BLASTX nr result

ID: Akebia23_contig00047380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00047380
         (332 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006381708.1| hypothetical protein POPTR_0006s16200g [Popu...    66   4e-09
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative...    60   4e-07
ref|XP_006475707.1| PREDICTED: DNA mismatch repair protein MSH7-...    59   9e-07
ref|XP_006451109.1| hypothetical protein CICLE_v10007291mg [Citr...    59   9e-07
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...    58   1e-06
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]    58   1e-06

>ref|XP_006381708.1| hypothetical protein POPTR_0006s16200g [Populus trichocarpa]
           gi|550336459|gb|ERP59505.1| hypothetical protein
           POPTR_0006s16200g [Populus trichocarpa]
          Length = 973

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
 Frame = +3

Query: 3   RQLFPEKVPENDETR-SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKFSVVQ 179
           RQ+ P  + EN+E + +SL SSIMHKF KV ++E    +NQ +   ++ C TS  F++ +
Sbjct: 71  RQILPVNIKENEEAKVASLFSSIMHKFVKVDDREKPNGRNQVH--SANVCSTSVTFTIPK 128

Query: 180 GLSRQETPSRDPPKDNVSEFSYHGEGDLSL---FGSVPDNLGPETPAMRPLVPR 332
            L +    +    KDN   FS  G  D +      SV D  GP TP MRPLVPR
Sbjct: 129 ELPQHGMDTLYSEKDN--GFSSSGMVDQTSVLNIESVNDVPGPHTPGMRPLVPR 180


>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
           gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
           MSH6-2, putative [Ricinus communis]
          Length = 1089

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   RQLFPEKVPENDETR-SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKFSVVQ 179
           RQ+ P +  EN+  + SSL SSIMHKF K  ++E    +   N   ++    S +F+  +
Sbjct: 65  RQILPVRSTENESIKGSSLFSSIMHKFVKTDDKEKPLQRILANHTSTN---VSGRFTDKK 121

Query: 180 GLSRQETPSRDPPKDNVSEFSYHGEGDLSLFGSVPDNLGPETPAMRPLVPR 332
           GLS+Q T +  P K N    SY+   D+    +  D  GPETP ++PLVPR
Sbjct: 122 GLSKQGTTALYPEKGNPC--SYNAVVDVE--SNDDDVPGPETPGVQPLVPR 168


>ref|XP_006475707.1| PREDICTED: DNA mismatch repair protein MSH7-like [Citrus sinensis]
          Length = 1105

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
 Frame = +3

Query: 3   RQLFPEKVPENDETR--SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKFSVV 176
           RQ+ P     N+ T   SSL SSIMHKF KV  ++++  +N+ +   S+ C    K   +
Sbjct: 73  RQILPSGFKANEGTSGGSSLFSSIMHKFVKVDARQNANKRNEQHGNSSTVCSVFGKTGDL 132

Query: 177 QGLSRQETPSRDPPKDNVSEFSYHG---EGDLSLFGSVPDNLGPETPAMRPLVPR 332
           +  S+Q T S    KDNV  F+ +G   +G +S      D  GP+TP M  +VPR
Sbjct: 133 EASSQQGTASLYSEKDNV--FNCNGLANQGCVSCTEMNEDVSGPDTPGMHRVVPR 185


>ref|XP_006451109.1| hypothetical protein CICLE_v10007291mg [Citrus clementina]
           gi|557554335|gb|ESR64349.1| hypothetical protein
           CICLE_v10007291mg [Citrus clementina]
          Length = 1105

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
 Frame = +3

Query: 3   RQLFPEKVPENDETR--SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKFSVV 176
           RQ+ P     N+ T   SSL SSIMHKF KV  ++++  +N+ +   S+ C    K   +
Sbjct: 73  RQILPSGFKANEGTSGGSSLFSSIMHKFVKVDARQNANKRNEQHGNSSTVCSVFGKTGDL 132

Query: 177 QGLSRQETPSRDPPKDNVSEFSYHG---EGDLSLFGSVPDNLGPETPAMRPLVPR 332
           +  S+Q T S    KDNV  F+ +G   +G +S      D  GP+TP M  +VPR
Sbjct: 133 EASSQQGTASLYSEKDNV--FNCNGLANQGCVSCTEMNEDVSGPDTPGMHRVVPR 185


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
 Frame = +3

Query: 3   RQLFPEKVPENDETR-----SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKF 167
           RQ+ P     ND+ +     SSL SSIMHKF KV E+ESS ++ + +   S+ C TS   
Sbjct: 77  RQMIPASFTANDDRKAASSSSSLFSSIMHKFVKVDERESSCERKEMHSGSSNTCSTSVN- 135

Query: 168 SVVQGLSRQETPSRDPPKDNVSEFSYHGEGDLSLFGSVPDN--LGPETPAMRPLVPR 332
           S  + L ++        K++    +       SL     D+  +GPETP MRP VPR
Sbjct: 136 SDCEVLPKEGNVFHSDAKESGFNSTKQVNQVCSLHSESGDDDIIGPETPGMRPFVPR 192


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
 Frame = +3

Query: 3   RQLFPEKVPENDETR-----SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKF 167
           RQ+ P     ND+ +     SSL SSIMHKF KV E+ESS ++ + +   S+ C TS   
Sbjct: 77  RQMIPASFTANDDRKAASSSSSLFSSIMHKFVKVDERESSCERKEMHSGSSNTCSTSVN- 135

Query: 168 SVVQGLSRQETPSRDPPKDNVSEFSYHGEGDLSLFGSVPDN--LGPETPAMRPLVPR 332
           S  + L ++        K++    +       SL     D+  +GPETP MRP VPR
Sbjct: 136 SDCEVLPKEGNVFHSDAKESGFNSTKQVNQVCSLHSESGDDDIIGPETPGMRPFVPR 192


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