BLASTX nr result

ID: Akebia23_contig00058707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00058707
         (269 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007046316.1| Pentatricopeptide repeat (PPR) superfamily p...    60   3e-07
ref|XP_002523226.1| pentatricopeptide repeat-containing protein,...    56   5e-06

>ref|XP_007046316.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508710251|gb|EOY02148.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 478

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/36 (72%), Positives = 34/36 (94%)
 Frame = +2

Query: 2   LSNIYAASGRFNDAERVRDAMKERNVSKIPGCSLIE 109
           LSNIYAA+G+F+DAE+VR+ MK++NVSK+PGCS IE
Sbjct: 432 LSNIYAAAGKFDDAEKVREFMKDKNVSKVPGCSSIE 467


>ref|XP_002523226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537522|gb|EEF39147.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 488

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/36 (63%), Positives = 33/36 (91%)
 Frame = +2

Query: 2   LSNIYAASGRFNDAERVRDAMKERNVSKIPGCSLIE 109
           L+N+YA  GRF++AE VRD+M+E+N+SK+PGCSL+E
Sbjct: 448 LANMYAGVGRFHEAEMVRDSMQEKNMSKVPGCSLLE 483


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