BLASTX nr result
ID: Akebia23_contig00055090
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia23_contig00055090 (426 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_007032674.1| Pentatricopeptide repeat superfamily protein... 68 1e-09 emb|CBI22283.3| unnamed protein product [Vitis vinifera] 66 6e-09 ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 59 9e-07 >ref|XP_007032674.1| Pentatricopeptide repeat superfamily protein, putative isoform 1 [Theobroma cacao] gi|590650578|ref|XP_007032675.1| Pentatricopeptide repeat superfamily protein, putative isoform 1 [Theobroma cacao] gi|508711703|gb|EOY03600.1| Pentatricopeptide repeat superfamily protein, putative isoform 1 [Theobroma cacao] gi|508711704|gb|EOY03601.1| Pentatricopeptide repeat superfamily protein, putative isoform 1 [Theobroma cacao] Length = 619 Score = 67.8 bits (164), Expect = 1e-09 Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 8/149 (5%) Frame = -3 Query: 424 NKMCVHHFRCKLNFGSANRKSNKK-------HAWGHGLKNVVYGVRKMRITEANLVFGST 266 N +C HFR GS + ++ W + V +G + +++ N +F + Sbjct: 32 NGVCSRHFRGCFFVGSVMKTYRRRVVQRRLNMVWMPVHQCVWFGHLRKKMSPMNFLFELS 91 Query: 265 KVKINMVIFAGFEYGLVCEDEKDSVLIPKGEDEMGIVSYEHVLPPWGNVESPEDHIVEPI 86 ++ MV A E + CED+++++LI KG++E G+ S LPPWGN+ E E Sbjct: 92 RIVPKMV--ASIESEMDCEDDEENILIQKGKEEFGLDSLGQNLPPWGNLVVDESLDFEHT 149 Query: 85 G-GDPSSNCGRVASMLEPKLHFLEERDEE 2 G P+ + S+ + K+HFLEE +EE Sbjct: 150 SVGQPAISSNGKDSVHDSKVHFLEETNEE 178 >emb|CBI22283.3| unnamed protein product [Vitis vinifera] Length = 626 Score = 65.9 bits (159), Expect = 6e-09 Identities = 47/136 (34%), Positives = 74/136 (54%), Gaps = 14/136 (10%) Frame = -3 Query: 367 KSNKKHAWGHGLKNVVY---GVRKMRIT-----EANLVFGSTK-----VKINMVIFAGFE 227 K+NKK GHG+ + G + +T E NL+FGS + + NMV A + Sbjct: 49 KTNKKQLKGHGVDTISLRENGRSQFEVTGHIMMEMNLLFGSERRDTPRIVSNMV--ACVQ 106 Query: 226 YGLVCEDEKDSVLIPKGEDEMGIVSYEHVLPPWGNVESPEDHIVEPIG-GDPSSNCGRVA 50 GLVCE++++++L + ++E +E PP GN E ++ E IG +P + ++ Sbjct: 107 SGLVCEEDEENMLNQRRKEEFDPSYFEQKFPPLGNSEIHKNPDFEHIGVAEPLTISTGIS 166 Query: 49 SMLEPKLHFLEERDEE 2 S E KLHFLEER+E+ Sbjct: 167 SEFEDKLHFLEERNEQ 182 >ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like [Vitis vinifera] Length = 546 Score = 58.5 bits (140), Expect = 9e-07 Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 6/103 (5%) Frame = -3 Query: 292 EANLVFGSTK-----VKINMVIFAGFEYGLVCEDEKDSVLIPKGEDEMGIVSYEHVLPPW 128 E NL+FGS + + NMV A + GLVCE++++++L + ++E +E PP Sbjct: 2 EMNLLFGSERRDTPRIVSNMV--ACVQSGLVCEEDEENMLNQRRKEEFDPSYFEQKFPPL 59 Query: 127 GNVESPEDHIVEPIG-GDPSSNCGRVASMLEPKLHFLEERDEE 2 GN E ++ E IG +P + ++S E KLHFLEER+E+ Sbjct: 60 GNSEIHKNPDFEHIGVAEPLTISTGISSEFEDKLHFLEERNEQ 102