BLASTX nr result
ID: Akebia23_contig00047380
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia23_contig00047380 (332 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006381708.1| hypothetical protein POPTR_0006s16200g [Popu... 66 4e-09 ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative... 60 4e-07 ref|XP_006475707.1| PREDICTED: DNA mismatch repair protein MSH7-... 59 9e-07 ref|XP_006451109.1| hypothetical protein CICLE_v10007291mg [Citr... 59 9e-07 ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-... 58 1e-06 emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera] 58 1e-06 >ref|XP_006381708.1| hypothetical protein POPTR_0006s16200g [Populus trichocarpa] gi|550336459|gb|ERP59505.1| hypothetical protein POPTR_0006s16200g [Populus trichocarpa] Length = 973 Score = 66.2 bits (160), Expect = 4e-09 Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Frame = +3 Query: 3 RQLFPEKVPENDETR-SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKFSVVQ 179 RQ+ P + EN+E + +SL SSIMHKF KV ++E +NQ + ++ C TS F++ + Sbjct: 71 RQILPVNIKENEEAKVASLFSSIMHKFVKVDDREKPNGRNQVH--SANVCSTSVTFTIPK 128 Query: 180 GLSRQETPSRDPPKDNVSEFSYHGEGDLSL---FGSVPDNLGPETPAMRPLVPR 332 L + + KDN FS G D + SV D GP TP MRPLVPR Sbjct: 129 ELPQHGMDTLYSEKDN--GFSSSGMVDQTSVLNIESVNDVPGPHTPGMRPLVPR 180 >ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis] gi|223546788|gb|EEF48286.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis] Length = 1089 Score = 59.7 bits (143), Expect = 4e-07 Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Frame = +3 Query: 3 RQLFPEKVPENDETR-SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKFSVVQ 179 RQ+ P + EN+ + SSL SSIMHKF K ++E + N ++ S +F+ + Sbjct: 65 RQILPVRSTENESIKGSSLFSSIMHKFVKTDDKEKPLQRILANHTSTN---VSGRFTDKK 121 Query: 180 GLSRQETPSRDPPKDNVSEFSYHGEGDLSLFGSVPDNLGPETPAMRPLVPR 332 GLS+Q T + P K N SY+ D+ + D GPETP ++PLVPR Sbjct: 122 GLSKQGTTALYPEKGNPC--SYNAVVDVE--SNDDDVPGPETPGVQPLVPR 168 >ref|XP_006475707.1| PREDICTED: DNA mismatch repair protein MSH7-like [Citrus sinensis] Length = 1105 Score = 58.5 bits (140), Expect = 9e-07 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 5/115 (4%) Frame = +3 Query: 3 RQLFPEKVPENDETR--SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKFSVV 176 RQ+ P N+ T SSL SSIMHKF KV ++++ +N+ + S+ C K + Sbjct: 73 RQILPSGFKANEGTSGGSSLFSSIMHKFVKVDARQNANKRNEQHGNSSTVCSVFGKTGDL 132 Query: 177 QGLSRQETPSRDPPKDNVSEFSYHG---EGDLSLFGSVPDNLGPETPAMRPLVPR 332 + S+Q T S KDNV F+ +G +G +S D GP+TP M +VPR Sbjct: 133 EASSQQGTASLYSEKDNV--FNCNGLANQGCVSCTEMNEDVSGPDTPGMHRVVPR 185 >ref|XP_006451109.1| hypothetical protein CICLE_v10007291mg [Citrus clementina] gi|557554335|gb|ESR64349.1| hypothetical protein CICLE_v10007291mg [Citrus clementina] Length = 1105 Score = 58.5 bits (140), Expect = 9e-07 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 5/115 (4%) Frame = +3 Query: 3 RQLFPEKVPENDETR--SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKFSVV 176 RQ+ P N+ T SSL SSIMHKF KV ++++ +N+ + S+ C K + Sbjct: 73 RQILPSGFKANEGTSGGSSLFSSIMHKFVKVDARQNANKRNEQHGNSSTVCSVFGKTGDL 132 Query: 177 QGLSRQETPSRDPPKDNVSEFSYHG---EGDLSLFGSVPDNLGPETPAMRPLVPR 332 + S+Q T S KDNV F+ +G +G +S D GP+TP M +VPR Sbjct: 133 EASSQQGTASLYSEKDNV--FNCNGLANQGCVSCTEMNEDVSGPDTPGMHRVVPR 185 >ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera] Length = 1122 Score = 58.2 bits (139), Expect = 1e-06 Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 7/117 (5%) Frame = +3 Query: 3 RQLFPEKVPENDETR-----SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKF 167 RQ+ P ND+ + SSL SSIMHKF KV E+ESS ++ + + S+ C TS Sbjct: 77 RQMIPASFTANDDRKAASSSSSLFSSIMHKFVKVDERESSCERKEMHSGSSNTCSTSVN- 135 Query: 168 SVVQGLSRQETPSRDPPKDNVSEFSYHGEGDLSLFGSVPDN--LGPETPAMRPLVPR 332 S + L ++ K++ + SL D+ +GPETP MRP VPR Sbjct: 136 SDCEVLPKEGNVFHSDAKESGFNSTKQVNQVCSLHSESGDDDIIGPETPGMRPFVPR 192 >emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera] Length = 1090 Score = 58.2 bits (139), Expect = 1e-06 Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 7/117 (5%) Frame = +3 Query: 3 RQLFPEKVPENDETR-----SSLVSSIMHKFTKVYEQESSRDQNQTNCVPSSGCLTSSKF 167 RQ+ P ND+ + SSL SSIMHKF KV E+ESS ++ + + S+ C TS Sbjct: 77 RQMIPASFTANDDRKAASSSSSLFSSIMHKFVKVDERESSCERKEMHSGSSNTCSTSVN- 135 Query: 168 SVVQGLSRQETPSRDPPKDNVSEFSYHGEGDLSLFGSVPDN--LGPETPAMRPLVPR 332 S + L ++ K++ + SL D+ +GPETP MRP VPR Sbjct: 136 SDCEVLPKEGNVFHSDAKESGFNSTKQVNQVCSLHSESGDDDIIGPETPGMRPFVPR 192