BLASTX nr result

ID: Akebia23_contig00055172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00055172
         (470 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...    61   2e-07
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...    61   2e-07
ref|XP_006367809.1| PREDICTED: uncharacterized protein LOC102582...    56   5e-06
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    56   5e-06

>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 YALDGEPY-TLFSNRFRKINEEGWHPHLGHPQQKIVYHLGYKKFIFFDSENKNDCICESC 33
           Y L   P+ T +S R +  ++E WH  LGHP ++++ HL   K I  +  + N  +CE+C
Sbjct: 438 YVLKDVPFQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSN--MCEAC 495

Query: 32  QLGKSCRLPF 3
           Q+GK CRLPF
Sbjct: 496 QMGKVCRLPF 505


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7267767|emb|CAB81170.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1515

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 YALDGEPY-TLFSNRFRKINEEGWHPHLGHPQQKIVYHLGYKKFIFFDSENKNDCICESC 33
           Y L   P+ T +S R +  ++E WH  LGHP ++++ HL   K I  +  + N  +CE+C
Sbjct: 435 YVLKDVPFQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIVVNKTSSN--MCEAC 492

Query: 32  QLGKSCRLPF 3
           Q+GK CRLPF
Sbjct: 493 QMGKVCRLPF 502


>ref|XP_006367809.1| PREDICTED: uncharacterized protein LOC102582397, partial [Solanum
           tuberosum]
          Length = 794

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/47 (53%), Positives = 28/47 (59%)
 Frame = -1

Query: 143 WHPHLGHPQQKIVYHLGYKKFIFFDSENKNDCICESCQLGKSCRLPF 3
           WH  LGHP  K +  L    FI   S NK   +C SCQLGKSC+LPF
Sbjct: 716 WHTKLGHPSLKYLKVLSSNSFINISSWNKMPTVCSSCQLGKSCKLPF 762


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = -1

Query: 209 YALDGEPYT-LFSNRFRKINEEGWHPHLGHPQQKIVYHLGYKKFIFFDSENKNDCICESC 33
           Y L+ + +  L+SNR     EE WH  LGH   K + HL   K I   ++++   +CE C
Sbjct: 433 YVLENQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQI-NKSRTSPVCEPC 491

Query: 32  QLGKSCRLPF 3
           Q+GKS RLPF
Sbjct: 492 QMGKSSRLPF 501


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