BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00047320
         (589 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...   263   2e-68
ref|XP_007226900.1| hypothetical protein PRUPE_ppa016366mg [Prun...   262   5e-68
ref|XP_007046082.1| Pentatricopeptide repeat (PPR) superfamily p...   247   2e-63
gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis]     246   3e-63
ref|XP_007157618.1| hypothetical protein PHAVU_002G084700g [Phas...   243   3e-62
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi...   242   5e-62
ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citr...   238   7e-61
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi...   236   4e-60
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi...   235   6e-60
ref|XP_002316137.1| pentatricopeptide repeat-containing family p...   235   6e-60
ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containi...   227   2e-57
ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containi...   226   3e-57
ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containi...   226   4e-57
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr...   223   2e-56
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali...   223   4e-56
ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]...   222   7e-56
ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Caps...   218   1e-54
ref|XP_002875182.1| pentatricopeptide repeat-containing protein ...   214   1e-53
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ...   192   8e-47
ref|XP_006827256.1| hypothetical protein AMTR_s00010p00262470 [A...   184   1e-44

>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
           protein product [Vitis vinifera]
          Length = 595

 Score =  263 bits (673), Expect = 2e-68
 Identities = 128/181 (70%), Positives = 152/181 (83%), Gaps = 1/181 (0%)
 Frame = +2

Query: 47  NNTKETHQSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTT-MDH 223
           +N+  TH  PLSLLPKC SLR+LKQ+QAF IK+ L  D+SVLTK INFC+LNP+TT M H
Sbjct: 16  SNSNTTH--PLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQH 73

Query: 224 AQQLFDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACAN 403
           A  LFDQIPQPDIVLFNTMARGYA+T + +RA  LF +IL SG+ PDDYTFPSLLKACA+
Sbjct: 74  AHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACAS 133

Query: 404 SKALEEGKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAM 583
            KALEEG+Q+HCL+IK+GL +N+YV PTLINMYT C ++  AR+VFDKI +PCVVTYNAM
Sbjct: 134 CKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAM 193

Query: 584 I 586
           I
Sbjct: 194 I 194



 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 59/176 (33%), Positives = 91/176 (51%)
 Frame = +2

Query: 62  THQSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFD 241
           T  S L     C +L + +Q+    IK  L  ++ V   LIN  T      MD A+++FD
Sbjct: 123 TFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTA--CNEMDCARRVFD 180

Query: 242 QIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEE 421
           +I +P +V +N M  GYA+      A++LF ++    + P D T  S+L +CA   AL+ 
Sbjct: 181 KIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDL 240

Query: 422 GKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           GK +H    K G ++ + V   LI+MY +CG L  A  VF+ +       ++AMIM
Sbjct: 241 GKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIM 296


>ref|XP_007226900.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
           gi|462423836|gb|EMJ28099.1| hypothetical protein
           PRUPE_ppa016366mg [Prunus persica]
          Length = 593

 Score =  262 bits (670), Expect = 5e-68
 Identities = 127/181 (70%), Positives = 154/181 (85%), Gaps = 1/181 (0%)
 Frame = +2

Query: 47  NNTKETHQSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPS-TTMDH 223
           ++ K    +P+SL+PKC SLR+LKQIQAF+IK+ LQ+DISVLTKLINFCTLNP+ T+MD+
Sbjct: 12  SHPKTNTNTPVSLIPKCTSLRELKQIQAFSIKTHLQYDISVLTKLINFCTLNPTGTSMDY 71

Query: 224 AQQLFDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACAN 403
           A  LFDQIP PDIV+FNTMARGYA++ +  RA++LF  IL+S + PDDYTF SLLKACA+
Sbjct: 72  AHHLFDQIPHPDIVVFNTMARGYARSHAPFRAISLFAHILSSDLFPDDYTFASLLKACAS 131

Query: 404 SKALEEGKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAM 583
           SKALEEG+Q+HC +IK GLH NIYV PTLINMYTEC D+ AAR+VFDKI DPCVV +NAM
Sbjct: 132 SKALEEGRQLHCFAIKCGLHLNIYVCPTLINMYTECNDVDAARRVFDKIPDPCVVVHNAM 191

Query: 584 I 586
           I
Sbjct: 192 I 192



 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C S + L   +Q+  F IK  L  +I V   LIN  T      +D A+++FD+IP
Sbjct: 124 SLLKACASSKALEEGRQLHCFAIKCGLHLNIYVCPTLINMYT--ECNDVDAARRVFDKIP 181

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
            P +V+ N M +GYA++     A+ALF ++  S + P D T  S L +CA   AL+ GK 
Sbjct: 182 DPCVVVHNAMIKGYARSSRPNEALALFRELQASNLKPTDVTMLSALSSCALLGALDLGKW 241

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H    K    + + V   LI+MY +CG L  A  VF+ +       ++AMI+
Sbjct: 242 IHEYVKKNRFDRYVKVNTALIDMYAKCGSLEDAVSVFEDMSVKDTQAWSAMIV 294



 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
 Frame = +2

Query: 47  NNTKETHQSPLSLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTM 217
           +N K T  + LS L  C  L  L   K I  +  K+     + V T LI+      S  +
Sbjct: 214 SNLKPTDVTMLSALSSCALLGALDLGKWIHEYVKKNRFDRYVKVNTALIDMYAKCGS--L 271

Query: 218 DHAQQLFDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKAC 397
           + A  +F+ +   D   ++ M   YA   +  +A+++F ++  + I PD+ TF  LL AC
Sbjct: 272 EDAVSVFEDMSVKDTQAWSAMIVAYATHGNGSKALSMFEEMKKARIRPDEITFLGLLYAC 331

Query: 398 ANSKALEEG-KQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKI 550
           +++  +EEG K  + +S + G+   I     ++++    G L  A +  D++
Sbjct: 332 SHAGFVEEGCKYFYSMSERYGIVPGIKHYGCMVDLLGRSGRLGEAYKFIDEL 383


>ref|XP_007046082.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508710017|gb|EOY01914.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 604

 Score =  247 bits (630), Expect = 2e-63
 Identities = 115/174 (66%), Positives = 153/174 (87%), Gaps = 1/174 (0%)
 Frame = +2

Query: 68  QSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPS-TTMDHAQQLFDQ 244
           Q+PLSLLPKC SLR++KQIQAF IK+ LQ+DI+ LTKLINFCT NP+ T+M++A ++FD+
Sbjct: 30  QNPLSLLPKCASLREVKQIQAFAIKTHLQNDITFLTKLINFCTKNPTFTSMEYAHKVFDK 89

Query: 245 IPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEG 424
           + QPDIVLFNTMARGY+++ +  +A+ L  ++L+ G LPDDYTFPS+LKAC++SKALEEG
Sbjct: 90  VSQPDIVLFNTMARGYSRSNTPTQAIPLVSQLLSFGFLPDDYTFPSVLKACSSSKALEEG 149

Query: 425 KQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           KQ+HCL IK+GL+ NIY+ P+LI+MYTEC DL +AR+VFDK+LDPCV++YNA+I
Sbjct: 150 KQIHCLVIKLGLNHNIYICPSLISMYTECNDLDSARRVFDKMLDPCVISYNAII 203



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           S+L  C+S + L   KQI    IK  L H+I +   LI+  T      +D A+++FD++ 
Sbjct: 135 SVLKACSSSKALEEGKQIHCLVIKLGLNHNIYICPSLISMYT--ECNDLDSARRVFDKML 192

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
            P ++ +N +  GYA+      A++LF ++    + P D T  S+L  CA   AL+ GK 
Sbjct: 193 DPCVISYNAIITGYAKCSRPNEALSLFRELQVKSLKPTDVTMLSVLSCCALLGALDLGKW 252

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H    K G  + I V   +I+MY +CG L  A  VF+ I       ++AMI+
Sbjct: 253 IHEYVNKHGFDKYIKVSTAIIDMYAKCGSLEDAVCVFENITLRDTPAWSAMIV 305


>gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis]
          Length = 594

 Score =  246 bits (628), Expect = 3e-63
 Identities = 120/179 (67%), Positives = 150/179 (83%), Gaps = 1/179 (0%)
 Frame = +2

Query: 53  TKETHQSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTT-MDHAQ 229
           T+    +PLSLLPKC SL +LKQIQAF+IK+ LQ+DISV+ KLINFCTL+P+   M HAQ
Sbjct: 16  TQTNSTTPLSLLPKCTSLMELKQIQAFSIKTHLQNDISVVAKLINFCTLSPTPGFMGHAQ 75

Query: 230 QLFDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSK 409
            LFDQIPQPD+++FNTMARGYA++++ +RA+ALF + L++GILPDDYTFPSLLKACA+SK
Sbjct: 76  HLFDQIPQPDVIVFNTMARGYARSETPLRAIALFAQTLSNGILPDDYTFPSLLKACASSK 135

Query: 410 ALEEGKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           ALEEGKQ+H L++K GL  NIYV PTLINMYT C D+  AR+ FD I +PC+V YNA+I
Sbjct: 136 ALEEGKQLHSLALKHGLGLNIYVCPTLINMYTACNDVHFARRFFDMIDEPCIVMYNAII 194



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C S + L   KQ+ +  +K  L  +I V   LIN  T      +  A++ FD I 
Sbjct: 126 SLLKACASSKALEEGKQLHSLALKHGLGLNIYVCPTLINMYTA--CNDVHFARRFFDMID 183

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           +P IV++N +  GYA+      A+ALF ++  + + P D T  S+L  CA   AL+ G+ 
Sbjct: 184 EPCIVMYNAIITGYARNSLPNEALALFRELQVTEVKPTDVTMLSVLSCCALLGALDLGRW 243

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
            H    K G  + + V   LI+MY +CG L  A  VF+ +       ++ MIM
Sbjct: 244 AHEYVKKNGFGEYVKVNTALIDMYAKCGSLEDAVSVFENMSVKDTQAWSGMIM 296


>ref|XP_007157618.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
           gi|561031033|gb|ESW29612.1| hypothetical protein
           PHAVU_002G084700g [Phaseolus vulgaris]
          Length = 600

 Score =  243 bits (620), Expect = 3e-62
 Identities = 118/177 (66%), Positives = 146/177 (82%), Gaps = 1/177 (0%)
 Frame = +2

Query: 59  ETHQSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPST-TMDHAQQL 235
           E   S LSL+PKC SLR+LKQIQA+TIK+ L +  +VLTKLINFCT NP+T +MD+A Q+
Sbjct: 23  EPSTSLLSLIPKCTSLRELKQIQAYTIKTHLHNSGTVLTKLINFCTCNPTTASMDYAHQM 82

Query: 236 FDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKAL 415
           FDQIPQPDIVLFNTMARGYA+    +RA+ LF ++L SG+LPDDYTF SL KACA  KA+
Sbjct: 83  FDQIPQPDIVLFNTMARGYARFDDPLRAILLFSQVLFSGLLPDDYTFSSLFKACARLKAI 142

Query: 416 EEGKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           +EGKQ+HCL++K+G+  N+YV PTLINMYT C D+ AAR+VFDKI +PCVV YNA+I
Sbjct: 143 QEGKQLHCLAVKLGVSGNMYVCPTLINMYTACNDMDAARRVFDKIDEPCVVAYNAII 199



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SL   C  L+ +   KQ+    +K  +  ++ V   LIN  T      MD A+++FD+I 
Sbjct: 131 SLFKACARLKAIQEGKQLHCLAVKLGVSGNMYVCPTLINMYTA--CNDMDAARRVFDKID 188

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           +P +V +N +    A++     A+ALF ++  SG+ P D T    L +CA   AL+ GK 
Sbjct: 189 EPCVVAYNAIISSCARSSQPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGKW 248

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H    K G  + + V   LI+MY +CG L  A  VF ++       ++AMI+
Sbjct: 249 IHEYVKKNGFDKYVKVNTALIDMYAKCGSLEDAVSVFREMPRRDTQAWSAMIV 301


>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Fragaria vesca subsp. vesca]
          Length = 593

 Score =  242 bits (618), Expect = 5e-62
 Identities = 118/181 (65%), Positives = 149/181 (82%), Gaps = 1/181 (0%)
 Frame = +2

Query: 47  NNTKETHQSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPS-TTMDH 223
           ++ K   QS +SL+PKC SL QL+QIQAF+IK+ LQ+D+SVL+KLIN CTLNP+ T+MD+
Sbjct: 12  SHPKAHTQSRISLIPKCTSLTQLQQIQAFSIKTHLQYDLSVLSKLINSCTLNPTATSMDY 71

Query: 224 AQQLFDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACAN 403
           A QLFDQIP PDIV+FNTMARGY+++ +  RA++LF ++L+SGI PDDYTFP+LLKACA 
Sbjct: 72  AHQLFDQIPHPDIVVFNTMARGYSRSTTPFRAISLFSQVLSSGIFPDDYTFPALLKACAA 131

Query: 404 SKALEEGKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAM 583
            KALEEGKQ+HC  IK G+  NI+V P LINMYTEC  +  ARQVFDK+ +PCVV +NAM
Sbjct: 132 CKALEEGKQLHCYVIKCGMQLNIFVCPALINMYTECSAVDVARQVFDKMPEPCVVVHNAM 191

Query: 584 I 586
           I
Sbjct: 192 I 192



 Score =  100 bits (248), Expect = 4e-19
 Identities = 61/176 (34%), Positives = 95/176 (53%)
 Frame = +2

Query: 62  THQSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFD 241
           T  + L     C +L + KQ+  + IK  +Q +I V   LIN  T    + +D A+Q+FD
Sbjct: 121 TFPALLKACAACKALEEGKQLHCYVIKCGMQLNIFVCPALINMYT--ECSAVDVARQVFD 178

Query: 242 QIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEE 421
           ++P+P +V+ N M  GYA+      A+ALF ++  SG+ P D T  S L +CA   AL+ 
Sbjct: 179 KMPEPCVVVHNAMITGYARNSRPNEALALFRELQASGLKPTDVTMLSALSSCALLGALDL 238

Query: 422 GKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           GK +H    K    + + V   LI+MY++CG L  A  VF+ +       ++AMI+
Sbjct: 239 GKWIHEYVKKNRFDRYVKVNTALIDMYSKCGSLEDAVSVFENMSVKDTQAWSAMIV 294


>ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citrus clementina]
           gi|568859243|ref|XP_006483151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Citrus sinensis]
           gi|557540892|gb|ESR51936.1| hypothetical protein
           CICLE_v10031011mg [Citrus clementina]
          Length = 598

 Score =  238 bits (608), Expect = 7e-61
 Identities = 114/173 (65%), Positives = 149/173 (86%), Gaps = 3/173 (1%)
 Frame = +2

Query: 77  LSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTT-MDHAQQLFDQIPQ 253
           LSLLP+C S R LKQI A TIK+ LQ+D++VLTKLINFCT NP+T+ M+HA  LFD+IP+
Sbjct: 25  LSLLPRCTSFRGLKQIHAVTIKTHLQNDLNVLTKLINFCTQNPTTSSMEHAHLLFDRIPE 84

Query: 254 PDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACA--NSKALEEGK 427
           PDIVLFNTMARGY+++++ IRA+ LFV++LNSG+LPDDY+FPSLLKACA   ++ALEEGK
Sbjct: 85  PDIVLFNTMARGYSRSKTPIRAIFLFVELLNSGLLPDDYSFPSLLKACACVGAEALEEGK 144

Query: 428 QVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           Q+HC +IK+GL+ N+YV  TLIN+Y EC D+ AAR++F+ I +PCVV+YNA+I
Sbjct: 145 QLHCFAIKLGLNSNLYVCTTLINLYAECSDVEAARRIFENISEPCVVSYNAII 197



 Score = 86.7 bits (213), Expect = 4e-15
 Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
 Frame = +2

Query: 80  SLLPKC-----NSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQ 244
           SLL  C      +L + KQ+  F IK  L  ++ V T LIN       + ++ A+++F+ 
Sbjct: 127 SLLKACACVGAEALEEGKQLHCFAIKLGLNSNLYVCTTLINLYA--ECSDVEAARRIFEN 184

Query: 245 IPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEG 424
           I +P +V +N +   YA++     A++LF ++    + P D T  S L +CA   +L+ G
Sbjct: 185 ISEPCVVSYNAIITAYARSSRPNEALSLFRELQERNLKPTDVTMLSALSSCALLGSLDLG 244

Query: 425 KQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           K +H    K GL + + V   LI+M+ +CG L  A  VFD +       ++AMI+
Sbjct: 245 KWIHEYIKKYGLDKYVKVNTALIDMHAKCGRLDDAVSVFDNMSGKDTQAWSAMIV 299


>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  236 bits (602), Expect = 4e-60
 Identities = 117/173 (67%), Positives = 145/173 (83%), Gaps = 1/173 (0%)
 Frame = +2

Query: 71  SPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPS-TTMDHAQQLFDQI 247
           S LSL+PKC SLR+LKQIQA+TIK+  Q++ +VLTKLINFCT NP+  +MDHA ++FD+I
Sbjct: 37  SILSLIPKCTSLRELKQIQAYTIKTH-QNNPTVLTKLINFCTSNPTIASMDHAHRMFDKI 95

Query: 248 PQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGK 427
           PQPDIVLFNTMARGYA+    +RA+ L  ++L SG+LPDDYTF SLLKACA  KALEEGK
Sbjct: 96  PQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEGK 155

Query: 428 QVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           Q+HCL++K+G+  N+YV PTLINMYT C D+ AAR+VFDKI +PCVV YNA+I
Sbjct: 156 QLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAII 208



 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C  L+ L   KQ+    +K  +  ++ V   LIN  T      +D A+++FD+I 
Sbjct: 140 SLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTA--CNDVDAARRVFDKIG 197

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           +P +V +N +    A+      A+ALF ++  SG+ P D T    L +CA   AL+ G+ 
Sbjct: 198 EPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRW 257

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H    K G  Q + V   LI+MY +CG L  A  VF  +       ++AMI+
Sbjct: 258 IHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIV 310


>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
           gi|449478665|ref|XP_004155385.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  235 bits (600), Expect = 6e-60
 Identities = 115/172 (66%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
 Frame = +2

Query: 74  PLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTT-MDHAQQLFDQIP 250
           PLSLL KC SL +LKQIQA+TIK++LQ DISVLTKLINFCTLNP+T+ MDHA  LFDQI 
Sbjct: 32  PLSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQIL 91

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
             DI+LFN MARGYA++ S   A +LF ++L SG+LPDDYTF SLLKACA+SKAL EG  
Sbjct: 92  DKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMG 151

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           +HC ++K+GL+ NIY+ PTLINMY EC D++AAR VFD++  PC+V+YNA+I
Sbjct: 152 LHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAII 203



 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKCNSLRQLKQ---IQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C S + L++   +  F +K  L H+I +   LIN         M+ A+ +FD++ 
Sbjct: 135 SLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYA--ECNDMNAARGVFDEME 192

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           QP IV +N +  GYA++     A++LF ++  S I P D T  S++ +CA   AL+ GK 
Sbjct: 193 QPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKW 252

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H    K G  + + V   LI+M+ +CG L+ A  +F+ +       ++AMI+
Sbjct: 253 IHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIV 305


>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222865177|gb|EEF02308.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 601

 Score =  235 bits (600), Expect = 6e-60
 Identities = 110/173 (63%), Positives = 147/173 (84%), Gaps = 1/173 (0%)
 Frame = +2

Query: 71  SPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPST-TMDHAQQLFDQI 247
           S LS LPKC SL++LKQIQAF+IK+ LQ+D+ +LTKLIN CT NP+T +MD+A QLF+ I
Sbjct: 28  SLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEAI 87

Query: 248 PQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGK 427
           PQPDIVLFN+M RGY+++ + ++A++LF+K LN  +LPDDYTFPSLLKAC  +KA ++GK
Sbjct: 88  PQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGK 147

Query: 428 QVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           Q+HCL+IK+GL++N YV PTLINMY  C D+  A++VFD+IL+PCVV+YNA+I
Sbjct: 148 QLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAII 200



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 58/173 (33%), Positives = 91/173 (52%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKC---NSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C    + +Q KQ+    IK  L  +  V   LIN         +D AQ++FD+I 
Sbjct: 132 SLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYA--GCNDVDGAQRVFDEIL 189

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           +P +V +N +  GYA++     A++LF ++    + P+D T  S+L +CA   AL+ GK 
Sbjct: 190 EPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKW 249

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H    K GL + + V   LI+MY +CG L  A  VF+ +       ++AMI+
Sbjct: 250 IHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIV 302


>ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Solanum tuberosum]
          Length = 605

 Score =  227 bits (579), Expect = 2e-57
 Identities = 113/184 (61%), Positives = 144/184 (78%), Gaps = 3/184 (1%)
 Frame = +2

Query: 47  NNTKETHQ--SPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTT-M 217
           N+ K+T     PL+L+PKC SLR LKQIQAF+IK+ +Q+DI  ++KLINFCT NP+   M
Sbjct: 22  NSRKDTFTPIDPLALVPKCKSLRDLKQIQAFSIKTQMQNDIFFMSKLINFCTKNPTPAFM 81

Query: 218 DHAQQLFDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKAC 397
            HA  LFD+IPQP+IVLFN +A GYA++ + + A  LF+KIL  G++PD YTFPSLLKAC
Sbjct: 82  YHAHLLFDKIPQPNIVLFNFLAHGYARSDTPLNAFVLFLKILTLGVVPDFYTFPSLLKAC 141

Query: 398 ANSKALEEGKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYN 577
           A ++ALEEGKQ+HCL IK GL  ++YV P L+NMY EC D  +AR+VFD+I DPCVVTYN
Sbjct: 142 AGAEALEEGKQLHCLLIKYGLKGDMYVCPALMNMYIECKDNGSARRVFDRIADPCVVTYN 201

Query: 578 AMIM 589
           A+IM
Sbjct: 202 AIIM 205



 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
 Frame = +2

Query: 80  SLLPKC---NSLRQLKQIQAFTIKSDLQHDISVLTKLINF---CTLNPSTTMDHAQQLFD 241
           SLL  C    +L + KQ+    IK  L+ D+ V   L+N    C  N S     A+++FD
Sbjct: 136 SLLKACAGAEALEEGKQLHCLLIKYGLKGDMYVCPALMNMYIECKDNGS-----ARRVFD 190

Query: 242 QIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEE 421
           +I  P +V +N +  GY ++    +A+ LF ++    I P D T   ++ +CA    L  
Sbjct: 191 RIADPCVVTYNAIIMGYVRSSEPNKALLLFRELQVKKIKPSDVTILGVVSSCALLGTLGF 250

Query: 422 GKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           GK VH    K G  Q + V   LI+MY +CG L+ A  VF+ + +     ++AMIM
Sbjct: 251 GKWVHEYVKKNGFDQYVKVNTALIDMYAKCGSLADAISVFESMRNRDTQAWSAMIM 306


>ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Solanum lycopersicum]
          Length = 605

 Score =  226 bits (577), Expect = 3e-57
 Identities = 114/184 (61%), Positives = 144/184 (78%), Gaps = 3/184 (1%)
 Frame = +2

Query: 47  NNTKETHQ--SPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTT-M 217
           N+ K+T     PL+L+PKC SLR LKQIQAF+IK+ LQ+DI  ++KLINFCT NP+   M
Sbjct: 22  NSRKDTFTPIDPLALVPKCKSLRDLKQIQAFSIKTQLQNDIFFMSKLINFCTKNPTPACM 81

Query: 218 DHAQQLFDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKAC 397
            HA  LFD+IPQPDIVLFN +ARGYA + + + A  LF+KIL  G++PD YTFPSLLKAC
Sbjct: 82  YHAHLLFDKIPQPDIVLFNFLARGYAHSDTPLNAFVLFLKILTLGVVPDFYTFPSLLKAC 141

Query: 398 ANSKALEEGKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYN 577
           A ++ALEEGKQ+HCL IK GL+ ++YV P L+NMY E  D  +AR+VFD+I DPCVVTYN
Sbjct: 142 AGAEALEEGKQLHCLLIKYGLNGDMYVCPALMNMYIEFKDNDSARRVFDRIADPCVVTYN 201

Query: 578 AMIM 589
           A+I+
Sbjct: 202 AIII 205



 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKC---NSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C    +L + KQ+    IK  L  D+ V   L+N          D A+++FD+I 
Sbjct: 136 SLLKACAGAEALEEGKQLHCLLIKYGLNGDMYVCPALMNMYIEFKDN--DSARRVFDRIA 193

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
            P +V +N +  GY ++     A+ LF ++    I P D T   ++ +CA    L  GK 
Sbjct: 194 DPCVVTYNAIIIGYVRSSEPNEALLLFRELQVKKIKPTDVTILGVVSSCALLGTLGFGKW 253

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           VH    K    Q + V   LI+MY +CG L+ A  VF+ +       ++AMIM
Sbjct: 254 VHEYIKKNSFDQYVKVNTALIDMYAKCGSLADAISVFESMPYRDTQAWSAMIM 306


>ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cicer arietinum]
          Length = 602

 Score =  226 bits (576), Expect = 4e-57
 Identities = 107/172 (62%), Positives = 139/172 (80%), Gaps = 1/172 (0%)
 Frame = +2

Query: 77  LSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPST-TMDHAQQLFDQIPQ 253
           LS +PKC +L++LKQIQA+TIK+   ++ + +TKLINFCT  P+T +MD+A QLFD+I  
Sbjct: 31  LSFIPKCTTLKELKQIQAYTIKTHQHNNTNFITKLINFCTSKPTTASMDYAHQLFDKITL 90

Query: 254 PDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQV 433
           PDIVLFN+MARGYA+    +RA+ LF  +L +G+LPDDYTF SLLK C+  KALEEGKQ+
Sbjct: 91  PDIVLFNSMARGYARFNDPLRAIILFSHVLCNGLLPDDYTFSSLLKVCSKVKALEEGKQL 150

Query: 434 HCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           HC ++K+G+  N+YV PTLINMYT CGD+ AAR+VFDKI +PCVV YNA+IM
Sbjct: 151 HCFALKLGVGNNMYVVPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIM 202



 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 53/176 (30%), Positives = 90/176 (51%)
 Frame = +2

Query: 62  THQSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFD 241
           T  S L +  K  +L + KQ+  F +K  + +++ V+  LIN  T      +D A+++FD
Sbjct: 130 TFSSLLKVCSKVKALEEGKQLHCFALKLGVGNNMYVVPTLINMYT--SCGDIDAARRVFD 187

Query: 242 QIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEE 421
           +I +P +V +N +    A+      A+ALF  +  SG+   D T   +L +CA   +L+ 
Sbjct: 188 KIDEPCVVAYNAIIMSLARNSQPNEALALFRDLQESGLKATDVTMLVVLSSCALLGSLDL 247

Query: 422 GKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           G+ +H    K G  + + V   LI+MY +CG L  A  VF  +       ++AMI+
Sbjct: 248 GRWMHEYVKKNGFDRYVKVNTALIDMYAKCGSLDDAFNVFRDMPKRDTQAWSAMII 303


>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
           gi|557092383|gb|ESQ33030.1| hypothetical protein
           EUTSA_v10003852mg [Eutrema salsugineum]
          Length = 605

 Score =  223 bits (569), Expect = 2e-56
 Identities = 109/174 (62%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
 Frame = +2

Query: 71  SPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTT-MDHAQQLFDQI 247
           +P+ L+ +C SLR+L QIQ + IKS L  D+S +TKLINFCT  P+T+ M +A+QLFD +
Sbjct: 31  NPILLISRCTSLRELMQIQGYAIKSHLHEDVSFITKLINFCTEYPTTSSMSYARQLFDAM 90

Query: 248 PQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSG-ILPDDYTFPSLLKACANSKALEEG 424
           P+PDIV+FN+MARGY+++ + + A +LFV+IL    +LPD YTFPSLLKACA +KALEEG
Sbjct: 91  PEPDIVVFNSMARGYSRSTTPLEAFSLFVEILEDDYLLPDGYTFPSLLKACAAAKALEEG 150

Query: 425 KQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           +Q+HCLS+K+GL  NIYV PTLINMYTEC D+ AAR VFD I++PCVV+YNAMI
Sbjct: 151 RQLHCLSMKLGLDDNIYVCPTLINMYTECEDVDAARCVFDGIVEPCVVSYNAMI 204



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C + + L   +Q+   ++K  L  +I V   LIN  T      +D A+ +FD I 
Sbjct: 136 SLLKACAAAKALEEGRQLHCLSMKLGLDDNIYVCPTLINMYT--ECEDVDAARCVFDGIV 193

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           +P +V +N M  GYA+      A++LF ++    + P++ T  S+L +C+   +L+ GK 
Sbjct: 194 EPCVVSYNAMITGYARRNRPNEALSLFREMQGKNLKPNEVTLLSVLSSCSLLGSLDLGKW 253

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H  + K G  + + V   LI+M+ +CG L  A  +F+++       ++AMI+
Sbjct: 254 IHEYAKKHGFCKYVKVITALIDMFAKCGSLDDAVSLFERMRHKDTQAWSAMIV 306



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
 Frame = +2

Query: 50  NTKETHQSPLSLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMD 220
           N K    + LS+L  C+ L  L   K I  +  K      + V+T LI+      S  +D
Sbjct: 227 NLKPNEVTLLSVLSSCSLLGSLDLGKWIHEYAKKHGFCKYVKVITALIDMFAKCGS--LD 284

Query: 221 HAQQLFDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACA 400
            A  LF+++   D   ++ M   YA    + +++ +F ++ +  + PD+ TF  LL AC+
Sbjct: 285 DAVSLFERMRHKDTQAWSAMIVAYANHGQAEKSMLMFERMRSENVQPDEITFLGLLNACS 344

Query: 401 NSKALEEGKQVHCLSI-KIGLHQNIYVQPTLINMYTECGDLSAARQVFDKI 550
           ++  +EEG++     + + G+  +I    +++++    G L  A +  DK+
Sbjct: 345 HAGLVEEGREYFSRMVNEYGIVPSIKHYGSMVDLLGRAGHLDDAYRFIDKL 395


>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
          Length = 603

 Score =  223 bits (567), Expect = 4e-56
 Identities = 106/174 (60%), Positives = 144/174 (82%), Gaps = 1/174 (0%)
 Frame = +2

Query: 68  QSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPS-TTMDHAQQLFDQ 244
           Q+P+ L+ KCNSLR+L QIQA+ IKS ++ D+S + KLINFCT +P+ ++M +A+ LF+ 
Sbjct: 30  QNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEA 88

Query: 245 IPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEG 424
           + +PDIV+FN+MARGY++  + +   +LFV+IL  GILPD+YTFPSLLKACA +KALEEG
Sbjct: 89  MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148

Query: 425 KQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           +Q+HCLS+K+GL  N+YV PTLINMYTEC D+ +AR VFD+I++PCVV YNAMI
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARXVFDRIVEPCVVCYNAMI 202



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKC---NSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C    +L + +Q+   ++K  L  ++ V   LIN  T      +D A+ +FD+I 
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT--ECEDVDSARXVFDRIV 191

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           +P +V +N M  GYA+      A++LF ++    + P++ T  S+L +CA   +L+ GK 
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H  + K    + + V   LI+M+ +CG L  A  +F+K+       ++AMI+
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
 Frame = +2

Query: 77  LSLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQI 247
           LS+L  C  L  L   K I  +  K      + V T LI+      S  +D A  +F+++
Sbjct: 234 LSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS--LDDAVSIFEKM 291

Query: 248 PQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGK 427
              D   ++ M   YA    + +++ +F ++ +  + PD+ TF  LL AC+++  +EEG+
Sbjct: 292 RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGR 351

Query: 428 QVHCLSI-KIGLHQNIYVQPTLINMYTECGDLSAARQVFDKI 550
           +     + K G+  +I    +++++ +  G+L  A +  DK+
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSXAGNLEDAYEFIDKL 393


>ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]
           gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g02980 gi|3461822|gb|AAC32916.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250557|gb|AEC05651.1| RNA
           editing factor OTP85 [Arabidopsis thaliana]
          Length = 603

 Score =  222 bits (565), Expect = 7e-56
 Identities = 106/174 (60%), Positives = 144/174 (82%), Gaps = 1/174 (0%)
 Frame = +2

Query: 68  QSPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPS-TTMDHAQQLFDQ 244
           Q+P+ L+ KCNSLR+L QIQA+ IKS ++ D+S + KLINFCT +P+ ++M +A+ LF+ 
Sbjct: 30  QNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEA 88

Query: 245 IPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEG 424
           + +PDIV+FN+MARGY++  + +   +LFV+IL  GILPD+YTFPSLLKACA +KALEEG
Sbjct: 89  MSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEG 148

Query: 425 KQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           +Q+HCLS+K+GL  N+YV PTLINMYTEC D+ +AR VFD+I++PCVV YNAMI
Sbjct: 149 RQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI 202



 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKC---NSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C    +L + +Q+   ++K  L  ++ V   LIN  T      +D A+ +FD+I 
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT--ECEDVDSARCVFDRIV 191

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           +P +V +N M  GYA+      A++LF ++    + P++ T  S+L +CA   +L+ GK 
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H  + K    + + V   LI+M+ +CG L  A  +F+K+       ++AMI+
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIV 304



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 4/162 (2%)
 Frame = +2

Query: 77  LSLLPKCNSLRQL---KQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQI 247
           LS+L  C  L  L   K I  +  K      + V T LI+      S  +D A  +F+++
Sbjct: 234 LSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGS--LDDAVSIFEKM 291

Query: 248 PQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGK 427
              D   ++ M   YA    + +++ +F ++ +  + PD+ TF  LL AC+++  +EEG+
Sbjct: 292 RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGR 351

Query: 428 QVHCLSI-KIGLHQNIYVQPTLINMYTECGDLSAARQVFDKI 550
           +     + K G+  +I    +++++ +  G+L  A +  DK+
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL 393


>ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Capsella rubella]
           gi|482559454|gb|EOA23645.1| hypothetical protein
           CARUB_v10016843mg [Capsella rubella]
          Length = 630

 Score =  218 bits (555), Expect = 1e-54
 Identities = 102/173 (58%), Positives = 140/173 (80%), Gaps = 1/173 (0%)
 Frame = +2

Query: 71  SPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPS-TTMDHAQQLFDQI 247
           +P+  + +C SLR+L QIQ + IKS L  D+S +TKLINFCT +P+ ++M +A+ LFD +
Sbjct: 57  NPILQISRCKSLRELMQIQGYAIKSHLHEDVSFITKLINFCTESPTESSMSYARHLFDAM 116

Query: 248 PQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGK 427
            +PDIV+FN+MARGY+++ + + A +LF +IL   +LPD+YTFPSLLKACA +KALEEG+
Sbjct: 117 SEPDIVIFNSMARGYSRSTTPLDAFSLFAEILGGDLLPDNYTFPSLLKACAVAKALEEGR 176

Query: 428 QVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           Q+HCLS+K+GL  N+YV PTLINMYTEC D+ +AR VFD+I++PCVV YNAMI
Sbjct: 177 QLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI 229



 Score = 82.0 bits (201), Expect = 1e-13
 Identities = 52/173 (30%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKC---NSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C    +L + +Q+   ++K  L  ++ V   LIN  T      +D A+ +FD+I 
Sbjct: 161 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT--ECEDVDSARCVFDRIV 218

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           +P +V +N M  GYA+      A++LF ++    + P++ T  S+L +CA   +L+ GK 
Sbjct: 219 EPCVVCYNAMITGYAKRNRPNEALSLFREMQGKSLKPNEITLLSVLSSCALLGSLDLGKW 278

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H  + K    + + V   LI+M+ +CG L  A  +F+K+       ++AMI+
Sbjct: 279 IHEYAKKHEFCKYVKVNTALIDMFAKCGSLDDAVSLFEKMRYKDTQAWSAMIV 331


>ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321020|gb|EFH51441.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 605

 Score =  214 bits (546), Expect = 1e-53
 Identities = 104/173 (60%), Positives = 140/173 (80%), Gaps = 1/173 (0%)
 Frame = +2

Query: 71  SPLSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPS-TTMDHAQQLFDQI 247
           +P+ L+ KCNS R+L QIQA+ IKS  Q D+S  TKLINFCT +P+ ++M +A+ LFD +
Sbjct: 33  NPILLISKCNSERELMQIQAYAIKSH-QEDVSFNTKLINFCTESPTESSMSYARHLFDAM 91

Query: 248 PQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGK 427
            +PDIV+FN++ARGY+++ + +    LFV+IL   +LPD+YTFPSLLKACA +KALEEG+
Sbjct: 92  SEPDIVIFNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGR 151

Query: 428 QVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMI 586
           Q+HCLS+K+G+  N+YV PTLINMYTEC D+ AAR VFD+I++PCVV YNAMI
Sbjct: 152 QLHCLSMKLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMI 204



 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 3/173 (1%)
 Frame = +2

Query: 80  SLLPKC---NSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIP 250
           SLL  C    +L + +Q+   ++K  +  ++ V   LIN  T      +D A+ +FD+I 
Sbjct: 136 SLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINMYT--ECEDVDAARCVFDRIV 193

Query: 251 QPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQ 430
           +P +V +N M  GYA+      A++LF ++    + P++ T  S+L +CA   +L+ GK 
Sbjct: 194 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKW 253

Query: 431 VHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTYNAMIM 589
           +H  + K G  + + V   LI+M+ +CG L  A  +F+ +       ++AMI+
Sbjct: 254 IHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRYKDTQAWSAMIV 306


>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515122|gb|AES96745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  192 bits (487), Expect = 8e-47
 Identities = 98/185 (52%), Positives = 131/185 (70%), Gaps = 5/185 (2%)
 Frame = +2

Query: 50  NTKETHQSPL----SLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPS-TT 214
           NT+ T   PL    SL+PKC +L++LKQIQA+TIK++ Q++ +V+TK INFCT NP+  +
Sbjct: 17  NTETTSLLPLPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKAS 76

Query: 215 MDHAQQLFDQIPQPDIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKA 394
           M+HA QLFDQI QP+IVLFNTMARGYA+    +R +  F + L               + 
Sbjct: 77  MEHAHQLFDQITQPNIVLFNTMARGYARLNDPLRMITHFRRCL---------------RL 121

Query: 395 CANSKALEEGKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTY 574
            +  KAL EGKQ+HC ++K+G+  N+YV PTLINMYT CGD+ A+R+VFDKI +PCVV Y
Sbjct: 122 VSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAY 181

Query: 575 NAMIM 589
           NA+IM
Sbjct: 182 NAIIM 186



 Score = 83.2 bits (204), Expect = 5e-14
 Identities = 49/155 (31%), Positives = 84/155 (54%)
 Frame = +2

Query: 77  LSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIPQP 256
           L L+ K  +L + KQ+  F +K  +  ++ V+  LIN  T      +D ++++FD+I +P
Sbjct: 119 LRLVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTA--CGDIDASRRVFDKIDEP 176

Query: 257 DIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQVH 436
            +V +N +    A+   +  A+ALF ++   G+ P D T   +L +CA   +L+ G+ +H
Sbjct: 177 CVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMH 236

Query: 437 CLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVF 541
               K G  + + V  TLI+MY +CG L  A  VF
Sbjct: 237 EYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVF 271


>ref|XP_006827256.1| hypothetical protein AMTR_s00010p00262470 [Amborella trichopoda]
           gi|548831685|gb|ERM94493.1| hypothetical protein
           AMTR_s00010p00262470 [Amborella trichopoda]
          Length = 354

 Score =  184 bits (468), Expect = 1e-44
 Identities = 92/171 (53%), Positives = 129/171 (75%), Gaps = 1/171 (0%)
 Frame = +2

Query: 77  LSLLPKCNSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTMDHAQQLFDQIPQP 256
           LSLL +C +L QLKQIQA TIK+ LQ+    L+KL +FC+L+    +++AQQLFDQIP+P
Sbjct: 29  LSLLSRCATLSQLKQIQANTIKTHLQNHAPTLSKLASFCSLSLPEHIEYAQQLFDQIPEP 88

Query: 257 DIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKACANSKALEEGKQVH 436
           + VLFNT+ R Y+++ + I+A+ LFVK+L + I PD+YTFPS+LKACA + ALEEG+ +H
Sbjct: 89  NTVLFNTLIRSYSRSHTPIQAINLFVKMLTNNIQPDNYTFPSILKACAMASALEEGRALH 148

Query: 437 CLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKIL-DPCVVTYNAMI 586
           C  IK+ L  NI+VQPTLI MY +CG + +A++VF+  +    VV YN+MI
Sbjct: 149 CHCIKLELDSNIFVQPTLIRMYADCGAIESAQKVFNATMKGRSVVLYNSMI 199



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 4/185 (2%)
 Frame = +2

Query: 47  NNTKETHQSPLSLLPKC---NSLRQLKQIQAFTIKSDLQHDISVLTKLINFCTLNPSTTM 217
           NN +  + +  S+L  C   ++L + + +    IK +L  +I V   LI          +
Sbjct: 119 NNIQPDNYTFPSILKACAMASALEEGRALHCHCIKLELDSNIFVQPTLIRMYA--DCGAI 176

Query: 218 DHAQQLFDQIPQP-DIVLFNTMARGYAQTQSSIRAVALFVKILNSGILPDDYTFPSLLKA 394
           + AQ++F+   +   +VL+N+M   Y Q      A+ALF ++      P+D T  S+L A
Sbjct: 177 ESAQKVFNATMKGRSVVLYNSMITAYVQRSRPNEALALFREMQAHNTPPNDVTVLSVLSA 236

Query: 395 CANSKALEEGKQVHCLSIKIGLHQNIYVQPTLINMYTECGDLSAARQVFDKILDPCVVTY 574
           C+   A++ GK VH    K GL   + V   LI+MY +CG +  A+ VF+K+       +
Sbjct: 237 CSLLGAVDLGKWVHEFVKKNGLDMFVKVNTALIDMYAKCGSIEDAKMVFEKMPFRDTQAW 296

Query: 575 NAMIM 589
           +AMI+
Sbjct: 297 SAMIV 301