BLASTX nr result
ID: Akebia23_contig00060085
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00060085
(321 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006372280.1| hypothetical protein POPTR_0018s14930g [Popu... 57 4e-08
ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containi... 54 3e-06
gb|EXB38821.1| Serine acetyltransferase 5 [Morus notabilis] 54 4e-06
ref|XP_003620888.1| Pentatricopeptide repeat-containing protein ... 54 4e-06
ref|XP_004289184.1| PREDICTED: pentatricopeptide repeat-containi... 52 5e-06
ref|XP_003620912.1| Pentatricopeptide repeat-containing protein ... 54 5e-06
ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selag... 47 8e-06
ref|XP_004955321.1| PREDICTED: pentatricopeptide repeat-containi... 52 8e-06
ref|XP_003620907.1| Pentatricopeptide repeat-containing protein ... 54 8e-06
ref|XP_003620812.1| Pentatricopeptide repeat-containing protein ... 54 8e-06
>ref|XP_006372280.1| hypothetical protein POPTR_0018s14930g [Populus trichocarpa]
gi|550318811|gb|ERP50077.1| hypothetical protein
POPTR_0018s14930g [Populus trichocarpa]
Length = 618
Score = 57.0 bits (136), Expect(2) = 4e-08
Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Frame = +1
Query: 25 EDGYVAQIEMVMHDLEKEE--DALRVHSEGLALEFRLLSTEPCSILRIMNNLST 180
E GYV + + V+HDLE+EE +AL+VHSE LA+ F L+STE S LRIM N T
Sbjct: 524 EAGYVPETDTVIHDLEREEKEEALKVHSERLAIAFGLISTEAGSTLRIMKNHRT 577
Score = 26.2 bits (56), Expect(2) = 4e-08
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTG 241
ITG LIV +G +FH F +G
Sbjct: 591 ITGRHLIVRDGSRFHHFESG 610
>ref|XP_003561500.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Brachypodium distachyon]
Length = 892
Score = 53.9 bits (128), Expect(2) = 3e-06
Identities = 27/53 (50%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Frame = +1
Query: 22 REDGYVAQIEMVMHDLEK--EEDALRVHSEGLALEFRLLSTEPCSILRIMNNL 174
+E G+V Q E+V+HDL++ +E AL VHSE LAL F L+ST+P + ++I+ NL
Sbjct: 797 KEHGHVPQTELVLHDLDEATKEKALAVHSEKLALAFGLISTQPGATIKIVKNL 849
Score = 22.7 bits (47), Expect(2) = 3e-06
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTGSYS 250
ITG +++ + ++FH F GS S
Sbjct: 865 ITGRKIVFRDRNRFHHFVDGSCS 887
>gb|EXB38821.1| Serine acetyltransferase 5 [Morus notabilis]
Length = 819
Score = 54.3 bits (129), Expect(2) = 4e-06
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +1
Query: 1 EGFTAEHREDGYVAQIEMVMHDLEKE--EDALRVHSEGLALEFRLLSTEPCSILRIMNNL 174
+G + RE GYV V+HD+++E E AL+ HSE LA+ + L+ST P + LRIM NL
Sbjct: 717 KGLNGQLREAGYVPDTRYVLHDIDEEAKEQALQYHSERLAIAYGLISTPPRTTLRIMKNL 776
Score = 21.9 bits (45), Expect(2) = 4e-06
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTGSYS 250
I G LIV + +FH F G S
Sbjct: 792 IVGRELIVRDNKRFHHFKDGKCS 814
>ref|XP_003620888.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495903|gb|AES77106.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 446
Score = 54.3 bits (129), Expect(2) = 4e-06
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +1
Query: 4 GFTAEHREDGYVAQIEMVMHDLEKEED--ALRVHSEGLALEFRLLSTEPCSILRIMNNL 174
G T + RE GYV V+HD+++EE AL+ HSE LA+ + L+ST P + LRI+ NL
Sbjct: 345 GLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNL 403
Score = 21.9 bits (45), Expect(2) = 4e-06
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTGSYS 250
I G LIV + +FH F G S
Sbjct: 419 IVGRELIVRDNKRFHHFKDGKCS 441
>ref|XP_004289184.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 619
Score = 52.0 bits (123), Expect(2) = 5e-06
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = +1
Query: 22 REDGYVAQIEMVMHDLEKEEDA--LRVHSEGLALEFRLLSTEPCSILRIMNNL 174
+ DGY Q E V+HDL + E A L VHSE LA+ F L+ST+P + L+I+ NL
Sbjct: 524 KADGYTPQTETVLHDLGEREKAQSLEVHSEKLAIAFGLISTQPGTTLKIVKNL 576
Score = 23.9 bits (50), Expect(2) = 5e-06
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTGSYS 250
ITG ++++ + ++FH F GS S
Sbjct: 592 ITGRKIVMRDRNRFHHFVNGSCS 614
>ref|XP_003620912.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495927|gb|AES77130.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 415
Score = 53.9 bits (128), Expect(2) = 5e-06
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +1
Query: 4 GFTAEHREDGYVAQIEMVMHDLEKEED--ALRVHSEGLALEFRLLSTEPCSILRIMNNL 174
G T + RE GYV V+HD+++EE AL+ HSE LA+ + L+ST P + LRI+ NL
Sbjct: 314 GLTGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSECLAIAYGLISTPPRTTLRIIKNL 372
Score = 21.9 bits (45), Expect(2) = 5e-06
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTGSYS 250
I G LIV + +FH F G S
Sbjct: 388 IVGRELIVRDNKRFHHFKDGKCS 410
>ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein
SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 47.4 bits (111), Expect(2) = 8e-06
Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +1
Query: 22 REDGYVAQIEMVMHDLEKE--EDALRVHSEGLALEFRLLSTEPCSILRIMNNL 174
RE GYV +MV+HD+++E E L HSE LA+ F L+ST S L I NL
Sbjct: 841 REAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNL 893
Score = 27.7 bits (60), Expect(2) = 8e-06
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTGSYS 250
ITG ++V + H+FH F GS S
Sbjct: 909 ITGREIVVRDNHRFHHFRDGSCS 931
>ref|XP_004955321.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Setaria italica]
Length = 633
Score = 52.4 bits (124), Expect(2) = 8e-06
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Frame = +1
Query: 22 REDGYVAQIEMVMHDLEK--EEDALRVHSEGLALEFRLLSTEPCSILRIMNNL 174
RE G+V Q E+V+HDL++ +E AL VHSE LA+ F L+ST P ++I+ NL
Sbjct: 538 REHGHVPQTELVLHDLDEAAKEKALAVHSEKLAVAFGLISTPPGETIKIVKNL 590
Score = 22.7 bits (47), Expect(2) = 8e-06
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTGSYS 250
ITG R++ + ++FH F G+ S
Sbjct: 606 ITGRRIVFRDRNRFHHFVDGACS 628
>ref|XP_003620907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495922|gb|AES77125.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 468
Score = 53.9 bits (128), Expect(2) = 8e-06
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Frame = +1
Query: 10 TAEHREDGYVAQIEMVMHDLEKEED--ALRVHSEGLALEFRLLSTEPCSILRIMNNL 174
T + RE GYV V+HD+++EE ALR HSE LA+ + L+ST P ++LRI+ NL
Sbjct: 332 TGQIREAGYVPDTRYVLHDIDEEEKEKALRYHSERLAIAYGLISTPPRTMLRIIKNL 388
Score = 21.2 bits (43), Expect(2) = 8e-06
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTG 241
I G +LIV + +FH F G
Sbjct: 404 IVGMKLIVRDNKRFHHFKDG 423
>ref|XP_003620812.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495827|gb|AES77030.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 468
Score = 53.9 bits (128), Expect(2) = 8e-06
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Frame = +1
Query: 10 TAEHREDGYVAQIEMVMHDLEKEED--ALRVHSEGLALEFRLLSTEPCSILRIMNNL 174
T + RE GYV V+HD+++EE ALR HSE LA+ + L+ST P ++LRI+ NL
Sbjct: 332 TGQIREAGYVPDTRYVLHDIDEEEKEKALRYHSERLAIAYGLISTPPRTMLRIIKNL 388
Score = 21.2 bits (43), Expect(2) = 8e-06
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 182 ITGNRLIVINGHQFHQFGTG 241
I G +LIV + +FH F G
Sbjct: 404 IVGMKLIVRDNKRFHHFKDG 423