BLASTX nr result
ID: Akebia23_contig00061340
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00061340
(250 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 92 6e-17
gb|ABG22123.1| polyprotein [Prunus avium] 92 7e-17
emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera] 85 9e-15
gb|ABG22121.1| polyprotein [Solanum melongena] 84 2e-14
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 82 8e-14
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo... 82 1e-13
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 82 1e-13
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] 80 3e-13
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 80 4e-13
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-... 79 5e-13
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 79 5e-13
ref|XP_004229099.1| PREDICTED: uncharacterized protein LOC101259... 79 6e-13
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 79 6e-13
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 79 8e-13
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 78 1e-12
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 78 1e-12
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 78 1e-12
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 78 1e-12
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 78 1e-12
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 78 1e-12
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 92.4 bits (228), Expect = 6e-17
Identities = 44/83 (53%), Positives = 58/83 (69%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL+K+ ST+GYVFT+GGG V WR EAEYIA T+ KEAIWL GL+ DL
Sbjct: 153 GDLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDL 212
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
G++ +N+ +FC++ +AI L KNQ
Sbjct: 213 GVIQENIAVFCDNQSAIFLAKNQ 235
>gb|ABG22123.1| polyprotein [Prunus avium]
Length = 276
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/83 (53%), Positives = 58/83 (69%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL+KR ST G+VFT+ GGPV WR EAEY+AVT+ KEAIWL GL++DL
Sbjct: 182 GDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLDDL 241
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
G+ +V+++C+S +AI L KNQ
Sbjct: 242 GVQQDHVDVYCDSQSAIYLAKNQ 264
>emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]
Length = 726
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +2
Query: 5 DLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDLG 184
DL+ R ST GYVFT+GGGP+CW+ E+EY+A+ K KE++WL GLV++LG
Sbjct: 646 DLDDRRSTTGYVFTLGGGPICWKSIIQSLVALFTAESEYMAIAKAVKESLWLIGLVKELG 705
Query: 185 IV*KNVEIFCNS*NAICLTKN 247
I V+++C+S +AI L KN
Sbjct: 706 IQQGGVQLYCDSQSAIYLAKN 726
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/83 (49%), Positives = 56/83 (67%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL+KR ST GY+FT+ GPV W+ EAEY+A+T+ KEAIWLHGL+E+L
Sbjct: 267 GDLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAITEAVKEAIWLHGLLEEL 326
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
G+ K++ + +S +AI L KNQ
Sbjct: 327 GVGQKHLMVHSDSQSAIHLAKNQ 349
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 82.0 bits (201), Expect = 8e-14
Identities = 42/83 (50%), Positives = 54/83 (65%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL++R ST GYVFT GGGPV W+ EAEY+A+T+ KEAIWL+GL L
Sbjct: 1159 GDLDRRRSTAGYVFTCGGGPVSWKATLQAVTALSTTEAEYMALTEASKEAIWLNGLAGQL 1218
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
G+ + V + C+S +AI L KNQ
Sbjct: 1219 GVHQEGVVVKCDSQSAIHLAKNQ 1241
>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1822
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/83 (49%), Positives = 55/83 (66%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL+KR S +GY+FT+ G V W+ EAEYIA T+ KEA+WL GL+ +L
Sbjct: 537 GDLDKRRSLSGYIFTLFGCTVSWKAQLQLVVALSTTEAEYIAATEGVKEAMWLKGLIGEL 596
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
GIV VE+FC++ ++I LTKNQ
Sbjct: 597 GIVQDEVEVFCDNQSSILLTKNQ 619
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +2
Query: 5 DLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDLG 184
DL+KR S +GYVFT+GG V W+ +AE+IA+T+ KEAIW+ GL+ED+G
Sbjct: 1167 DLDKRRSISGYVFTVGGNTVSWKSSLQHVVALSSTQAEFIALTEAVKEAIWIRGLLEDMG 1226
Query: 185 IV*KNVEIFCNS*NAICLTKN 247
+ K ++C+S +AICL+KN
Sbjct: 1227 LQPKPATVWCDSQSAICLSKN 1247
>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
Length = 406
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/83 (44%), Positives = 57/83 (68%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL++R ST GYVFT+GGGP+CW+ ++EY+A+ + KE++WL GLV++L
Sbjct: 268 GDLDERRSTIGYVFTLGGGPICWKSMIQSLVALYTTKSEYMAIAETTKESLWLTGLVKEL 327
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
GI V+++ ++ +AI L KNQ
Sbjct: 328 GIQQGGVQLYFDNQSAIYLEKNQ 350
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +2
Query: 5 DLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDLG 184
DL+KR S G VFT+GG + W+ E EY+++T+ KEAIWL GL++D G
Sbjct: 1221 DLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSSTECEYMSLTEAVKEAIWLKGLLKDFG 1280
Query: 185 IV*KNVEIFCNS*NAICLTKN 247
KNVEIFC+S +AI L+KN
Sbjct: 1281 YEQKNVEIFCDSQSAIALSKN 1301
>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549746|gb|ABA92543.1|
retrotransposon protein, putative, Ty1-copia subclass,
expressed [Oryza sativa Japonica Group]
Length = 1170
Score = 79.3 bits (194), Expect = 5e-13
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDLN+R S YVFT+GG V W+ EAEY+A+++ KEAIWL GL +L
Sbjct: 1028 GDLNRRRSLTDYVFTIGGCAVSWKTSLQAIVALSTTEAEYMAISEACKEAIWLRGLYTEL 1087
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
V + IFCNS +AICLTK+Q
Sbjct: 1088 CGVMSCINIFCNSQSAICLTKDQ 1110
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL+KR ST GY+FT+ GGPV W+ +AEYIA T+ KEA+WL GLV++L
Sbjct: 629 GDLDKRXSTTGYIFTLFGGPVSWKSQLQSIVALSTTKAEYIAATEAMKEALWLQGLVKEL 688
Query: 182 GIV*KNVEIFCNS*NAICLTKN 247
++ VEIF +S +AI L N
Sbjct: 689 XVLNSVVEIFLDSQSAIQLCNN 710
>ref|XP_004229099.1| PREDICTED: uncharacterized protein LOC101259364 [Solanum
lycopersicum]
Length = 505
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GD++ R S GYVFT+GG V W+ EAEY+A+T+ KE IWL GLV DL
Sbjct: 367 GDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAVKEGIWLKGLVSDL 426
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
G+ ++C+S +AICL K+Q
Sbjct: 427 GLHHDQATVYCDSLSAICLAKDQ 449
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 79.0 bits (193), Expect = 6e-13
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +2
Query: 5 DLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDLG 184
DL++R S +GYVFT+GG V W+ EAEYIA+ + KEA+W+ GL++D+G
Sbjct: 1213 DLDRRRSISGYVFTIGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMG 1272
Query: 185 IV*KNVEIFCNS*NAICLTKN 247
+ V+I+C+S +AICL+KN
Sbjct: 1273 MQQDKVKIWCDSQSAICLSKN 1293
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GD++ R S GYVFT+GG V W+ EAEY+A+T+ KE IWL GLV DL
Sbjct: 1167 GDVDTRRSMTGYVFTLGGSVVSWKATLQPTVTLSTTEAEYMALTEAAKEGIWLKGLVSDL 1226
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
G+ ++C+S +AICL K+Q
Sbjct: 1227 GLHHDQATVYCDSLSAICLAKDQ 1249
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/83 (48%), Positives = 53/83 (63%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL++R S GYVFT+GG V W+ EAEY+A+++ KEAIWL GL +L
Sbjct: 1138 GDLDRRRSLTGYVFTIGGCDVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTEL 1197
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
V + IFC+S +AICLTK+Q
Sbjct: 1198 CGVTSCINIFCDSQSAICLTKDQ 1220
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/83 (48%), Positives = 53/83 (63%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL++R S GYVFT+GG V W+ EAEY+A+++ KEAIWL GL +L
Sbjct: 1039 GDLDRRRSLTGYVFTIGGCAVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTEL 1098
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
V + IFC+S +AICLTK+Q
Sbjct: 1099 CGVTSCINIFCDSQSAICLTKDQ 1121
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +2
Query: 5 DLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDLG 184
DL++R S +GYVFT+GG V W+ EAE++A+T+ KEA+W+ GL++DLG
Sbjct: 444 DLDRRRSVSGYVFTVGGNTVSWKANLQSVTALSTTEAEFMALTEAAKEALWIKGLMKDLG 503
Query: 185 IV*KNVEIFCNS*NAICLTKN 247
+ V ++C+S +AICL+KN
Sbjct: 504 LEQDKVTLWCDSQSAICLSKN 524
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/83 (48%), Positives = 53/83 (63%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL++R S GYVFT+GG V W+ EAEY+A+++ KEAIWL GL +L
Sbjct: 1170 GDLDRRRSLTGYVFTIGGCDVSWKASLQATVALSTTEAEYMAISEACKEAIWLRGLYTEL 1229
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
V + IFC+S +AICLTK+Q
Sbjct: 1230 CGVTSCINIFCDSQSAICLTKDQ 1252
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/83 (48%), Positives = 53/83 (63%)
Frame = +2
Query: 2 GDLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDL 181
GDL++R S YVFT+GG V W+ EA+Y+A++KV KE+IWL GL +L
Sbjct: 483 GDLDRRRSLTSYVFTIGGCAVSWKASLQATVALSTTEADYMAISKVCKESIWLKGLYTEL 542
Query: 182 GIV*KNVEIFCNS*NAICLTKNQ 250
V + IFC+S +AICLTKNQ
Sbjct: 543 CGVTSCINIFCDSQSAICLTKNQ 565
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = +2
Query: 5 DLNKR*STNGYVFTMGGGPVCWRXXXXXXXXXXXXEAEYIAVTKVFKEAIWLHGLVEDLG 184
DL+KR S G VFT+GG + W+ E+EY+++T+ KEAIWL GL++D G
Sbjct: 1214 DLDKRRSITGLVFTLGGNTISWKSGLQRVVAQSTTESEYMSLTEAVKEAIWLKGLLKDFG 1273
Query: 185 IV*KNVEIFCNS*NAICLTKN 247
K+VEIFC+S +AI L+KN
Sbjct: 1274 YEQKSVEIFCDSQSAIALSKN 1294