BLASTX nr result

ID: Akebia23_contig00056563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00056563
         (370 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004295380.1| PREDICTED: uncharacterized protein LOC101310...    58   1e-06
gb|ADP88721.1| reverse transcriptase [Fragaria vesca]                  58   1e-06
gb|ACZ36933.1| reverse transcriptase, partial [Prunus mume]            57   3e-06
gb|ABF57079.1| reverse transcriptase [Prunus mume]                     57   3e-06
gb|ABF57078.1| reverse transcriptase [Prunus mume]                     57   3e-06
gb|ADP88727.1| reverse transcriptase [Fragaria orientalis]             56   6e-06

>ref|XP_004295380.1| PREDICTED: uncharacterized protein LOC101310880 [Fragaria vesca
            subsp. vesca]
          Length = 3881

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = -2

Query: 153  LHQEVNMPPPPSFSHTGENIGCRIKKSLYMLKQVSKN*FNNFIYGLQTIGF 1
            L +EV M PPP +   GEN+ CR+ KSLY LKQ S++ F  F Y +Q IGF
Sbjct: 2670 LLEEVYMLPPPGYRRQGENLVCRLHKSLYGLKQASRSWFQRFSYAIQAIGF 2720


>gb|ADP88721.1| reverse transcriptase [Fragaria vesca]
          Length = 87

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = -2

Query: 153 LHQEVNMPPPPSFSHTGENIGCRIKKSLYMLKQVSKN*FNNFIYGLQTIGF 1
           L +EV M PPP +   GEN+ CR+ KSLY LKQ S++ F  F Y +Q IGF
Sbjct: 8   LLEEVYMLPPPGYRRQGENLVCRLHKSLYGLKQASRSWFQRFSYAIQAIGF 58


>gb|ACZ36933.1| reverse transcriptase, partial [Prunus mume]
          Length = 86

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = -2

Query: 153 LHQEVNMPPPPSFSHTGENIGCRIKKSLYMLKQVSKN*FNNFIYGLQTIGF 1
           LH+E+ M PPP     GE++ CR+ KSLY LKQVS+  F+ F   +Q  GF
Sbjct: 8   LHEEIYMSPPPGLRRQGEHLVCRLHKSLYELKQVSRQWFSKFTEAIQATGF 58


>gb|ABF57079.1| reverse transcriptase [Prunus mume]
          Length = 87

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = -2

Query: 153 LHQEVNMPPPPSFSHTGENIGCRIKKSLYMLKQVSKN*FNNFIYGLQTIGF 1
           LH+E+ M PPP     GE++ CR+ KSLY LKQVS+  F+ F   +Q  GF
Sbjct: 8   LHEEIYMSPPPGLRRQGEHLVCRLHKSLYELKQVSRQWFSKFTEAIQATGF 58


>gb|ABF57078.1| reverse transcriptase [Prunus mume]
          Length = 86

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 33/51 (64%)
 Frame = -2

Query: 153 LHQEVNMPPPPSFSHTGENIGCRIKKSLYMLKQVSKN*FNNFIYGLQTIGF 1
           LH+E+ M PPP     GE++ CR+ KSLY LKQVS+  F+ F   +Q  GF
Sbjct: 8   LHEEIYMSPPPGLRRQGEHLVCRLHKSLYELKQVSRQWFSKFTEAIQATGF 58


>gb|ADP88727.1| reverse transcriptase [Fragaria orientalis]
          Length = 87

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = -2

Query: 153 LHQEVNMPPPPSFSHTGENIGCRIKKSLYMLKQVSKN*FNNFIYGLQTIGF 1
           L +EV M PPP +S  GEN+ CR+ KSLY LKQ S++ F  F   +Q IGF
Sbjct: 8   LTEEVYMLPPPGYSRQGENMVCRLHKSLYGLKQASRSWFQRFHSAIQEIGF 58


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