BLASTX nr result
ID: Akebia23_contig00047438
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00047438
(630 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript... 69 1e-09
ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, part... 67 6e-09
ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcript... 67 6e-09
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204... 66 7e-09
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 65 2e-08
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A... 64 3e-08
ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcr... 63 8e-08
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 62 2e-07
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript... 60 4e-07
gb|ABK28243.1| unknown [Arabidopsis thaliana] 60 4e-07
gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thali... 60 4e-07
ref|XP_004174148.1| PREDICTED: uncharacterized protein LOC101232... 60 5e-07
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g... 59 9e-07
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A... 57 3e-06
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 57 3e-06
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ... 57 6e-06
dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop... 57 6e-06
>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 323
Score = 68.6 bits (166), Expect = 1e-09
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Frame = +2
Query: 143 SISPPQQPVLDMTHEDHVIWTA---STSEIFMLASMWLAICTRNEKVNWI*MVWCNNQVN 313
S+ P + +++ H+D W + S IF + W A+ V W VW +++
Sbjct: 106 SVLPSSESMIECQHDDVYKWKPDHHAPSNIFSASKTWTALNPDGVLVPWQKSVWFKDRIP 165
Query: 314 KHSFCTCLAINKEVTTIENLFKQGSNSPSVCALC*TTGETNSHLFFKCCYF--IWILLSI 487
KH+F +A K + T + L + G N P+VC LC ET+ HLFF+C + IW I
Sbjct: 166 KHAFICWVAAWKRLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQCQFSNEIWSFFMI 225
>ref|XP_006300939.1| hypothetical protein CARUB_v10021318mg, partial [Capsella rubella]
gi|482569649|gb|EOA33837.1| hypothetical protein
CARUB_v10021318mg, partial [Capsella rubella]
Length = 290
Score = 66.6 bits (161), Expect = 6e-09
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +2
Query: 149 SPPQQPVLDMTHEDHVIWTASTSE---IFMLASMWLAICTRNEKVNWI*MVWCNNQVNKH 319
S P P + D +W S +E +F + W++ V W VW ++ KH
Sbjct: 67 SLPPVPNMLSLESDFFLWRNSPNEPPGVFSTSKTWISTHPAGPLVPWFKSVWFKERIPKH 126
Query: 320 SFCTCLAINKEVTTIENLFKQGSNSPSVCALC*TTGETNSHLFFKCCY 463
+F + + I +TT + L G N PS C LC ++ E+ HLFF+C Y
Sbjct: 127 AFISWVVIRNRLTTRDRLRGWGMNVPSECLLCTSSAESRLHLFFECAY 174
>ref|NP_175039.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|332193871|gb|AEE31992.1| RNA-directed DNA polymerase
(reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 320
Score = 66.6 bits (161), Expect = 6e-09
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +2
Query: 167 VLDMTHEDHVIWTA---STSEIFMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCL 337
++D H+D IW + S IF A LA+ +N V W VW N V KH+F +
Sbjct: 111 LIDCQHDDSFIWKTDLHAPSNIFSTAKTSLALHPQNHIVPWYKAVWFKNHVPKHAFICWV 170
Query: 338 AINKEVTTIENLFKQGSNSPSVCALC*TTGETNSHLFFKC--CYFIW 472
+ T + L G + P+VC LC + E+ +HLFF+C C +W
Sbjct: 171 VAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFECPFCGAVW 217
>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
Length = 282
Score = 66.2 bits (160), Expect = 7e-09
Identities = 33/100 (33%), Positives = 48/100 (48%)
Frame = +2
Query: 185 EDHVIWTASTSEIFMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCLAINKEVTTI 364
ED +W + + F + S W I + +V W ++W + KHSFC LAI + T
Sbjct: 95 EDRWVWVPGSHDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLGTR 154
Query: 365 ENLFKQGSNSPSVCALC*TTGETNSHLFFKCCYFIWILLS 484
L + + P C LC E+ HLFF C+F W + S
Sbjct: 155 GRLSRWDRSIPLSCLLCGGNYESRDHLFFS-CHFGWEIWS 193
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 65.1 bits (157), Expect = 2e-08
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Frame = +2
Query: 143 SISPPQQPVLDMTHEDHVIWTAST---SEIFMLASMWLAICTRNEKVNWI*MVWCNNQVN 313
S+ PP ++D H+D +W S F A W A+ + V+W VW NQV
Sbjct: 534 SLLPPVGNLVDCEHDDSYLWKVGDRVPSSKFSTADTWRALQPFSVSVSWHKAVWFTNQVP 593
Query: 314 KHSFCTCLAINKEVTTIENLFKQGSNSPSVCALC*TTGETNSHLFFKC 457
KH+F + + + T + L G P+ C LC ET HLFF C
Sbjct: 594 KHAFISWVTAWNRLHTRDRLRSWGLIVPAECVLCNLVDETRDHLFFAC 641
>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 342
Score = 64.3 bits (155), Expect = 3e-08
Identities = 29/89 (32%), Positives = 45/89 (50%)
Frame = +2
Query: 185 EDHVIWTASTSEIFMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCLAINKEVTTI 364
ED +W + + F + S W I + +V W ++W + KHSFC LAI ++T
Sbjct: 168 EDRWVWVPGSRDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPKHSFCAWLAIRDRLSTR 227
Query: 365 ENLFKQGSNSPSVCALC*TTGETNSHLFF 451
+ L + + P C LC E+ +HLFF
Sbjct: 228 DRLSRWDRSIPLSCLLCGGNYESRNHLFF 256
>ref|NP_001031892.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|98962153|gb|ABF59406.1| unknown protein [Arabidopsis
thaliana] gi|332004916|gb|AED92299.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
Length = 209
Score = 62.8 bits (151), Expect = 8e-08
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +2
Query: 185 EDHVIWTASTSEI---FMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCLAINKEV 355
+D +W SE F A+ W+ + EKV+W +W ++ KH+F + + I +
Sbjct: 110 DDLFMWKVGGSEASVGFSSAATWIHLNPVGEKVDWHKAIWFKGRIPKHAFISWVNIRHRL 169
Query: 356 TTIENLFKQGSNSPSVCALC*TTGETNSHLFFKCCY 463
T + L G + PS+C LC ET HLFF C +
Sbjct: 170 PTRDKLLSWGLHVPSLCLLCNAFDETRQHLFFDCVF 205
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 61.6 bits (148), Expect = 2e-07
Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Frame = +2
Query: 185 EDHVIWTASTSEI---FMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCLAINKEV 355
ED ++W F W I T + + W VW + K SFC LAI +
Sbjct: 744 EDAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIRNRL 803
Query: 356 TTIENLFKQGSNSPSVCALC*TTGETNSHLFFKCCYFIWILLSILGRLGVRRLET 520
+T + + + +P+ C C + ET HLFF+CCY I SI + R T
Sbjct: 804 STGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTSIAKNVYKDRFST 858
>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
to a family of Arabidopsis thaliana predicted proteins,
which have similarity to reverse transcriptases; see
T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
Length = 332
Score = 60.5 bits (145), Expect = 4e-07
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = +2
Query: 143 SISPPQQPVLDMTHEDHVIWTA---STSEIFMLASMWLAICTRNEKVNWI*MVWCNNQVN 313
++ P Q +LD H+D +W + S F W A+ ++ V W VW N V
Sbjct: 81 NLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVP 140
Query: 314 KHSFCTCLAINKEVTTIENLFKQGSNSPSVCALC*TTGETNSHLFFKC 457
KH+F + + T + L G + P+ C LC ++ +HLFF+C
Sbjct: 141 KHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFEC 188
>gb|ABK28243.1| unknown [Arabidopsis thaliana]
Length = 297
Score = 60.5 bits (145), Expect = 4e-07
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = +2
Query: 143 SISPPQQPVLDMTHEDHVIWTA---STSEIFMLASMWLAICTRNEKVNWI*MVWCNNQVN 313
++ P Q +LD H+D +W + S F W A+ ++ V W VW N V
Sbjct: 81 NLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVP 140
Query: 314 KHSFCTCLAINKEVTTIENLFKQGSNSPSVCALC*TTGETNSHLFFKC 457
KH+F + + T + L G + P+ C LC ++ +HLFF+C
Sbjct: 141 KHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFEC 188
>gb|ABE65512.1| hypothetical protein At4g04650 [Arabidopsis thaliana]
Length = 296
Score = 60.5 bits (145), Expect = 4e-07
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = +2
Query: 143 SISPPQQPVLDMTHEDHVIWTA---STSEIFMLASMWLAICTRNEKVNWI*MVWCNNQVN 313
++ P Q +LD H+D +W + S F W A+ ++ V W VW N V
Sbjct: 81 NLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVWFKNHVP 140
Query: 314 KHSFCTCLAINKEVTTIENLFKQGSNSPSVCALC*TTGETNSHLFFKC 457
KH+F + + T + L G + P+ C LC ++ +HLFF+C
Sbjct: 141 KHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFEC 188
>ref|XP_004174148.1| PREDICTED: uncharacterized protein LOC101232502 [Cucumis sativus]
Length = 191
Score = 60.1 bits (144), Expect = 5e-07
Identities = 29/89 (32%), Positives = 44/89 (49%)
Frame = +2
Query: 185 EDHVIWTASTSEIFMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCLAINKEVTTI 364
ED +W + + F +AS+W I + +V W ++W + KHSF LAI + T
Sbjct: 78 EDRWVWVPGSLDSFSIASVWETIRPHSSRVGWSGLLWGGGNIPKHSFYAWLAIRDMLGTR 137
Query: 365 ENLFKQGSNSPSVCALC*TTGETNSHLFF 451
+ L + + P C LC E+ HLFF
Sbjct: 138 DRLSRWDRSIPLSCMLCGRNFESRDHLFF 166
>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
gi|355506707|gb|AES87849.1| GDSL esterase/lipase
[Medicago truncatula]
Length = 1004
Score = 59.3 bits (142), Expect = 9e-07
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Frame = +2
Query: 185 EDHVIWTASTSEIFMLASMWLAICTRNEKVN---WI*MVWCNNQVNKHSFCTCLAINKEV 355
ED +IW +++ M+ + +N+ VN W ++W + S T I+ +V
Sbjct: 81 EDKLIWNHNSNGDLMMRDSY---AFKNQPVNTHNWAKLIWSKDIPPSKSILTWRLIHDKV 137
Query: 356 TTIENLFKQGSNSPSVCALC*TTGETNSHLFFKCCY 463
T E L ++G PS+C+LC T ET+ HLFF+CC+
Sbjct: 138 PTDEKLQQRGCQLPSMCSLCGTHVETSFHLFFECCF 173
>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 288
Score = 57.4 bits (137), Expect = 3e-06
Identities = 31/91 (34%), Positives = 44/91 (48%)
Frame = +2
Query: 185 EDHVIWTASTSEIFMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCLAINKEVTTI 364
ED + + E F + S AI + +V W ++W + KHSF T LAI + T
Sbjct: 170 EDMWVRVPGSHESFSIVSACEAIRPHSSRVGWSGLLWGGGNIPKHSFYTWLAIKDRLGTR 229
Query: 365 ENLFKQGSNSPSVCALC*TTGETNSHLFFKC 457
+ L + S+ P C LC E+ HLFF C
Sbjct: 230 DRLSRWDSSIPLSCILCGRNYESRDHLFFPC 260
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 57.4 bits (137), Expect = 3e-06
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 179 THEDHVIWTASTSEI---FMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCLAINK 349
T+ D V+W E F W + V W +W + K SFC LA+
Sbjct: 450 TNMDSVLWRGRNDEYMPKFSTRDTWNQTRNTSTPVTWHMGIWFAHATPKFSFCAWLAVQN 509
Query: 350 EVTTIENLFKQGSNSPSVCALC*TTGETNSHLFFKCCY 463
++T + + + C LC ET +HLFF CCY
Sbjct: 510 RLSTGDKMLQWNRRLSPTCVLCNNNIETRNHLFFSCCY 547
>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 637
Score = 56.6 bits (135), Expect = 6e-06
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 224 FMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCLAINKEVTTIENLFKQGSNSPSV 403
F W I T + + W VW + K+SF T LA + + T + L+K S + +
Sbjct: 261 FSSPKTWQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYKWNSEARAT 320
Query: 404 CALC*TTGETNSHLFFKCCYF--IWILLS 484
C C ET HLFF C Y IWI L+
Sbjct: 321 CVFCDEELETRDHLFFSCPYSSQIWIALA 349
>dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana]
Length = 278
Score = 56.6 bits (135), Expect = 6e-06
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 224 FMLASMWLAICTRNEKVNWI*MVWCNNQVNKHSFCTCLAINKEVTTIENLFKQGSNSPSV 403
F W I T + + W VW + K+SF T LA + + T + L+K S + +
Sbjct: 93 FSSPKTWQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNRLATGDRLYKWNSEARAT 152
Query: 404 CALC*TTGETNSHLFFKCCYF--IWILLS 484
C C ET HLFF C Y IWI L+
Sbjct: 153 CVFCDEELETRDHLFFSCPYSSQIWIALA 181