BLASTX nr result
ID: Akebia23_contig00037810
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia23_contig00037810 (463 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABV01917.1| putative RNA-dependent RNA polymerase [Tobacco bu... 72 6e-11 gb|AAB82543.1| putative RNA dependent RNA polymerase [carrot red... 61 1e-07 ref|NP_624318.1| putative RNA dependent RNA polymerase [Carrot r... 60 3e-07 >gb|ABV01917.1| putative RNA-dependent RNA polymerase [Tobacco bushy top disease-associated RNA] Length = 788 Score = 72.4 bits (176), Expect = 6e-11 Identities = 37/100 (37%), Positives = 51/100 (51%) Frame = +3 Query: 162 GYTAPAVKHEGVPGLSPYTANPRPTKTEVCVYKVDGPSFGCGVKYFNNDAVNLRRGLVNR 341 GY VPGL P P ++ PS+ GV YFNN NL RGLVNR Sbjct: 270 GYEHDMPDLTNVPGLDPRQLRPSIVXYNKEFRRIVAPSYNYGVTYFNNSRANLLRGLVNR 329 Query: 342 VLSYKGGPVLKPKNGFWSRMESTAIRMSLPYAVARLSDED 461 VL+YKGGP+L+P G W + A ++ + + +S ++ Sbjct: 330 VLTYKGGPILEPSPGSWRSLSPLARKIGIRCRTSPMSPDE 369 >gb|AAB82543.1| putative RNA dependent RNA polymerase [carrot red leaf luteovirus associated RNA] Length = 757 Score = 61.2 bits (147), Expect = 1e-07 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Frame = +3 Query: 159 QGYTAPAVKHEGVPGLSPYTANPRPTKTEVCVYKVDGP-SFGCGVKYFNNDAVNLRRGLV 335 +G+T AV + VPGL T+ + +V GP S + ++ N NL RGLV Sbjct: 236 RGFTHDAVCTD-VPGLDATNLGDSRPLTDTNIRRVVGPFSSDYDIVFYTNSRNNLMRGLV 294 Query: 336 NRVLSYKGGPVLKPKNGFWSRMESTAIRMSLPYAVARLSDED 461 NRVL+YKGGPVL+P G W + A + LS E+ Sbjct: 295 NRVLTYKGGPVLEPSPGAWKSLRGLATSLGNRCLTTPLSPEE 336 >ref|NP_624318.1| putative RNA dependent RNA polymerase [Carrot red leaf luteovirus associated RNA] gi|2582376|gb|AAB82546.1| putative RNA dependent RNA polymerase [carrot red leaf luteovirus associated RNA] Length = 757 Score = 60.1 bits (144), Expect = 3e-07 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Frame = +3 Query: 159 QGYTAPAVKHEGVPGLSPYTANPRPTKTEVCVYKVDGP-SFGCGVKYFNNDAVNLRRGLV 335 +G+T AV + VPGL T+ + +V GP S + ++ N NL RGLV Sbjct: 236 RGFTHEAVCTD-VPGLDATNLGDSRPLTDTNIRRVVGPVSSDYDIVFYTNSRNNLMRGLV 294 Query: 336 NRVLSYKGGPVLKPKNGFWSRMESTAIRMSLPYAVARLSDED 461 NRVL+YKGGPVL+P G W + A + LS ++ Sbjct: 295 NRVLTYKGGPVLEPSPGAWKSLRGLATSLGNRCLTTPLSPDE 336