BLASTX nr result
ID: Akebia23_contig00043086
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00043086
(315 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 95 1e-17
ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_007015694.1| Tetratricopeptide repeat (TPR)-like superfam... 90 4e-16
ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
emb|CBI24422.3| unnamed protein product [Vitis vinifera] 87 3e-15
gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis] 85 1e-14
ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containi... 83 3e-14
gb|EYU20651.1| hypothetical protein MIMGU_mgv1a0263782mg, partia... 82 6e-14
ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
ref|XP_002523876.1| pentatricopeptide repeat-containing protein,... 80 2e-13
ref|XP_006417992.1| hypothetical protein EUTSA_v10009524mg [Eutr... 77 2e-12
ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata] gi... 74 2e-11
gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya... 73 5e-11
ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
ref|XP_007150033.1| hypothetical protein PHAVU_005G120400g [Phas... 71 1e-10
ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
ref|XP_006303598.1| hypothetical protein CARUB_v10011161mg [Caps... 70 2e-10
ref|NP_172066.3| pentatricopeptide repeat protein PDE247 [Arabid... 70 3e-10
>ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = -3
Query: 166 SIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFPS 2
S+D V WTSS+AR CRNG LS+AAAEF RMRL+GVEPNH+TF+TLLSACADFPS
Sbjct: 53 SVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPS 107
>ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = -3
Query: 166 SIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFPS 2
S+D V WTSS+AR CRNG LS+AAAEF RMRL+GVEPNH+TF+TLLSACADFPS
Sbjct: 53 SVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPS 107
>ref|XP_007015694.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao] gi|508786057|gb|EOY33313.1| Tetratricopeptide
repeat (TPR)-like superfamily protein [Theobroma cacao]
Length = 509
Score = 89.7 bits (221), Expect = 4e-16
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = -3
Query: 163 IDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFP 5
+DH VSWTSSI+R CR G +S+AA+EF RMRLS VEPNH+TFVTLLS CADFP
Sbjct: 42 LDHIVSWTSSISRHCRAGQISEAASEFTRMRLSEVEPNHITFVTLLSGCADFP 94
>ref|XP_006481538.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Citrus sinensis]
Length = 509
Score = 86.7 bits (213), Expect = 3e-15
Identities = 38/66 (57%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Frame = -3
Query: 196 QLSVRSNDDQS-IDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSA 20
Q+S+++N+ +S ++ TV WTSSI+R CR+G +++AA EF RM L G PNH+TF+TLLS
Sbjct: 30 QISIQTNNSKSTVNPTVQWTSSISRHCRSGRIAEAALEFTRMTLHGTNPNHITFITLLSG 89
Query: 19 CADFPS 2
CADFPS
Sbjct: 90 CADFPS 95
>ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = -3
Query: 184 RSNDDQSIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFP 5
RS+ ID VSWTSSIA CRNG L +AAAEF RM+++GV PNH+TF+TLLSAC DFP
Sbjct: 44 RSHTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFP 103
>emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = -3
Query: 184 RSNDDQSIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFP 5
RS+ ID VSWTSSIA CRNG L +AAAEF RM+++GV PNH+TF+TLLSAC DFP
Sbjct: 44 RSHTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFP 103
>gb|EXC37761.1| hypothetical protein L484_001219 [Morus notabilis]
Length = 508
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/51 (78%), Positives = 43/51 (84%)
Frame = -3
Query: 163 IDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACAD 11
I+ V WTSSIAR C+NG S+AAAEF RMRLSGVEPNHVTFVTLLS CAD
Sbjct: 47 IEPVVKWTSSIARHCKNGRFSEAAAEFSRMRLSGVEPNHVTFVTLLSGCAD 97
>ref|XP_004293118.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 504
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/68 (57%), Positives = 53/68 (77%)
Frame = -3
Query: 205 NKTQLSVRSNDDQSIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLL 26
NK + ++S +Q ID TV WTSSI++RCRNG L+ A ++F++MR + VEPNH+TFVTLL
Sbjct: 29 NKHSVLLKSRKEQ-IDQTVLWTSSISQRCRNGQLAQAVSQFIQMRRARVEPNHITFVTLL 87
Query: 25 SACADFPS 2
S CA FP+
Sbjct: 88 SGCAHFPA 95
>ref|XP_004251424.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Solanum lycopersicum]
Length = 507
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/60 (68%), Positives = 45/60 (75%)
Frame = -3
Query: 184 RSNDDQSIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFP 5
RSN+D T SWTS IAR C+NG L +A AEF RMR SGVEPNH+TFVTLLS CA FP
Sbjct: 38 RSNNDS----TASWTSLIARHCKNGRLIEAVAEFTRMRNSGVEPNHITFVTLLSCCAHFP 93
>gb|EYU20651.1| hypothetical protein MIMGU_mgv1a0263782mg, partial [Mimulus
guttatus]
Length = 139
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/51 (74%), Positives = 41/51 (80%)
Frame = -3
Query: 154 TVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFPS 2
T SWTSSIA CRNG LS+A +F RMR SGVEPNH+TFVTL SACA FPS
Sbjct: 61 TASWTSSIAHHCRNGRLSEAVLQFTRMRDSGVEPNHITFVTLFSACAHFPS 111
>ref|XP_006340426.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Solanum tuberosum]
Length = 509
Score = 82.4 bits (202), Expect = 6e-14
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = -3
Query: 184 RSNDDQSIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFP 5
RSN+D T SWTS IAR C+NG L +A +EF RMR SGVEPNH+TFVTLLS CA FP
Sbjct: 40 RSNNDS----TASWTSLIARHCKNGRLIEAVSEFTRMRNSGVEPNHITFVTLLSGCAHFP 95
Query: 4 S 2
+
Sbjct: 96 A 96
>ref|XP_002523876.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536964|gb|EEF38602.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 384
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/68 (51%), Positives = 51/68 (75%)
Frame = -3
Query: 208 VNKTQLSVRSNDDQSIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTL 29
+ + +++ ++SID T++WTSSI+R C NG L +AA+ F +MRL+ VEPNH+TF TL
Sbjct: 41 IQHPRTNLKHQCNRSIDLTIAWTSSISRHCCNGQLPEAASLFTQMRLAAVEPNHITFATL 100
Query: 28 LSACADFP 5
+S CADFP
Sbjct: 101 ISFCADFP 108
>ref|XP_006417992.1| hypothetical protein EUTSA_v10009524mg [Eutrema salsugineum]
gi|557095763|gb|ESQ36345.1| hypothetical protein
EUTSA_v10009524mg [Eutrema salsugineum]
Length = 500
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = -3
Query: 205 NKTQLSVRSNDDQSIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLL 26
N+ ++ + + + TVSWTS I RNG L+DAA EF MRL+GVEPNH+TF+ LL
Sbjct: 25 NQANPKIQKLNQSTSETTVSWTSRITLLSRNGRLADAAKEFSDMRLAGVEPNHITFIALL 84
Query: 25 SACADFPS 2
S C DFPS
Sbjct: 85 SGCGDFPS 92
>ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata
subsp. lyrata]
Length = 500
Score = 74.3 bits (181), Expect = 2e-11
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = -3
Query: 160 DHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFPS 2
++TVSWTS I RNG L++AA EF MRL+GVEPNH+TF+ +LS C DFPS
Sbjct: 34 ENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPS 86
>gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = -3
Query: 154 TVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFPS 2
TVSWTS I RNG L++AA F MRLSGVEPNH+TF+ LLS C DFPS
Sbjct: 27 TVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPS 77
>ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/70 (50%), Positives = 49/70 (70%), Gaps = 7/70 (10%)
Frame = -3
Query: 190 SVRSNDDQSIDHT-------VSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVT 32
+ +N S+ HT VSWT+SIA C++G L AA++FV+MR + +EPNH+TF+T
Sbjct: 37 NTNTNQGLSLRHTTKYNDPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFIT 96
Query: 31 LLSACADFPS 2
LLSACA +PS
Sbjct: 97 LLSACAHYPS 106
>ref|XP_007150033.1| hypothetical protein PHAVU_005G120400g [Phaseolus vulgaris]
gi|561023297|gb|ESW22027.1| hypothetical protein
PHAVU_005G120400g [Phaseolus vulgaris]
Length = 514
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/64 (54%), Positives = 46/64 (71%)
Frame = -3
Query: 193 LSVRSNDDQSIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACA 14
LS++S + D V+WTSSIA+ C+ G L AA+EFVRMR + +EPNH+T +TLLS CA
Sbjct: 37 LSLKSTTKYT-DPVVAWTSSIAQYCKGGHLVKAASEFVRMREANIEPNHITLITLLSVCA 95
Query: 13 DFPS 2
PS
Sbjct: 96 HHPS 99
>ref|XP_004487456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cicer arietinum]
Length = 512
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = -3
Query: 148 SWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFPS 2
SWT++I+ CRNG L +AA+EF RMR SG+EPN++T +TLLSACA PS
Sbjct: 49 SWTATISHHCRNGHLHEAASEFTRMRESGIEPNNITLITLLSACAHQPS 97
>ref|XP_006303598.1| hypothetical protein CARUB_v10011161mg [Capsella rubella]
gi|482572309|gb|EOA36496.1| hypothetical protein
CARUB_v10011161mg [Capsella rubella]
Length = 506
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = -3
Query: 172 DQSIDHT-VSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLLSACADFPS 2
+QS T VSWTS I RNG L++AA EF MRL+GVEPNH+TF+ LLS C DF S
Sbjct: 35 NQSTSETIVSWTSRITLLTRNGRLAEAAKEFSNMRLAGVEPNHITFIALLSGCGDFSS 92
>ref|NP_172066.3| pentatricopeptide repeat protein PDE247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity
to a hypothetical protein from Arabidopsis thaliana
gb|AC007109.6, and contains two DUF17 PF|01535 domains
[Arabidopsis thaliana] gi|62320576|dbj|BAD95203.1|
hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| pentatricopeptide repeat
protein PDE247 [Arabidopsis thaliana]
Length = 500
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = -3
Query: 205 NKTQLSVRSNDDQSIDHTVSWTSSIARRCRNGMLSDAAAEFVRMRLSGVEPNHVTFVTLL 26
N ++ ++ + + TVSWTS I RNG L++AA EF M L+GVEPNH+TF+ LL
Sbjct: 19 NHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALL 78
Query: 25 SACADFPS 2
S C DF S
Sbjct: 79 SGCGDFTS 86