BLASTX nr result

ID: Akebia23_contig00040842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00040842
         (214 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF89648.1|AF168599_1 P0 protein [Beet mild yellowing virus]        56   5e-06

>gb|AAF89648.1|AF168599_1 P0 protein [Beet mild yellowing virus]
          Length = 239

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 27/67 (40%), Positives = 38/67 (56%)
 Frame = +2

Query: 14  SVDIRRPQADNVARSLLQRSWSSNFGERLSRHHEPFTYGERHFLALLHVWGGQSSENRKS 193
           ++D+R P   +V R  L R+   N GERL RH E F++GE  F   L VW  +S    + 
Sbjct: 94  NIDLRVPPRKDVKRFYLARNSGRNLGERLQRHREIFSHGEAEFKKFLSVWCAESERKLRE 153

Query: 194 YPRIHIK 214
            P+I+IK
Sbjct: 154 SPKINIK 160


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