BLASTX nr result

ID: Akebia23_contig00053888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00053888
         (445 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79593.1| hypothetical protein VITISV_040034 [Vitis vinifera]    45   8e-06
emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]    45   1e-05

>emb|CAN79593.1| hypothetical protein VITISV_040034 [Vitis vinifera]
          Length = 736

 Score = 45.4 bits (106), Expect(2) = 8e-06
 Identities = 19/39 (48%), Positives = 24/39 (61%)
 Frame = +2

Query: 26  GLGFRKLRYMNSALFDNWIWKFGE*QNSSWRKVISTKCG 142
           GLG RK+  +N AL D WIW+F   +   W+KVI  K G
Sbjct: 496 GLGIRKIDLLNKALLDKWIWRFAFEKEILWKKVIGVKYG 534



 Score = 29.6 bits (65), Expect(2) = 8e-06
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 6/102 (5%)
 Frame = +3

Query: 156 WESGEARSSFGAVCSKVLVKS---FLNFIGGCLSRSTGV--MGGH*CGENTLKEQFAYLF 320
           W + EAR +FG    K ++K      + IG  +   T V     + CG   L + F  LF
Sbjct: 540 WRTNEARGTFGVGVWKEILKEANWCWDNIGFKVGEGTKVKFWTDNWCGNTALSQNFPQLF 599

Query: 321 PIYSKKEKSRQNFLV*S-RELFLDFGFKRN*NDWEVQVISDL 443
            +   +  +       S  +   +  F R+ NDWE+ +I +L
Sbjct: 600 ALAIHRNATVNEVWDSSLGQGGWNLRFSRDSNDWELDLIGEL 641


>emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]
          Length = 1875

 Score = 44.7 bits (104), Expect(2) = 1e-05
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = +2

Query: 26   GLGFRKLRYMNSALFDNWIWKFGE*QNSSWRKVISTKCG 142
            GLG RK+  +N AL   WIW+F   + + W+KVI  K G
Sbjct: 1520 GLGIRKIDLLNKALLSKWIWRFAFEEGTLWKKVIGVKYG 1558



 Score = 30.0 bits (66), Expect(2) = 1e-05
 Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
 Frame = +3

Query: 156  WESGEARSSFGAVCSKVLVKSF------LNFIGGCLSRSTGVMGGH*CGENTLKEQFAYL 317
            W + EAR +FG    K ++K        + F  G  +R       H CG+  L   F  L
Sbjct: 1564 WRTNEARGAFGVXVWKEILKEANWCWDNIRFKVGKGTR-VNFWTDHWCGDEALSRIFPQL 1622

Query: 318  FPIYSKKEKSRQNFLV*S-RELFLDFGFKRN*NDWEVQVISDL 443
            F +   K  +       S  +   +  F R+ NDWE+ VI  L
Sbjct: 1623 FALAVHKNATISEVWDSSLGQGGWNLRFARDSNDWELVVIEAL 1665


Top