BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia23_contig00037810
         (463 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV01917.1| putative RNA-dependent RNA polymerase [Tobacco bu...    72   6e-11
gb|AAB82543.1| putative RNA dependent RNA polymerase [carrot red...    61   1e-07
ref|NP_624318.1| putative RNA dependent RNA polymerase [Carrot r...    60   3e-07

>gb|ABV01917.1| putative RNA-dependent RNA polymerase [Tobacco bushy top
           disease-associated RNA]
          Length = 788

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 37/100 (37%), Positives = 51/100 (51%)
 Frame = +3

Query: 162 GYTAPAVKHEGVPGLSPYTANPRPTKTEVCVYKVDGPSFGCGVKYFNNDAVNLRRGLVNR 341
           GY         VPGL P    P          ++  PS+  GV YFNN   NL RGLVNR
Sbjct: 270 GYEHDMPDLTNVPGLDPRQLRPSIVXYNKEFRRIVAPSYNYGVTYFNNSRANLLRGLVNR 329

Query: 342 VLSYKGGPVLKPKNGFWSRMESTAIRMSLPYAVARLSDED 461
           VL+YKGGP+L+P  G W  +   A ++ +    + +S ++
Sbjct: 330 VLTYKGGPILEPSPGSWRSLSPLARKIGIRCRTSPMSPDE 369


>gb|AAB82543.1| putative RNA dependent RNA polymerase [carrot red leaf luteovirus
           associated RNA]
          Length = 757

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
 Frame = +3

Query: 159 QGYTAPAVKHEGVPGLSPYTANPRPTKTEVCVYKVDGP-SFGCGVKYFNNDAVNLRRGLV 335
           +G+T  AV  + VPGL           T+  + +V GP S    + ++ N   NL RGLV
Sbjct: 236 RGFTHDAVCTD-VPGLDATNLGDSRPLTDTNIRRVVGPFSSDYDIVFYTNSRNNLMRGLV 294

Query: 336 NRVLSYKGGPVLKPKNGFWSRMESTAIRMSLPYAVARLSDED 461
           NRVL+YKGGPVL+P  G W  +   A  +        LS E+
Sbjct: 295 NRVLTYKGGPVLEPSPGAWKSLRGLATSLGNRCLTTPLSPEE 336


>ref|NP_624318.1| putative RNA dependent RNA polymerase [Carrot red leaf luteovirus
           associated RNA] gi|2582376|gb|AAB82546.1| putative RNA
           dependent RNA polymerase [carrot red leaf luteovirus
           associated RNA]
          Length = 757

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
 Frame = +3

Query: 159 QGYTAPAVKHEGVPGLSPYTANPRPTKTEVCVYKVDGP-SFGCGVKYFNNDAVNLRRGLV 335
           +G+T  AV  + VPGL           T+  + +V GP S    + ++ N   NL RGLV
Sbjct: 236 RGFTHEAVCTD-VPGLDATNLGDSRPLTDTNIRRVVGPVSSDYDIVFYTNSRNNLMRGLV 294

Query: 336 NRVLSYKGGPVLKPKNGFWSRMESTAIRMSLPYAVARLSDED 461
           NRVL+YKGGPVL+P  G W  +   A  +        LS ++
Sbjct: 295 NRVLTYKGGPVLEPSPGAWKSLRGLATSLGNRCLTTPLSPDE 336