BLASTX nr result
ID: Akebia23_contig00042403
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia23_contig00042403
(410 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADD31217.1| RNA polymerase alpha subunit protein [Meliosma af... 133 3e-29
ref|YP_001294216.1| RNA polymerase alpha subunit [Buxus microphy... 131 9e-29
gb|AEX58487.1| RNA polymerase alpha subunit (chloroplast) [Theob... 130 2e-28
ref|YP_004021348.1| RNA polymerase alpha subunit [Theobroma caca... 130 2e-28
ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis ... 130 2e-28
ref|YP_008993724.1| RNA polymerase alpha subunit (chloroplast) [... 129 6e-28
ref|YP_008993638.1| RNA polymerase alpha subunit (chloroplast) [... 129 6e-28
ref|YP_008993466.1| RNA polymerase alpha subunit (chloroplast) [... 129 6e-28
ref|YP_005097906.1| RNA polymerase alpha subunit (chloroplast) [... 127 1e-27
ref|NP_862785.1| RNA polymerase alpha subunit [Calycanthus flori... 127 2e-27
gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus] 126 3e-27
ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus mac... 126 3e-27
gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sa... 126 4e-27
gb|ADD31228.1| RNA polymerase alpha subunit protein [Gunnera man... 126 4e-27
ref|YP_008993896.1| RNA polymerase alpha subunit (chloroplast) [... 125 5e-27
ref|YP_008993810.1| RNA polymerase alpha subunit (chloroplast) [... 125 5e-27
ref|YP_008993380.1| RNA polymerase alpha subunit (chloroplast) [... 125 5e-27
ref|YP_008993208.1| RNA polymerase alpha subunit (chloroplast) [... 125 5e-27
ref|YP_007474568.1| RNA polymerase alpha subunit (chloroplast) [... 125 5e-27
ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [... 125 5e-27
>gb|ADD31217.1| RNA polymerase alpha subunit protein [Meliosma aff. cuneifolia
Moore 333]
Length = 337
Score = 133 bits (334), Expect = 3e-29
Identities = 65/74 (87%), Positives = 69/74 (93%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLAKLRKNKKEIA+K IFIDQSELP +TYNCLKRSNIHTLLDLLNKSQE+LM+IE
Sbjct: 251 FTFHDRLAKLRKNKKEIALKFIFIDQSELPPRTYNCLKRSNIHTLLDLLNKSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV ILGIL
Sbjct: 311 HFRIEDVKHILGIL 324
>ref|YP_001294216.1| RNA polymerase alpha subunit [Buxus microphylla]
gi|172048681|sp|A6MM68.1|RPOA_BUXMI RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
gi|146762316|gb|ABQ45280.1| RNA polymerase alpha subunit
[Buxus microphylla]
Length = 337
Score = 131 bits (330), Expect = 9e-29
Identities = 65/81 (80%), Positives = 72/81 (88%), Gaps = 3/81 (3%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLAK RKNKKEI+ +CIFIDQSELP +TYNCLKRSNIHTLLDLLN SQE+LMKIE
Sbjct: 251 FTFHDRLAKQRKNKKEISFQCIFIDQSELPPRTYNCLKRSNIHTLLDLLNNSQEDLMKIE 310
Query: 181 HFRIEDVNRILGIL---YALD 234
HFRIEDV +ILGIL +A+D
Sbjct: 311 HFRIEDVKQILGILQKHFAID 331
>gb|AEX58487.1| RNA polymerase alpha subunit (chloroplast) [Theobroma grandiflorum]
Length = 327
Score = 130 bits (326), Expect = 2e-28
Identities = 63/74 (85%), Positives = 68/74 (91%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
FPFHDRLAKLRK KKEIA+K IFIDQSELP + YNCLK+SNIHTLLDLLN SQE+LMKIE
Sbjct: 251 FPFHDRLAKLRKKKKEIALKYIFIDQSELPPRIYNCLKKSNIHTLLDLLNNSQEDLMKIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +ILGIL
Sbjct: 311 HFRIEDVKQILGIL 324
>ref|YP_004021348.1| RNA polymerase alpha subunit [Theobroma cacao]
gi|309321298|gb|ADO64841.1| RNA polymerase alpha subunit
[Theobroma cacao] gi|328924811|gb|ADO64922.2| RNA
polymerase alpha subunit [Theobroma cacao]
gi|371925968|gb|AEX57758.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926050|gb|AEX57839.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926132|gb|AEX57920.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926214|gb|AEX58001.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926296|gb|AEX58082.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926378|gb|AEX58163.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926460|gb|AEX58244.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926542|gb|AEX58325.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926624|gb|AEX58406.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
gi|371926788|gb|AEX58568.1| RNA polymerase alpha subunit
(chloroplast) [Theobroma cacao]
Length = 327
Score = 130 bits (326), Expect = 2e-28
Identities = 63/74 (85%), Positives = 68/74 (91%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
FPFHDRLAKLRK KKEIA+K IFIDQSELP + YNCLK+SNIHTLLDLLN SQE+LMKIE
Sbjct: 251 FPFHDRLAKLRKKKKEIALKYIFIDQSELPPRIYNCLKKSNIHTLLDLLNNSQEDLMKIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +ILGIL
Sbjct: 311 HFRIEDVKQILGIL 324
>ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis saniculifolia]
gi|226933914|gb|ACO92047.1| RNA polymerase alpha subunit
[Megaleranthis saniculifolia]
Length = 328
Score = 130 bits (326), Expect = 2e-28
Identities = 62/74 (83%), Positives = 68/74 (91%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHD L K+RKNKKEI +KCIFIDQSELPS+TYNCLKR NIHTLLDLLNKSQE+LMK+E
Sbjct: 251 FTFHDGLDKVRKNKKEIELKCIFIDQSELPSRTYNCLKRFNIHTLLDLLNKSQEDLMKME 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV RILGI+
Sbjct: 311 HFRIEDVRRILGII 324
>ref|YP_008993724.1| RNA polymerase alpha subunit (chloroplast) [Magnolia salicifolia]
Length = 337
Score = 129 bits (323), Expect = 6e-28
Identities = 61/74 (82%), Positives = 68/74 (91%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
FPFHDRLA +RKNKK IA+KCIFIDQSELP +TYNCLKRSNIHTLLDLL+ SQE+LM+IE
Sbjct: 251 FPFHDRLANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL IL
Sbjct: 311 HFRIEDVKQILDIL 324
>ref|YP_008993638.1| RNA polymerase alpha subunit (chloroplast) [Magnolia odora]
Length = 337
Score = 129 bits (323), Expect = 6e-28
Identities = 61/74 (82%), Positives = 68/74 (91%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
FPFHDRLA +RKNKK IA+KCIFIDQSELP +TYNCLKRSNIHTLLDLL+ SQE+LM+IE
Sbjct: 251 FPFHDRLANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL IL
Sbjct: 311 HFRIEDVKQILDIL 324
>ref|YP_008993466.1| RNA polymerase alpha subunit (chloroplast) [Magnolia kobus]
Length = 337
Score = 129 bits (323), Expect = 6e-28
Identities = 61/74 (82%), Positives = 68/74 (91%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
FPFHDRLA +RKNKK IA+KCIFIDQSELP +TYNCLKRSNIHTLLDLL+ SQE+LM+IE
Sbjct: 251 FPFHDRLANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL IL
Sbjct: 311 HFRIEDVKQILDIL 324
>ref|YP_005097906.1| RNA polymerase alpha subunit (chloroplast) [Colocasia esculenta]
gi|340536672|gb|AEK48439.1| RNA polymerase alpha subunit
(chloroplast) [Colocasia esculenta]
gi|340536759|gb|AEK48525.1| RNA polymerase alpha subunit
(chloroplast) [Colocasia esculenta]
Length = 339
Score = 127 bits (320), Expect = 1e-27
Identities = 61/74 (82%), Positives = 69/74 (93%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLA L+KNKKEIA+KCIFIDQSELPS+TYNCLKRSNIHTLLDLL+ SQE+LMKIE
Sbjct: 251 FTFHDRLANLKKNKKEIALKCIFIDQSELPSRTYNCLKRSNIHTLLDLLSNSQEDLMKIE 310
Query: 181 HFRIEDVNRILGIL 222
+FRIEDV +I+ IL
Sbjct: 311 YFRIEDVKQIVDIL 324
>ref|NP_862785.1| RNA polymerase alpha subunit [Calycanthus floridus var. glaucus]
gi|41688654|sp|Q7YJU6.1|RPOA_CALFG RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
gi|32399410|emb|CAD28752.1| RNA polymerase alpha subunit
[Calycanthus floridus var. glaucus]
Length = 340
Score = 127 bits (318), Expect = 2e-27
Identities = 59/74 (79%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F HDRL +RKNKKEIA+KCIFIDQSELP++TYNCLKRSNIHTLLDLLN SQE+LM+IE
Sbjct: 253 FTLHDRLGNIRKNKKEIALKCIFIDQSELPTRTYNCLKRSNIHTLLDLLNNSQEDLMRIE 312
Query: 181 HFRIEDVNRILGIL 222
HFRIED+ +IL IL
Sbjct: 313 HFRIEDIKQILDIL 326
>gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus]
Length = 339
Score = 126 bits (317), Expect = 3e-27
Identities = 60/74 (81%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHD KL+KNKKEI +KCIFIDQSELPS+TYNCLKR+NIHTLLDLLNKSQE+LMKIE
Sbjct: 252 FTFHDGFDKLKKNKKEIELKCIFIDQSELPSRTYNCLKRANIHTLLDLLNKSQEDLMKIE 311
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL I+
Sbjct: 312 HFRIEDVKQILDII 325
>ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus macranthus]
gi|158514028|sp|A1XGS0.1|RPOA_RANMC RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
gi|85540836|gb|ABC70788.1| RNA polymerase alpha subunit
[Ranunculus macranthus]
Length = 346
Score = 126 bits (317), Expect = 3e-27
Identities = 60/74 (81%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHD KL+KNKKEI +KCIFIDQSELPS+TYNCLKR+NIHTLLDLLNKSQE+LMKIE
Sbjct: 252 FTFHDGFDKLKKNKKEIELKCIFIDQSELPSRTYNCLKRANIHTLLDLLNKSQEDLMKIE 311
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL I+
Sbjct: 312 HFRIEDVKQILDII 325
>gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sanguinea]
Length = 337
Score = 126 bits (316), Expect = 4e-27
Identities = 62/74 (83%), Positives = 65/74 (87%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLAKLRKNKKEIA+K IFIDQSELP + Y CLKRSNIHTLLDLLN SQE+LMKIE
Sbjct: 251 FTFHDRLAKLRKNKKEIALKYIFIDQSELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV ILG L
Sbjct: 311 HFRIEDVKEILGFL 324
>gb|ADD31228.1| RNA polymerase alpha subunit protein [Gunnera manicata]
Length = 330
Score = 126 bits (316), Expect = 4e-27
Identities = 62/74 (83%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLAKLRKNKKEIA+K IFIDQSELPS+TYNCLK SNIHTLLDLLN SQE+LMKI+
Sbjct: 251 FTFHDRLAKLRKNKKEIALKSIFIDQSELPSRTYNCLKSSNIHTLLDLLNNSQEDLMKIK 310
Query: 181 HFRIEDVNRILGIL 222
HF IEDV +IL IL
Sbjct: 311 HFSIEDVKQILDIL 324
>ref|YP_008993896.1| RNA polymerase alpha subunit (chloroplast) [Magnolia sprengeri]
Length = 337
Score = 125 bits (315), Expect = 5e-27
Identities = 60/74 (81%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLA +RKNKK IA+KCIFIDQSELP +TYNCLKRSNIHTLLDLL+ SQE+LM+IE
Sbjct: 251 FTFHDRLANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL IL
Sbjct: 311 HFRIEDVKQILDIL 324
>ref|YP_008993810.1| RNA polymerase alpha subunit (chloroplast) [Magnolia sinica]
Length = 337
Score = 125 bits (315), Expect = 5e-27
Identities = 60/74 (81%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLA +RKNKK IA+KCIFIDQSELP +TYNCLKRSNIHTLLDLL+ SQE+LM+IE
Sbjct: 251 FTFHDRLANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL IL
Sbjct: 311 HFRIEDVKQILDIL 324
>ref|YP_008993380.1| RNA polymerase alpha subunit (chloroplast) [Magnolia pyramidata]
Length = 337
Score = 125 bits (315), Expect = 5e-27
Identities = 60/74 (81%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLA +RKNKK IA+KCIFIDQSELP +TYNCLKRSNIHTLLDLL+ SQE+LM+IE
Sbjct: 251 FTFHDRLANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL IL
Sbjct: 311 HFRIEDVKQILDIL 324
>ref|YP_008993208.1| RNA polymerase alpha subunit (chloroplast) [Magnolia cathcartii]
Length = 337
Score = 125 bits (315), Expect = 5e-27
Identities = 60/74 (81%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLA +RKNKK IA+KCIFIDQSELP +TYNCLKRSNIHTLLDLL+ SQE+LM+IE
Sbjct: 251 FTFHDRLANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL IL
Sbjct: 311 HFRIEDVKQILDIL 324
>ref|YP_007474568.1| RNA polymerase alpha subunit (chloroplast) [Magnolia grandiflora]
gi|372862875|gb|AEX98951.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia grandiflora]
gi|372863045|gb|AEX99119.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia grandiflora]
Length = 337
Score = 125 bits (315), Expect = 5e-27
Identities = 60/74 (81%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLA +RKNKK IA+KCIFIDQSELP +TYNCLKRSNIHTLLDLL+ SQE+LM+IE
Sbjct: 251 FTFHDRLANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL IL
Sbjct: 311 HFRIEDVKQILDIL 324
>ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [Magnolia officinalis]
gi|452848803|ref|YP_007474484.1| RNA polymerase alpha
subunit (chloroplast) [Magnolia officinalis subsp.
biloba] gi|619275767|ref|YP_009026913.1| RNA polymerase
alpha subunit [Magnolia tripetala]
gi|372862453|gb|AEX98534.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis]
gi|372862536|gb|AEX98616.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862621|gb|AEX98700.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862706|gb|AEX98784.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|608608435|gb|AHW51989.1| RNA polymerase alpha subunit
[Magnolia tripetala]
Length = 337
Score = 125 bits (315), Expect = 5e-27
Identities = 60/74 (81%), Positives = 67/74 (90%)
Frame = +1
Query: 1 FPFHDRLAKLRKNKKEIAMKCIFIDQSELPSKTYNCLKRSNIHTLLDLLNKSQEELMKIE 180
F FHDRLA +RKNKK IA+KCIFIDQSELP +TYNCLKRSNIHTLLDLL+ SQE+LM+IE
Sbjct: 251 FTFHDRLANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIE 310
Query: 181 HFRIEDVNRILGIL 222
HFRIEDV +IL IL
Sbjct: 311 HFRIEDVKQILDIL 324