BLASTX nr result
ID: Akebia23_contig00053339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00053339
(363 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 140 2e-31
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 140 2e-31
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 133 3e-29
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 133 3e-29
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 132 5e-29
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 128 9e-28
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 127 2e-27
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 127 2e-27
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 126 4e-27
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 125 5e-27
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 125 5e-27
gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 125 8e-27
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 123 2e-26
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas... 123 2e-26
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 121 9e-26
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 120 2e-25
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 120 2e-25
gb|EYU23205.1| hypothetical protein MIMGU_mgv11b022747mg, partia... 119 3e-25
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 119 3e-25
ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thali... 119 3e-25
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 140 bits (352), Expect = 2e-31
Identities = 63/86 (73%), Positives = 75/86 (87%)
Frame = +1
Query: 106 VQDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLL 285
++D +QFTKEPYIEDVGPRKI+SI+F++FS +EI KAAEVQVWRG +YD+ RKPIENGLL
Sbjct: 1 MKDGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLL 60
Query: 286 DSHMGPANKSGICATCHGSFAACPGH 363
D MGPANK+G CATC G+F CPGH
Sbjct: 61 DPRMGPANKNGTCATCLGNFRDCPGH 86
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 140 bits (352), Expect = 2e-31
Identities = 63/86 (73%), Positives = 75/86 (87%)
Frame = +1
Query: 106 VQDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLL 285
++D +QFTKEPYIEDVGPRKI+SI+F++FS +EI KAAEVQVWRG +YD+ RKPIENGLL
Sbjct: 1 MKDGIQFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLL 60
Query: 286 DSHMGPANKSGICATCHGSFAACPGH 363
D MGPANK+G CATC G+F CPGH
Sbjct: 61 DPRMGPANKNGTCATCLGNFRDCPGH 86
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 133 bits (334), Expect = 3e-29
Identities = 60/89 (67%), Positives = 74/89 (83%)
Frame = +1
Query: 97 MAIVQDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIEN 276
M +Q+ LQ TK+PYIEDVGPRKIKSIKFS+FS +EI K+AEV+V+ G +Y+ST+KPI+N
Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60
Query: 277 GLLDSHMGPANKSGICATCHGSFAACPGH 363
GLLD MGP NK+G C TCHG+F CPGH
Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGH 89
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 133 bits (334), Expect = 3e-29
Identities = 60/89 (67%), Positives = 74/89 (83%)
Frame = +1
Query: 97 MAIVQDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIEN 276
M +Q+ LQ TK+PYIEDVGPRKIKSIKFS+FS +EI K+AEV+V+ G +Y+ST+KPI+N
Sbjct: 1 MKRIQNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQN 60
Query: 277 GLLDSHMGPANKSGICATCHGSFAACPGH 363
GLLD MGP NK+G C TCHG+F CPGH
Sbjct: 61 GLLDPRMGPPNKNGCCETCHGNFRECPGH 89
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 132 bits (332), Expect = 5e-29
Identities = 60/85 (70%), Positives = 71/85 (83%)
Frame = +1
Query: 109 QDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLD 288
Q+ LQ TK+PYIEDVGPRKIKSIKFS+FS +EI K AEV+V+ G +Y+ST+KPI+NGLLD
Sbjct: 5 QESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQNGLLD 64
Query: 289 SHMGPANKSGICATCHGSFAACPGH 363
MGP NKSG C TCHG+F CPGH
Sbjct: 65 PRMGPPNKSGCCETCHGNFRECPGH 89
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 128 bits (321), Expect = 9e-28
Identities = 60/83 (72%), Positives = 68/83 (81%)
Frame = +1
Query: 115 QLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLDSH 294
Q +FTK PYIEDVGPRKIKSI+FSM S +EI KAAEVQV++ +YD +PIE GLLD
Sbjct: 2 QQKFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPR 61
Query: 295 MGPANKSGICATCHGSFAACPGH 363
MGPANKSG CATCHG+FA CPGH
Sbjct: 62 MGPANKSGKCATCHGNFADCPGH 84
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 127 bits (318), Expect = 2e-27
Identities = 59/92 (64%), Positives = 70/92 (76%)
Frame = +1
Query: 88 SQHMAIVQDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKP 267
+Q + + FTK+PYIEDVGPRKI+SI+FSM S +EI KAAEVQV++G +Y S R P
Sbjct: 2 TQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVP 61
Query: 268 IENGLLDSHMGPANKSGICATCHGSFAACPGH 363
IE GLLD MGPANKS CATCHG F+ CPGH
Sbjct: 62 IEGGLLDPRMGPANKSCTCATCHGGFSNCPGH 93
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Cucumis sativus]
Length = 1400
Score = 127 bits (318), Expect = 2e-27
Identities = 58/82 (70%), Positives = 68/82 (82%)
Frame = +1
Query: 118 LQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLDSHM 297
L FTK+PYIEDVGPRKIKS++F+ FSGAEI K AEVQV++G +YD+TRKPI+ GLLD M
Sbjct: 9 LVFTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRM 68
Query: 298 GPANKSGICATCHGSFAACPGH 363
GPANK CATCH +F CPGH
Sbjct: 69 GPANKGCKCATCHANFGDCPGH 90
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 126 bits (316), Expect = 4e-27
Identities = 56/83 (67%), Positives = 64/83 (77%)
Frame = +1
Query: 115 QLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLDSH 294
+++FTK+PYIEDVGP KIKSI FS+FS EI KAAEVQVWR +Y+S KP+E GLLD
Sbjct: 6 EIEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGLLDPR 65
Query: 295 MGPANKSGICATCHGSFAACPGH 363
MGP NK ICATCH F CPGH
Sbjct: 66 MGPPNKKSICATCHADFQNCPGH 88
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 125 bits (315), Expect = 5e-27
Identities = 57/89 (64%), Positives = 71/89 (79%)
Frame = +1
Query: 97 MAIVQDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIEN 276
MA +++L+ TKEP+IEDVG R+IKSI+FSMFSG E+R++AEVQVW Y+ KP+ N
Sbjct: 1 MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60
Query: 277 GLLDSHMGPANKSGICATCHGSFAACPGH 363
GLLD+ MG ANK G C+TCHGSFA CPGH
Sbjct: 61 GLLDTRMGAANKLGECSTCHGSFAECPGH 89
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 125 bits (315), Expect = 5e-27
Identities = 57/89 (64%), Positives = 71/89 (79%)
Frame = +1
Query: 97 MAIVQDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIEN 276
MA +++L+ TKEP+IEDVG R+IKSI+FSMFSG E+R++AEVQVW Y+ KP+ N
Sbjct: 1 MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN 60
Query: 277 GLLDSHMGPANKSGICATCHGSFAACPGH 363
GLLD+ MG ANK G C+TCHGSFA CPGH
Sbjct: 61 GLLDTRMGAANKLGECSTCHGSFAECPGH 89
>gb|EXB53230.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 232
Score = 125 bits (313), Expect = 8e-27
Identities = 57/92 (61%), Positives = 72/92 (78%), Gaps = 3/92 (3%)
Frame = +1
Query: 97 MAIVQDQLQ---FTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKP 267
MA +DQ Q FTK+P++EDVGPR+IKS++F++ S +EI K AEVQVW+G +YD RKP
Sbjct: 1 MAASRDQAQNILFTKQPFVEDVGPRRIKSMQFTVQSASEISKMAEVQVWKGQYYDPNRKP 60
Query: 268 IENGLLDSHMGPANKSGICATCHGSFAACPGH 363
+E+GLLD MGPANK CATCHG F+ CPGH
Sbjct: 61 VEDGLLDPRMGPANKFSECATCHGRFSDCPGH 92
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 123 bits (309), Expect = 2e-26
Identities = 55/89 (61%), Positives = 70/89 (78%)
Frame = +1
Query: 97 MAIVQDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIEN 276
MA +++L+ TKEP+IED G R+IKSI+FSMFSG E+R++AEVQVW Y+ +P+ N
Sbjct: 1 MARPEEKLRCTKEPFIEDAGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNQEMRPVPN 60
Query: 277 GLLDSHMGPANKSGICATCHGSFAACPGH 363
GLLD+ MG ANK G C+TCHGSFA CPGH
Sbjct: 61 GLLDTRMGAANKLGECSTCHGSFAECPGH 89
>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
gi|561005141|gb|ESW04135.1| hypothetical protein
PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 123 bits (309), Expect = 2e-26
Identities = 55/82 (67%), Positives = 65/82 (79%)
Frame = +1
Query: 118 LQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLDSHM 297
+ FTKEP++ED GPRKIK++KFSM S +EI K EVQVW+G +YDS +KPI GLLD M
Sbjct: 9 ITFTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIHGGLLDPRM 68
Query: 298 GPANKSGICATCHGSFAACPGH 363
GPANKS CATCHG+F CPGH
Sbjct: 69 GPANKSLGCATCHGNFHDCPGH 90
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Glycine max]
Length = 1391
Score = 121 bits (304), Expect = 9e-26
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = +1
Query: 118 LQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLDSHM 297
+ FTKEP++ED GPRKIK++KFS S +EI K AEVQVW+G +YDS +KPI GLLD M
Sbjct: 9 ITFTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIHGGLLDPRM 68
Query: 298 GPANKSGICATCHGSFAACPGH 363
GPANKS +CATC G+F CPGH
Sbjct: 69 GPANKSLVCATCDGNFHDCPGH 90
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 120 bits (302), Expect = 2e-25
Identities = 52/83 (62%), Positives = 64/83 (77%)
Frame = +1
Query: 115 QLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLDSH 294
+++FTK+PYIEDVGP KIKSI FS+ S E+ KAAEVQVW+ +Y++ KP ENGLLD+
Sbjct: 6 EIEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGLLDAR 65
Query: 295 MGPANKSGICATCHGSFAACPGH 363
MGP NK IC TC G+F CPGH
Sbjct: 66 MGPPNKKSICTTCDGNFQNCPGH 88
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 120 bits (301), Expect = 2e-25
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +1
Query: 97 MAIVQDQLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIEN 276
MA +++L+ TKEP++EDVG R+IKS++FSMFSG EIR++AE QVW Y + KP+ N
Sbjct: 1 MARPEEKLRCTKEPFVEDVGTRRIKSMRFSMFSGKEIRQSAETQVWNNRIYGNDMKPVPN 60
Query: 277 GLLDSHMGPANKSGICATCHGSFAACPGH 363
GLLD MG ANK G CATCHGS+ CPGH
Sbjct: 61 GLLDPRMGAANKFGECATCHGSYHECPGH 89
>gb|EYU23205.1| hypothetical protein MIMGU_mgv11b022747mg, partial [Mimulus
guttatus]
Length = 260
Score = 119 bits (299), Expect = 3e-25
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = +1
Query: 118 LQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLDSHM 297
+QFTK PY+EDVGPR+I+SI+FS FS AE+ KA EV+V + +YD RKPI+NGLLD M
Sbjct: 44 IQFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGLLDLRM 103
Query: 298 GPANKSGICATCHGSFAACPGH 363
GPANKS +C TC G FA CPGH
Sbjct: 104 GPANKSILCKTCGGKFAECPGH 125
>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
Length = 1383
Score = 119 bits (299), Expect = 3e-25
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = +1
Query: 115 QLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLDSH 294
+++FTK+PYIEDVGP KIKSI FS+ S E+ KAAEVQVW G YD + KP ENGLLD
Sbjct: 6 EIEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPR 65
Query: 295 MGPANKSGICATCHGSFAACPGH 363
MGP NK IC TC G+F CPGH
Sbjct: 66 MGPPNKKSICTTCEGNFQNCPGH 88
>ref|NP_001190573.1| nuclear RNA polymerase C1 [Arabidopsis thaliana]
gi|332009887|gb|AED97270.1| nuclear RNA polymerase C1
[Arabidopsis thaliana]
Length = 1391
Score = 119 bits (299), Expect = 3e-25
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = +1
Query: 115 QLQFTKEPYIEDVGPRKIKSIKFSMFSGAEIRKAAEVQVWRGGFYDSTRKPIENGLLDSH 294
+++FTK+PYIEDVGP KIKSI FS+ S E+ KAAEVQVW G YD + KP ENGLLD
Sbjct: 6 EIEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGLLDPR 65
Query: 295 MGPANKSGICATCHGSFAACPGH 363
MGP NK IC TC G+F CPGH
Sbjct: 66 MGPPNKKSICTTCEGNFQNCPGH 88