BLASTX nr result
ID: Akebia23_contig00058587
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia23_contig00058587 (436 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEJ72569.1| putative reverse transcriptase family member [Mal... 60 4e-07 emb|CCH50976.1| T4.15 [Malus x robusta] 57 2e-06 >gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica] Length = 212 Score = 59.7 bits (143), Expect = 4e-07 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Frame = -3 Query: 191 GSAIHRIRAG*VKWRYATRVICHQCI-RQTKRKFLKTAVRLIMFNGTEC*AIK-KHVHRL 18 G HRI+AG +KW+ A+ V+C +C+ + K KF +T +R M GTEC A+K +HVH++ Sbjct: 38 GDLNHRIQAGWMKWKSASGVLCDRCMPLKLKGKFYRTTIRPAMLYGTECWAVKYQHVHKM 97 Query: 17 DVVEM 3 V EM Sbjct: 98 GVAEM 102 >emb|CCH50976.1| T4.15 [Malus x robusta] Length = 986 Score = 56.6 bits (135), Expect(2) = 2e-06 Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 2/65 (3%) Frame = -3 Query: 191 GSAIHRIRAG*VKWRYATRVICHQCIR-QTKRKFLKTAVRLIMFNGTEC*AIK-KHVHRL 18 G HRI+AG +KW+ A+ V+C + + + K KF +TA+R M GTEC A+K +HVH++ Sbjct: 812 GDLNHRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKM 871 Query: 17 DVVEM 3 V EM Sbjct: 872 GVAEM 876 Score = 20.8 bits (42), Expect(2) = 2e-06 Identities = 7/19 (36%), Positives = 12/19 (63%) Frame = -1 Query: 253 VPLKDDFHYVSYIVHEHGE 197 +P D F Y+ I+ ++GE Sbjct: 791 IPKSDRFRYLGSILQKNGE 809