BLASTX nr result

ID: Akebia23_contig00058587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00058587
         (436 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    60   4e-07
emb|CCH50976.1| T4.15 [Malus x robusta]                                57   2e-06

>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
 Frame = -3

Query: 191 GSAIHRIRAG*VKWRYATRVICHQCI-RQTKRKFLKTAVRLIMFNGTEC*AIK-KHVHRL 18
           G   HRI+AG +KW+ A+ V+C +C+  + K KF +T +R  M  GTEC A+K +HVH++
Sbjct: 38  GDLNHRIQAGWMKWKSASGVLCDRCMPLKLKGKFYRTTIRPAMLYGTECWAVKYQHVHKM 97

Query: 17  DVVEM 3
            V EM
Sbjct: 98  GVAEM 102


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 56.6 bits (135), Expect(2) = 2e-06
 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
 Frame = -3

Query: 191  GSAIHRIRAG*VKWRYATRVICHQCIR-QTKRKFLKTAVRLIMFNGTEC*AIK-KHVHRL 18
            G   HRI+AG +KW+ A+ V+C + +  + K KF +TA+R  M  GTEC A+K +HVH++
Sbjct: 812  GDLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKM 871

Query: 17   DVVEM 3
             V EM
Sbjct: 872  GVAEM 876



 Score = 20.8 bits (42), Expect(2) = 2e-06
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 253 VPLKDDFHYVSYIVHEHGE 197
           +P  D F Y+  I+ ++GE
Sbjct: 791 IPKSDRFRYLGSILQKNGE 809


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