BLASTX nr result

ID: Akebia23_contig00040692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00040692
         (275 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    58   1e-06
ref|XP_006845494.1| hypothetical protein AMTR_s00019p00149380 [A...    57   3e-06

>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
 Frame = +2

Query: 2   STCPLCRGSLLPDFPTNSCRXXXXXXXXXXXXXXXXIVLDRD----PSSI--SGTQIGFH 163
           STCPLCRGSLLP+F +NS                  I+ DRD     SS+  + + +GFH
Sbjct: 170 STCPLCRGSLLPEFSSNSSCSPVVLVLESGSESSREIITDRDNIGRTSSVLTTNSYLGFH 229

Query: 164 GEDQFGSPCNDVSMKISEIPFMGSPISEE-------KVVQVKLG 274
           G+++ GS   ++S+K  EI       S         KVV VKLG
Sbjct: 230 GDNELGSSRIEISLKSGEILGKNESFSPRVAVDSGAKVVPVKLG 273


>ref|XP_006845494.1| hypothetical protein AMTR_s00019p00149380 [Amborella trichopoda]
           gi|548848066|gb|ERN07169.1| hypothetical protein
           AMTR_s00019p00149380 [Amborella trichopoda]
          Length = 494

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/98 (40%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
 Frame = +2

Query: 2   STCPLCRGSLLPDFPTNSCRXXXXXXXXXXXXXXXXIVLDRDPS--SISGTQIGFHGEDQ 175
           STCPLCRGSLLPDF   +C                 + L+R      I+ +Q+G  GED 
Sbjct: 150 STCPLCRGSLLPDFSAPNCSPVVLVLESGSESSREMVNLERGVGQVGINASQVGLSGEDG 209

Query: 176 FGSPCNDVSMKISEI--PFMGS---PISEEKVVQVKLG 274
           FGS   + S K  EI   F+       SE KVV VKLG
Sbjct: 210 FGSSRTENSRKPGEIGDGFLEREEVKSSEMKVVPVKLG 247


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