BLASTX nr result

ID: Akebia23_contig00048248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00048248
         (414 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...    56   6e-06
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...    56   6e-06

>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
           sinensis]
          Length = 605

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
 Frame = +3

Query: 192 SKRMACMLPQFKCPP---HIHFRS-----HTHTNLFKTRQPVCFRVQCIM--XXXXXXXX 341
           +K M+C+LPQFKC P    IHFR+     H  ++  K+++P+CFR  C++          
Sbjct: 21  NKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTA 80

Query: 342 XXXXXXXXXXQLPSFEAHLNSVAA 413
                     +LPS EAH N+VAA
Sbjct: 81  MTTVLDVEKLRLPSLEAHSNAVAA 104


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
           gi|557539534|gb|ESR50578.1| hypothetical protein
           CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
 Frame = +3

Query: 192 SKRMACMLPQFKCPP---HIHFRS-----HTHTNLFKTRQPVCFRVQCIM--XXXXXXXX 341
           +K M+C+LPQFKC P    IHFR+     H  ++  K+++P+CFR  C++          
Sbjct: 21  NKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTA 80

Query: 342 XXXXXXXXXXQLPSFEAHLNSVAA 413
                     +LPS EAH N+VAA
Sbjct: 81  MTTVLDVEKLRLPSLEAHSNAVAA 104


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