BLASTX nr result
ID: Akebia23_contig00062482
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia23_contig00062482 (324 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAC28197.1| contains similarity to reverse transcriptases [Ar... 61 1e-07 ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298... 61 1e-07 gb|AAD15377.1| putative non-LTR retroelement reverse transcripta... 60 2e-07 emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 60 4e-07 gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 10003... 59 5e-07 emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga... 59 7e-07 ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 57 8e-07 pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 59 9e-07 ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 58 2e-06 gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thali... 55 2e-06 pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7)... 55 2e-06 gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon... 57 4e-06 emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 56 6e-06 gb|AAX95129.1| retrotransposon protein, putative, unclassified [... 55 8e-06 gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japo... 55 8e-06 gb|ABA91837.2| retrotransposon protein, putative, unclassified [... 55 8e-06 >gb|AAC28197.1| contains similarity to reverse transcriptases [Arabidopsis thaliana] gi|7267156|emb|CAB77868.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 1077 Score = 61.2 bits (147), Expect = 1e-07 Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 3/63 (4%) Frame = -3 Query: 310 KKNSHHRDLRPCKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIHEAIN 140 +K S +R + C V YKIIAK+LA RLQPIL IS NQ AF+P+R N I HEA++ Sbjct: 475 QKVSDYRPIALCSVYYKIIAKLLAKRLQPILHSCISENQSAFVPQRAISDNVLITHEALH 534 Query: 139 SMK 131 +K Sbjct: 535 YLK 537 >ref|XP_004310201.1| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca subsp. vesca] Length = 1164 Score = 61.2 bits (147), Expect = 1e-07 Identities = 30/52 (57%), Positives = 37/52 (71%), Gaps = 3/52 (5%) Frame = -3 Query: 316 KEKKNSHHRDLRP---CKVTYKIIAKILANRLQPILKKIISPNQCAFIPRRH 170 K K H LRP C V YK+ +K+LANRL+PILK +I+PNQ AF+PRRH Sbjct: 454 KVKVVEHITQLRPISLCNVLYKLGSKVLANRLKPILKSVIAPNQSAFVPRRH 505 >gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1044 Score = 60.5 bits (145), Expect = 2e-07 Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 3/63 (4%) Frame = -3 Query: 310 KKNSHHRDLRPCKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIHEAIN 140 K+ +R + C V YKII+K+L+ RLQPIL++IIS NQ AF+P+R N I HEA++ Sbjct: 325 KRMVDYRPIALCTVFYKIISKLLSRRLQPILQEIISENQSAFVPKRASNDNVLITHEALH 384 Query: 139 SMK 131 +K Sbjct: 385 YLK 387 >emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1378 Score = 59.7 bits (143), Expect = 4e-07 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 3/59 (5%) Frame = -3 Query: 298 HHRDLRPCKVTYKIIAKILANRLQPILKKIISPNQCAFIPRRH---NTQIIHEAINSMK 131 H R + C + YKI+ K++ NRL+PIL +ISP QC+F+P R N I+ E +SM+ Sbjct: 510 HFRPIGLCNIVYKIVTKVIINRLKPILPSLISPTQCSFVPNRQITDNVIIVQEMFHSMR 568 >gb|AAG51754.1|AC068667_33 reverse transcriptase, putative; 100033-105622 [Arabidopsis thaliana] Length = 1557 Score = 59.3 bits (142), Expect = 5e-07 Identities = 31/67 (46%), Positives = 41/67 (61%), Gaps = 6/67 (8%) Frame = -3 Query: 313 EKKNSHHRDLRP---CKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIH 152 +KK DLRP C V YKII+KI+ RLQP L ++SPNQ AF+P R N I H Sbjct: 856 QKKPDKMTDLRPISLCSVMYKIISKIMVKRLQPFLPDLVSPNQSAFVPDRLISDNILIAH 915 Query: 151 EAINSMK 131 E ++ ++ Sbjct: 916 EVVHGLR 922 >emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1365 Score = 58.9 bits (141), Expect = 7e-07 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 3/57 (5%) Frame = -3 Query: 292 RDLRPCKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIHEAINSMK 131 R + C V YKII+KI+ANRL+PILK I++P Q AF+P R N I HE +N +K Sbjct: 518 RPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFVPGRLISDNCLIAHEVVNLIK 574 >ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis] Length = 2303 Score = 57.4 bits (137), Expect(2) = 8e-07 Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 3/65 (4%) Frame = -3 Query: 316 KEKKNSHHRDLRPCKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIHEA 146 K KK + R + C V Y+I+AK +ANRL+PIL +IISP Q AFIP R N I +E Sbjct: 475 KPKKVTEFRPISLCNVIYRIVAKTIANRLKPILSQIISPTQSAFIPNRLISDNVIIGYEC 534 Query: 145 INSMK 131 ++ ++ Sbjct: 535 LHKIR 539 Score = 21.2 bits (43), Expect(2) = 8e-07 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 9/39 (23%) Frame = -2 Query: 125 KSGCIALE---------TEWDILLKVNESMDLSEKWCRL 36 K G +AL+ EW L + + + S KW L Sbjct: 545 KKGLVALKLDISKAYDRVEWTFLKQTMKKLGFSRKWLEL 583 >pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1| reverse transcriptase [Arabidopsis thaliana] Length = 1333 Score = 58.5 bits (140), Expect = 9e-07 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 6/68 (8%) Frame = -3 Query: 316 KEKKNSHHRDLRP---CKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQII 155 K+KK DLRP C V YKII+KI+ RLQP L ++SPNQ AF+ R N I Sbjct: 496 KKKKPDKMTDLRPISLCSVLYKIISKIMVRRLQPFLPDLVSPNQSAFVAERLIFDNILIA 555 Query: 154 HEAINSMK 131 HE ++ ++ Sbjct: 556 HEVVHGLR 563 >ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis] Length = 1452 Score = 57.8 bits (138), Expect = 2e-06 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 3/66 (4%) Frame = -3 Query: 319 KKEKKNSHHRDLRPCKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIHE 149 +K +K R + C V Y+I+AK +ANRL+PIL IISPNQ AFIP R N I +E Sbjct: 591 EKPRKVMEFRPISLCNVVYRIVAKAIANRLKPILNHIISPNQSAFIPNRLITDNVIIGYE 650 Query: 148 AINSMK 131 ++ ++ Sbjct: 651 CLHKIR 656 >gb|AAB48344.1| reverse transcriptase, partial [Arabidopsis thaliana] Length = 199 Score = 55.1 bits (131), Expect(2) = 2e-06 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 3/63 (4%) Frame = -3 Query: 310 KKNSHHRDLRPCKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIHEAIN 140 +K +R + C V YKII+K+L+ RLQP+L+ I+S N AF+P+R N I HE ++ Sbjct: 55 QKMVDYRPIALCTVFYKIISKLLSKRLQPVLQDIVSENHSAFVPKRAITDNVLITHEVLH 114 Query: 139 SMK 131 +K Sbjct: 115 YLK 117 Score = 21.9 bits (45), Expect(2) = 2e-06 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -2 Query: 98 EWDILLKVNESMDLSEKW 45 EWD + V E M KW Sbjct: 141 EWDFIRLVMEKMGFHPKW 158 >pir||S65818 RNA-directed DNA polymerase (EC 2.7.7.49) (clone N7) - Arabidopsis thaliana retrotransposon Ta20 (fragment) Length = 184 Score = 55.1 bits (131), Expect(2) = 2e-06 Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 3/63 (4%) Frame = -3 Query: 310 KKNSHHRDLRPCKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIHEAIN 140 +K +R + C V YKII+K+L+ RLQP+L+ I+S N AF+P+R N I HE ++ Sbjct: 49 QKMVDYRPIALCTVFYKIISKLLSKRLQPVLQDIVSENHSAFVPKRAITDNVLITHEVLH 108 Query: 139 SMK 131 +K Sbjct: 109 YLK 111 Score = 21.9 bits (45), Expect(2) = 2e-06 Identities = 8/18 (44%), Positives = 9/18 (50%) Frame = -2 Query: 98 EWDILLKVNESMDLSEKW 45 EWD + V E M KW Sbjct: 135 EWDFIRLVMEKMGFHPKW 152 >gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon Ta11-1 [Arabidopsis thaliana] Length = 220 Score = 56.6 bits (135), Expect = 4e-06 Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 6/59 (10%) Frame = -3 Query: 289 DLRP---CKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIHEAINSMK 131 DLRP C V YK+I+KIL +RL+PIL ++SP Q AF+ R NT I HE ++S++ Sbjct: 3 DLRPISLCSVMYKVISKILVSRLKPILADLVSPTQSAFVEERLISDNTLIAHEIVHSLR 61 >emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1362 Score = 55.8 bits (133), Expect = 6e-06 Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 6/60 (10%) Frame = -3 Query: 292 RDLRP---CKVTYKIIAKILANRLQPILKKIISPNQCAFIPRR---HNTQIIHEAINSMK 131 +D RP C V YKI++K LANRL+ IL IISPNQ AF+PRR N + E ++MK Sbjct: 505 KDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPRRLITDNALVAFEIFHAMK 564 >gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] gi|62733115|gb|AAX95232.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1324 Score = 55.5 bits (132), Expect = 8e-06 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 3/49 (6%) Frame = -3 Query: 292 RDLRP---CKVTYKIIAKILANRLQPILKKIISPNQCAFIPRRHNTQII 155 +DLRP C V YKI +K+LANRL+P+L +IISP Q AF+P+R T I Sbjct: 959 KDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMITDNI 1007 >gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group] Length = 825 Score = 55.5 bits (132), Expect = 8e-06 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 3/49 (6%) Frame = -3 Query: 292 RDLRP---CKVTYKIIAKILANRLQPILKKIISPNQCAFIPRRHNTQII 155 +DLRP C V YKI +K+LANRL+P+L +IISP Q AF+P+R T I Sbjct: 460 KDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMITDNI 508 >gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1301 Score = 55.5 bits (132), Expect = 8e-06 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 3/49 (6%) Frame = -3 Query: 292 RDLRP---CKVTYKIIAKILANRLQPILKKIISPNQCAFIPRRHNTQII 155 +DLRP C V YKI +K+LANRL+P+L +IISP Q AF+P+R T I Sbjct: 936 KDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMITDNI 984