BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00040841
         (516 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th...   199   3e-49
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]       186   2e-45
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      186   2e-45
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      182   5e-44
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis...   181   7e-44
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   181   1e-43
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   180   2e-43
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...   180   2e-43
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [...   180   2e-43
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps...   172   3e-41
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   172   4e-41
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   172   4e-41
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   171   7e-41
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   171   7e-41
ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   168   6e-40
ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis ...   166   3e-39
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus...   165   5e-39
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   165   5e-39
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A...   162   4e-38
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]       157   1e-36

>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
           polymerase 1 isoform 1 [Theobroma cacao]
           gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709488|gb|EOY01385.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
           gi|508709489|gb|EOY01386.1| RNA-dependent RNA polymerase
           1 isoform 1 [Theobroma cacao]
          Length = 1109

 Score =  199 bits (507), Expect = 3e-49
 Identities = 100/171 (58%), Positives = 128/171 (74%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQVS FPS+V AE VK FLE YTG+ TVYALK+RQ K   +  R++A+VQFT    AE I
Sbjct: 5   IQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQK---NGGRAYAIVQFTKSTDAELI 61

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
             L NQRLYYG+SYLK  EM+ DIVPKPRT + ++E   LHFGCQ+S EKF  LW+ +D 
Sbjct: 62  IRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEVDV 121

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            +N G G+RKL+FLL+H  +EY+LDL Y++IWQI+L  PR  ++K+LLIQ+
Sbjct: 122 TVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQL 172


>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
          Length = 1133

 Score =  186 bits (473), Expect = 2e-45
 Identities = 96/171 (56%), Positives = 125/171 (73%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQ+SGFPS VSAE+VK FLE +TG GTVYA+K+R TK   S  RS+A+VQF + E+AE I
Sbjct: 5   IQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGS--RSYAIVQFMTVETAELI 62

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
             L N RL+YG SYL    M+RDIVPKPR  + SL+   LHFGCQIS+EKFS LW+  + 
Sbjct: 63  IRLANPRLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWRVGNV 122

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            ++ G GLR+L F LT+  +EY+L L Y+++WQI+L  PR  + K+LLIQ+
Sbjct: 123 SVDFGLGLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLIQL 173


>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  186 bits (473), Expect = 2e-45
 Identities = 98/171 (57%), Positives = 121/171 (70%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GF S VSA  VK FLE YTG  TVYALK+RQ K    + R+FA+VQFT    A  I
Sbjct: 5   IQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDAGLI 61

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
             L NQRLYYG SYLK  EM+ DIVPKPR  + ++E   ++FGCQ+SEEKF  LWK  + 
Sbjct: 62  IRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVLWKADNV 121

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            LN G G+RKLEFLL++C  +YKL+L Y++IWQI+LR P   ++K LLIQ+
Sbjct: 122 TLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQL 172


>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  182 bits (461), Expect = 5e-44
 Identities = 96/171 (56%), Positives = 119/171 (69%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GF S VSA  VK FLE YTG  TVYALK+RQ K    + R+FA+VQFT    A  I
Sbjct: 5   IQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHK---KSGRAFAIVQFTRSSDAGLI 61

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
             L NQRLYYG SYLK  EM+ DIVPKPR  + ++E   ++F C +SEEKF  LWK  + 
Sbjct: 62  IRLANQRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFDCHVSEEKFYVLWKADNV 121

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            LN G G+RKLEFLL++C  +YKL+L Y++IWQI+LR P   ++K LLIQ+
Sbjct: 122 TLNFGTGMRKLEFLLSYCSSKYKLELFYENIWQIELRCPHSQTSKHLLIQL 172


>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
           1a [Cucumis sativus]
          Length = 1130

 Score =  181 bits (460), Expect = 7e-44
 Identities = 96/172 (55%), Positives = 121/172 (70%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           I +SGFPS V+A+ VK FLE +TG GTVYA+K+R  K  R   R +A+VQFTS   AE I
Sbjct: 5   IHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPK--RGGGRLYAIVQFTSATQAELI 62

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
            SL NQRL+YG+SYLK    + DIVPKPRT M +LE   L FGCQ+S EKF  LW+G   
Sbjct: 63  ISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGNVD 122

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQVS 1
           ++  G G+RK+ F L +  +EY+L+LSY+ IWQIQL  PR  S K+LLIQ+S
Sbjct: 123 LVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLS 174


>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
           max] gi|571439308|ref|XP_006574822.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
           max] gi|571439310|ref|XP_006574823.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
           max]
          Length = 1125

 Score =  181 bits (458), Expect = 1e-43
 Identities = 91/174 (52%), Positives = 126/174 (72%), Gaps = 3/174 (1%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           I++ GFP+SV+   VK F+E YTGEGTV+A+KLR  K     PR+FA++QFT+  SA  +
Sbjct: 5   IELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRV--PRAFAIIQFTTANSATSM 62

Query: 336 SSLIN---QRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKG 166
            S  N   + L YGTSYLK  EM+RDIVP+PR  + SL+   L FGCQIS+ +FS LWK 
Sbjct: 63  MSRANNILRTLRYGTSYLKAREMERDIVPRPRVFLHSLDDVKLSFGCQISKGRFSVLWKK 122

Query: 165 LDAILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            D I+N G G+RK+ FL +H +++YKL+LSY++IW+I+L  PR  +T++LLIQ+
Sbjct: 123 QDVIVNFGSGMRKMHFLFSHNNVQYKLELSYENIWKIELHRPRNETTRYLLIQL 176


>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
          Length = 1132

 Score =  180 bits (457), Expect = 2e-43
 Identities = 92/173 (53%), Positives = 126/173 (72%), Gaps = 2/173 (1%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFP+ V+AE VK FLE+ TG GTVYALKLR  K  +   R +A+VQFT+ E+A+ I
Sbjct: 5   IQVFGFPAGVTAEAVKDFLESKTGGGTVYALKLRTPK--KGVGRLYAIVQFTTKEAADTI 62

Query: 336 SSLI--NQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGL 163
            SL    ++L+YG SYL    M++D VP+PRT M ++E   LHFGC+IS EKF+ LW+G+
Sbjct: 63  ISLACRTEKLWYGRSYLNARRMEQDTVPRPRTFMHTMEHIELHFGCKISNEKFAVLWRGV 122

Query: 162 DAILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
           +  +N GFG+RK+ FLL+H   EY+L+L Y++IW+I+L  PR   TK+LLIQ+
Sbjct: 123 NVTVNFGFGMRKINFLLSHLGEEYRLELDYENIWEIELHCPRWQMTKYLLIQL 175


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score =  180 bits (457), Expect = 2e-43
 Identities = 92/171 (53%), Positives = 123/171 (71%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFPS VSA+ +K FLE YTGEGT+ AL+++Q ++  S   + A VQFTS E AE I
Sbjct: 5   IQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGAS--MTHAKVQFTSFELAEFI 62

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
            +L  ++++YG +YLK  EM  DI+PKPR  + S++   LHFGCQ+S+E+F  LWK ++ 
Sbjct: 63  ITLCKKKVWYGRNYLKAREMDLDIIPKPRAFLHSMDRITLHFGCQMSDERFCVLWKAINV 122

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            +  G GLRK  F L+H   EYKL+LSY++IWQIQL+HPR   TKFLLIQ+
Sbjct: 123 SVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQL 173


>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
           gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
           family protein [Populus trichocarpa]
          Length = 1133

 Score =  180 bits (456), Expect = 2e-43
 Identities = 89/171 (52%), Positives = 124/171 (72%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           ++VSGFPSS +A  V+VFLE++TG GTV ALK+R+ +T     R +A+VQFT+  +AEQI
Sbjct: 5   VKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRT--GGARKYAIVQFTTTRAAEQI 62

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
            SL N RL+YG SYL    M RDI+P+PR+ + ++E   LHFG Q S+EKFS++W G + 
Sbjct: 63  ISLANPRLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSGNNV 122

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            +N G G+RKL F L+H   EYKL+L +++IWQI+L  PR  + K+LLIQ+
Sbjct: 123 SVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQL 173


>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
           gi|482575337|gb|EOA39524.1| hypothetical protein
           CARUB_v10008144mg [Capsella rubella]
          Length = 1107

 Score =  172 bits (437), Expect = 3e-41
 Identities = 86/171 (50%), Positives = 118/171 (69%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFP  V+ + VK+FLE  TG GTVYA+K+RQ K  R  PR FA+VQFTS   A  I
Sbjct: 5   IQVFGFPVGVNTDDVKIFLERLTGSGTVYAIKVRQPK--RGGPRVFAIVQFTSERHARLI 62

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
            ++  +RLYYG SYLK  EM++DIVPKPR  + S+    ++FGCQ+S +K  +LW   + 
Sbjct: 63  ITMAAERLYYGRSYLKAFEMEQDIVPKPRASLHSISNLKMYFGCQVSPKKLLTLWSAHNV 122

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            ++ G G+RKL F ++    +Y+L+LSY++IWQI L  P+  S+KFL+IQV
Sbjct: 123 CVSFGTGMRKLHFSMSWYQKDYRLELSYENIWQIDLHSPQGGSSKFLVIQV 173


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  172 bits (436), Expect = 4e-41
 Identities = 86/171 (50%), Positives = 116/171 (67%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFP+ VSAE VK FLE  TG GTVYA+K+RQ K  +  PR +A+VQFTS      I
Sbjct: 5   IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVYAIVQFTSERHTRLI 62

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
            +   +RLYYG SYLK  E+++DIVPKPR  + ++    + FGCQ+S +KF +LW   D 
Sbjct: 63  ITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQDV 122

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            ++ G G+RKL F  +    +Y+L+LSY++IWQI L  P+  S+KFL+IQV
Sbjct: 123 CVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQV 173


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  172 bits (436), Expect = 4e-41
 Identities = 86/171 (50%), Positives = 116/171 (67%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFP+ VSAE VK FLE  TG GTVYA+K+RQ K  +  PR +A+VQFTS      I
Sbjct: 5   IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVYAIVQFTSERHTRLI 62

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
            +   +RLYYG SYLK  E+++DIVPKPR  + ++    + FGCQ+S +KF +LW   D 
Sbjct: 63  ITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQDV 122

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            ++ G G+RKL F  +    +Y+L+LSY++IWQI L  P+  S+KFL+IQV
Sbjct: 123 CVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQV 173


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  171 bits (434), Expect = 7e-41
 Identities = 87/172 (50%), Positives = 117/172 (68%), Gaps = 1/172 (0%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFP+ VSAE VK FLE  TG GTVYA+K+RQ K  +  PR FA+VQFT+   A QI
Sbjct: 5   IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVFAIVQFTNERYARQI 62

Query: 336 -SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLD 160
            +    +RLYYG SYL   E+ +DIVPKPR  + ++    ++FGCQ+S +KF +LW   D
Sbjct: 63  ITGAAERRLYYGRSYLNAFEVDQDIVPKPRASLHNISGLKMYFGCQVSTQKFLTLWSAQD 122

Query: 159 AILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
             ++ G G+RKL F  +    +Y+L+LSY++IWQI L  P+  S+KFL+IQV
Sbjct: 123 VCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQV 174


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score =  171 bits (434), Expect = 7e-41
 Identities = 94/171 (54%), Positives = 119/171 (69%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV G PS+VSA  +K FLE YTGEGT+ AL+++Q K+  S   + A VQFTS   AE I
Sbjct: 5   IQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVS--MTHAKVQFTSLRLAELI 62

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
            SL  Q L+YG +YLK  EM  DI+PKPRT + S++   LHFG Q+S E+F  LWK ++ 
Sbjct: 63  ISLAKQ-LWYGGNYLKAREMDLDIIPKPRTFLHSMDRITLHFGYQMSNERFCVLWKAINV 121

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            +  GFGLRK  F L+H   EYKL+LS ++IWQIQLR PR  +TKFLLIQ+
Sbjct: 122 SVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQL 172


>ref|XP_002870481.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297316317|gb|EFH46740.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score =  168 bits (426), Expect = 6e-40
 Identities = 86/171 (50%), Positives = 117/171 (68%), Gaps = 1/171 (0%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFP+ VSAE VK FLE  TG GTVYA+K+RQ K  +  PR FA+VQFT+   A QI
Sbjct: 5   IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVFAIVQFTNERYARQI 62

Query: 336 SSLINQR-LYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLD 160
            +   +R LYYG SYL   E+++DIVPKPR  + ++    ++FGCQ+S +KF +LW   D
Sbjct: 63  ITGAAERSLYYGRSYLNAFEVEQDIVPKPRASLHNISGLKMYFGCQVSTQKFLTLWSAQD 122

Query: 159 AILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQ 7
             ++ G G+RKL F  +    +Y+L+LSY++IWQI L  P+  S+KFL+IQ
Sbjct: 123 VCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQ 173


>ref|XP_002892830.1| RNA-dependent RNA polymerase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297338672|gb|EFH69089.1| RNA-dependent RNA polymerase
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 1107

 Score =  166 bits (420), Expect = 3e-39
 Identities = 85/172 (49%), Positives = 116/172 (67%), Gaps = 1/172 (0%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFP+ VSAE VK FLE  TG GTVYA+K+RQ K  +  PR FA+VQFT+   A QI
Sbjct: 5   IQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPK--KGGPRVFAIVQFTNEIYARQI 62

Query: 336 -SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLD 160
            +    +RLYYG SYL   E+++DIVPKPR  + ++    ++FGCQ+S +   +LW   D
Sbjct: 63  ITGAAERRLYYGRSYLNAFEVEQDIVPKPRASLHNISGLKMYFGCQVSTQTLLTLWSAQD 122

Query: 159 AILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
             ++ G G+RKL F  +    +Y+L+LSY++IWQI L  P+  S+KFL+IQV
Sbjct: 123 VSVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQV 174


>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
          Length = 1110

 Score =  165 bits (418), Expect = 5e-39
 Identities = 90/171 (52%), Positives = 111/171 (64%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFP  V+AE VK FLENYTGEGTV AL+++  K  R   R++A VQFT+   AE I
Sbjct: 5   IQVFGFPYLVAAELVKKFLENYTGEGTVIALEVKTAKVGR---RAYARVQFTNIRCAETI 61

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
             L   RLYYGTSYLK  E   DIV  PRT    +E   L+FGCQIS  KFS LWKG   
Sbjct: 62  IDLAKNRLYYGTSYLKAYESDIDIVQNPRTFAHEMENVTLNFGCQISPHKFSVLWKGESV 121

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            +  G G++K+ F L H  +EYK+ LSY++IWQI L +    S+K L+IQ+
Sbjct: 122 TVKFGTGMKKMHFFLRHNSVEYKMQLSYENIWQIVLYNSYGQSSKLLVIQL 172


>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca
           subsp. vesca]
          Length = 1119

 Score =  165 bits (418), Expect = 5e-39
 Identities = 86/171 (50%), Positives = 115/171 (67%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQ+ GFPS  +AE +K FLE +TGEG+V+ALKLR  K   S  R +A++QF S   AE+I
Sbjct: 5   IQLHGFPSGQTAENIKEFLEKHTGEGSVFALKLRPAK---SGGRFYAIIQFQSISQAEKI 61

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
            SL N RL+YG SYL       DIVPKPRT + SL    LH GCQ++++KFS LW   + 
Sbjct: 62  ISLANARLWYGRSYLNA-RPAHDIVPKPRTFLHSLRDLVLHVGCQVAKDKFSVLWGTAEV 120

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            ++ GFG+R L+F L +    Y+L LSY++IWQI+L H R  S K+L+IQ+
Sbjct: 121 SVDFGFGMRNLQFRLLYRQKVYRLQLSYENIWQIELHHQRGRSAKYLVIQL 171


>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
           gi|548853371|gb|ERN11375.1| hypothetical protein
           AMTR_s00176p00039530 [Amborella trichopoda]
          Length = 1210

 Score =  162 bits (410), Expect = 4e-38
 Identities = 89/173 (51%), Positives = 115/173 (66%), Gaps = 2/173 (1%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           +QVSGFP    AE VK FLE+ TG GTVY LK+R  K+ + N R FA+VQFT+ +SAE I
Sbjct: 78  VQVSGFPQGTCAEAVKKFLESITGFGTVYHLKIRIHKS-KPNSRVFAIVQFTTSKSAEVI 136

Query: 336 SSLINQ--RLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGL 163
            SL  Q   LY+G SY+ V  M+ DIVP PR     LE   L+FG QISEE F+ LW   
Sbjct: 137 YSLAPQPKSLYFGNSYVIVRYMENDIVPNPRVTYHVLESIQLYFGNQISEESFAILWSNT 196

Query: 162 DAILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
           +  +  GFGL+K+ F L H  ++YKLDL Y++IWQIQLR P    T++L++Q+
Sbjct: 197 NVKVEFGFGLKKIFFYLAHTGVDYKLDLYYENIWQIQLRRPGTEGTRYLVLQM 249


>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
          Length = 1116

 Score =  157 bits (398), Expect = 1e-36
 Identities = 87/171 (50%), Positives = 118/171 (69%)
 Frame = -1

Query: 516 IQVSGFPSSVSAETVKVFLENYTGEGTVYALKLRQTKTTRSNPRSFAVVQFTSPESAEQI 337
           IQV GFP  +SAE VK FLEN+TG GTVYAL+++Q+K  R   R+FA VQF + +SAE I
Sbjct: 5   IQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGR---RAFAKVQFANNKSAEFI 61

Query: 336 SSLINQRLYYGTSYLKVLEMKRDIVPKPRTLMLSLEVKALHFGCQISEEKFSSLWKGLDA 157
             L ++ LYYG SYLK  EMK DIV +PRT +  ++   L+FGCQIS++KF+ L    D 
Sbjct: 62  IDLASKGLYYGPSYLKAWEMKTDIV-QPRTYVEHMDGVTLNFGCQISDKKFAVLGSK-DV 119

Query: 156 ILNVGFGLRKLEFLLTHCHMEYKLDLSYDSIWQIQLRHPRRLSTKFLLIQV 4
            +  G GL+K+ F L+H   +YKL LSY++IWQ+ L  P   + +FLL+Q+
Sbjct: 120 SIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQL 170