDITNSVTIGV 261

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
             DEHI        RNIMEI+Q +GAR+KISDRGDFMSGT+DRK+TITGS  AIRAAE +I
Sbjct: 262  ADEHIGLVVGRGGRNIMEISQTSGARLKISDRGDFMSGTTDRKITITGSQRAIRAAEDMI 321

Query: 316  MQKVASASERESE 278
            MQKV+ ASERE++
Sbjct: 322  MQKVSYASERETD 334


>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
            gi|223527642|gb|EEF29753.1| Far upstream element-binding
            protein, putative [Ricinus communis]
          Length = 314

 Score =  377 bits (967), Expect = e-102
 Identities = 203/313 (64%), Positives = 238/313 (76%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P KS  +D  EKPT++RFLVSNAAAGSVIGKGGATIT+FQSQSGARI LSRN+EFFPGTS
Sbjct: 23   PPKSPTSDSVEKPTYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTS 82

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRII+ISG  ++ LK +EL+L+KLLSE+H+EDGDDVDPR++VRL+VPN            
Sbjct: 83   DRIILISGILDDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGS 142

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIE+SQAGIKISPQD+N+ GLNDRLVT++G+LE+QMRAI LILSKL +D HY Q+M
Sbjct: 143  IIKSFIEESQAGIKISPQDNNFYGLNDRLVTVTGTLEEQMRAIDLILSKLYDDPHYVQTM 202

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            HAP SY                     AVAY++MNYG N AGGKFQNNKE R  S+ IG+
Sbjct: 203  HAPFSY---------------------AVAYNSMNYGANGAGGKFQNNKEDRTNSVTIGV 241

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
             D HI        RNIMEI+QV+GARIKISDRGDFMSGT+DRK+ ITGS  AIR AE +I
Sbjct: 242  ADAHIGLVVGRGGRNIMEISQVSGARIKISDRGDFMSGTNDRKIIITGSQRAIRTAEGMI 301

Query: 316  MQKVASASERESE 278
            MQKVA ASER S+
Sbjct: 302  MQKVAYASERGSD 314


>ref|XP_006843101.1| hypothetical protein AMTR_s00140p00057330 [Amborella trichopoda]
            gi|548845311|gb|ERN04776.1| hypothetical protein
            AMTR_s00140p00057330 [Amborella trichopoda]
          Length = 355

 Score =  376 bits (966), Expect = e-101
 Identities = 201/334 (60%), Positives = 243/334 (72%), Gaps = 20/334 (5%)
 Frame = -1

Query: 1228 KRAVPIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFF 1049
            KR+     +  D+KEKP  +RFLVSNAAAGSVIGKGG+TITEFQSQSGARI LSRNHE+F
Sbjct: 22   KRSTNPNPTSPDNKEKPASVRFLVSNAAAGSVIGKGGSTITEFQSQSGARIQLSRNHEYF 81

Query: 1048 PGTSDRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXX 869
            PGT+DRIIMISG  +E L AM+ ILSKL SE+H+EDGDDVDPR ++RLIVPN        
Sbjct: 82   PGTTDRIIMISGTVDEILTAMDFILSKLQSELHNEDGDDVDPRLKLRLIVPNSGCGGIIG 141

Query: 868  XXXXXXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHY 689
                   SFIE+S AGIKISPQDH Y G++DRLVT++GSLE+Q++A+ LI+SKL+ED HY
Sbjct: 142  KAGSTIKSFIENSHAGIKISPQDHGYVGMSDRLVTITGSLEEQLQAVSLIISKLIEDPHY 201

Query: 688  SQSMHAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNK------- 530
            SQ  ++PLSY G NFSG HGV  GY++P VG VAY+ +NYG N  GGK++NNK       
Sbjct: 202  SQWANSPLSYTGVNFSGLHGVPVGYVLPPVGPVAYNLINYGSNGVGGKYKNNKGLIPPVM 261

Query: 529  ---EGRG----------KSMVIGINDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFM 389
               +  G           S+ +G+ DEHI        R++MEI QV+GARIKISDRGDF+
Sbjct: 262  ALRQSSGPQDGPSNSVPNSITLGVGDEHIGAVVGRGGRSVMEIMQVSGARIKISDRGDFI 321

Query: 388  SGTSDRKVTITGSLAAIRAAETIIMQKVASASER 287
            SGTSDRKVTITGS  AI  AE +I Q+VAS SER
Sbjct: 322  SGTSDRKVTITGSSEAIHTAEAMIQQRVASVSER 355


>ref|NP_850764.1| TOMV RNA binding protein [Arabidopsis thaliana]
            gi|332003360|gb|AED90743.1| TOMV RNA binding protein
            [Arabidopsis thaliana]
          Length = 334

 Score =  376 bits (966), Expect = e-101
 Identities = 195/313 (62%), Positives = 238/313 (76%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P  SS AD  EKPTHIRFLVSNAAAGSVIGKGG+TITEFQ++SGARI LSRN EFFPGT+
Sbjct: 22   PHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIMISG   E +  +ELIL KL SE+H+EDG++V+PR  +RL+VPN            
Sbjct: 82   DRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGA 141

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIE+S+AGIKISP D+ + GL+DRLVTLSG+ E+QMRAI LIL+KL ED HYSQ++
Sbjct: 142  TIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNV 201

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            H+P SYAG  +SGFHG  Y Y +PSV    Y+++NY  N +GGK+QN+KE    ++ IG+
Sbjct: 202  HSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKEEASTTVTIGV 261

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
             DEHI        RNIMEI Q+TGARIKISDRGDFMSGT+DRKV+ITG   AI+ AET+I
Sbjct: 262  ADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMI 321

Query: 316  MQKVASASERESE 278
             QKV SA+ER ++
Sbjct: 322  KQKVDSATERTTD 334


>ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
            lyrata] gi|297318987|gb|EFH49409.1| hypothetical protein
            ARALYDRAFT_487225 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  376 bits (966), Expect = e-101
 Identities = 194/313 (61%), Positives = 238/313 (76%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P  SS AD  EKPTHIRFLVSNAAAGSVIGKGG+TITEFQ++SGARI LSRN EFFPGT+
Sbjct: 22   PHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTT 81

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIMISG   E +  +ELIL KL SE+H+EDG++V+PR  +RL+VPN            
Sbjct: 82   DRIIMISGSIKEVINGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGA 141

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIE+S+AGIKISP D+ + GL+DRLVTLSG+ E+QMRAI LIL+KL ED HYSQ++
Sbjct: 142  TIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNV 201

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            H+P SYAG  +SGFHG  Y Y +PSV    Y+++NY  N +GGK+QN+K+    ++ IG+
Sbjct: 202  HSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKDEASTTVTIGV 261

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
             DEHI        RNIMEI Q+TGARIKISDRGDFMSGT+DRKV+ITG   AI+ AET+I
Sbjct: 262  ADEHIGLVLGRGGRNIMEITQITGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMI 321

Query: 316  MQKVASASERESE 278
             QKV SA+ER ++
Sbjct: 322  KQKVDSATERATD 334


>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
          Length = 332

 Score =  375 bits (963), Expect = e-101
 Identities = 199/311 (63%), Positives = 241/311 (77%), Gaps = 1/311 (0%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P KS   D +EKPT+IRFLVSN+AAGSVIGKGG+TIT+FQSQSGARI LSRNHEFFPGT+
Sbjct: 23   PPKSPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTT 82

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIM+SG  NE  +A+ELILSKLLSE+HSED +D +P+++VRL+VPN            
Sbjct: 83   DRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGA 142

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIEDSQAGIKISPQD+NY G NDRLVTL+GS ++QMRAI LI+SKL ED HY+QSM
Sbjct: 143  TIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYAQSM 202

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRN-RAGGKFQNNKEGRGKSMVIG 500
            ++P SY      G+ GV Y Y++PSV   AY+ +NY  N  AGGK QN+KE R  S+ +G
Sbjct: 203  NSPFSY-----PGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMG 257

Query: 499  INDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETI 320
            + DEHI        RNIMEI+Q +GARIKISDRGD++SGT+DRKVTITGS  AIR AE++
Sbjct: 258  VADEHIGLVVGRGGRNIMEISQASGARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESM 317

Query: 319  IMQKVASASER 287
            I+QKVA A+ER
Sbjct: 318  ILQKVAYATER 328


>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
          Length = 334

 Score =  374 bits (959), Expect = e-101
 Identities = 193/310 (62%), Positives = 240/310 (77%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P  S   D  EKPT++RFLVSN+AAGSVIGKGG+TIT+FQSQSGARI LSRN+EFFPGT+
Sbjct: 23   PPDSPSQDSVEKPTYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTT 82

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIM+SG  NE L+A+ELILSKLLSE+HSED +DV+P+++VRLIVPN            
Sbjct: 83   DRIIMVSGAINEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGA 142

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIE+SQAGIKISPQD++Y G NDR+VT++G+L++QMR I LI+SKL ED HYS SM
Sbjct: 143  TIRSFIEESQAGIKISPQDNSYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYSHSM 202

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
             +P +Y+G   SG+ GV Y Y++PSV   AY+ +NY  N  G KFQN+KE R  SM IG+
Sbjct: 203  SSPFTYSGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRPNGTGAKFQNSKEDRSNSMTIGV 262

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
             DEHI        RNI +I+Q +GA+IKISDRGD++SGT+DRKVTITGS  AIR AE++I
Sbjct: 263  ADEHIGLVVGRGGRNISDISQTSGAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMI 322

Query: 316  MQKVASASER 287
            +QKVA A+ER
Sbjct: 323  LQKVAYATER 332


>ref|XP_007010068.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
            gi|508726981|gb|EOY18878.1| Binding to TOMV RNA 1L (long
            form) isoform 6 [Theobroma cacao]
          Length = 314

 Score =  364 bits (935), Expect = 4e-98
 Identities = 200/310 (64%), Positives = 234/310 (75%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P KS  ++  EK T+IRFLVSNAAAGSVIGKGG+TITEFQS+SGARI LSRNHEFFPGTS
Sbjct: 22   PPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFFPGTS 81

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIMISG  +E LKAMELIL+KLL+E++ ED DDV+PR++VRLIVPN            
Sbjct: 82   DRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGA 141

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIEDSQAGIKISPQD+N+ GLNDRLVTL+G+L++QMRAI LILSKL ED HY Q+M
Sbjct: 142  TIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAM 201

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            HAP SYA                    A  Y++M+Y  N AGGKFQN+KE R  S+ IG+
Sbjct: 202  HAPFSYA--------------------AATYNSMSYPSNGAGGKFQNHKEDRSNSVTIGV 241

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
             D HI        RNIMEI+Q++GARIKISDRGDFMSGT+DRKVTITGS  AIR AE++I
Sbjct: 242  ADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMI 301

Query: 316  MQKVASASER 287
            MQKVA A++R
Sbjct: 302  MQKVAYATDR 311


>ref|XP_007010063.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
            gi|590565855|ref|XP_007010065.1| Binding to TOMV RNA 1L
            (long form) isoform 1 [Theobroma cacao]
            gi|590565859|ref|XP_007010066.1| Binding to TOMV RNA 1L
            (long form) isoform 1 [Theobroma cacao]
            gi|508726976|gb|EOY18873.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
            gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
            gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
            form) isoform 1 [Theobroma cacao]
          Length = 313

 Score =  362 bits (930), Expect = 2e-97
 Identities = 199/310 (64%), Positives = 233/310 (75%)
 Frame = -1

Query: 1216 PIKSSIADDKEKPTHIRFLVSNAAAGSVIGKGGATITEFQSQSGARIILSRNHEFFPGTS 1037
            P KS  ++  EK T+IRFLVSNAAAGSVIGKGG+TITEFQS+SGARI LSRNHEFFPGTS
Sbjct: 22   PPKSPTSETAEKHTYIRFLVSNAAAGSVIGKGGSTITEFQSKSGARIQLSRNHEFFPGTS 81

Query: 1036 DRIIMISGGFNETLKAMELILSKLLSEVHSEDGDDVDPRSEVRLIVPNXXXXXXXXXXXX 857
            DRIIMISG  +E LKAMELIL+KLL+E++ ED DDV+PR++VRLIVPN            
Sbjct: 82   DRIIMISGTIDEVLKAMELILAKLLNELNIEDNDDVEPRTKVRLIVPNSSCGSIIGKGGA 141

Query: 856  XXXSFIEDSQAGIKISPQDHNYTGLNDRLVTLSGSLEDQMRAIFLILSKLMEDSHYSQSM 677
               SFIEDSQAGIKISPQD+N+ GLNDRLVTL+G+L++QMRAI LILSKL ED HY Q+M
Sbjct: 142  TIKSFIEDSQAGIKISPQDNNFYGLNDRLVTLTGTLDEQMRAIDLILSKLSEDPHYLQAM 201

Query: 676  HAPLSYAGGNFSGFHGVAYGYLVPSVGAVAYDTMNYGRNRAGGKFQNNKEGRGKSMVIGI 497
            HAP SY                     A  Y++M+Y  N AGGKFQN+KE R  S+ IG+
Sbjct: 202  HAPFSY---------------------AATYNSMSYPSNGAGGKFQNHKEDRSNSVTIGV 240

Query: 496  NDEHIXXXXXXXXRNIMEINQVTGARIKISDRGDFMSGTSDRKVTITGSLAAIRAAETII 317
             D HI        RNIMEI+Q++GARIKISDRGDFMSGT+DRKVTITGS  AIR AE++I
Sbjct: 241  ADGHIGLVLGRGGRNIMEISQLSGARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMI 300

Query: 316  MQKVASASER 287
            MQKVA A++R
Sbjct: 301  MQKVAYATDR 310