BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00040446
         (943 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16226.3| unnamed protein product [Vitis vinifera]              468   e-129
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   468   e-129
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao...   456   e-126
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s...   434   e-119
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr...   434   e-119
ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, part...   424   e-116
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [...   412   e-112
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...   405   e-111
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas...   404   e-110
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   400   e-109
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   399   e-109
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s...   379   e-103
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s...   378   e-102
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s...   375   e-101
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s...   375   e-101
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s...   375   e-101
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus...   374   e-101
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family...   371   e-100
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S...   370   e-100
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s...   370   e-100

>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  468 bits (1204), Expect = e-129
 Identities = 236/322 (73%), Positives = 272/322 (84%), Gaps = 9/322 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H GYL L LPV+NVGY S+I+DILK ICKSC+R+LL EK  +DYLKKMRS KME+L+K+ 
Sbjct: 86   HCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAE 145

Query: 761  LAKQIVKKCKPT--------CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAIS 606
            L K+IV+KC           C RCGY+NG VKKA S+LGIIHDRSKI DG+ EEC SAIS
Sbjct: 146  LMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLGIIHDRSKIADGSLEECSSAIS 205

Query: 605  HIKESKASFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSV 426
            H KESKASF VV +LNPV+VLSLF+RM+DEDC+LL L +RPEKL++T+I VPPI+IRPSV
Sbjct: 206  HTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSV 265

Query: 425  FMDAG-RSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVR 249
            FMD G +SNE+D+T RL  II  NASL Q+LQ T  TSKCLA W+ LQIEVAQYINSDVR
Sbjct: 266  FMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVR 325

Query: 248  GVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM 69
            GVP +MQ A+PL GF+QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM
Sbjct: 326  GVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM 385

Query: 68   AQILTYPERVSNHNIEKLRQCV 3
            A+IL+YPERVS+HNIEKLRQC+
Sbjct: 386  AKILSYPERVSHHNIEKLRQCI 407


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  468 bits (1204), Expect = e-129
 Identities = 236/322 (73%), Positives = 272/322 (84%), Gaps = 9/322 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H GYL L LPV+NVGY S+I+DILK ICKSC+R+LL EK  +DYLKKMRS KME+L+K+ 
Sbjct: 86   HCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAE 145

Query: 761  LAKQIVKKCKPT--------CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAIS 606
            L K+IV+KC           C RCGY+NG VKKA S+LGIIHDRSKI DG+ EEC SAIS
Sbjct: 146  LMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVLGIIHDRSKIADGSLEECSSAIS 205

Query: 605  HIKESKASFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSV 426
            H KESKASF VV +LNPV+VLSLF+RM+DEDC+LL L +RPEKL++T+I VPPI+IRPSV
Sbjct: 206  HTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSV 265

Query: 425  FMDAG-RSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVR 249
            FMD G +SNE+D+T RL  II  NASL Q+LQ T  TSKCLA W+ LQIEVAQYINSDVR
Sbjct: 266  FMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVR 325

Query: 248  GVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM 69
            GVP +MQ A+PL GF+QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM
Sbjct: 326  GVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM 385

Query: 68   AQILTYPERVSNHNIEKLRQCV 3
            A+IL+YPERVS+HNIEKLRQC+
Sbjct: 386  AKILSYPERVSHHNIEKLRQCI 407


>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
            gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
            [Theobroma cacao]
          Length = 1395

 Score =  456 bits (1172), Expect = e-126
 Identities = 234/321 (72%), Positives = 266/321 (82%), Gaps = 8/321 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GYL+L LPV+NVGY S+I+DILK ICKSC+RI+L EKL +DYLK+MRS K+++L+K  
Sbjct: 84   HYGYLSLALPVYNVGYLSTILDILKCICKSCSRIILDEKLCKDYLKRMRSPKIDALKKGD 143

Query: 761  LAKQIVKKCKPT-------CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISH 603
            + K IVKKC          C RCGYVNG VKKA +MLGIIHDRSKI D + EE +SAISH
Sbjct: 144  IMKSIVKKCSAMASSKAVKCWRCGYVNGTVKKAVAMLGIIHDRSKINDNSLEEFRSAISH 203

Query: 602  IKESKASFHVV-HLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSV 426
             KESKASF+V  ++LNPV+VLSLF+RM D DCELLYL DRPEKLIIT+IAVPPI IRPSV
Sbjct: 204  TKESKASFNVATYVLNPVKVLSLFKRMTDLDCELLYLSDRPEKLIITNIAVPPIPIRPSV 263

Query: 425  FMDAGRSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRG 246
             MD  +SNE+DIT RL  II  NASLRQ+L  T    KCL  WE+LQ+EVAQYINSDVRG
Sbjct: 264  IMDGSQSNENDITERLKRIIQANASLRQELVETNAAFKCLGGWEMLQVEVAQYINSDVRG 323

Query: 245  VPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA 66
            VP SMQ +KPL GF+QR+KGK GRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA
Sbjct: 324  VPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMA 383

Query: 65   QILTYPERVSNHNIEKLRQCV 3
            +ILTYPERVSNHNIEKLRQCV
Sbjct: 384  RILTYPERVSNHNIEKLRQCV 404


>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            rpc1-like isoform X2 [Citrus sinensis]
          Length = 1404

 Score =  434 bits (1116), Expect = e-119
 Identities = 224/320 (70%), Positives = 261/320 (81%), Gaps = 7/320 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GYL L LPV+NVGY S+I+DILK ICK C+R+LL EKL +DYLKKMR+ KME+L+K+ 
Sbjct: 93   HYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTD 152

Query: 761  LAKQIVKKCKPT------CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISHI 600
            L K IVKKC         C RCGY+NG VKKA ++LGIIHDRSK+ +   +E  SAI+H 
Sbjct: 153  LMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESL-QEFASAITHT 211

Query: 599  KESKASFHVV-HLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSVF 423
            KESKA+ +V  ++LNPV VL LF+RM D DCE+LYL +RPEKLIIT+IAVPPI+IRPSV 
Sbjct: 212  KESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVI 271

Query: 422  MDAGRSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRGV 243
            MD  +SNE+DIT RL  II TNASL+Q+L       K LA WE LQ+EVAQYINSDVRGV
Sbjct: 272  MDGSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGV 331

Query: 242  PSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQ 63
            P SMQ A+PL GF+QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA+
Sbjct: 332  PFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMAR 391

Query: 62   ILTYPERVSNHNIEKLRQCV 3
            ILTYPERVS+HNIEKLRQC+
Sbjct: 392  ILTYPERVSDHNIEKLRQCI 411


>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
            gi|557526635|gb|ESR37941.1| hypothetical protein
            CICLE_v10027681mg [Citrus clementina]
          Length = 1397

 Score =  434 bits (1116), Expect = e-119
 Identities = 224/320 (70%), Positives = 261/320 (81%), Gaps = 7/320 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GYL L LPV+NVGY S+I+DILK ICK C+R+LL EKL +DYLKKMR+ KME+L+K+ 
Sbjct: 108  HYGYLTLALPVYNVGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTD 167

Query: 761  LAKQIVKKCKPT------CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISHI 600
            L K IVKKC         C RCGY+NG VKKA ++LGIIHDRSK+ +   +E  SAI+H 
Sbjct: 168  LMKSIVKKCSTMASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESL-QEFASAITHT 226

Query: 599  KESKASFHVV-HLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSVF 423
            KESKA+ +V  ++LNPV VL LF+RM D DCE+LYL +RPEKLIIT+IAVPPI+IRPSV 
Sbjct: 227  KESKAAVNVATYILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVI 286

Query: 422  MDAGRSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRGV 243
            MD  +SNE+DIT RL  II TNASL+Q+L       K LA WE LQ+EVAQYINSDVRGV
Sbjct: 287  MDGSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGV 346

Query: 242  PSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQ 63
            P SMQ A+PL GF+QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA+
Sbjct: 347  PFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMAR 406

Query: 62   ILTYPERVSNHNIEKLRQCV 3
            ILTYPERVS+HNIEKLRQC+
Sbjct: 407  ILTYPERVSDHNIEKLRQCI 426


>ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
            gi|462403787|gb|EMJ09344.1| hypothetical protein
            PRUPE_ppa024521mg, partial [Prunus persica]
          Length = 867

 Score =  424 bits (1089), Expect = e-116
 Identities = 216/322 (67%), Positives = 258/322 (80%), Gaps = 9/322 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            HFG+L L LPV NVGY S+++DILK ICK C+ ILL E +R D+LKKMRS KME L+K+ 
Sbjct: 94   HFGFLVLALPVLNVGYLSTVVDILKCICKLCSGILLEEGMRNDFLKKMRSPKMEPLRKTE 153

Query: 761  LAKQIVKKC-------KPT-CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAIS 606
            L K+IVKKC       +P  C +CG++NG VKKA  +LGIIHDRSK+ +G  ++ ++ +S
Sbjct: 154  LMKKIVKKCNNLTTNYRPVKCSKCGFINGSVKKAVGVLGIIHDRSKL-NGVMDDFRTTLS 212

Query: 605  HIKESKASFHVV-HLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPS 429
            H KESKASF+V  H+LNP R+ SLF+RM+DEDCELL L +RP+ LII +IAVPPI+IRPS
Sbjct: 213  HTKESKASFNVATHMLNPARIYSLFKRMVDEDCELLNLSNRPQNLIIKNIAVPPIAIRPS 272

Query: 428  VFMDAGRSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVR 249
            V +D   SNE+DIT RL  II +NA LR+DL       KCLA W++LQ+EVAQYINSD+R
Sbjct: 273  VIVDRSLSNENDITERLKRIIQSNAILRRDLLEAKSAPKCLASWDILQVEVAQYINSDIR 332

Query: 248  GVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM 69
            GVP SMQ AKPL GF+QRLKGK GRFRGNLSGKRVEYTGRTVISPDPNLKITEV +PI M
Sbjct: 333  GVPFSMQTAKPLSGFVQRLKGKGGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGVPIKM 392

Query: 68   AQILTYPERVSNHNIEKLRQCV 3
            AQILTYPERVS+HNIEKLRQCV
Sbjct: 393  AQILTYPERVSHHNIEKLRQCV 414


>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1394

 Score =  412 bits (1058), Expect = e-112
 Identities = 215/322 (66%), Positives = 255/322 (79%), Gaps = 9/322 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            HFGYLNLVLPV+NVGY S+I+DILK ICKSC+R+L+ EKLR+ YLK+MR+ + E L+K+ 
Sbjct: 89   HFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEKLRKSYLKRMRNPRTEPLKKNE 148

Query: 761  LAKQIVKKCKPT-------CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISH 603
            L K+IVKKC          C RCGY+NG VKKAGS++GIIHDRSK++DG  EECKSAI H
Sbjct: 149  LMKEIVKKCSSMASSKAVKCLRCGYMNGMVKKAGSVVGIIHDRSKLIDGYLEECKSAIGH 208

Query: 602  IKESKASFHVV-HLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSV 426
             +E++A   +  ++LNPVRVLSLF+RM++EDCELLYL  RPEKLIIT IAVPPISIRPSV
Sbjct: 209  TREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQGRPEKLIITTIAVPPISIRPSV 268

Query: 425  FMDAGRSNEDDITSRLSTIIATNASLRQDLQCTAPTS-KCLADWELLQIEVAQYINSDVR 249
            F +  +SNE+DIT RL  II  NA LR +L     T  K L  W+ LQ  V  YINSDVR
Sbjct: 269  FTEGSQSNENDITERLKQIIQFNAKLRLELLEGRRTGIKYLIGWDELQAVVTLYINSDVR 328

Query: 248  GVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM 69
             +P  MQ  +PL GF+QRL GKQGRFR NL+GKRVE+TGRTVISPDPNLKITEVAIPI M
Sbjct: 329  -IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEFTGRTVISPDPNLKITEVAIPIHM 387

Query: 68   AQILTYPERVSNHNIEKLRQCV 3
            A+ILTYPERV++HNIEKLRQCV
Sbjct: 388  ARILTYPERVTHHNIEKLRQCV 409


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score =  405 bits (1042), Expect = e-111
 Identities = 216/322 (67%), Positives = 258/322 (80%), Gaps = 9/322 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            HFGYLNLVLPVFNVGY S+I+DILK ICKSC+RIL  EKL +  LKKMR+ ++E L+KS 
Sbjct: 60   HFGYLNLVLPVFNVGYMSNILDILKCICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSE 119

Query: 761  LAKQIVKKCKPT-------CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISH 603
            L K+IVKKC          C RCG +NG VKKAGS+L IIHDR+K+VDG  EEC+SAI+H
Sbjct: 120  LVKKIVKKCSSMTSNKAVKCTRCGDMNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAH 179

Query: 602  IKESKASFHVV-HLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSV 426
             KES+A   +  ++L PV+VLSLF+R+ +EDCE+L L+DRPEKLIIT+IAVPPISIRPSV
Sbjct: 180  TKESRAPISLATYILTPVKVLSLFKRIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSV 239

Query: 425  FMDAGRSNEDDITSRLSTIIATNASLRQDL-QCTAPTSKCLADWELLQIEVAQYINSDVR 249
            F D  +SNE+DIT RL  II  NASLR +L +     +K L  W+ LQ  VA Y+NSDVR
Sbjct: 240  FTDGLQSNENDITERLKQIIQANASLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR 299

Query: 248  GVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM 69
             VP++++  KPL GF+QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPI M
Sbjct: 300  -VPNNVEVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHM 358

Query: 68   AQILTYPERVSNHNIEKLRQCV 3
            A+IL+YPERVS+HNIEKLRQ V
Sbjct: 359  ARILSYPERVSHHNIEKLRQLV 380


>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
            gi|561005141|gb|ESW04135.1| hypothetical protein
            PHAVU_011G070100g [Phaseolus vulgaris]
          Length = 1392

 Score =  404 bits (1037), Expect = e-110
 Identities = 211/317 (66%), Positives = 248/317 (78%), Gaps = 4/317 (1%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GYLNL LPVFNVGY  SI++ILK ICK CARILL E  R+ +LKKMRSSK   L K  
Sbjct: 90   HYGYLNLALPVFNVGYLGSIVEILKCICKGCARILLDEDTRKKHLKKMRSSKKSELDKMD 149

Query: 761  LAK-QIVKKCKPT--CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISHIKES 591
              K +I+K C     C RCGY+NG VKK  + L I+HD SK  +   EE +S +S IK+S
Sbjct: 150  FVKVRIIKDCSKVVNCPRCGYINGSVKKLPASLIIMHDCSKCKNNIVEELESTLSRIKDS 209

Query: 590  KASFHVVH-LLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSVFMDA 414
            KA+ +V + +LNP +VLSLFR+MLDEDCELLY+ +RPEKLIIT+I VPPI+IRPSV MD 
Sbjct: 210  KATANVSNRILNPFQVLSLFRKMLDEDCELLYVAERPEKLIITNIVVPPIAIRPSVVMDE 269

Query: 413  GRSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRGVPSS 234
              SNE+DIT RL  II  NA LRQ+LQ ++ +SK L  WE+LQ EVAQ+INS+VRG+P  
Sbjct: 270  SLSNENDITERLKNIIQANAVLRQELQESSVSSKFLDGWEILQNEVAQFINSEVRGIPFY 329

Query: 233  MQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILT 54
            MQ  K L GF+QRLKGK GRFRGNLSGKRVEYTGRTVISPDPNLKI+EVAIPILMA ILT
Sbjct: 330  MQSTKQLAGFVQRLKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPILMASILT 389

Query: 53   YPERVSNHNIEKLRQCV 3
            YPERV++HNIEKLRQCV
Sbjct: 390  YPERVTHHNIEKLRQCV 406


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score =  400 bits (1029), Expect = e-109
 Identities = 208/317 (65%), Positives = 249/317 (78%), Gaps = 4/317 (1%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GYLNL LPVFNVGY S+I++ILK ICK CARILL E  R+ +LKKMRSSK   L K  
Sbjct: 90   HYGYLNLALPVFNVGYLSTIVEILKCICKGCARILLDEDTRKKHLKKMRSSKKSELDKID 149

Query: 761  LAK-QIVKKCKPT--CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISHIKES 591
              K +++K C     C RCGY+NG VKK  + L IIHD SK  +   EE  SA+S +K+S
Sbjct: 150  FVKVRVIKDCSKVVNCPRCGYINGSVKKLPASLTIIHDCSKCRNYIVEELDSALSRMKDS 209

Query: 590  KASFHVVH-LLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSVFMDA 414
            +A+ +V + +LNP +VLSLF+RMLDEDCELLY+ +RPEKLI+T++ VPPI+IRPSV MD 
Sbjct: 210  RATTNVSNRILNPFQVLSLFKRMLDEDCELLYVAERPEKLIMTNVVVPPIAIRPSVVMDE 269

Query: 413  GRSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRGVPSS 234
              SNE+DIT RL  II  NA LRQ+LQ +  +SK L  W++LQ EVAQ+INSDVRG+P  
Sbjct: 270  SLSNENDITERLKNIIQANAVLRQELQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFY 329

Query: 233  MQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILT 54
            MQP K L GF+QRLKGK GRFRGNLSGKRVEYTGRTVISPDPNLKI+EVAIPI MA+ILT
Sbjct: 330  MQPTKQLAGFVQRLKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILT 389

Query: 53   YPERVSNHNIEKLRQCV 3
            YPERV++HNIEKLRQCV
Sbjct: 390  YPERVTHHNIEKLRQCV 406


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  399 bits (1025), Expect = e-109
 Identities = 204/322 (63%), Positives = 253/322 (78%), Gaps = 9/322 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GY+NL LPVFNVGYF++I++ILK ICKSC+RILL EKL +D+L+KMR+ K+E+L+K  
Sbjct: 90   HYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEKLFKDFLRKMRNPKLEALRKVD 149

Query: 761  LAKQIVKKCKPT--------CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAIS 606
            L K+I+KKC           C RCGY+NG VKKA SMLGI+H R++  D         +S
Sbjct: 150  LVKKIIKKCSTLTTGNKSTRCSRCGYLNGSVKKAVSMLGILHYRARSKDA------GVVS 203

Query: 605  HIKESKASFHVVH-LLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPS 429
              ++ +A ++V + +LNP RVL LF+RM DEDCELL+L +RPEKLIIT++ VPPI+IRPS
Sbjct: 204  --EDLRAPYNVSNDILNPFRVLCLFQRMSDEDCELLFLSNRPEKLIITNVLVPPIAIRPS 261

Query: 428  VFMDAGRSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVR 249
            V MD  +SNE+DIT RL  II  NAS+ Q+L  +   +KCL  W++LQ EVAQ INSDVR
Sbjct: 262  VIMDGSQSNENDITERLKRIIQQNASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVR 321

Query: 248  GVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM 69
            G+P SMQ +KPL GF+QRLKGKQGRFRGNL GKRVE+TGRTVISPDPNLKITEVA+PI M
Sbjct: 322  GIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHM 381

Query: 68   AQILTYPERVSNHNIEKLRQCV 3
            A+ILTYPERV+ HNIEKLRQCV
Sbjct: 382  ARILTYPERVTRHNIEKLRQCV 403


>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
            lycopersicum]
          Length = 1390

 Score =  379 bits (973), Expect = e-103
 Identities = 206/323 (63%), Positives = 243/323 (75%), Gaps = 10/323 (3%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GYL L LPV+NVGY  +++DILK ICK C+ ILL +K RRD LKKMR+ + E L+KS 
Sbjct: 89   HYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSE 148

Query: 761  LAKQIVKKCKP--------TCHRCGYVNGGVKKAGSMLGIIHDR-SKIVDGTWEECKSAI 609
            L K++VK+C          TC +CGY+NG VKK    L I H++ ++I+D    E   AI
Sbjct: 149  LHKRVVKRCNAMAGGQKTATCSKCGYMNGMVKKL--QLKITHEQGNRILD----EINVAI 202

Query: 608  SHIKESKASFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPS 429
            S  +E +AS  V   ++P  V SLF+ M DEDCELLYL DRPEKL++T I VPPI+IRPS
Sbjct: 203  SDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPS 262

Query: 428  VFMDAG-RSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDV 252
            VF+D G +SNE+DIT RL  II  NASL Q++  ++P  K L  W  LQ+EVAQYINSDV
Sbjct: 263  VFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV-KSLNQWIDLQMEVAQYINSDV 321

Query: 251  RGVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIL 72
            RGVP  MQP +PL GF QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIL
Sbjct: 322  RGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIL 381

Query: 71   MAQILTYPERVSNHNIEKLRQCV 3
            MAQILTYPERVS HNIEKLRQCV
Sbjct: 382  MAQILTYPERVSQHNIEKLRQCV 404


>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
            [Brachypodium distachyon]
          Length = 1392

 Score =  378 bits (971), Expect = e-102
 Identities = 199/315 (63%), Positives = 240/315 (76%), Gaps = 2/315 (0%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            HFGYL LVLPVFNVG+F++I+D+LKSICK C+RILL EK +R++LKKMR+ ++E L K+ 
Sbjct: 89   HFGYLKLVLPVFNVGFFNNILDVLKSICKGCSRILLHEKDQREFLKKMRNPRLEPLHKAA 148

Query: 761  LAKQIVKKCKPT-CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISHIKESKA 585
            L K++  KCK + C  CGY+NG  KK    L I+HD SK +DG+ EE +SA+SH KE K 
Sbjct: 149  LMKKVRDKCKLSRCPSCGYINGVAKKGRPGLLIVHDCSKTLDGSTEELRSALSHKKE-KL 207

Query: 584  SFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSVFMDAGR- 408
            S   VH L+P  VLSLF+RM DEDCELL L DRPEKLIIT+IAVPP+ IRPSVF+  GR 
Sbjct: 208  SISSVHTLDPATVLSLFKRMTDEDCELLNLGDRPEKLIITEIAVPPVPIRPSVFVGGGRM 267

Query: 407  SNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRGVPSSMQ 228
            SNED IT  L  I+ TN+ L+  LQ   P  KC   W+LLQ++V +YINSD    PS   
Sbjct: 268  SNEDGITCILRNIVNTNSILKGILQNGDPLMKCFDCWQLLQLQVVEYINSDA---PSLTD 324

Query: 227  PAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYP 48
            P    RG +QRLKGK GRFRGNLSGKR EYTGRTVISPDPNL+ITEVAIP+LMA++LTYP
Sbjct: 325  PQN--RGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYP 382

Query: 47   ERVSNHNIEKLRQCV 3
            ERVS +NIEKLRQC+
Sbjct: 383  ERVSYYNIEKLRQCI 397


>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
            brachyantha]
          Length = 1389

 Score =  375 bits (964), Expect = e-101
 Identities = 194/315 (61%), Positives = 238/315 (75%), Gaps = 2/315 (0%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            HFGYL L LPVFNVG+F+ I+D+LK ICK C+R+LL EK R ++LKKMR+ K + LQKS 
Sbjct: 89   HFGYLKLALPVFNVGFFNCILDVLKCICKGCSRVLLVEKDRLEFLKKMRNPKADPLQKSA 148

Query: 761  LAKQIVKKCKPT-CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISHIKESKA 585
            + K++  KCK + C  CG++NG  KK  + L I+HD SK +DG+ EE K A+SH KE K 
Sbjct: 149  IMKKVRDKCKLSRCPWCGFINGVAKKGRAGLIILHDCSKTLDGSTEELKEALSHKKE-KL 207

Query: 584  SFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSVFMDAGR- 408
            SF  VH+L+P  VLSLF+RM DEDCELL L DRPEKLI+T+IAVPP+ IRPSVF+  GR 
Sbjct: 208  SFSAVHMLDPATVLSLFKRMTDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRM 267

Query: 407  SNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRGVPSSMQ 228
            SNED IT  L +I  TN+ L+++LQ      KC   W+ LQ++V +YINSD   +P S  
Sbjct: 268  SNEDSITVILKSIANTNSILKENLQTGGQFMKCFDCWQHLQLQVVEYINSDAPSLPESQH 327

Query: 227  PAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYP 48
                 RG +QRLKGK GRFRGNLSGKR EYTGRTVISPDPNL+ITEVAIPILMA++LTYP
Sbjct: 328  -----RGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPILMARVLTYP 382

Query: 47   ERVSNHNIEKLRQCV 3
            ERVS +NIEKLRQC+
Sbjct: 383  ERVSYYNIEKLRQCI 397


>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X2 [Solanum tuberosum]
          Length = 1243

 Score =  375 bits (962), Expect = e-101
 Identities = 206/323 (63%), Positives = 242/323 (74%), Gaps = 10/323 (3%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GYL L LPV+NVGY  +++DILK ICK C+ ILL +K RRD LKKMR+ + E L+KS 
Sbjct: 89   HYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSE 148

Query: 761  LAKQIVKKCKP--------TCHRCGYVNGGVKKAGSMLGIIHDR-SKIVDGTWEECKSAI 609
            L K++VK+C          TC +CGY+NG VKK    L I H++ ++I+D    E   AI
Sbjct: 149  LHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKL--QLKITHEQGNRILD----EINVAI 202

Query: 608  SHIKESKASFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPS 429
            S  +E +AS  V   L+P  V SLF+ M DEDCELLYL DRPEKL++T I VPPI+IRPS
Sbjct: 203  SDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPS 262

Query: 428  VFMDAG-RSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDV 252
            VF+D G +SNE+DIT RL  II  NASL Q++  ++P  K L  W  LQ+EVAQYINSDV
Sbjct: 263  VFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV-KSLNLWIDLQMEVAQYINSDV 321

Query: 251  RGVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIL 72
            RGVP  MQ  +PL GF QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIL
Sbjct: 322  RGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIL 381

Query: 71   MAQILTYPERVSNHNIEKLRQCV 3
            MAQILTYPERVS HNIEKLRQCV
Sbjct: 382  MAQILTYPERVSQHNIEKLRQCV 404


>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
            X1 [Solanum tuberosum]
          Length = 1394

 Score =  375 bits (962), Expect = e-101
 Identities = 206/323 (63%), Positives = 242/323 (74%), Gaps = 10/323 (3%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GYL L LPV+NVGY  +++DILK ICK C+ ILL +K RRD LKKMR+ + E L+KS 
Sbjct: 89   HYGYLVLALPVYNVGYLGTVVDILKCICKCCSSILLDDKERRDILKKMRNPRTEFLKKSE 148

Query: 761  LAKQIVKKCKP--------TCHRCGYVNGGVKKAGSMLGIIHDR-SKIVDGTWEECKSAI 609
            L K++VK+C          TC +CGY+NG VKK    L I H++ ++I+D    E   AI
Sbjct: 149  LHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKL--QLKITHEQGNRILD----EINVAI 202

Query: 608  SHIKESKASFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPS 429
            S  +E +AS  V   L+P  V SLF+ M DEDCELLYL DRPEKL++T I VPPI+IRPS
Sbjct: 203  SDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPS 262

Query: 428  VFMDAG-RSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDV 252
            VF+D G +SNE+DIT RL  II  NASL Q++  ++P  K L  W  LQ+EVAQYINSDV
Sbjct: 263  VFVDGGTQSNENDITERLKRIIQANASLHQEMSDSSPV-KSLNLWIDLQMEVAQYINSDV 321

Query: 251  RGVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIL 72
            RGVP  MQ  +PL GF QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIL
Sbjct: 322  RGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIL 381

Query: 71   MAQILTYPERVSNHNIEKLRQCV 3
            MAQILTYPERVS HNIEKLRQCV
Sbjct: 382  MAQILTYPERVSQHNIEKLRQCV 404


>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
          Length = 1394

 Score =  374 bits (961), Expect = e-101
 Identities = 192/322 (59%), Positives = 241/322 (74%), Gaps = 9/322 (2%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            H+GYL L LPV+NVG+F +IIDILK ICK+C+R+LL +K  + +LK+MR+ K E+L+K  
Sbjct: 88   HYGYLPLALPVYNVGFFLTIIDILKCICKNCSRVLLADKDHQVFLKQMRNPKCETLKKIE 147

Query: 761  LAKQIVKKCKPT--------CHRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAIS 606
            + K++VKKC           C RCGY+NG VKKA   L I HDR+K+VD   +E +SA++
Sbjct: 148  IQKRVVKKCNSLAGSKRAVKCSRCGYINGMVKKAKEPLKIQHDRAKVVDNCLDERRSALA 207

Query: 605  HIKESKASFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSV 426
            H K+ K +  V+  ++P     L   MLDEDCELLYL DRPEKLI+T+I VPPI+IRPSV
Sbjct: 208  HTKDIKGNPVVISTIDPKTAYHLLENMLDEDCELLYLHDRPEKLIVTNILVPPIAIRPSV 267

Query: 425  FMDAGRSNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLAD-WELLQIEVAQYINSDVR 249
            F     SNE+DITSRL  II  NA++ Q++   +  S+ L + W+ LQ+EVAQYINSDVR
Sbjct: 268  FSTRAMSNENDITSRLKQIIQINAAVLQEMSDQSSQSQSLTNNWDSLQVEVAQYINSDVR 327

Query: 248  GVPSSMQPAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILM 69
                  +  KPL GF+QRLKGKQGRFRGNLSGKRVE+TGRTVISPDPNLKI EVA+PILM
Sbjct: 328  VPLQYSENTKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKINEVAVPILM 387

Query: 68   AQILTYPERVSNHNIEKLRQCV 3
            AQIL+YPERVS+HNIE+LRQCV
Sbjct: 388  AQILSYPERVSHHNIERLRQCV 409


>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
          Length = 1030

 Score =  371 bits (953), Expect = e-100
 Identities = 191/315 (60%), Positives = 239/315 (75%), Gaps = 2/315 (0%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            HFGYL L LPVFNVG+F+ I+D+LK ICKSC+R+LL EK RR++LKKMR+ + ++LQKS 
Sbjct: 89   HFGYLKLALPVFNVGFFNCILDVLKCICKSCSRVLLIEKDRREFLKKMRNPRADALQKSA 148

Query: 761  LAKQIVKKCKPTC-HRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISHIKESKA 585
              K++  KCK +C  RC Y NG VKK  + L ++HD SK++DG  EE K+A+ + KE K 
Sbjct: 149  TMKKVRDKCKLSCCPRCDYRNGVVKKGRAGLIVVHDCSKVLDGHTEELKNALQNKKE-KV 207

Query: 584  SFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSVFMDAGR- 408
            S   V +L+P  VLSLFRRM+DEDCELL L DRPEKLI+T+IAVPP+ IRPSV +   R 
Sbjct: 208  SASSVLVLDPATVLSLFRRMIDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVVVGNSRT 267

Query: 407  SNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRGVPSSMQ 228
            SNED IT  L +I+ TN+ L++ L    P +KC   W+ LQ++V +Y+NSD   +P S  
Sbjct: 268  SNEDSITVILKSIVNTNSILKETLHTGGPFTKCFDCWQYLQLQVVEYVNSDAPSLPESQH 327

Query: 227  PAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYP 48
                 RG +QRLKGK GRFRGNLSGKR EYTGRTVISPDPNLKITEVAIP+LMA++LTYP
Sbjct: 328  -----RGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLKITEVAIPVLMARVLTYP 382

Query: 47   ERVSNHNIEKLRQCV 3
            ERVSN+NIEKLRQC+
Sbjct: 383  ERVSNYNIEKLRQCI 397


>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
            gi|241937900|gb|EES11045.1| hypothetical protein
            SORBIDRAFT_06g021120 [Sorghum bicolor]
          Length = 1391

 Score =  370 bits (950), Expect = e-100
 Identities = 190/315 (60%), Positives = 240/315 (76%), Gaps = 2/315 (0%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            HFGYL L LPVFNVG+F+ I+D+LK ICKSC+R+LL EK RR++LKKMR+ + ++LQKS 
Sbjct: 89   HFGYLKLALPVFNVGFFNCILDVLKCICKSCSRVLLFEKDRREFLKKMRNPRADALQKSA 148

Query: 761  LAKQIVKKCKPTC-HRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISHIKESKA 585
              K++  KCK +C  RC Y NG VKK  + L ++HD SK++DG  EE K+A+ + KE K 
Sbjct: 149  TMKKVRDKCKLSCCPRCDYRNGVVKKGRAGLIVVHDCSKVLDGHTEELKNALQNKKE-KV 207

Query: 584  SFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSVFMDAGR- 408
            S + V +L+P  VLSLFRRM DEDCELL L DRPEKLI+++IAVPP+ IRPSV + + R 
Sbjct: 208  SANSVRVLDPATVLSLFRRMTDEDCELLNLGDRPEKLIVSEIAVPPVPIRPSVVVGSSRT 267

Query: 407  SNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRGVPSSMQ 228
            SNED IT  L +I+ TN+ L++ L    P +KC   W+ LQ++V +Y+NSD   +P S  
Sbjct: 268  SNEDSITVILKSIVNTNSILKETLHTGGPFTKCFDCWQYLQLQVVEYVNSDAPCLPDSQH 327

Query: 227  PAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYP 48
                 RG +QRLKGK GRFRGNLSGKR EYTGRTVISPDPNLKITEVAIP+LMA++LTYP
Sbjct: 328  -----RGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLKITEVAIPVLMARVLTYP 382

Query: 47   ERVSNHNIEKLRQCV 3
            ERVSN+NIEKLRQC+
Sbjct: 383  ERVSNYNIEKLRQCI 397


>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
            italica]
          Length = 1397

 Score =  370 bits (949), Expect = e-100
 Identities = 191/315 (60%), Positives = 238/315 (75%), Gaps = 2/315 (0%)
 Frame = -3

Query: 941  HFGYLNLVLPVFNVGYFSSIIDILKSICKSCARILLPEKLRRDYLKKMRSSKMESLQKSG 762
            HFGYL L LPVFNVG+F+ I+D+LK ICK C+R+LL EK RR++LKKMR+ + ++LQKS 
Sbjct: 92   HFGYLKLALPVFNVGFFNCILDVLKCICKGCSRVLLAEKDRREFLKKMRNPRADALQKSA 151

Query: 761  LAKQIVKKCKPTC-HRCGYVNGGVKKAGSMLGIIHDRSKIVDGTWEECKSAISHIKESKA 585
            + K++  KCK TC  RC Y NG VKK    L +IHD SKI+DG  EE K+A+ H KE K 
Sbjct: 152  IMKKVRDKCKLTCCPRCEYKNGVVKKGRVGLIVIHDCSKILDGHTEELKNALQHKKE-KV 210

Query: 584  SFHVVHLLNPVRVLSLFRRMLDEDCELLYLWDRPEKLIITDIAVPPISIRPSVFMDAGR- 408
            S   V +L+P   LSLFRRM+DEDCELL L DRPEKLI+T+IAVPP+ IRPSV +   R 
Sbjct: 211  STSSVRMLDPATALSLFRRMVDEDCELLNLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRT 270

Query: 407  SNEDDITSRLSTIIATNASLRQDLQCTAPTSKCLADWELLQIEVAQYINSDVRGVPSSMQ 228
            SNED IT+ L +I+ TN+ L++ LQ     SKC   W+ LQ++V +++NSD   +P S  
Sbjct: 271  SNEDSITAILKSIVNTNSILKETLQTGGLFSKCFDCWQQLQLQVVEFVNSDAPCLPESQH 330

Query: 227  PAKPLRGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYP 48
                 RG +QRLKGK GRFRGNLSGKR EYTGRTVISPDPNL+ITEVAIP+LMA++LTYP
Sbjct: 331  -----RGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYP 385

Query: 47   ERVSNHNIEKLRQCV 3
            ERVSN+N+EKLRQC+
Sbjct: 386  ERVSNYNLEKLRQCI 400