BLASTX nr result

ID: Akebia23_contig00055115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00055115
         (284 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304651.2| hypothetical protein POPTR_0003s16330g [Popu...    70   2e-10
ref|XP_002297867.2| hypothetical protein POPTR_0001s13220g [Popu...    70   3e-10
ref|XP_007043836.1| RING finger protein, putative [Theobroma cac...    59   5e-07
emb|CBI38190.3| unnamed protein product [Vitis vinifera]               59   7e-07
emb|CAN84063.1| hypothetical protein VITISV_040487 [Vitis vinifera]    59   7e-07

>ref|XP_002304651.2| hypothetical protein POPTR_0003s16330g [Populus trichocarpa]
           gi|550343310|gb|EEE79630.2| hypothetical protein
           POPTR_0003s16330g [Populus trichocarpa]
          Length = 293

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 18/109 (16%)
 Frame = +3

Query: 3   GRLIELDLLPGSTNSTQH-----------VMEFRAPPRLLAPNRISDTSITTPLFLQNPR 149
           G LIELDLL GS++   H           V +FRAPPR + P+  ++ S T+  F  +P 
Sbjct: 87  GGLIELDLLRGSSSRISHQARPLSSPVFHVPDFRAPPRPV-PSHATNFSNTSLFFQHHPA 145

Query: 150 -TSLSFPNYSEIPWGYRPNLWNPTQASSS------SLVPLGQYYSQPFQ 275
            TS ++P + EI W +RP L N   ASSS      SL+PLG Y+S+PFQ
Sbjct: 146 ATSSTYPLHQEINWPFRPMLHNIATASSSPPSSSSSLMPLGSYFSRPFQ 194


>ref|XP_002297867.2| hypothetical protein POPTR_0001s13220g [Populus trichocarpa]
           gi|550347147|gb|EEE82672.2| hypothetical protein
           POPTR_0001s13220g [Populus trichocarpa]
          Length = 341

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 23/114 (20%)
 Frame = +3

Query: 3   GRLIELDLLPGSTNSTQH-----------VMEFRAPPRL---LAPNRISDTSITTPLFLQ 140
           G LIELDLLPGS +S  H           V +FR PPR    +A +  ++   T+  F  
Sbjct: 136 GGLIELDLLPGSISSISHQARPLSTPMFHVPDFRTPPRPVMNIAASHATNFGTTSLFFQH 195

Query: 141 NPR-TSLSFPNYSEIPWGYRPNLWNPTQASSS--------SLVPLGQYYSQPFQ 275
           +P  TS ++P + EI W +RP L N   ASSS        SL+PLG Y+S+PFQ
Sbjct: 196 HPAATSSTYPLHQEINWPFRPMLHNIATASSSYSPSSSSSSLMPLGSYFSRPFQ 249


>ref|XP_007043836.1| RING finger protein, putative [Theobroma cacao]
           gi|508707771|gb|EOX99667.1| RING finger protein,
           putative [Theobroma cacao]
          Length = 342

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 13/106 (12%)
 Frame = +3

Query: 3   GRLIELDLLPGSTNS-------TQHVMEFRAP-PRLLAPNRISDTSITTPLFLQNPRTSL 158
           G LIELDLLPG ++        T ++ EFRAP P ++        S +T LF Q+ + S 
Sbjct: 117 GGLIELDLLPGGSSQQARPLAPTFNMPEFRAPRPPVMH-------SFSTSLFFQHQQGSS 169

Query: 159 SFPNYSEIPWGYRPNLWN-----PTQASSSSLVPLGQYYSQPFQHQ 281
           S     EI W +RP   N      + +SSSSLVPLG ++++PFQ Q
Sbjct: 170 STFPQGEINWAFRPISQNIAAAPSSSSSSSSLVPLGSHFARPFQVQ 215


>emb|CBI38190.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 16/107 (14%)
 Frame = +3

Query: 3   GRLIELDLLPGSTNSTQ---------HVMEFRAPPRLLAPNRISD--TSITTPLFLQN-- 143
           G ++EL+LLPG + S Q         H+ +FR PP    P  I++   S +T LFLQ   
Sbjct: 114 GGMVELNLLPGRSGSQQGRPLGPIIHHLPDFRPPP----PRPITNITNSFSTSLFLQQQQ 169

Query: 144 PRTSLSFPNYSEIPWGYR---PNLWNPTQASSSSLVPLGQYYSQPFQ 275
           P  + +FP+  +I W +R    N+ + + ++SSS +P   Y++ PFQ
Sbjct: 170 PGAASNFPHLQDINWAFRHIPQNITSASSSTSSSFIPQAPYFATPFQ 216


>emb|CAN84063.1| hypothetical protein VITISV_040487 [Vitis vinifera]
          Length = 341

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 16/107 (14%)
 Frame = +3

Query: 3   GRLIELDLLPGSTNSTQ---------HVMEFRAPPRLLAPNRISD--TSITTPLFLQN-- 143
           G ++EL+LLPG + S Q         H+ +FR PP    P  I++   S +T LFLQ   
Sbjct: 114 GGMVELNLLPGRSGSQQGRPLGPIIHHLPDFRPPP----PRPITNITNSFSTSLFLQQQQ 169

Query: 144 PRTSLSFPNYSEIPWGYR---PNLWNPTQASSSSLVPLGQYYSQPFQ 275
           P  + +FP+  +I W +R    N+ + + ++SSS +P   Y++ PFQ
Sbjct: 170 PGAASNFPHLQDINWAFRHIPQNITSASSSTSSSFIPQAPYFATPFQ 216


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