BLASTX nr result

ID: Akebia23_contig00042802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00042802
         (278 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN...    49   3e-06
gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]             48   3e-06
emb|CCH50976.1| T4.15 [Malus x robusta]                                47   5e-06
gb|ABN09815.1| hypothetical protein MtrDRAFT_AC167711g37v2 [Medi...    47   5e-06

>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
           putative [Medicago truncatula]
          Length = 195

 Score = 48.5 bits (114), Expect(2) = 3e-06
 Identities = 22/41 (53%), Positives = 28/41 (68%)
 Frame = +1

Query: 19  WRGAS*VLMD*HIPIKLKEIFYKMAIRTAIFYGDESWEIKN 141
           WR AS VL D  +P+KLK  FY+ AIR A+ YG E W +K+
Sbjct: 109 WRRASGVLCDKKVPLKLKGKFYRTAIRPALLYGTECWAVKS 149



 Score = 28.1 bits (61), Expect(2) = 3e-06
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 135 QEQHVHSLDVAKKNLLR*MSQKTKNDIIINDYSHE 239
           + QH + + V +  +LR MS KT+ D I ND   E
Sbjct: 148 KSQHENQVSVTEMRMLRWMSGKTRQDRIRNDTIRE 182


>gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]
          Length = 137

 Score = 48.1 bits (113), Expect(2) = 3e-06
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = +1

Query: 19  WRGAS*VLMD*HIPIKLKEIFYKMAIRTAIFYGDESWEIKN 141
           WR AS VL D  +P+KLK  FY+ A+R A+ YG E W +K+
Sbjct: 37  WRRASGVLCDKKVPLKLKGKFYRTAVRPALLYGTECWAVKS 77



 Score = 28.5 bits (62), Expect(2) = 3e-06
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 135 QEQHVHSLDVAKKNLLR*MSQKTKNDIIINDYSHE 239
           + QH + + V +  +LR MS KT++D I ND   E
Sbjct: 76  KSQHENQVSVVEMRMLRWMSGKTRHDRIRNDTIRE 110


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 47.4 bits (111), Expect(2) = 5e-06
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = +1

Query: 19  WRGAS*VLMD*HIPIKLKEIFYKMAIRTAIFYGDESWEIKN 141
           W+ AS VL D  +P+KLK  FY+ AIR A+ YG E W +K+
Sbjct: 825 WKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKH 865



 Score = 28.5 bits (62), Expect(2) = 5e-06
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 135 QEQHVHSLDVAKKNLLR*MSQKTKNDIIIND 227
           + QHVH + VA+  +LR M   T+ D I N+
Sbjct: 864 KHQHVHKMGVAEMRMLRWMCGHTRKDKIRNE 894


>gb|ABN09815.1| hypothetical protein MtrDRAFT_AC167711g37v2 [Medicago truncatula]
          Length = 104

 Score = 46.6 bits (109), Expect(2) = 5e-06
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = +1

Query: 19  WRGAS*VLMD*HIPIKLKEIFYKMAIRTAIFYGDESWEIKN 141
           WR AS VL D  +P+KLK  FY+  +R A+ YG E W +K+
Sbjct: 18  WRRASSVLCDKKVPLKLKGKFYRTTVRPALLYGTECWAVKS 58



 Score = 29.3 bits (64), Expect(2) = 5e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 135 QEQHVHSLDVAKKNLLR*MSQKTKNDIIINDYSHE 239
           + QH + + VA+  +LR MS KT+ D I ND   E
Sbjct: 57  KSQHENQISVAEMMMLRWMSGKTRQDRIRNDTIRE 91


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