BLASTX nr result
ID: Akebia23_contig00048248
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia23_contig00048248 (414 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-... 56 6e-06 ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr... 56 6e-06 >ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus sinensis] Length = 605 Score = 55.8 bits (133), Expect = 6e-06 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 10/84 (11%) Frame = +3 Query: 192 SKRMACMLPQFKCPP---HIHFRS-----HTHTNLFKTRQPVCFRVQCIM--XXXXXXXX 341 +K M+C+LPQFKC P IHFR+ H ++ K+++P+CFR C++ Sbjct: 21 NKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTA 80 Query: 342 XXXXXXXXXXQLPSFEAHLNSVAA 413 +LPS EAH N+VAA Sbjct: 81 MTTVLDVEKLRLPSLEAHSNAVAA 104 >ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina] gi|557539534|gb|ESR50578.1| hypothetical protein CICLE_v10030998mg [Citrus clementina] Length = 605 Score = 55.8 bits (133), Expect = 6e-06 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 10/84 (11%) Frame = +3 Query: 192 SKRMACMLPQFKCPP---HIHFRS-----HTHTNLFKTRQPVCFRVQCIM--XXXXXXXX 341 +K M+C+LPQFKC P IHFR+ H ++ K+++P+CFR C++ Sbjct: 21 NKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTA 80 Query: 342 XXXXXXXXXXQLPSFEAHLNSVAA 413 +LPS EAH N+VAA Sbjct: 81 MTTVLDVEKLRLPSLEAHSNAVAA 104