BLASTX nr result

ID: Akebia23_contig00044910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00044910
         (380 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    46   3e-06
gb|EMS53744.1| F-box/LRR-repeat protein 4 [Triticum urartu]            46   3e-06
gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]                  46   3e-06
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    42   4e-06
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    48   4e-06
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                46   5e-06
gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii]     45   8e-06

>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = -2

Query: 139 CKKKKNPVELVDETSEGVNTKLEVLRAALESKVFRASGTKIEYVKC 2
           C    + V LVD++  GVN KLE+ R  LESK FR S TK EY+ C
Sbjct: 258 CMLFADDVVLVDDSRTGVNRKLELWRQTLESKGFRLSRTKTEYMMC 303



 Score = 30.4 bits (67), Expect(2) = 3e-06
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 254 FHLQLIYLRDSTLSLYLFAIVMDEVTIHIQ 165
           F +++   + S LS YLFA+VMDEVT  IQ
Sbjct: 223 FPIKIGLHQGSALSPYLFALVMDEVTRDIQ 252


>gb|EMS53744.1| F-box/LRR-repeat protein 4 [Triticum urartu]
          Length = 795

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = -2

Query: 139 CKKKKNPVELVDETSEGVNTKLEVLRAALESKVFRASGTKIEYVKC 2
           C    + V LVD++  GVN KLE+ R  LESK FR S TK EY+ C
Sbjct: 562 CMLFADDVVLVDDSRTGVNRKLELWRQTLESKGFRLSRTKTEYMMC 607



 Score = 30.4 bits (67), Expect(2) = 3e-06
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 254 FHLQLIYLRDSTLSLYLFAIVMDEVTIHIQ 165
           F +++   + S LS YLFA+VMDEVT  IQ
Sbjct: 527 FPIKIGLHQGSALSPYLFALVMDEVTRDIQ 556


>gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]
          Length = 589

 Score = 46.2 bits (108), Expect(2) = 3e-06
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = -2

Query: 139 CKKKKNPVELVDETSEGVNTKLEVLRAALESKVFRASGTKIEYVKC 2
           C    + V LVD++  GVN KLE+ R  LESK FR S TK EY+ C
Sbjct: 501 CMLFADDVVLVDDSRTGVNRKLELWRQTLESKGFRLSRTKTEYMMC 546



 Score = 30.4 bits (67), Expect(2) = 3e-06
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 254 FHLQLIYLRDSTLSLYLFAIVMDEVTIHIQ 165
           F +++   + S LS YLFA+VMDEVT  IQ
Sbjct: 466 FPIKIGLHQGSALSPYLFALVMDEVTRDIQ 495


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 42.4 bits (98), Expect(2) = 4e-06
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = -2

Query: 118 VELVDETSEGVNTKLEVLRAALESKVFRASGTKIEYVKC 2
           + L+DET EGVN KL + R  LESK    S +K EY++C
Sbjct: 401 IVLIDETQEGVNAKLNLWREVLESKGLCLSRSKTEYMEC 439



 Score = 33.9 bits (76), Expect(2) = 4e-06
 Identities = 17/32 (53%), Positives = 24/32 (75%)
 Frame = -1

Query: 257 SFHLQLIYLRDSTLSLYLFAIVMDEVTIHIQE 162
           SF + +   + S+LS YLFA+VMDE+T HIQ+
Sbjct: 358 SFPITVGLHQGSSLSPYLFALVMDELTGHIQD 389


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 48.1 bits (113), Expect(2) = 4e-06
 Identities = 25/46 (54%), Positives = 30/46 (65%)
 Frame = -2

Query: 139 CKKKKNPVELVDETSEGVNTKLEVLRAALESKVFRASGTKIEYVKC 2
           C    + V LVD++  GVN KLE+ R  LESK FR S TK EY+KC
Sbjct: 308 CMLFADDVVLVDDSRTGVNRKLELWRQILESKGFRLSRTKTEYMKC 353



 Score = 28.1 bits (61), Expect(2) = 4e-06
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -1

Query: 254 FHLQLIYLRDSTLSLYLFAIVMDEVTIHIQ 165
           F +++   + S LS YLF +VMDEVT  IQ
Sbjct: 273 FPIKIGLHQGSALSPYLFDLVMDEVTRDIQ 302


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 46.2 bits (108), Expect(2) = 5e-06
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = -2

Query: 139 CKKKKNPVELVDETSEGVNTKLEVLRAALESKVFRASGTKIEYVKC 2
           C    + + L+DET + VN +LEV R  LESK FR S TK EY+ C
Sbjct: 434 CMLFADDIVLIDETRDRVNARLEVWRQTLESKGFRLSRTKTEYLGC 479



 Score = 29.6 bits (65), Expect(2) = 5e-06
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = -1

Query: 254 FHLQLIYLRDSTLSLYLFAIVMDEVTIHIQE 162
           F +++   + S LS +LFA+VMDE+T  IQE
Sbjct: 399 FPVEIGLHQGSVLSPFLFALVMDELTRSIQE 429


>gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii]
          Length = 571

 Score = 44.7 bits (104), Expect(2) = 8e-06
 Identities = 23/46 (50%), Positives = 28/46 (60%)
 Frame = -2

Query: 139 CKKKKNPVELVDETSEGVNTKLEVLRAALESKVFRASGTKIEYVKC 2
           C    + V LVD++  G N KLE+ R  LESK FR S TK EY+ C
Sbjct: 273 CMLFADDVVLVDDSRTGANRKLELWRQTLESKGFRLSRTKTEYMMC 318



 Score = 30.4 bits (67), Expect(2) = 8e-06
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -1

Query: 254 FHLQLIYLRDSTLSLYLFAIVMDEVTIHIQ 165
           F +++   + S LS YLFA+VMDEVT  IQ
Sbjct: 238 FPIKIGLHQGSALSPYLFALVMDEVTRDIQ 267


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